2023-04-20T16:49:46,555 Created temporary directory: /tmp/pip-ephem-wheel-cache-4him2mzr
2023-04-20T16:49:46,560 Created temporary directory: /tmp/pip-build-tracker-quov2y3_
2023-04-20T16:49:46,561 Initialized build tracking at /tmp/pip-build-tracker-quov2y3_
2023-04-20T16:49:46,562 Created build tracker: /tmp/pip-build-tracker-quov2y3_
2023-04-20T16:49:46,562 Entered build tracker: /tmp/pip-build-tracker-quov2y3_
2023-04-20T16:49:46,563 Created temporary directory: /tmp/pip-wheel-jzk55xvi
2023-04-20T16:49:46,574 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-04-20T16:49:46,580 Created temporary directory: /tmp/pip-ephem-wheel-cache-wngp2mw0
2023-04-20T16:49:46,645 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-04-20T16:49:46,652 2 location(s) to search for versions of biotree-tools:
2023-04-20T16:49:46,652 * https://pypi.org/simple/biotree-tools/
2023-04-20T16:49:46,652 * https://www.piwheels.org/simple/biotree-tools/
2023-04-20T16:49:46,654 Fetching project page and analyzing links: https://pypi.org/simple/biotree-tools/
2023-04-20T16:49:46,655 Getting page https://pypi.org/simple/biotree-tools/
2023-04-20T16:49:46,658 Found index url https://pypi.org/simple
2023-04-20T16:49:46,849 Fetched page https://pypi.org/simple/biotree-tools/ as application/vnd.pypi.simple.v1+json
2023-04-20T16:49:46,852   Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/a1/44/cbcecd3b4bb6d830f301b56e04234622b53a0929791392adc873771b9eff/biotree_tools-0.0.1-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6)
2023-04-20T16:49:46,854   Found link https://files.pythonhosted.org/packages/b0/06/8047e9b8eea412a8103087812316a517a114595744179a6ab7393eedb888/biotree_tools-0.0.1.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.1
2023-04-20T16:49:46,855   Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/7f/8b/7af0fcf741c970ea13b88d93902c567f66457e7cb4d52da0dcef80732035/biotree_tools-0.0.2-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6)
2023-04-20T16:49:46,856   Found link https://files.pythonhosted.org/packages/16/37/fac9af14a888f029e2be1c84e79c758a757caee0a8c3d8845c1634b21296/biotree_tools-0.0.2.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.2
2023-04-20T16:49:46,857 Fetching project page and analyzing links: https://www.piwheels.org/simple/biotree-tools/
2023-04-20T16:49:46,858 Getting page https://www.piwheels.org/simple/biotree-tools/
2023-04-20T16:49:46,860 Found index url https://www.piwheels.org/simple
2023-04-20T16:49:47,071 Fetched page https://www.piwheels.org/simple/biotree-tools/ as text/html
2023-04-20T16:49:47,073 Skipping link: not a file: https://www.piwheels.org/simple/biotree-tools/
2023-04-20T16:49:47,074 Skipping link: not a file: https://pypi.org/simple/biotree-tools/
2023-04-20T16:49:47,108 Given no hashes to check 1 links for project 'biotree-tools': discarding no candidates
2023-04-20T16:49:47,140 Collecting biotree-tools==0.0.1
2023-04-20T16:49:47,144   Created temporary directory: /tmp/pip-unpack-yhb21xdz
2023-04-20T16:49:47,320   Downloading biotree_tools-0.0.1.tar.gz (141 kB)
2023-04-20T16:49:47,549   Added biotree-tools==0.0.1 from https://files.pythonhosted.org/packages/b0/06/8047e9b8eea412a8103087812316a517a114595744179a6ab7393eedb888/biotree_tools-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-quov2y3_'
2023-04-20T16:49:47,558   Created temporary directory: /tmp/pip-build-env-zv_vmb29
2023-04-20T16:49:47,580   Installing build dependencies: started
2023-04-20T16:49:47,582   Running command pip subprocess to install build dependencies
2023-04-20T16:49:50,520   Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7)
2023-04-20T16:49:51,929   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-04-20T16:49:51,990   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-04-20T16:49:56,063   Collecting setuptools>=42
2023-04-20T16:49:56,336     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.7.0-py3-none-any.whl (1.1 MB)
2023-04-20T16:49:57,006   Collecting wheel
2023-04-20T16:49:57,044     Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB)
2023-04-20T16:50:04,286   Installing collected packages: wheel, setuptools
2023-04-20T16:50:04,757     Creating /tmp/pip-build-env-zv_vmb29/overlay/bin
2023-04-20T16:50:04,762     changing mode of /tmp/pip-build-env-zv_vmb29/overlay/bin/wheel to 755
