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https://www.piwheels.org/simple/sequana-pipetools/sequana_pipetools-0.2.0-py3-none-any.whl#sha256=2f3db01fe4ed0c841726fddf2ba86a1cac78148613e0ea60e3d0f86484c7c0ec (from https://www.piwheels.org/simple/sequana-pipetools/) 2023-05-13T09:51:43,014 Skipping link: No binaries permitted for sequana-pipetools: https://www.piwheels.org/simple/sequana-pipetools/sequana_pipetools-0.1.2-py3-none-any.whl#sha256=8c946b15488e7e3787402306dd7813fe7318eee0da27b84c383d8738e8ea4282 (from https://www.piwheels.org/simple/sequana-pipetools/) 2023-05-13T09:51:43,014 Skipping link: No binaries permitted for sequana-pipetools: https://www.piwheels.org/simple/sequana-pipetools/sequana_pipetools-0.1.1-py3-none-any.whl#sha256=f453c8d48fdf97f7cf39802fde58bec7752fed0dde271f9dbfc08545c5128927 (from https://www.piwheels.org/simple/sequana-pipetools/) 2023-05-13T09:51:43,015 Skipping link: No binaries permitted for sequana-pipetools: https://www.piwheels.org/simple/sequana-pipetools/sequana_pipetools-0.1.0-py3-none-any.whl#sha256=6e8ee761300ecadaa2eef58b98caa408bef975e49299a4c9be190e2998fdabdd (from https://www.piwheels.org/simple/sequana-pipetools/) 2023-05-13T09:51:43,015 Skipping link: not a file: https://www.piwheels.org/simple/sequana-pipetools/ 2023-05-13T09:51:43,016 Skipping link: not a file: https://pypi.org/simple/sequana-pipetools/ 2023-05-13T09:51:43,069 Given no hashes to check 1 links for project 'sequana-pipetools': discarding no candidates 2023-05-13T09:51:43,101 Collecting sequana-pipetools==0.12.1 2023-05-13T09:51:43,106 Created temporary directory: /tmp/pip-unpack-tzzvi3d8 2023-05-13T09:51:43,293 Downloading sequana_pipetools-0.12.1.tar.gz (50 kB) 2023-05-13T09:51:43,498 Added sequana-pipetools==0.12.1 from https://files.pythonhosted.org/packages/67/1e/c90de1bc3cbc0e92b232b505f468105f1ddf075603b0b8107cf0b5c627f6/sequana_pipetools-0.12.1.tar.gz to build tracker '/tmp/pip-build-tracker-izc97i0t' 2023-05-13T09:51:43,502 Running setup.py (path:/tmp/pip-wheel-2lj3o6th/sequana-pipetools_5a24cdc467db4215b9d6d6904a625b55/setup.py) egg_info for package sequana-pipetools 2023-05-13T09:51:43,503 Created temporary directory: /tmp/pip-pip-egg-info-q804vwf3 2023-05-13T09:51:43,504 Preparing metadata (setup.py): started 2023-05-13T09:51:43,506 Running command python setup.py egg_info 2023-05-13T09:51:45,011 running egg_info 2023-05-13T09:51:45,016 creating /tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info 2023-05-13T09:51:45,078 writing /tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/PKG-INFO 2023-05-13T09:51:45,084 writing dependency_links to /tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/dependency_links.txt 2023-05-13T09:51:45,088 writing entry points to /tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/entry_points.txt 2023-05-13T09:51:45,091 writing requirements to /tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/requires.txt 2023-05-13T09:51:45,093 writing top-level names to /tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/top_level.txt 2023-05-13T09:51:45,095 writing manifest file '/tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/SOURCES.txt' 2023-05-13T09:51:45,311 reading manifest file '/tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/SOURCES.txt' 2023-05-13T09:51:45,315 reading manifest template 'MANIFEST.in' 2023-05-13T09:51:45,318 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-05-13T09:51:45,319 warning: no previously-included files matching '*pyc' found under directory '*' 2023-05-13T09:51:45,323 no previously-included directories found matching 'tests' 2023-05-13T09:51:45,329 writing manifest file '/tmp/pip-pip-egg-info-q804vwf3/sequana_pipetools.egg-info/SOURCES.txt' 2023-05-13T09:51:45,450 Preparing metadata (setup.py): finished with status 'done' 2023-05-13T09:51:45,466 Source in /tmp/pip-wheel-2lj3o6th/sequana-pipetools_5a24cdc467db4215b9d6d6904a625b55 has version 0.12.1, which satisfies