2023-04-20T21:22:00,151 Created temporary directory: /tmp/pip-ephem-wheel-cache-emtzt7xi 2023-04-20T21:22:00,156 Created temporary directory: /tmp/pip-build-tracker-6s2cb7q_ 2023-04-20T21:22:00,157 Initialized build tracking at /tmp/pip-build-tracker-6s2cb7q_ 2023-04-20T21:22:00,157 Created build tracker: /tmp/pip-build-tracker-6s2cb7q_ 2023-04-20T21:22:00,158 Entered build tracker: /tmp/pip-build-tracker-6s2cb7q_ 2023-04-20T21:22:00,159 Created temporary directory: /tmp/pip-wheel-22tie2gy 2023-04-20T21:22:00,170 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-20T21:22:00,175 Created temporary directory: /tmp/pip-ephem-wheel-cache-npo8xep0 2023-04-20T21:22:00,231 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-20T21:22:00,238 2 location(s) to search for versions of biotree-tools: 2023-04-20T21:22:00,238 * https://pypi.org/simple/biotree-tools/ 2023-04-20T21:22:00,238 * https://www.piwheels.org/simple/biotree-tools/ 2023-04-20T21:22:00,239 Fetching project page and analyzing links: https://pypi.org/simple/biotree-tools/ 2023-04-20T21:22:00,240 Getting page https://pypi.org/simple/biotree-tools/ 2023-04-20T21:22:00,244 Found index url https://pypi.org/simple 2023-04-20T21:22:00,359 Fetched page https://pypi.org/simple/biotree-tools/ as application/vnd.pypi.simple.v1+json 2023-04-20T21:22:00,365 Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/a1/44/cbcecd3b4bb6d830f301b56e04234622b53a0929791392adc873771b9eff/biotree_tools-0.0.1-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,367 Found link https://files.pythonhosted.org/packages/b0/06/8047e9b8eea412a8103087812316a517a114595744179a6ab7393eedb888/biotree_tools-0.0.1.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.1 2023-04-20T21:22:00,367 Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/7f/8b/7af0fcf741c970ea13b88d93902c567f66457e7cb4d52da0dcef80732035/biotree_tools-0.0.2-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,369 Found link https://files.pythonhosted.org/packages/16/37/fac9af14a888f029e2be1c84e79c758a757caee0a8c3d8845c1634b21296/biotree_tools-0.0.2.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.2 2023-04-20T21:22:00,370 Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/00/d9/d31ba6805d8f7ae02eae44738d91fe2f9dbf7dde0931d210eb7e0771772e/biotree_tools-0.0.3-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,371 Found link https://files.pythonhosted.org/packages/04/ab/dcd3b65ee596195abf1e2782154ac65a2f3e69973300b0610c65452a15c7/biotree_tools-0.0.3.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.3 2023-04-20T21:22:00,372 Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/74/c4/1ec6a66aae7112f76fed6cc38fe29086b97134256737cbcb42bf52f209de/biotree_tools-0.0.4-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,373 Found link https://files.pythonhosted.org/packages/bd/fd/53d31039ac6d66db82292208fc1708db38bf84c1a4a6217dcb7ca5a2c570/biotree_tools-0.0.4.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.4 2023-04-20T21:22:00,373 Skipping link: No binaries permitted for biotree-tools: https://files.pythonhosted.org/packages/f7/36/847ed1e61f7880e6d733ae77c60f629eced5ea5be9bd2adf1997bad21d61/biotree_tools-0.0.5-py3-none-any.whl (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,375 Found link https://files.pythonhosted.org/packages/52/44/3ba7b34da073ef978299a3165593aa5241eb750eeba042ea8ae4ad5e5a70/biotree_tools-0.0.5.tar.gz (from https://pypi.org/simple/biotree-tools/) (requires-python:>=3.6), version: 0.0.5 2023-04-20T21:22:00,376 Fetching project page and analyzing links: https://www.piwheels.org/simple/biotree-tools/ 2023-04-20T21:22:00,376 Getting page https://www.piwheels.org/simple/biotree-tools/ 2023-04-20T21:22:00,379 Found index url https://www.piwheels.org/simple 2023-04-20T21:22:00,622 Fetched page https://www.piwheels.org/simple/biotree-tools/ as text/html 2023-04-20T21:22:00,626 Skipping link: No binaries permitted for biotree-tools: https://www.piwheels.org/simple/biotree-tools/biotree_tools-0.0.3-py3-none-any.whl#sha256=727bc3d8a07cc4a95222b916a17e3d3cde376531744aca1547378210f3179c67 (from https://www.piwheels.