2023-04-20T16:50:09,205   Successfully installed setuptools-67.7.0 wheel-0.40.0

2023-04-20T16:50:09,720   [notice] A new release of pip is available: 23.0.1 -> 23.1
2023-04-20T16:50:09,720   [notice] To update, run: python3 -m pip install --upgrade pip
2023-04-20T16:50:10,230   Installing build dependencies: finished with status 'done'
2023-04-20T16:50:10,243   Getting requirements to build wheel: started
2023-04-20T16:50:10,246   Running command Getting requirements to build wheel
2023-04-20T16:50:11,860   running egg_info
2023-04-20T16:50:11,872   writing src/biotree_tools.egg-info/PKG-INFO
2023-04-20T16:50:11,876   writing dependency_links to src/biotree_tools.egg-info/dependency_links.txt
2023-04-20T16:50:11,881   writing requirements to src/biotree_tools.egg-info/requires.txt
2023-04-20T16:50:11,884   writing top-level names to src/biotree_tools.egg-info/top_level.txt
2023-04-20T16:50:11,929   reading manifest file 'src/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:11,934   adding license file 'LICENSE'
2023-04-20T16:50:11,940   writing manifest file 'src/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:12,061   Getting requirements to build wheel: finished with status 'done'
2023-04-20T16:50:12,083   Created temporary directory: /tmp/pip-modern-metadata-1rrghtnp
2023-04-20T16:50:12,089   Preparing metadata (pyproject.toml): started
2023-04-20T16:50:12,091   Running command Preparing metadata (pyproject.toml)
2023-04-20T16:50:13,414   running dist_info
2023-04-20T16:50:13,458   creating /tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info
2023-04-20T16:50:13,469   writing /tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/PKG-INFO
2023-04-20T16:50:13,474   writing dependency_links to /tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/dependency_links.txt
2023-04-20T16:50:13,480   writing requirements to /tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/requires.txt
2023-04-20T16:50:13,482   writing top-level names to /tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/top_level.txt
2023-04-20T16:50:13,486   writing manifest file '/tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:13,526   reading manifest file '/tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:13,531   adding license file 'LICENSE'
2023-04-20T16:50:13,538   writing manifest file '/tmp/pip-modern-metadata-1rrghtnp/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:13,540   creating '/tmp/pip-modern-metadata-1rrghtnp/biotree_tools-0.0.1.dist-info'
2023-04-20T16:50:13,859   Preparing metadata (pyproject.toml): finished with status 'done'
2023-04-20T16:50:13,875   Source in /tmp/pip-wheel-jzk55xvi/biotree-tools_e6f86b2a2eef4aa8bf8a0dabc182b764 has version 0.0.1, which satisfies requirement biotree-tools==0.0.1 from https://files.pythonhosted.org/packages/b0/06/8047e9b8eea412a8103087812316a517a114595744179a6ab7393eedb888/biotree_tools-0.0.1.tar.gz
2023-04-20T16:50:13,877   Removed biotree-tools==0.0.1 from https://files.pythonhosted.org/packages/b0/06/8047e9b8eea412a8103087812316a517a114595744179a6ab7393eedb888/biotree_tools-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-quov2y3_'
2023-04-20T16:50:13,891 Created temporary directory: /tmp/pip-unpack-1c7dparx
2023-04-20T16:50:13,892 Building wheels for collected packages: biotree-tools
2023-04-20T16:50:13,903   Created temporary directory: /tmp/pip-wheel-2savk395
2023-04-20T16:50:13,903   Destination directory: /tmp/pip-wheel-2savk395
2023-04-20T16:50:13,909   Building wheel for biotree-tools (pyproject.toml): started
2023-04-20T16:50:13,911   Running command Building wheel for biotree-tools (pyproject.toml)
2023-04-20T16:50:15,344   running bdist_wheel
2023-04-20T16:50:15,421   running build
2023-04-20T16:50:15,423   running build_py
2023-04-20T16:50:15,441   creating build
2023-04-20T16:50:15,443   creating build/lib
2023-04-20T16:50:15,445   creating build/lib/biotree_tools
2023-04-20T16:50:15,448   copying src/biotree_tools/__init__.py -> build/lib/biotree_tools
2023-04-20T16:50:15,453   copying src/biotree_tools/alignment_tools.py -> build/lib/biotree_tools
2023-04-20T16:50:15,459   copying src/biotree_tools/MMlib3.py -> build/lib/biotree_tools
