2023-04-19T08:37:29,536 Created temporary directory: /tmp/pip-ephem-wheel-cache-ju8b25ux 2023-04-19T08:37:29,538 Created temporary directory: /tmp/pip-build-tracker-kztko_dx 2023-04-19T08:37:29,539 Initialized build tracking at /tmp/pip-build-tracker-kztko_dx 2023-04-19T08:37:29,539 Created build tracker: /tmp/pip-build-tracker-kztko_dx 2023-04-19T08:37:29,539 Entered build tracker: /tmp/pip-build-tracker-kztko_dx 2023-04-19T08:37:29,539 Created temporary directory: /tmp/pip-wheel-emksobax 2023-04-19T08:37:29,544 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-19T08:37:29,547 Created temporary directory: /tmp/pip-ephem-wheel-cache-jxgm87gy 2023-04-19T08:37:29,575 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-19T08:37:29,578 2 location(s) to search for versions of nngt: 2023-04-19T08:37:29,578 * https://pypi.org/simple/nngt/ 2023-04-19T08:37:29,578 * https://www.piwheels.org/simple/nngt/ 2023-04-19T08:37:29,579 Fetching project page and analyzing links: https://pypi.org/simple/nngt/ 2023-04-19T08:37:29,579 Getting page https://pypi.org/simple/nngt/ 2023-04-19T08:37:29,581 Found index url https://pypi.org/simple 2023-04-19T08:37:29,647 Fetched page https://pypi.org/simple/nngt/ as application/vnd.pypi.simple.v1+json 2023-04-19T08:37:29,675 Found link https://files.pythonhosted.org/packages/d4/c5/b906ebd42bcd83fd06aa93bee7d0ca74e68e924a64d55f0a8065080a06b6/nngt-0.9.dev1.tar.gz (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4), version: 0.9.dev1 2023-04-19T08:37:29,676 Found link https://files.pythonhosted.org/packages/3e/eb/cbaac25c605476b563f71885c04d6c62be1164c947d00436d92c566cefc9/nngt-0.9.dev2.tar.gz (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4), version: 0.9.dev2 2023-04-19T08:37:29,676 Found link https://files.pythonhosted.org/packages/0b/6b/811cdf28df1390d60d04693d58505fe6cf7a0167968bb0be799735ab2ed0/nngt-0.9.dev3.tar.gz (from https://pypi.org/simple/nngt/), version: 0.9.dev3 2023-04-19T08:37:29,677 Found link https://files.pythonhosted.org/packages/29/43/dcf9b9c68ba056ebaf2a8c5f5aac61251e6d426874bb80baa5fc4f170c97/nngt-1.0.0a1.tar.gz (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4), version: 1.0.0a1 2023-04-19T08:37:29,678 Found link https://files.pythonhosted.org/packages/c9/7d/e052c3a5265e2a9670e8fa8a872e00aa0d40860994be50526bee34d73524/nngt-1.0.0a2.tar.gz (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4), version: 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(requires-python:>=2.7, <4) 2023-04-19T08:37:29,683 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/28/1f/5244fdfa5ba3e812bce1072fb45755c185240b961c5150d6fd92fa0ed2bb/nngt-1.2.0-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:29,683 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/de/ce/5fdb8cbb30d49ec87c36aceba565ef2f9c04bd2c23dc1d5c621d0bce5ea6/nngt-1.2.0-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:29,683 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/36/9a/16076817d9d648a6e31e692e1918c3db7d0a49070677761e850802f41d71/nngt-1.2.0-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:29,683 Skipping link: No binaries permitted for nngt: 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https://files.pythonhosted.org/packages/34/d5/c9e4dc8e6e36de7073a4a96c5dc5979f0d4e797dbf60cb3341f3aaae48ba/nngt-2.5.2.zip (from https://pypi.org/simple/nngt/) (requires-python:>=3.5, <4), version: 2.5.2 2023-04-19T08:37:29,709 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/77/8a/601d913df164ac5059d1ed307e0431d6da330ff5596433a08747ff0232d9/nngt-2.5.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,709 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/7f/ed/de16eae31c59d3a1a2848ad956d6f3e733bc973db3315820a6a208242c07/nngt-2.5.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,709 Skipping link: No binaries permitted for nngt: 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https://files.pythonhosted.org/packages/00/06/53e3462b831a349be0ba7a840a7082103ca4b5e1f4ac22779c0657825320/nngt-2.5.3.zip (from https://pypi.org/simple/nngt/) (requires-python:>=3.5, <4), version: 2.5.3 2023-04-19T08:37:29,710 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/e8/37/06e249da7417475015bcbf095a928b3c1bf252f0314060480b14f4c3de0d/nngt-2.6.0-cp310-cp310-manylinux_2_28_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,711 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/4d/09/f4bfaead5157f1d5fa7621c6b8fed3953e2240de604426db6f6863c4285d/nngt-2.6.0-cp36-cp36m-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,711 Skipping link: No binaries permitted for nngt: 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https://files.pythonhosted.org/packages/bd/65/978aa22cba1d6da9191ec08e0e2561170b403bc56624c573e537b641af0b/NNGT-2.7.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,716 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/09/f8/be17efc612e2082d4f694cce0c0cd94a39e24b7f30a5e2302a2957660a9d/NNGT-2.7.0-pp38-pypy38_pp73-manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,717 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/ad/e0/9720d514323fc44dd8472ae8bbb26b0517a229b0c8787ea96c3d4130506c/NNGT-2.7.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,717 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/ab/dd/c1bcfd9852d1290a92eace532f78d9c4270684c9a128e01b1e01d585245c/NNGT-2.7.0-pp39-pypy39_pp73-manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,717 Skipping link: No binaries permitted for nngt: https://files.pythonhosted.org/packages/8f/41/d431174139158d3cdf81f7c663037786254a1e1ede8e124d7787541feae5/NNGT-2.7.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,718 Found link https://files.pythonhosted.org/packages/a5/17/04931bc0160439b190c32cd1762acaa0f7f07af9a0044e3884e56c8e39f0/NNGT-2.7.0.tar.gz (from https://pypi.org/simple/nngt/) (requires-python:>=3.7), version: 2.7.0 2023-04-19T08:37:29,718 Fetching project page and analyzing links: https://www.piwheels.org/simple/nngt/ 2023-04-19T08:37:29,718 Getting page https://www.piwheels.org/simple/nngt/ 2023-04-19T08:37:29,719 Found index url https://www.piwheels.org/simple 2023-04-19T08:37:29,989 Fetched page https://www.piwheels.org/simple/nngt/ as text/html 2023-04-19T08:37:29,996 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/NNGT-2.7.0-cp37-cp37m-linux_armv7l.whl#sha256=9d09fe3ca803c9396310b2550988a9d48147ad0576dde9622f7ce75511ccea37 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,996 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/NNGT-2.7.0-cp37-cp37m-linux_armv6l.whl#sha256=9d09fe3ca803c9396310b2550988a9d48147ad0576dde9622f7ce75511ccea37 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.7) 2023-04-19T08:37:29,997 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.6.0-py2.py3-none-any.whl#sha256=af6d849a951d221cd60560992ce4447327dce94c414722d4d03bb36873e6d19c (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,997 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.5.3-py2.py3-none-any.whl#sha256=0396081cd1eb4ddd3cb4404efe766ab87726a54615157f5817fcdd4bd9c5db66 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,997 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.5.2-py2.py3-none-any.whl#sha256=19746547edf11671d39304a6bb5d3d7a80bb58d56fc5d2cfc8834752ba7c7d81 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,997 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.5.1-py2.py3-none-any.whl#sha256=469e8e3cc0de1ec7e780bb3ee9930f9ca299de96783dec79dffaf2333d02d7f9 