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,627 Skipping link: No binaries permitted for biotree-tools: https://www.piwheels.org/simple/biotree-tools/biotree_tools-0.0.2-py3-none-any.whl#sha256=6df32a5c595307c033b5fcafbf76fd140b43a879c5415755fdfae1d42c78b3bc (from https://www.piwheels.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,627 Skipping link: No binaries permitted for biotree-tools: https://www.piwheels.org/simple/biotree-tools/biotree_tools-0.0.1-py3-none-any.whl#sha256=9a16ef02e1b8f55c830b9f9770daaeb945d02f5afb48e1914d35b2f919ab2ebc (from https://www.piwheels.org/simple/biotree-tools/) (requires-python:>=3.6) 2023-04-20T21:22:00,628 Skipping link: not a file: https://www.piwheels.org/simple/biotree-tools/ 2023-04-20T21:22:00,628 Skipping link: not a file: https://pypi.org/simple/biotree-tools/ 2023-04-20T21:22:00,663 Given no hashes to check 1 links for project 'biotree-tools': discarding no candidates 2023-04-20T21:22:00,693 Collecting biotree-tools==0.0.5 2023-04-20T21:22:00,697 Created temporary directory: /tmp/pip-unpack-9y79vxyl 2023-04-20T21:22:00,884 Downloading biotree_tools-0.0.5.tar.gz (142 kB) 2023-04-20T21:22:01,099 Added biotree-tools==0.0.5 from https://files.pythonhosted.org/packages/52/44/3ba7b34da073ef978299a3165593aa5241eb750eeba042ea8ae4ad5e5a70/biotree_tools-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-6s2cb7q_' 2023-04-20T21:22:01,108 Created temporary directory: /tmp/pip-build-env-8tffsc55 2023-04-20T21:22:01,128 Installing build dependencies: started 2023-04-20T21:22:01,131 Running command pip subprocess to install build dependencies 2023-04-20T21:22:03,901 Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-04-20T21:22:05,352 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-04-20T21:22:05,409 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-04-20T21:22:09,432 Collecting setuptools>=42 2023-04-20T21:22:09,678 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.7.0-py3-none-any.whl (1.1 MB) 2023-04-20T21:22:10,315 Collecting wheel 2023-04-20T21:22:10,350 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-04-20T21:22:19,296 Installing collected packages: wheel, setuptools 2023-04-20T21:22:19,732 Creating /tmp/pip-build-env-8tffsc55/overlay/bin 2023-04-20T21:22:19,737 changing mode of /tmp/pip-build-env-8tffsc55/overlay/bin/wheel to 755 2023-04-20T21:22:24,117 Successfully installed setuptools-67.7.0 wheel-0.40.0 2023-04-20T21:22:24,628 [notice] A new release of pip is available: 23.0.1 -> 23.1 2023-04-20T21:22:24,628 [notice] To update, run: python3 -m pip install --upgrade pip 2023-04-20T21:22:25,125 Installing build dependencies: finished with status 'done' 2023-04-20T21:22:25,136 Getting requirements to build wheel: started 2023-04-20T21:22:25,138 Running command Getting requirements to build wheel 2023-04-20T21:22:26,631 running egg_info 2023-04-20T21:22:26,641 writing src/biotree_tools.egg-info/PKG-INFO 2023-04-20T21:22:26,645 writing dependency_links to src/biotree_tools.egg-info/dependency_links.txt 2023-04-20T21:22:26,650 writing requirements to src/biotree_tools.egg-info/requires.txt 2023-04-20T21:22:26,652 writing top-level names to src/biotree_tools.egg-info/top_level.txt 2023-04-20T21:22:26,693 reading manifest file 