2023-04-20T16:50:15,487   copying src/biotree_tools/phylo_context.py -> build/lib/biotree_tools
2023-04-20T16:50:15,493   copying src/biotree_tools/tree_classes.py -> build/lib/biotree_tools
2023-04-20T16:50:15,502   copying src/biotree_tools/_version.py -> build/lib/biotree_tools
2023-04-20T16:50:15,506   copying src/biotree_tools/show_tree.py -> build/lib/biotree_tools
2023-04-20T16:50:15,514   copying src/biotree_tools/tree_tools.py -> build/lib/biotree_tools
2023-04-20T16:50:15,555   installing to build/bdist.linux-armv7l/wheel
2023-04-20T16:50:15,556   running install
2023-04-20T16:50:15,620   running install_lib
2023-04-20T16:50:15,640   creating build/bdist.linux-armv7l
2023-04-20T16:50:15,642   creating build/bdist.linux-armv7l/wheel
2023-04-20T16:50:15,646   creating build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,649   copying build/lib/biotree_tools/__init__.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,653   copying build/lib/biotree_tools/alignment_tools.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,660   copying build/lib/biotree_tools/MMlib3.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,686   copying build/lib/biotree_tools/phylo_context.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,692   copying build/lib/biotree_tools/tree_classes.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,701   copying build/lib/biotree_tools/_version.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,706   copying build/lib/biotree_tools/show_tree.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,715   copying build/lib/biotree_tools/tree_tools.py -> build/bdist.linux-armv7l/wheel/biotree_tools
2023-04-20T16:50:15,719   running install_egg_info
2023-04-20T16:50:15,773   running egg_info
2023-04-20T16:50:15,782   writing src/biotree_tools.egg-info/PKG-INFO
2023-04-20T16:50:15,785   writing dependency_links to src/biotree_tools.egg-info/dependency_links.txt
2023-04-20T16:50:15,789   writing requirements to src/biotree_tools.egg-info/requires.txt
2023-04-20T16:50:15,791   writing top-level names to src/biotree_tools.egg-info/top_level.txt
2023-04-20T16:50:15,809   reading manifest file 'src/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:15,813   adding license file 'LICENSE'
2023-04-20T16:50:15,819   writing manifest file 'src/biotree_tools.egg-info/SOURCES.txt'
2023-04-20T16:50:15,822   Copying src/biotree_tools.egg-info to build/bdist.linux-armv7l/wheel/biotree_tools-0.0.1-py3.7.egg-info
2023-04-20T16:50:15,851   running install_scripts
2023-04-20T16:50:15,883   creating build/bdist.linux-armv7l/wheel/biotree_tools-0.0.1.dist-info/WHEEL
2023-04-20T16:50:15,888   creating '/tmp/pip-wheel-2savk395/.tmp-zwa769lf/biotree_tools-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-04-20T16:50:16,021   adding 'biotree_tools/MMlib3.py'
2023-04-20T16:50:16,030   adding 'biotree_tools/__init__.py'
2023-04-20T16:50:16,033   adding 'biotree_tools/_version.py'
2023-04-20T16:50:16,042   adding 'biotree_tools/alignment_tools.py'
2023-04-20T16:50:16,049   adding 'biotree_tools/phylo_context.py'
2023-04-20T16:50:16,064   adding 'biotree_tools/show_tree.py'
2023-04-20T16:50:16,088   adding 'biotree_tools/tree_classes.py'
2023-04-20T16:50:16,093   adding 'biotree_tools/tree_tools.py'
2023-04-20T16:50:16,099   adding 'biotree_tools-0.0.1.dist-info/LICENSE'
2023-04-20T16:50:16,101   adding 'biotree_tools-0.0.1.dist-info/METADATA'
2023-04-20T16:50:16,103   adding 'biotree_tools-0.0.1.dist-info/WHEEL'
2023-04-20T16:50:16,105   adding 'biotree_tools-0.0.1.dist-info/top_level.txt'
2023-04-20T16:50:16,107   adding 'biotree_tools-0.0.1.dist-info/RECORD'
2023-04-20T16:50:16,123   removing build/bdist.linux-armv7l/wheel
2023-04-20T16:50:16,273   Building wheel for biotree-tools (pyproject.toml): finished with status 'done'
2023-04-20T16:50:16,295   Created wheel for biotree-tools: filename=biotree_tools-0.0.1-py3-none-any.whl size=144882 sha256=9a16ef02e1b8f55c830b9f9770daaeb945d02f5afb48e1914d35b2f919ab2ebc
2023-04-20T16:50:16,298   Stored in directory: /tmp/pip-ephem-wheel-cache-wngp2mw0/wheels/99/ec/cb/0dc50ba251adf212119716561758c5d22913cbce8bdb27add1
2023-04-20T16:50:16,324 Successfully built biotree-tools
2023-04-20T16:50:16,345 Removed build tracker: '/tmp/pip-build-tracker-quov2y3_'