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,997 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.5.0-py2.py3-none-any.whl#sha256=3d7a5eadd1bba7d15e228118108110782a0317230eea89a2766ff248eca8b8e4 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,998 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.4.0-py2.py3-none-any.whl#sha256=719fa783391ce80efda6895bb3cf21d095eb304cc84b1b9093eec691f12d5430 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,998 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.3.0-py2.py3-none-any.whl#sha256=9ceb1e3f6b850a6312d2f6369049700bdd0f6373ceb0dcac6db84298061771a5 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,998 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.2.1-py2.py3-none-any.whl#sha256=85f0e4e58467f73bea13e2a95cde89ab37f090a0b5aebd6353c6e573a1c7f265 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,998 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.2.0-py2.py3-none-any.whl#sha256=b5c201d1824b438021efb0939dbfd509a315b7446fdd0684d4e8b164f6ddb614 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,998 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.1.0-py2.py3-none-any.whl#sha256=4041f7d9a402e8affcf4c07e8f79a91180a4a9f0a20493124feb85720fca8cdd (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,999 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-2.0.1-py2.py3-none-any.whl#sha256=9da1fcfcb6e6bc1ccaba53465f0cd9da1b913ab07fb819bf9f7bb8d8d125fc7a (from https://www.piwheels.org/simple/nngt/) (requires-python:>=3.5, <4) 2023-04-19T08:37:29,999 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.3.2-py2.py3-none-any.whl#sha256=2e9bbc319b5dc8e0a175fe922cbb21384a1d2062997ddf0c130e431c65d56556 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:29,999 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.3.0-py2.py3-none-any.whl#sha256=92fd1d9e492340b28c4d6afc731517fbdefe0e7ec055373d9d168e8e186010bd (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:29,999 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.2.0-py2.py3-none-any.whl#sha256=78c1a2180699a196075737e03ae45317d5cbc25797a4da300bcad9f4dfaac92a (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:29,999 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.1.1-py2.py3-none-any.whl#sha256=cf97d4373ddc648722bda8f85401c6e50bed8ed00e83a8d20c428404fb5213bb (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:30,000 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.1.0-py2.py3-none-any.whl#sha256=350f62a1d8f12c02cbc9349e841506285a02e93a6064804eca88ee287543b603 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:30,000 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.0.1-py2.py3-none-any.whl#sha256=36e7bdc186dc9ab11d060c4ff2e57e21f7fba2eeeb6584f16325fa8dd10ce51b (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:30,000 Skipping link: No binaries permitted for nngt: https://www.piwheels.org/simple/nngt/nngt-1.0.0a2-py2.py3-none-any.whl#sha256=abb39c653092b849625bc2b29a452f537a21ba15eeaa58cb2cef702b5ad413e5 (from https://www.piwheels.org/simple/nngt/) (requires-python:>=2.7, <4) 2023-04-19T08:37:30,000 Skipping link: not a file: https://www.piwheels.org/simple/nngt/ 2023-04-19T08:37:30,000 Skipping link: not a file: https://pypi.org/simple/nngt/ 2023-04-19T08:37:30,022 Given no hashes to check 1 links for project 'nngt': discarding no candidates 2023-04-19T08:37:30,039 Collecting nngt==2.7.0 2023-04-19T08:37:30,041 Created temporary directory: /tmp/pip-unpack-k9bzd48z 2023-04-19T08:37:30,100 Downloading NNGT-2.7.0.tar.gz (340 kB) 2023-04-19T08:37:30,522 Added nngt==2.7.0 from https://files.pythonhosted.org/packages/a5/17/04931bc0160439b190c32cd1762acaa0f7f07af9a0044e3884e56c8e39f0/NNGT-2.7.0.tar.gz to build tracker '/tmp/pip-build-tracker-kztko_dx' 2023-04-19T08:37:30,534 Created temporary directory: /tmp/pip-build-env-ojtl8dua 2023-04-19T08:37:30,548 Installing build dependencies: started 2023-04-19T08:37:30,550 Running command pip subprocess to install build dependencies 2023-04-19T08:37:31,792 Using pip 23.0.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-04-19T08:37:32,500 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-19T08:37:32,527 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-19T08:37:34,187 Collecting setuptools>=61.0 2023-04-19T08:37:34,293 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.6.1-py3-none-any.whl (1.1 MB) 2023-04-19T08:37:35,621 Collecting numpy>=1.17 2023-04-19T08:37:36,857 Using cached https://www.piwheels.org/simple/numpy/numpy-1.24.2-cp39-cp39-linux_armv7l.whl (12.3 MB) 2023-04-19T08:37:38,692 Collecting cython>=0.18 2023-04-19T08:37:39,214 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.34-cp39-cp39-linux_armv7l.whl (5.0 MB) 2023-04-19T08:37:43,392 Installing collected packages: setuptools, numpy, cython 2023-04-19T08:37:54,523 Creating /tmp/pip-build-env-ojtl8dua/overlay/bin 2023-04-19T08:37:54,526 changing mode of /tmp/pip-build-env-ojtl8dua/overlay/bin/f2py to 755 2023-04-19T08:37:54,528 changing mode of /tmp/pip-build-env-ojtl8dua/overlay/bin/f2py3 to 755 2023-04-19T08:37:54,530 changing mode of /tmp/pip-build-env-ojtl8dua/overlay/bin/f2py3.9 to 755 2023-04-19T08:37:57,483 changing mode of /tmp/pip-build-env-ojtl8dua/overlay/bin/cygdb to 755 2023-04-19T08:37:57,486 changing mode of /tmp/pip-build-env-ojtl8dua/overlay/bin/cython to 755 2023-04-19T08:37:57,488 changing mode of /tmp/pip-build-env-ojtl8dua/overlay/bin/cythonize to 755 2023-04-19T08:37:57,513 Successfully installed cython-0.29.34 numpy-1.24.2 setuptools-67.6.1 2023-04-19T08:37:58,141 Installing build dependencies: finished with status 'done' 2023-04-19T08:37:58,146 Getting requirements to build wheel: started 2023-04-19T08:37:58,147 Running command Getting requirements to build wheel 2023-04-19T08:38:04,563 Compiling ./nngt/generation/cconnect.pyx because it changed. 2023-04-19T08:38:04,563 [1/1] Cythonizing ./nngt/generation/cconnect.pyx 2023-04-19T08:38:04,613 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-04-19T08:38:04,613 warnings.warn(msg, _BetaConfiguration) 2023-04-19T08:38:04,897 running egg_info 2023-04-19T08:38:04,903 writing NNGT.egg-info/PKG-INFO 2023-04-19T08:38:04,905 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/setuptools/dist.py:159: UserWarning: newlines not allowed and will break in the future 2023-04-19T08:38:04,906 warnings.warn("newlines not allowed and will break in the future") 2023-04-19T08:38:04,909 writing dependency_links to NNGT.egg-info/dependency_links.txt 2023-04-19T08:38:04,912 writing requirements to NNGT.egg-info/requires.txt 2023-04-19T08:38:04,914 writing top-level names to NNGT.egg-info/top_level.txt 2023-04-19T08:38:04,953 reading manifest file 'NNGT.egg-info/SOURCES.txt' 2023-04-19T08:38:04,958 reading manifest template 'MANIFEST.in' 2023-04-19T08:38:05,086 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-04-19T08:38:05,088 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-04-19T08:38:05,089 adding license file 'LICENSES/BSD-2-Clause.txt' 2023-04-19T08:38:05,090 adding license file 'LICENSES/CC-BY-SA-4.0.txt' 2023-04-19T08:38:05,090 adding license file 'LICENSES/CC0-1.0.txt' 2023-04-19T08:38:05,090 adding license file 'LICENSES/GPL-3.0-or-later.txt' 2023-04-19T08:38:05,090 adding license file 'LICENSES/Python-2.0.txt' 2023-04-19T08:38:05,099 writing manifest file 'NNGT.egg-info/SOURCES.txt' 2023-04-19T08:38:05,625 Getting requirements to build wheel: finished with status 'done' 2023-04-19T08:38:05,640 Installing backend dependencies: started 2023-04-19T08:38:05,641 Running command pip subprocess to install backend dependencies 2023-04-19T08:38:06,888 Using pip 23.0.