'src/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:26,697 adding license file 'LICENSE' 2023-04-20T21:22:26,703 writing manifest file 'src/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:26,819 Getting requirements to build wheel: finished with status 'done' 2023-04-20T21:22:26,839 Created temporary directory: /tmp/pip-modern-metadata-_27j70ma 2023-04-20T21:22:26,845 Preparing metadata (pyproject.toml): started 2023-04-20T21:22:26,847 Running command Preparing metadata (pyproject.toml) 2023-04-20T21:22:28,113 running dist_info 2023-04-20T21:22:28,164 creating /tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info 2023-04-20T21:22:28,173 writing /tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/PKG-INFO 2023-04-20T21:22:28,177 writing dependency_links to /tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/dependency_links.txt 2023-04-20T21:22:28,182 writing requirements to /tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/requires.txt 2023-04-20T21:22:28,184 writing top-level names to /tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/top_level.txt 2023-04-20T21:22:28,187 writing manifest file '/tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:28,224 reading manifest file '/tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:28,229 adding license file 'LICENSE' 2023-04-20T21:22:28,234 writing manifest file '/tmp/pip-modern-metadata-_27j70ma/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:28,236 creating '/tmp/pip-modern-metadata-_27j70ma/biotree_tools-0.0.5.dist-info' 2023-04-20T21:22:28,539 Preparing metadata (pyproject.toml): finished with status 'done' 2023-04-20T21:22:28,553 Source in /tmp/pip-wheel-22tie2gy/biotree-tools_4c61040f09674f2ab960b7a209fb6f21 has version 0.0.5, which satisfies requirement biotree-tools==0.0.5 from https://files.pythonhosted.org/packages/52/44/3ba7b34da073ef978299a3165593aa5241eb750eeba042ea8ae4ad5e5a70/biotree_tools-0.0.5.tar.gz 2023-04-20T21:22:28,555 Removed biotree-tools==0.0.5 from https://files.pythonhosted.org/packages/52/44/3ba7b34da073ef978299a3165593aa5241eb750eeba042ea8ae4ad5e5a70/biotree_tools-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-6s2cb7q_' 2023-04-20T21:22:28,568 Created temporary directory: /tmp/pip-unpack-f94i00u6 2023-04-20T21:22:28,569 Building wheels for collected packages: biotree-tools 2023-04-20T21:22:28,578 Created temporary directory: /tmp/pip-wheel-wsdor__l 2023-04-20T21:22:28,579 Destination directory: /tmp/pip-wheel-wsdor__l 2023-04-20T21:22:28,584 Building wheel for biotree-tools (pyproject.toml): started 2023-04-20T21:22:28,586 Running command Building wheel for biotree-tools (pyproject.toml) 2023-04-20T21:22:30,054 running bdist_wheel 2023-04-20T21:22:30,129 running build 2023-04-20T21:22:30,129 running build_py 2023-04-20T21:22:30,146 creating build 2023-04-20T21:22:30,147 creating build/lib 2023-04-20T21:22:30,148 creating build/lib/biotree_tools 2023-04-20T21:22:30,151 copying src/biotree_tools/_version.py -> build/lib/biotree_tools 2023-04-20T21:22:30,154 copying src/biotree_tools/phylo_context.py -> build/lib/biotree_tools 2023-04-20T21:22:30,158 copying src/biotree_tools/tree_tools.py -> build/lib/biotree_tools 2023-04-20T21:22:30,162 copying src/biotree_tools/tree_classes.py -> build/lib/biotree_tools 2023-04-20T21:22:30,172 copying src/biotree_tools/alignment_tools.py -> build/lib/biotree_tools 2023-04-20T21:22:30,177 copying src/biotree_tools/__init__.py -> build/lib/biotree_tools 2023-04-20T21:22:30,181 copying src/biotree_tools/MMlib3.py -> build/lib/biotree_tools 2023-04-20T21:22:30,208 copying src/biotree_tools/show_tree.py -> build/lib/biotree_tools 2023-04-20T21:22:30,247 installing to build/bdist.linux-armv7l/wheel 2023-04-20T21:22:30,247 running install 2023-04-20T21:22:30,308 running install_lib 2023-04-20T21:22:30,327 creating build/bdist.linux-armv7l 2023-04-20T21:22:30,328 creating build/bdist.linux-armv7l/wheel 2023-04-20T21:22:30,332 creating build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,334 copying build/lib/biotree_tools/_version.