requirement sequana-pipetools==0.12.1 from https://files.pythonhosted.org/packages/67/1e/c90de1bc3cbc0e92b232b505f468105f1ddf075603b0b8107cf0b5c627f6/sequana_pipetools-0.12.1.tar.gz 2023-05-13T09:51:45,468 Removed sequana-pipetools==0.12.1 from https://files.pythonhosted.org/packages/67/1e/c90de1bc3cbc0e92b232b505f468105f1ddf075603b0b8107cf0b5c627f6/sequana_pipetools-0.12.1.tar.gz from build tracker '/tmp/pip-build-tracker-izc97i0t' 2023-05-13T09:51:45,482 Created temporary directory: /tmp/pip-unpack-9yz20sri 2023-05-13T09:51:45,483 Building wheels for collected packages: sequana-pipetools 2023-05-13T09:51:45,492 Created temporary directory: /tmp/pip-wheel-il63h5i5 2023-05-13T09:51:45,493 Building wheel for sequana-pipetools (setup.py): started 2023-05-13T09:51:45,495 Destination directory: /tmp/pip-wheel-il63h5i5 2023-05-13T09:51:45,495 Running command python setup.py bdist_wheel 2023-05-13T09:51:47,073 running bdist_wheel 2023-05-13T09:51:47,769 running build 2023-05-13T09:51:47,770 running build_py 2023-05-13T09:51:47,840 creating build 2023-05-13T09:51:47,841 creating build/lib 2023-05-13T09:51:47,843 creating build/lib/sequana_pipetools 2023-05-13T09:51:47,845 copying sequana_pipetools/options.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,850 copying sequana_pipetools/slurm.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,855 copying sequana_pipetools/sequana_manager.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,861 copying sequana_pipetools/misc.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,864 copying sequana_pipetools/__init__.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,868 copying sequana_pipetools/errors.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,871 copying sequana_pipetools/info.py -> build/lib/sequana_pipetools 2023-05-13T09:51:47,876 creating build/lib/sequana_pipetools/resources 2023-05-13T09:51:47,878 copying sequana_pipetools/resources/ext.py -> build/lib/sequana_pipetools/resources 2023-05-13T09:51:47,881 copying sequana_pipetools/resources/__init__.py -> build/lib/sequana_pipetools/resources 2023-05-13T09:51:47,887 creating build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,889 copying sequana_pipetools/snaketools/dot_parser.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,893 copying sequana_pipetools/snaketools/pipeline_manager.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,898 copying sequana_pipetools/snaketools/pipeline_utils.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,902 copying sequana_pipetools/snaketools/sequana_config.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,907 copying sequana_pipetools/snaketools/__init__.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,911 copying sequana_pipetools/snaketools/profile.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,914 copying sequana_pipetools/snaketools/file_factory.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,919 copying sequana_pipetools/snaketools/module_finder.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,923 copying sequana_pipetools/snaketools/module.py -> build/lib/sequana_pipetools/snaketools 2023-05-13T09:51:47,929 creating build/lib/sequana_pipetools/scripts 2023-05-13T09:51:47,931 copying sequana_pipetools/scripts/completion.py -> build/lib/sequana_pipetools/scripts 2023-05-13T09:51:47,935 copying sequana_pipetools/scripts/slurm.py -> build/lib/sequana_pipetools/scripts 2023-05-13T09:51:47,939 copying sequana_pipetools/scripts/__init__.py -> build/lib/sequana_pipetools/scripts 2023-05-13T09:51:47,961 copying sequana_pipetools/resources/local.yaml -> build/lib/sequana_pipetools/resources 2023-05-13T09:51:47,965 copying sequana_pipetools/resources/slurm.yaml -> build/lib/sequana_pipetools/resources 2023-05-13T09:51:48,048 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-13T09:51:48,048 !! 2023-05-13T09:51:48,049 ******************************************************************************** 2023-05-13T09:51:48,049 Please avoid running ``setup.py`` directly. 