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-04-19T08:38:07,590 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-19T08:38:07,617 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-19T08:38:08,059 Collecting wheel 2023-04-19T08:38:08,079 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-04-19T08:38:11,808 Installing collected packages: wheel 2023-04-19T08:38:12,054 Creating /tmp/pip-build-env-ojtl8dua/normal/bin 2023-04-19T08:38:12,056 changing mode of /tmp/pip-build-env-ojtl8dua/normal/bin/wheel to 755 2023-04-19T08:38:12,070 Successfully installed wheel-0.40.0 2023-04-19T08:38:12,530 Installing backend dependencies: finished with status 'done' 2023-04-19T08:38:12,533 Created temporary directory: /tmp/pip-modern-metadata-e53g2qiu 2023-04-19T08:38:12,537 Preparing metadata (pyproject.toml): started 2023-04-19T08:38:12,538 Running command Preparing metadata (pyproject.toml) 2023-04-19T08:38:14,044 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-04-19T08:38:14,045 warnings.warn(msg, _BetaConfiguration) 2023-04-19T08:38:14,362 running dist_info 2023-04-19T08:38:14,369 creating /tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info 2023-04-19T08:38:14,375 writing /tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/PKG-INFO 2023-04-19T08:38:14,377 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/setuptools/dist.py:159: UserWarning: newlines not allowed and will break in the future 2023-04-19T08:38:14,377 warnings.warn("newlines not allowed and will break in the future") 2023-04-19T08:38:14,381 writing dependency_links to /tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/dependency_links.txt 2023-04-19T08:38:14,383 writing requirements to /tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/requires.txt 2023-04-19T08:38:14,384 writing top-level names to /tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/top_level.txt 2023-04-19T08:38:14,386 writing manifest file '/tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/SOURCES.txt' 2023-04-19T08:38:14,435 reading manifest file '/tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/SOURCES.txt' 2023-04-19T08:38:14,437 reading manifest template 'MANIFEST.in' 2023-04-19T08:38:14,575 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-04-19T08:38:14,577 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-04-19T08:38:14,577 adding license file 'LICENSES/BSD-2-Clause.txt' 2023-04-19T08:38:14,577 adding license file 'LICENSES/CC-BY-SA-4.0.txt' 2023-04-19T08:38:14,577 adding license file 'LICENSES/CC0-1.0.txt' 2023-04-19T08:38:14,577 adding license file 'LICENSES/GPL-3.0-or-later.txt' 2023-04-19T08:38:14,578 adding license file 'LICENSES/Python-2.0.txt' 2023-04-19T08:38:14,583 writing manifest file '/tmp/pip-modern-metadata-e53g2qiu/NNGT.egg-info/SOURCES.txt' 2023-04-19T08:38:14,584 creating '/tmp/pip-modern-metadata-e53g2qiu/NNGT-2.7.0.dist-info' 2023-04-19T08:38:14,819 Preparing metadata (pyproject.toml): finished with status 'done' 2023-04-19T08:38:14,829 Source in /tmp/pip-wheel-emksobax/nngt_6011e23f90d3432ebf636511b3a7879b has version 2.7.0, which satisfies requirement nngt==2.7.0 from https://files.pythonhosted.org/packages/a5/17/04931bc0160439b190c32cd1762acaa0f7f07af9a0044e3884e56c8e39f0/NNGT-2.7.0.tar.gz 2023-04-19T08:38:14,830 Removed nngt==2.7.0 from https://files.pythonhosted.org/packages/a5/17/04931bc0160439b190c32cd1762acaa0f7f07af9a0044e3884e56c8e39f0/NNGT-2.7.0.tar.gz from build tracker '/tmp/pip-build-tracker-kztko_dx' 2023-04-19T08:38:14,840 Created temporary directory: /tmp/pip-unpack-e7onthjf 2023-04-19T08:38:14,840 Building wheels for collected packages: nngt 2023-04-19T08:38:14,845 Created temporary directory: /tmp/pip-wheel-3s0k80tb 2023-04-19T08:38:14,845 Destination directory: /tmp/pip-wheel-3s0k80tb 2023-04-19T08:38:14,847 Building wheel for nngt (pyproject.toml): started 2023-04-19T08:38:14,848 Running command Building wheel for nngt (pyproject.toml) 2023-04-19T08:38:16,253 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-04-19T08:38:16,254 warnings.warn(msg, _BetaConfiguration) 2023-04-19T08:38:16,543 running bdist_wheel 2023-04-19T08:38:16,560 running build 2023-04-19T08:38:16,560 running build_py 2023-04-19T08:38:16,567 creating build 2023-04-19T08:38:16,567 creating build/lib.linux-armv7l-cpython-39 2023-04-19T08:38:16,568 creating build/lib.linux-armv7l-cpython-39/nngt 2023-04-19T08:38:16,569 copying ./nngt/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt 2023-04-19T08:38:16,572 creating build/lib.linux-armv7l-cpython-39/nngt/simulation 2023-04-19T08:38:16,573 copying ./nngt/simulation/nest_utils.py -> build/lib.linux-armv7l-cpython-39/nngt/simulation 2023-04-19T08:38:16,576 copying ./nngt/simulation/nest_graph.py -> build/lib.linux-armv7l-cpython-39/nngt/simulation 2023-04-19T08:38:16,579 copying ./nngt/simulation/nest_activity.py -> build/lib.linux-armv7l-cpython-39/nngt/simulation 2023-04-19T08:38:16,582 copying ./nngt/simulation/nest_plot.py -> build/lib.linux-armv7l-cpython-39/nngt/simulation 2023-04-19T08:38:16,585 copying ./nngt/simulation/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/simulation 2023-04-19T08:38:16,587 creating build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,588 copying ./nngt/plot/custom_plt.py -> build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,591 copying ./nngt/plot/hive_helpers.py -> build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,594 copying ./nngt/plot/plt_networks.py -> build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,598 copying ./nngt/plot/plt_properties.py -> build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,601 copying ./nngt/plot/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,603 copying ./nngt/plot/animations.py -> build/lib.linux-armv7l-cpython-39/nngt/plot 2023-04-19T08:38:16,607 creating build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,608 copying ./nngt/geometry/shape.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,614 copying ./nngt/geometry/plot.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,616 copying ./nngt/geometry/geom_utils.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,618 copying ./nngt/geometry/shape_io.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,621 copying ./nngt/geometry/pync_log.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,623 copying ./nngt/geometry/units.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,625 copying ./nngt/geometry/backup_shape.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,628 copying ./nngt/geometry/dxftools.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,630 copying ./nngt/geometry/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,632 copying ./nngt/geometry/svgtools.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,634 copying ./nngt/geometry/triangulate.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,636 copying ./nngt/geometry/tools.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,640 creating build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,641 copying ./nngt/lib/errors.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,643 copying ./nngt/lib/_frozendict.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,645 copying ./nngt/lib/rng_tools.