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,338 copying build/lib/biotree_tools/phylo_context.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,344 copying build/lib/biotree_tools/tree_tools.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,348 copying build/lib/biotree_tools/tree_classes.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,357 copying build/lib/biotree_tools/alignment_tools.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,362 copying build/lib/biotree_tools/__init__.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,366 copying build/lib/biotree_tools/MMlib3.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,388 copying build/lib/biotree_tools/show_tree.py -> build/bdist.linux-armv7l/wheel/biotree_tools 2023-04-20T21:22:30,395 running install_egg_info 2023-04-20T21:22:30,447 running egg_info 2023-04-20T21:22:30,455 writing src/biotree_tools.egg-info/PKG-INFO 2023-04-20T21:22:30,459 writing dependency_links to src/biotree_tools.egg-info/dependency_links.txt 2023-04-20T21:22:30,463 writing requirements to src/biotree_tools.egg-info/requires.txt 2023-04-20T21:22:30,465 writing top-level names to src/biotree_tools.egg-info/top_level.txt 2023-04-20T21:22:30,482 reading manifest file 'src/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:30,486 adding license file 'LICENSE' 2023-04-20T21:22:30,492 writing manifest file 'src/biotree_tools.egg-info/SOURCES.txt' 2023-04-20T21:22:30,495 Copying src/biotree_tools.egg-info to build/bdist.linux-armv7l/wheel/biotree_tools-0.0.5-py3.7.egg-info 2023-04-20T21:22:30,516 running install_scripts 2023-04-20T21:22:30,548 creating build/bdist.linux-armv7l/wheel/biotree_tools-0.0.5.dist-info/WHEEL 2023-04-20T21:22:30,554 creating '/tmp/pip-wheel-wsdor__l/.tmp-8zmbgua9/biotree_tools-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-04-20T21:22:30,682 adding 'biotree_tools/MMlib3.py' 2023-04-20T21:22:30,691 adding 'biotree_tools/__init__.py' 2023-04-20T21:22:30,694 adding 'biotree_tools/_version.py' 2023-04-20T21:22:30,702 adding 'biotree_tools/alignment_tools.py' 2023-04-20T21:22:30,709 adding 'biotree_tools/phylo_context.py' 2023-04-20T21:22:30,724 adding 'biotree_tools/show_tree.py' 2023-04-20T21:22:30,747 adding 'biotree_tools/tree_classes.py' 2023-04-20T21:22:30,753 adding 'biotree_tools/tree_tools.py' 2023-04-20T21:22:30,758 adding 'biotree_tools-0.0.5.dist-info/LICENSE' 2023-04-20T21:22:30,760 adding 'biotree_tools-0.0.5.dist-info/METADATA' 2023-04-20T21:22:30,762 adding 'biotree_tools-0.0.5.dist-info/WHEEL' 2023-04-20T21:22:30,764 adding 'biotree_tools-0.0.5.dist-info/top_level.txt' 2023-04-20T21:22:30,765 adding 'biotree_tools-0.0.5.dist-info/RECORD' 2023-04-20T21:22:30,773 removing build/bdist.linux-armv7l/wheel 2023-04-20T21:22:30,917 Building wheel for biotree-tools (pyproject.toml): finished with status 'done' 2023-04-20T21:22:30,937 Created wheel for biotree-tools: filename=biotree_tools-0.0.5-py3-none-any.whl size=145139 sha256=edecfbffd44175abea21f4dfbccb04d4cc78eb0176a58e722f9185e5fed64bee 2023-04-20T21:22:30,939 Stored in directory: /tmp/pip-ephem-wheel-cache-npo8xep0/wheels/c9/a0/c9/79fc416bb0f8f87ff207f1ad4e3c880589e2f96902d7bf3828 2023-04-20T21:22:30,964 Successfully built biotree-tools 2023-04-20T21:22:30,982 Removed build tracker: '/tmp/pip-build-tracker-6s2cb7q_'