2023-05-13T09:51:48,050 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-13T09:51:48,050 other standards-based tools. 2023-05-13T09:51:48,051 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-13T09:51:48,051 ******************************************************************************** 2023-05-13T09:51:48,052 !! 2023-05-13T09:51:48,052 self.initialize_options() 2023-05-13T09:51:48,113 installing to build/bdist.linux-armv7l/wheel 2023-05-13T09:51:48,114 running install 2023-05-13T09:51:48,173 running install_lib 2023-05-13T09:51:48,240 creating build/bdist.linux-armv7l 2023-05-13T09:51:48,241 creating build/bdist.linux-armv7l/wheel 2023-05-13T09:51:48,245 creating build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,248 creating build/bdist.linux-armv7l/wheel/sequana_pipetools/resources 2023-05-13T09:51:48,250 copying build/lib/sequana_pipetools/resources/ext.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/resources 2023-05-13T09:51:48,254 copying build/lib/sequana_pipetools/resources/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/resources 2023-05-13T09:51:48,257 copying build/lib/sequana_pipetools/resources/local.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipetools/resources 2023-05-13T09:51:48,261 copying build/lib/sequana_pipetools/resources/slurm.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipetools/resources 2023-05-13T09:51:48,264 copying build/lib/sequana_pipetools/options.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,270 copying build/lib/sequana_pipetools/slurm.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,275 creating build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,277 copying build/lib/sequana_pipetools/snaketools/dot_parser.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,281 copying build/lib/sequana_pipetools/snaketools/pipeline_manager.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,287 copying build/lib/sequana_pipetools/snaketools/pipeline_utils.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,291 copying build/lib/sequana_pipetools/snaketools/sequana_config.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,296 copying build/lib/sequana_pipetools/snaketools/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,300 copying build/lib/sequana_pipetools/snaketools/profile.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,303 copying build/lib/sequana_pipetools/snaketools/file_factory.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,309 copying build/lib/sequana_pipetools/snaketools/module_finder.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,313 copying build/lib/sequana_pipetools/snaketools/module.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/snaketools 2023-05-13T09:51:48,318 copying build/lib/sequana_pipetools/sequana_manager.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,325 creating build/bdist.linux-armv7l/wheel/sequana_pipetools/scripts 2023-05-13T09:51:48,327 copying build/lib/sequana_pipetools/scripts/completion.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/scripts 2023-05-13T09:51:48,332 copying build/lib/sequana_pipetools/scripts/slurm.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/scripts 2023-05-13T09:51:48,336 copying build/lib/sequana_pipetools/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools/scripts 2023-05-13T09:51:48,339 copying build/lib/sequana_pipetools/misc.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,343 copying build/lib/sequana_pipetools/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,346 copying build/lib/sequana_pipetools/errors.