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,648 copying ./nngt/lib/nngt_config.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,650 copying ./nngt/lib/sorting.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,653 copying ./nngt/lib/graph_helpers.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,656 copying ./nngt/lib/connect_tools.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,658 copying ./nngt/lib/db_tools.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,660 copying ./nngt/lib/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,662 copying ./nngt/lib/test_functions.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,665 copying ./nngt/lib/decorator.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,667 copying ./nngt/lib/converters.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,669 copying ./nngt/lib/graph_backends.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,672 copying ./nngt/lib/constants.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,673 copying ./nngt/lib/logger.py -> build/lib.linux-armv7l-cpython-39/nngt/lib 2023-04-19T08:38:16,676 creating build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,677 copying ./nngt/analysis/activity_analysis.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,680 copying ./nngt/analysis/graph_analysis.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,683 copying ./nngt/analysis/ig_functions.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,686 copying ./nngt/analysis/nx_functions.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,689 copying ./nngt/analysis/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,691 copying ./nngt/analysis/bayesian_blocks.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,694 copying ./nngt/analysis/clustering.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,697 copying ./nngt/analysis/gt_functions.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,700 copying ./nngt/analysis/nngt_functions.py -> build/lib.linux-armv7l-cpython-39/nngt/analysis 2023-04-19T08:38:16,703 creating build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,704 copying ./nngt/core/nngt_graph.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,708 copying ./nngt/core/nx_graph.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,711 copying ./nngt/core/connections.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,713 copying ./nngt/core/gt_graph.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,716 copying ./nngt/core/graph_interface.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,718 copying ./nngt/core/networks.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,721 copying ./nngt/core/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,723 copying ./nngt/core/graph.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,727 copying ./nngt/core/spatial_graph.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,729 copying ./nngt/core/group_structure.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,732 copying ./nngt/core/neural_pop_group.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,735 copying ./nngt/core/ig_graph.py -> build/lib.linux-armv7l-cpython-39/nngt/core 2023-04-19T08:38:16,739 creating build/lib.linux-armv7l-cpython-39/nngt/geospatial 2023-04-19T08:38:16,740 copying ./nngt/geospatial/plot.py -> build/lib.linux-armv7l-cpython-39/nngt/geospatial 2023-04-19T08:38:16,742 copying ./nngt/geospatial/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/geospatial 2023-04-19T08:38:16,744 copying ./nngt/geospatial/countries.py -> build/lib.linux-armv7l-cpython-39/nngt/geospatial 2023-04-19T08:38:16,747 creating build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,748 copying ./nngt/generation/graph_connectivity.py -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,752 copying ./nngt/generation/rewiring.py -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,754 copying ./nngt/generation/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,756 copying ./nngt/generation/connectors.py -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,759 copying ./nngt/generation/mpi_connect.py -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,761 copying ./nngt/generation/connect_algorithms.py -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,765 creating build/lib.linux-armv7l-cpython-39/nngt/database 2023-04-19T08:38:16,766 copying ./nngt/database/db_main.py -> build/lib.linux-armv7l-cpython-39/nngt/database 2023-04-19T08:38:16,769 copying ./nngt/database/db_generation.py -> build/lib.linux-armv7l-cpython-39/nngt/database 2023-04-19T08:38:16,771 copying ./nngt/database/csv_utils.py -> build/lib.linux-armv7l-cpython-39/nngt/database 2023-04-19T08:38:16,773 copying ./nngt/database/pickle_field.py -> build/lib.linux-armv7l-cpython-39/nngt/database 2023-04-19T08:38:16,775 copying ./nngt/database/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/database 2023-04-19T08:38:16,778 creating build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,779 copying ./nngt/io/saving_helpers.py -> build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,781 copying ./nngt/io/graph_loading.py -> build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,784 copying ./nngt/io/graph_saving.py -> build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,787 copying ./nngt/io/loading_helpers.py -> build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,789 copying ./nngt/io/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,791 copying ./nngt/io/io_helpers.py -> build/lib.linux-armv7l-cpython-39/nngt/io 2023-04-19T08:38:16,794 creating build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,795 copying ./nngt/plot/chord_diag/example.py -> build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,797 copying ./nngt/plot/chord_diag/utilities.py -> build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,799 copying ./nngt/plot/chord_diag/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,801 copying ./nngt/plot/chord_diag/gradient.py -> build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,803 copying ./nngt/plot/chord_diag/chord_diagram.py -> build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,806 creating build/lib.linux-armv7l-cpython-39/nngt/geometry/examples 2023-04-19T08:38:16,807 copying ./nngt/geometry/examples/gen_obstacles.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/examples 2023-04-19T08:38:16,809 copying ./nngt/geometry/examples/backup_shape.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/examples 2023-04-19T08:38:16,811 copying ./nngt/geometry/examples/load_culture.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/examples 2023-04-19T08:38:16,812 copying ./nngt/geometry/examples/load_shapes.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/examples 2023-04-19T08:38:16,815 creating build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import 2023-04-19T08:38:16,816 copying ./nngt/geometry/dxf_import/homcoord.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import 2023-04-19T08:38:16,819 copying ./nngt/geometry/dxf_import/__init__.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import 2023-04-19T08:38:16,820 copying ./nngt/geometry/dxf_import/read_dxf.py -> build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import 2023-04-19T08:38:16,827 copying ./nngt/nngt.conf.default -> build/lib.linux-armv7l-cpython-39/nngt 2023-04-19T08:38:16,829 copying ./nngt/geometry/README.md -> build/lib.linux-armv7l-cpython-39/nngt/geometry 2023-04-19T08:38:16,831 copying ./nngt/generation/cconnect.pyx -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,837 copying ./nngt/generation/cconnect.pxd -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,839 copying ./nngt/generation/cconnect.pyxbld -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,842 copying ./nngt/generation/func_connect.cpp -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,845 copying ./nngt/generation/func_connect.h -> build/lib.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,848 copying ./nngt/plot/chord_diag/README.md -> build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag 2023-04-19T08:38:16,860 running build_ext 2023-04-19T08:38:16,865 building 'nngt.generation.cconnect' extension 2023-04-19T08:38:16,866 creating build/temp.linux-armv7l-cpython-39 2023-04-19T08:38:16,867 creating build/temp.linux-armv7l-cpython-39/nngt 2023-04-19T08:38:16,867 creating build/temp.linux-armv7l-cpython-39/nngt/generation 2023-04-19T08:38:16,868 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I./nngt/generation -I./nngt/generation/ -I/tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c ./nngt/generation/cconnect.cpp -o build/temp.linux-armv7l-cpython-39/./nngt/generation/cconnect.o 2023-04-19T08:38:17,369 In file included from /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-04-19T08:38:17,369 from /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-04-19T08:38:17,369 from /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-04-19T08:38:17,369 from ./nngt/generation/cconnect.cpp:802: 2023-04-19T08:38:17,370 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-04-19T08:38:17,370 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-04-19T08:38:17,370 | ^~~~~~~ 2023-04-19T08:39:04,581 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I./nngt/generation -I./nngt/generation/ -I/tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c ./nngt/generation/func_connect.cpp -o build/temp.linux-armv7l-cpython-39/./nngt/generation/func_connect.o 2023-04-19T08:39:04,917 ./nngt/generation/func_connect.cpp:232: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 2023-04-19T08:39:04,917 232 | #pragma omp parallel num_threads(omp) 2023-04-19T08:39:04,918 | 2023-04-19T08:39:04,918 ./nngt/generation/func_connect.cpp:237: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas] 2023-04-19T08:39:04,918 237 | #pragma omp for schedule(static) 2023-04-19T08:39:04,918 | 2023-04-19T08:39:04,919 ./nngt/generation/func_connect.cpp:324: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 2023-04-19T08:39:04,919 324 | #pragma omp parallel num_threads(num_omp) 2023-04-19T08:39:04,919 | 2023-04-19T08:39:04,919 ./nngt/generation/func_connect.cpp:340: warning: ignoring ‘#pragma omp single’ [-Wunknown-pragmas] 2023-04-19T08:39:04,919 340 | #pragma omp single 2023-04-19T08:39:04,920 | 2023-04-19T08:39:04,920 ./nngt/generation/func_connect.cpp:344: warning: ignoring ‘#pragma omp barrier’ [-Wunknown-pragmas] 2023-04-19T08:39:04,920 344 | #pragma omp barrier 2023-04-19T08:39:04,920 | 2023-04-19T08:39:04,920 ./nngt/generation/func_connect.cpp:345: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas] 2023-04-19T08:39:04,920 345 | #pragma omp flush(current_enum) 2023-04-19T08:39:04,921 | 2023-04-19T08:39:04,921 ./nngt/generation/func_connect.cpp:349: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas] 2023-04-19T08:39:04,921 349 | #pragma omp for schedule(static) 2023-04-19T08:39:04,921 | 2023-04-19T08:39:04,921 ./nngt/generation/func_connect.cpp:401: warning: ignoring ‘#pragma omp atomic’ [-Wunknown-pragmas] 2023-04-19T08:39:04,921 401 | #pragma omp atomic 2023-04-19T08:39:04,922 | 2023-04-19T08:39:04,922 ./nngt/generation/func_connect.cpp:404: warning: ignoring ‘#pragma omp barrier’ [-Wunknown-pragmas] 2023-04-19T08:39:04,922 404 | #pragma omp barrier // ensure everyone is ready 2023-04-19T08:39:04,922 | 2023-04-19T08:39:04,922 ./nngt/generation/func_connect.cpp:405: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas] 2023-04-19T08:39:04,922 405 | #pragma omp flush(current_enum) // and gets last value 2023-04-19T08:39:04,923 | 2023-04-19T08:39:04,923 ./nngt/generation/func_connect.cpp:406: warning: ignoring ‘#pragma omp barrier’ [-Wunknown-pragmas] 2023-04-19T08:39:04,923 406 | #pragma omp barrier // for sure 2023-04-19T08:39:04,923 | 2023-04-19T08:39:04,923 ./nngt/generation/func_connect.cpp:410: warning: ignoring ‘#pragma omp single’ [-Wunknown-pragmas] 2023-04-19T08:39:04,923 410 | #pragma omp single 2023-04-19T08:39:04,924 | 2023-04-19T08:39:04,924 ./nngt/generation/func_connect.cpp:420: warning: ignoring ‘#pragma omp barrier’ [-Wunknown-pragmas] 2023-04-19T08:39:04,924 420 | #pragma omp barrier 2023-04-19T08:39:04,924 | 2023-04-19T08:39:04,924 ./nngt/generation/func_connect.cpp:422: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 2023-04-19T08:39:04,924 422 | #pragma omp critical 2023-04-19T08:39:04,925 | 2023-04-19T08:39:04,925 ./nngt/generation/func_connect.cpp:444: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas] 2023-04-19T08:39:04,925 444 | #pragma omp flush(ecount_fill) 2023-04-19T08:39:04,925 | 2023-04-19T08:39:06,093 ./nngt/generation/func_connect.cpp: In function ‘void generation::_gen_edges(int64_t*, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, unsigned int, bool, bool, std::vector&)’: 2023-04-19T08:39:06,093 ./nngt/generation/func_connect.cpp:229:9: warning: unused variable ‘omp’ [-Wunused-variable] 2023-04-19T08:39:06,093 229 | int omp = seeds.size(); 2023-04-19T08:39:06,094 | ^~~ 2023-04-19T08:39:06,116 ./nngt/generation/func_connect.cpp: In function ‘void generation::_cdistance_rule(int64_t*, const std::vector&, const std::vector >&, const string&, float, float, const std::vector&, const std::vector&, size_t, size_t, const std::vector >&, std::vector&, bool, bool, std::vector&)’: 2023-04-19T08:39:06,116 ./nngt/generation/func_connect.cpp:271:9: warning: unused variable ‘num_omp’ [-Wunused-variable] 2023-04-19T08:39:06,116 271 | int num_omp = seeds.size(); 2023-04-19T08:39:06,116 | ^~~~~~~ 2023-04-19T08:39:09,826 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/./nngt/generation/cconnect.o build/temp.linux-armv7l-cpython-39/./nngt/generation/func_connect.o -L./nngt/generation/ -L/usr/lib -L/usr/lib -lgomp -o build/lib.linux-armv7l-cpython-39/nngt/generation/cconnect.cpython-39-arm-linux-gnueabihf.so 2023-04-19T08:39:10,356 installing to build/bdist.linux-armv7l/wheel 2023-04-19T08:39:10,357 running install 2023-04-19T08:39:10,383 running install_lib 2023-04-19T08:39:10,389 creating build/bdist.linux-armv7l 2023-04-19T08:39:10,389 creating build/bdist.linux-armv7l/wheel 2023-04-19T08:39:10,391 creating build/bdist.linux-armv7l/wheel/nngt 2023-04-19T08:39:10,393 creating build/bdist.linux-armv7l/wheel/nngt/simulation 2023-04-19T08:39:10,394 copying build/lib.linux-armv7l-cpython-39/nngt/simulation/nest_utils.py -> build/bdist.linux-armv7l/wheel/nngt/simulation 2023-04-19T08:39:10,397 copying build/lib.linux-armv7l-cpython-39/nngt/simulation/nest_graph.py -> build/bdist.linux-armv7l/wheel/nngt/simulation 2023-04-19T08:39:10,399 copying build/lib.linux-armv7l-cpython-39/nngt/simulation/nest_activity.py -> build/bdist.linux-armv7l/wheel/nngt/simulation 2023-04-19T08:39:10,402 copying build/lib.linux-armv7l-cpython-39/nngt/simulation/nest_plot.py -> build/bdist.linux-armv7l/wheel/nngt/simulation 2023-04-19T08:39:10,404 copying