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,350 copying build/lib/sequana_pipetools/info.py -> build/bdist.linux-armv7l/wheel/sequana_pipetools 2023-05-13T09:51:48,353 running install_egg_info 2023-05-13T09:51:48,514 running egg_info 2023-05-13T09:51:48,577 writing sequana_pipetools.egg-info/PKG-INFO 2023-05-13T09:51:48,582 writing dependency_links to sequana_pipetools.egg-info/dependency_links.txt 2023-05-13T09:51:48,586 writing entry points to sequana_pipetools.egg-info/entry_points.txt 2023-05-13T09:51:48,589 writing requirements to sequana_pipetools.egg-info/requires.txt 2023-05-13T09:51:48,592 writing top-level names to sequana_pipetools.egg-info/top_level.txt 2023-05-13T09:51:48,677 reading manifest file 'sequana_pipetools.egg-info/SOURCES.txt' 2023-05-13T09:51:48,683 reading manifest template 'MANIFEST.in' 2023-05-13T09:51:48,686 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-05-13T09:51:48,687 warning: no previously-included files matching '*pyc' found under directory '*' 2023-05-13T09:51:48,691 no previously-included directories found matching 'tests' 2023-05-13T09:51:48,699 writing manifest file 'sequana_pipetools.egg-info/SOURCES.txt' 2023-05-13T09:51:48,702 Copying sequana_pipetools.egg-info to build/bdist.linux-armv7l/wheel/sequana_pipetools-0.12.1-py3.7.egg-info 2023-05-13T09:51:48,730 running install_scripts 2023-05-13T09:51:48,772 creating build/bdist.linux-armv7l/wheel/sequana_pipetools-0.12.1.dist-info/WHEEL 2023-05-13T09:51:48,778 creating '/tmp/pip-wheel-il63h5i5/sequana_pipetools-0.12.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-13T09:51:48,783 adding 'sequana_pipetools/__init__.py' 2023-05-13T09:51:48,785 adding 'sequana_pipetools/errors.py' 2023-05-13T09:51:48,788 adding 'sequana_pipetools/info.py' 2023-05-13T09:51:48,791 adding 'sequana_pipetools/misc.py' 2023-05-13T09:51:48,797 adding 'sequana_pipetools/options.py' 2023-05-13T09:51:48,806 adding 'sequana_pipetools/sequana_manager.py' 2023-05-13T09:51:48,810 adding 'sequana_pipetools/slurm.py' 2023-05-13T09:51:48,814 adding 'sequana_pipetools/resources/__init__.py' 2023-05-13T09:51:48,817 adding 'sequana_pipetools/resources/ext.py' 2023-05-13T09:51:48,819 adding 'sequana_pipetools/resources/local.yaml' 2023-05-13T09:51:48,821 adding 'sequana_pipetools/resources/slurm.yaml' 2023-05-13T09:51:48,825 adding 'sequana_pipetools/scripts/__init__.py' 2023-05-13T09:51:48,828 adding 'sequana_pipetools/scripts/completion.py' 2023-05-13T09:51:48,831 adding 'sequana_pipetools/scripts/slurm.py' 2023-05-13T09:51:48,835 adding 'sequana_pipetools/snaketools/__init__.py' 2023-05-13T09:51:48,838 adding 'sequana_pipetools/snaketools/dot_parser.py' 2023-05-13T09:51:48,844 adding 'sequana_pipetools/snaketools/file_factory.py' 2023-05-13T09:51:48,849 adding 'sequana_pipetools/snaketools/module.py' 2023-05-13T09:51:48,853 adding 'sequana_pipetools/snaketools/module_finder.py' 2023-05-13T09:51:48,859 adding 'sequana_pipetools/snaketools/pipeline_manager.py' 2023-05-13T09:51:48,863 adding 'sequana_pipetools/snaketools/pipeline_utils.py' 2023-05-13T09:51:48,865 adding 'sequana_pipetools/snaketools/profile.py' 2023-05-13T09:51:48,869 adding 'sequana_pipetools/snaketools/sequana_config.py' 2023-05-13T09:51:48,878 adding 'sequana_pipetools-0.12.1.dist-info/METADATA' 2023-05-13T09:51:48,880 adding 'sequana_pipetools-0.12.1.dist-info/WHEEL' 2023-05-13T09:51:48,882 adding 'sequana_pipetools-0.12.1.dist-info/entry_points.txt' 2023-05-13T09:51:48,884 adding 'sequana_pipetools-0.12.1.dist-info/top_level.txt' 2023-05-13T09:51:48,886 adding 'sequana_pipetools-0.12.1.dist-info/RECORD' 2023-05-13T09:51:48,891 removing build/bdist.linux-armv7l/wheel 2023-05-13T09:51:49,063 Building wheel for sequana-pipetools (setup.py): finished with status 'done' 2023-05-13T09:51:49,071 Created wheel for sequana-pipetools: filename=sequana_pipetools-0.12.1-py3-none-any.whl size=56404 sha256=82d3aa64e369d3a2ab0c063223f3007d5d83ce2ca80914c9ef7875be5ee3766b 2023-05-13T09:51:49,074 Stored in directory: /tmp/pip-ephem-wheel-cache-b3ktv0uq/wheels/cb/73/30/2bb25af6476abd647d466b222d079d99d14777f405fb16c21b 2023-05-13T09:51:49,107 Successfully built sequana-pipetools 2023-05-13T09:51:49,117 Removed build tracker: '/tmp/pip-build-tracker-izc97i0t'