build/lib.linux-armv7l-cpython-39/nngt/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/simulation 2023-04-19T08:39:10,406 copying build/lib.linux-armv7l-cpython-39/nngt/nngt.conf.default -> build/bdist.linux-armv7l/wheel/nngt 2023-04-19T08:39:10,409 creating build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,410 copying build/lib.linux-armv7l-cpython-39/nngt/plot/custom_plt.py -> build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,412 copying build/lib.linux-armv7l-cpython-39/nngt/plot/hive_helpers.py -> build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,414 copying build/lib.linux-armv7l-cpython-39/nngt/plot/plt_networks.py -> build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,419 creating build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,420 copying build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag/example.py -> build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,422 copying build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag/README.md -> build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,424 copying build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag/utilities.py -> build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,427 copying build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,428 copying build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag/gradient.py -> build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,430 copying build/lib.linux-armv7l-cpython-39/nngt/plot/chord_diag/chord_diagram.py -> build/bdist.linux-armv7l/wheel/nngt/plot/chord_diag 2023-04-19T08:39:10,433 copying build/lib.linux-armv7l-cpython-39/nngt/plot/plt_properties.py -> build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,436 copying build/lib.linux-armv7l-cpython-39/nngt/plot/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,438 copying build/lib.linux-armv7l-cpython-39/nngt/plot/animations.py -> build/bdist.linux-armv7l/wheel/nngt/plot 2023-04-19T08:39:10,442 creating build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,443 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/shape.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,446 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/README.md -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,448 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/plot.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,450 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/geom_utils.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,452 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/shape_io.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,454 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/pync_log.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,457 creating build/bdist.linux-armv7l/wheel/nngt/geometry/examples 2023-04-19T08:39:10,457 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/examples/gen_obstacles.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/examples 2023-04-19T08:39:10,460 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/examples/backup_shape.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/examples 2023-04-19T08:39:10,461 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/examples/load_culture.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/examples 2023-04-19T08:39:10,463 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/examples/load_shapes.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/examples 2023-04-19T08:39:10,465 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/units.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,467 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/backup_shape.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,470 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/dxftools.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,472 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,474 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/svgtools.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,476 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/triangulate.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,479 creating build/bdist.linux-armv7l/wheel/nngt/geometry/dxf_import 2023-04-19T08:39:10,480 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import/homcoord.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/dxf_import 2023-04-19T08:39:10,483 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/dxf_import 2023-04-19T08:39:10,485 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/dxf_import/read_dxf.py -> build/bdist.linux-armv7l/wheel/nngt/geometry/dxf_import 2023-04-19T08:39:10,487 copying build/lib.linux-armv7l-cpython-39/nngt/geometry/tools.py -> build/bdist.linux-armv7l/wheel/nngt/geometry 2023-04-19T08:39:10,490 creating build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,491 copying build/lib.linux-armv7l-cpython-39/nngt/lib/errors.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,493 copying build/lib.linux-armv7l-cpython-39/nngt/lib/_frozendict.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,495 copying build/lib.linux-armv7l-cpython-39/nngt/lib/rng_tools.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,497 copying build/lib.linux-armv7l-cpython-39/nngt/lib/nngt_config.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,500 copying build/lib.linux-armv7l-cpython-39/nngt/lib/sorting.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,502 copying build/lib.linux-armv7l-cpython-39/nngt/lib/graph_helpers.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,505 copying build/lib.linux-armv7l-cpython-39/nngt/lib/connect_tools.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,508 copying build/lib.linux-armv7l-cpython-39/nngt/lib/db_tools.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,510 copying build/lib.linux-armv7l-cpython-39/nngt/lib/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,512 copying build/lib.linux-armv7l-cpython-39/nngt/lib/test_functions.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,514 copying build/lib.linux-armv7l-cpython-39/nngt/lib/decorator.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,517 copying build/lib.linux-armv7l-cpython-39/nngt/lib/converters.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,519 copying build/lib.linux-armv7l-cpython-39/nngt/lib/graph_backends.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,521 copying build/lib.linux-armv7l-cpython-39/nngt/lib/constants.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,523 copying build/lib.linux-armv7l-cpython-39/nngt/lib/logger.py -> build/bdist.linux-armv7l/wheel/nngt/lib 2023-04-19T08:39:10,526 creating build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,527 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/activity_analysis.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,529 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/graph_analysis.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,532 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/ig_functions.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,535 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/nx_functions.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,538 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,540 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/bayesian_blocks.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,542 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/clustering.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,545 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/gt_functions.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,548 copying build/lib.linux-armv7l-cpython-39/nngt/analysis/nngt_functions.py -> build/bdist.linux-armv7l/wheel/nngt/analysis 2023-04-19T08:39:10,551 creating build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,552 copying build/lib.linux-armv7l-cpython-39/nngt/core/nngt_graph.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,555 copying build/lib.linux-armv7l-cpython-39/nngt/core/nx_graph.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,558 copying build/lib.linux-armv7l-cpython-39/nngt/core/connections.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,560 copying build/lib.linux-armv7l-cpython-39/nngt/core/gt_graph.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,563 copying build/lib.linux-armv7l-cpython-39/nngt/core/graph_interface.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,566 copying build/lib.linux-armv7l-cpython-39/nngt/core/networks.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,569 copying build/lib.linux-armv7l-cpython-39/nngt/core/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,571 copying build/lib.linux-armv7l-cpython-39/nngt/core/graph.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,574 copying build/lib.linux-armv7l-cpython-39/nngt/core/spatial_graph.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,577 copying build/lib.linux-armv7l-cpython-39/nngt/core/group_structure.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,580 copying build/lib.linux-armv7l-cpython-39/nngt/core/neural_pop_group.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,584 copying build/lib.linux-armv7l-cpython-39/nngt/core/ig_graph.py -> build/bdist.linux-armv7l/wheel/nngt/core 2023-04-19T08:39:10,587 copying build/lib.linux-armv7l-cpython-39/nngt/__init__.py -> build/bdist.linux-armv7l/wheel/nngt 2023-04-19T08:39:10,590 creating build/bdist.linux-armv7l/wheel/nngt/geospatial 2023-04-19T08:39:10,591 copying build/lib.linux-armv7l-cpython-39/nngt/geospatial/plot.py -> build/bdist.linux-armv7l/wheel/nngt/geospatial 2023-04-19T08:39:10,593 copying build/lib.linux-armv7l-cpython-39/nngt/geospatial/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/geospatial 2023-04-19T08:39:10,595 copying build/lib.linux-armv7l-cpython-39/nngt/geospatial/countries.py -> build/bdist.linux-armv7l/wheel/nngt/geospatial 2023-04-19T08:39:10,598 creating build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,599 copying build/lib.linux-armv7l-cpython-39/nngt/generation/cconnect.pyx -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,602 copying build/lib.linux-armv7l-cpython-39/nngt/generation/func_connect.cpp -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,605 copying build/lib.linux-armv7l-cpython-39/nngt/generation/graph_connectivity.py -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,608 copying build/lib.linux-armv7l-cpython-39/nngt/generation/func_connect.h -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,611 copying build/lib.linux-armv7l-cpython-39/nngt/generation/rewiring.py -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,614 copying build/lib.linux-armv7l-cpython-39/nngt/generation/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,616 copying build/lib.linux-armv7l-cpython-39/nngt/generation/connectors.py -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,618 copying build/lib.linux-armv7l-cpython-39/nngt/generation/mpi_connect.py -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,621 copying build/lib.linux-armv7l-cpython-39/nngt/generation/connect_algorithms.py -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,624 copying build/lib.linux-armv7l-cpython-39/nngt/generation/cconnect.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,690 copying build/lib.linux-armv7l-cpython-39/nngt/generation/cconnect.pxd -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,692 copying build/lib.linux-armv7l-cpython-39/nngt/generation/cconnect.pyxbld -> build/bdist.linux-armv7l/wheel/nngt/generation 2023-04-19T08:39:10,694 creating build/bdist.linux-armv7l/wheel/nngt/database 2023-04-19T08:39:10,695 copying build/lib.linux-armv7l-cpython-39/nngt/database/db_main.py -> build/bdist.linux-armv7l/wheel/nngt/database 2023-04-19T08:39:10,698 copying build/lib.linux-armv7l-cpython-39/nngt/database/db_generation.py -> build/bdist.linux-armv7l/wheel/nngt/database 2023-04-19T08:39:10,700 copying build/lib.linux-armv7l-cpython-39/nngt/database/csv_utils.py -> build/bdist.linux-armv7l/wheel/nngt/database 2023-04-19T08:39:10,702 copying build/lib.linux-armv7l-cpython-39/nngt/database/pickle_field.py -> build/bdist.linux-armv7l/wheel/nngt/database 2023-04-19T08:39:10,704 copying build/lib.linux-armv7l-cpython-39/nngt/database/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/database 2023-04-19T08:39:10,707 creating build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,708 copying build/lib.linux-armv7l-cpython-39/nngt/io/saving_helpers.py -> build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,710 copying build/lib.linux-armv7l-cpython-39/nngt/io/graph_loading.py -> build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,713 copying build/lib.linux-armv7l-cpython-39/nngt/io/graph_saving.py -> build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,715 copying build/lib.linux-armv7l-cpython-39/nngt/io/loading_helpers.py -> build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,718 copying build/lib.linux-armv7l-cpython-39/nngt/io/__init__.py -> build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,720 copying build/lib.linux-armv7l-cpython-39/nngt/io/io_helpers.py -> build/bdist.linux-armv7l/wheel/nngt/io 2023-04-19T08:39:10,721 running install_egg_info 2023-04-19T08:39:10,732 running egg_info 2023-04-19T08:39:10,737 writing NNGT.egg-info/PKG-INFO 2023-04-19T08:39:10,739 /tmp/pip-build-env-ojtl8dua/overlay/lib/python3.9/site-packages/setuptools/dist.py:159: UserWarning: newlines not allowed and will break in the future 2023-04-19T08:39:10,740 warnings.warn("newlines not allowed and will break in the future") 2023-04-19T08:39:10,743 writing dependency_links to NNGT.egg-info/dependency_links.txt 2023-04-19T08:39:10,745 writing requirements to NNGT.egg-info/requires.txt 2023-04-19T08:39:10,746 writing top-level names to NNGT.egg-info/top_level.txt 2023-04-19T08:39:10,783 reading manifest file 'NNGT.egg-info/SOURCES.txt' 2023-04-19T08:39:10,789 reading manifest template 'MANIFEST.in' 2023-04-19T08:39:10,927 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-04-19T08:39:10,929 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-04-19T08:39:10,929 adding license file 'LICENSES/BSD-2-Clause.txt' 2023-04-19T08:39:10,929 adding license file 'LICENSES/CC-BY-SA-4.0.txt' 2023-04-19T08:39:10,929 adding license file 'LICENSES/CC0-1.0.txt' 2023-04-19T08:39:10,929 adding license file 'LICENSES/GPL-3.0-or-later.txt' 2023-04-19T08:39:10,930 adding license file 'LICENSES/Python-2.0.txt' 2023-04-19T08:39:10,937 writing manifest file 'NNGT.egg-info/SOURCES.txt' 2023-04-19T08:39:10,939 Copying NNGT.egg-info to build/bdist.linux-armv7l/wheel/NNGT-2.7.0-py3.9.egg-info 2023-04-19T08:39:10,951 running install_scripts 2023-04-19T08:39:11,026 creating build/bdist.linux-armv7l/wheel/NNGT-2.7.0.dist-info/WHEEL 2023-04-19T08:39:11,029 creating '/tmp/pip-wheel-3s0k80tb/.tmp-zamw6ijl/NNGT-2.7.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-19T08:39:11,033 adding 'nngt/__init__.py' 2023-04-19T08:39:11,035 adding 'nngt/nngt.conf.default' 2023-04-19T08:39:11,037 adding 'nngt/analysis/__init__.py' 2023-04-19T08:39:11,039 adding 'nngt/analysis/activity_analysis.py' 2023-04-19T08:39:11,041 adding 'nngt/analysis/bayesian_blocks.py' 2023-04-19T08:39:11,045 adding 'nngt/analysis/clustering.py' 2023-04-19T08:39:11,050 adding 'nngt/analysis/graph_analysis.py' 2023-04-19T08:39:11,053 adding 'nngt/analysis/gt_functions.py' 2023-04-19T08:39:11,056 adding 'nngt/analysis/ig_functions.py' 2023-04-19T08:39:11,058 adding 'nngt/analysis/nngt_functions.py' 2023-04-19T08:39:11,061 adding 'nngt/analysis/nx_functions.py' 2023-04-19T08:39:11,063 adding 'nngt/core/__init__.py' 2023-04-19T08:39:11,065 adding 'nngt/core/connections.py' 2023-04-19T08:39:11,073 adding 'nngt/core/graph.py' 2023-04-19T08:39:11,075 adding 'nngt/core/graph_interface.py' 2023-04-19T08:39:11,079 adding 'nngt/core/group_structure.py' 2023-04-19T08:39:11,083 adding 'nngt/core/gt_graph.py' 2023-04-19T08:39:11,087 adding 'nngt/core/ig_graph.py' 2023-04-19T08:39:11,089 adding 'nngt/core/networks.py' 2023-04-19T08:39:11,096 adding 'nngt/core/neural_pop_group.py' 2023-04-19T08:39:11,100 adding 'nngt/core/nngt_graph.py' 2023-04-19T08:39:11,104 adding 'nngt/core/nx_graph.py' 2023-04-19T08:39:11,106 adding 'nngt/core/spatial_graph.py' 2023-04-19T08:39:11,108 adding 'nngt/database/__init__.py' 2023-04-19T08:39:11,110 adding 'nngt/database/csv_utils.py' 2023-04-19T08:39:11,112 adding 'nngt/database/db_generation.py' 2023-04-19T08:39:11,114 adding 'nngt/database/db_main.py' 2023-04-19T08:39:11,116 adding 'nngt/database/pickle_field.py' 2023-04-19T08:39:11,118 adding 'nngt/generation/__init__.py' 2023-04-19T08:39:11,689 adding 'nngt/generation/cconnect.cpython-39-arm-linux-gnueabihf.so' 2023-04-19T08:39:11,710 adding 'nngt/generation/cconnect.pxd' 2023-04-19T08:39:11,713 adding 'nngt/generation/cconnect.pyx' 2023-04-19T08:39:11,714 adding 'nngt/generation/cconnect.pyxbld' 2023-04-19T08:39:11,719 adding 'nngt/generation/connect_algorithms.py' 2023-04-19T08:39:11,721 adding 'nngt/generation/connectors.py' 2023-04-19T08:39:11,723 adding 'nngt/generation/func_connect.cpp' 2023-04-19T08:39:11,725 adding 'nngt/generation/func_connect.h' 2023-04-19T08:39:11,731 adding 'nngt/generation/graph_connectivity.py' 2023-04-19T08:39:11,734 adding 'nngt/generation/mpi_connect.py' 2023-04-19T08:39:11,737 adding 'nngt/generation/rewiring.py' 2023-04-19T08:39:11,739 adding 'nngt/geometry/README.md' 2023-04-19T08:39:11,741 adding 'nngt/geometry/__init__.py' 2023-04-19T08:39:11,743 adding 'nngt/geometry/backup_shape.py' 2023-04-19T08:39:11,745 adding 'nngt/geometry/dxftools.py' 2023-04-19T08:39:11,746 adding 'nngt/geometry/geom_utils.py' 2023-04-19T08:39:11,748 adding 'nngt/geometry/plot.py' 2023-04-19T08:39:11,749 adding 'nngt/geometry/pync_log.py' 2023-04-19T08:39:11,755 adding 'nngt/geometry/shape.py' 2023-04-19T08:39:11,757 adding 'nngt/geometry/shape_io.py' 2023-04-19T08:39:11,759 adding 'nngt/geometry/svgtools.py' 2023-04-19T08:39:11,761 adding 'nngt/geometry/tools.py' 2023-04-19T08:39:11,763 adding 'nngt/geometry/triangulate.py' 2023-04-19T08:39:11,764 adding 'nngt/geometry/units.py' 2023-04-19T08:39:11,766 adding 'nngt/geometry/dxf_import/__init__.py' 2023-04-19T08:39:11,769 adding 'nngt/geometry/dxf_import/homcoord.py' 2023-04-19T08:39:11,771 adding 'nngt/geometry/dxf_import/read_dxf.py' 2023-04-19T08:39:11,773 adding 'nngt/geometry/examples/backup_shape.py' 2023-04-19T08:39:11,775 adding 'nngt/geometry/examples/gen_obstacles.py' 2023-04-19T08:39:11,776 adding 'nngt/geometry/examples/load_culture.py' 2023-04-19T08:39:11,777 adding 'nngt/geometry/examples/load_shapes.py' 2023-04-19T08:39:11,779 adding 'nngt/geospatial/__init__.py' 2023-04-19T08:39:11,781 adding 'nngt/geospatial/countries.py' 2023-04-19T08:39:11,783 adding 'nngt/geospatial/plot.py' 2023-04-19T08:39:11,785 adding 'nngt/io/__init__.py' 2023-04-19T08:39:11,787 adding 'nngt/io/graph_loading.py' 2023-04-19T08:39:11,790 adding 'nngt/io/graph_saving.py' 2023-04-19T08:39:11,791 adding 'nngt/io/io_helpers.py' 2023-04-19T08:39:11,793 adding 'nngt/io/loading_helpers.py' 2023-04-19T08:39:11,795 adding 'nngt/io/saving_helpers.py' 2023-04-19T08:39:11,797 adding 'nngt/lib/__init__.py' 2023-04-19T08:39:11,799 adding 'nngt/lib/_frozendict.py' 2023-04-19T08:39:11,801 adding 'nngt/lib/connect_tools.py' 2023-04-19T08:39:11,803 adding 'nngt/lib/constants.py' 2023-04-19T08:39:11,804 adding 'nngt/lib/converters.py' 2023-04-19T08:39:11,805 adding 'nngt/lib/db_tools.py' 2023-04-19T08:39:11,808 adding 'nngt/lib/decorator.py' 2023-04-19T08:39:11,809 adding 'nngt/lib/errors.py' 2023-04-19T08:39:11,811 adding 'nngt/lib/graph_backends.py' 2023-04-19T08:39:11,813 adding 'nngt/lib/graph_helpers.py' 2023-04-19T08:39:11,815 adding 'nngt/lib/logger.py' 2023-04-19T08:39:11,817 adding 'nngt/lib/nngt_config.py' 2023-04-19T08:39:11,819 adding 'nngt/lib/rng_tools.py' 2023-04-19T08:39:11,821 adding 'nngt/lib/sorting.py' 2023-04-19T08:39:11,822 adding 'nngt/lib/test_functions.py' 2023-04-19T08:39:11,824 adding 'nngt/plot/__init__.py' 2023-04-19T08:39:11,829 adding 'nngt/plot/animations.py' 2023-04-19T08:39:11,830 adding 'nngt/plot/custom_plt.py' 2023-04-19T08:39:11,833 adding 'nngt/plot/hive_helpers.py' 2023-04-19T08:39:11,844 adding 'nngt/plot/plt_networks.py' 2023-04-19T08:39:11,849 adding 'nngt/plot/plt_properties.py' 2023-04-19T08:39:11,852 adding 'nngt/plot/chord_diag/README.md' 2023-04-19T08:39:11,853 adding 'nngt/plot/chord_diag/__init__.py' 2023-04-19T08:39:11,856 adding 'nngt/plot/chord_diag/chord_diagram.py' 2023-04-19T08:39:11,858 adding 'nngt/plot/chord_diag/example.py' 2023-04-19T08:39:11,859 adding 'nngt/plot/chord_diag/gradient.py' 2023-04-19T08:39:11,861 adding 'nngt/plot/chord_diag/utilities.py' 2023-04-19T08:39:11,863 adding 'nngt/simulation/__init__.py' 2023-04-19T08:39:11,866 adding 'nngt/simulation/nest_activity.py' 2023-04-19T08:39:11,868 adding 'nngt/simulation/nest_graph.py' 2023-04-19T08:39:11,872 adding 'nngt/simulation/nest_plot.py' 2023-04-19T08:39:11,875 adding 'nngt/simulation/nest_utils.py' 2023-04-19T08:39:11,876 adding 'NNGT-2.7.0.dist-info/BSD-2-Clause.txt' 2023-04-19T08:39:11,879 adding 'NNGT-2.7.0.dist-info/CC-BY-SA-4.0.txt' 2023-04-19T08:39:11,881 adding 'NNGT-2.7.0.dist-info/CC0-1.0.txt' 2023-04-19T08:39:11,887 adding 'NNGT-2.7.0.dist-info/GPL-3.0-or-later.txt' 2023-04-19T08:39:11,894 adding 'NNGT-2.7.0.dist-info/METADATA' 2023-04-19T08:39:11,896 adding 'NNGT-2.7.0.dist-info/Python-2.0.txt' 2023-04-19T08:39:11,897 adding 'NNGT-2.7.0.dist-info/WHEEL' 2023-04-19T08:39:11,898 adding 'NNGT-2.7.0.dist-info/top_level.txt' 2023-04-19T08:39:11,900 adding 'NNGT-2.7.0.dist-info/RECORD' 2023-04-19T08:39:11,923 removing build/bdist.linux-armv7l/wheel 2023-04-19T08:39:12,150 Building wheel for nngt (pyproject.toml): finished with status 'done' 2023-04-19T08:39:12,190 Created wheel for nngt: filename=NNGT-2.7.0-cp39-cp39-linux_armv7l.whl size=1483443 sha256=b9c8d2e2be4afd3befebfc06f1ed93957a376a5e343d38ada2cb32c4f176f74f 2023-04-19T08:39:12,191 Stored in directory: /tmp/pip-ephem-wheel-cache-jxgm87gy/wheels/59/34/e4/29319d4ee0b2b4e334d7900103a603c609ede1c00dee0ebdf5 2023-04-19T08:39:12,214 Successfully built nngt 2023-04-19T08:39:12,262 Removed build tracker: '/tmp/pip-build-tracker-kztko_dx'