2023-05-14T08:24:10,747 Created temporary directory: /tmp/pip-build-tracker-hg_zxtvg 2023-05-14T08:24:10,750 Initialized build tracking at /tmp/pip-build-tracker-hg_zxtvg 2023-05-14T08:24:10,750 Created build tracker: /tmp/pip-build-tracker-hg_zxtvg 2023-05-14T08:24:10,750 Entered build tracker: /tmp/pip-build-tracker-hg_zxtvg 2023-05-14T08:24:10,751 Created temporary directory: /tmp/pip-wheel-tx491a6c 2023-05-14T08:24:10,760 Created temporary directory: /tmp/pip-ephem-wheel-cache-7a_p_1q3 2023-05-14T08:24:10,812 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-14T08:24:10,820 2 location(s) to search for versions of biom-format: 2023-05-14T08:24:10,820 * https://pypi.org/simple/biom-format/ 2023-05-14T08:24:10,820 * https://www.piwheels.org/simple/biom-format/ 2023-05-14T08:24:10,821 Fetching project page and analyzing links: https://pypi.org/simple/biom-format/ 2023-05-14T08:24:10,822 Getting page https://pypi.org/simple/biom-format/ 2023-05-14T08:24:10,826 Found index url https://pypi.org/simple/ 2023-05-14T08:24:10,933 Fetched page https://pypi.org/simple/biom-format/ as application/vnd.pypi.simple.v1+json 2023-05-14T08:24:10,954 Found link https://files.pythonhosted.org/packages/e8/a0/0b4947cd716f8923410be46d0473442e906e80fd605d1f900667224878a9/biom-format-1.2.0-dev.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.2.0-dev 2023-05-14T08:24:10,955 Found link https://files.pythonhosted.org/packages/5d/a6/50855b83db9932d78ff10721d90f79725729040db8117ce2c5a1e50c3a75/biom-format-1.3.0.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.3.0 2023-05-14T08:24:10,956 Found link https://files.pythonhosted.org/packages/98/3b/4e80a9a5c4a3c6764aa8c0c994973e7df71eee02fc6b8cc6e1d06a64ab7e/biom-format-1.3.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.3.1 2023-05-14T08:24:10,956 Found link https://files.pythonhosted.org/packages/ab/62/b44f747c549c2cb3408462905461ae8d0975163c927b4ac4452321368815/biom-format-2.0.0.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.0.0 2023-05-14T08:24:10,957 Found link https://files.pythonhosted.org/packages/26/14/46ce3a0c94b4e5f03473b029be7df19341c525c92d310443ca1bd935c4c1/biom-format-2.0.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.0.1 2023-05-14T08:24:10,958 Found link https://files.pythonhosted.org/packages/bc/8e/c937b6997062dfc70cd6fc6f53b70703dcec400e39af2d43542349f7ace6/biom-format-2.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1 2023-05-14T08:24:10,958 Found link https://files.pythonhosted.org/packages/40/45/a7a64146c75f00cf9889753d39a0371adf2982ee3f1eb31c28efbb5a3529/biom-format-2.1.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.1 2023-05-14T08:24:10,959 Found link https://files.pythonhosted.org/packages/d9/de/65d8089e4aab975658f80c4975015fb5c761fe4c37868cc317733f33d0cd/biom-format-2.1.2.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.2 2023-05-14T08:24:10,960 Found link https://files.pythonhosted.org/packages/9d/ed/1ff2ee2d16aa3edd66e8f07f11321eb9b9cd478307d87674c633ba9b081a/biom-format-2.1.3.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.3 2023-05-14T08:24:10,960 Found link https://files.pythonhosted.org/packages/2e/8e/f8575e51764697c485f7e81dfc31ff72d8b2c4b50e88c23094be65814451/biom-format-2.1.4.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.4 2023-05-14T08:24:10,961 Found link https://files.pythonhosted.org/packages/e8/74/9b7e50c29ba548cd53eb97fb9cc1f05a2cf53aa179a64f36e93282b84f79/biom-format-2.1.5.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.5 2023-05-14T08:24:10,962 Found link https://files.pythonhosted.org/packages/46/a6/fccc2f5db587d7d896b52054aa5a9f0f7fd8fb6ad23ab9a02934d4cb1739/biom-format-2.1.6.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.6 2023-05-14T08:24:10,963 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/c2/10/ed278d6263ad222b5327f127f07afaadff7dc7ae8482592b9c05500e976d/biom_format-2.1.6-cp27-cp27m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/biom-format/) 2023-05-14T08:24:10,963 Found link https://files.pythonhosted.org/packages/25/92/ca4688a006b784bcc1f118c4a53e9aadc78d78abf8ff58ee11d29ac950a4/biom-format-2.1.7.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.7 2023-05-14T08:24:10,964 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/d1/84/0521b9203bb525c2d6a06905be950f29ca98e60a12dca71dfd18bffe7d92/biom_format-2.1.7-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/biom-format/) 2023-05-14T08:24:10,964 Found link https://files.pythonhosted.org/packages/c1/c6/3b4284680b390a6c0a39de2fddddfe19a28d1bdceb5951713c483c147f44/biom-format-2.1.8-1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.8-1 2023-05-14T08:24:10,965 Found link https://files.pythonhosted.org/packages/4b/50/65e535736597ce91e82a8e3e83cf1e88735368b58f99585f600b854f0bc9/biom-format-2.1.9.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.9 2023-05-14T08:24:10,966 Found link https://files.pythonhosted.org/packages/2b/8f/ef865d43a06dd3d1b09808fbd129074e64127fa8db0b93b5e0cf1d1a50de/biom-format-2.1.10.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.10 2023-05-14T08:24:10,967 Found link https://files.pythonhosted.org/packages/fc/3f/7eb762b52f490b810b1686fd41cd6f3f7f33c0dab29c4273c96e9a1641a2/biom-format-2.1.12.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.12 2023-05-14T08:24:10,969 Found link https://files.pythonhosted.org/packages/90/57/0a326e17005b25e56f6e25b8b1e3eae299b7f6d53af06b11c4830d631612/biom-format-2.1.13.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.13 2023-05-14T08:24:10,970 Found link https://files.pythonhosted.org/packages/8e/2c/132267e58172821fc15fa3856f53ed09b607837fe06e2bb60b230005951d/biom-format-2.1.14.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.14 2023-05-14T08:24:10,972 Found link https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.15 2023-05-14T08:24:10,973 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/52/9b/f3d2fcc1d0141e86e08330c7516d750662f8a3df40c7f5ef8d633fc485b1/biom_format-2.1.15-cp310-cp310-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,973 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/69/1a/8346a46e7b68aa49a7303d8cf9a12c7c08ee1d0a2142f1066c906a99def0/biom_format-2.1.15-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,974 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/ed/d4/6e42221bbbfee00aa96692583cef753a3f0b455b26854fd7111740a81999/biom_format-2.1.15-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,974 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/0b/2d/18978cf47787f2435d2d288d58c76e891b466845f670ffc14cd5455aca94/biom_format-2.1.15-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,975 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/63/ad/148ed220742d9d8995805a86877867551733a01edaf8e95a214ad36e051e/biom_format-2.1.15-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,975 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/ae/b6/da4325213838fe4d078da9f73d913838959680217d2188b240818216113d/biom_format-2.1.15-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,976 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/2e/cf/4bc7592b3c48664c4c927547983814c4708c248ff3d753b0d60ac0ad7250/biom_format-2.1.15-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,977 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/7d/8a/6ea8c3bc9d61dcf46c6e7ccaf11ce07d46184a0b0e1ed31b8ec36db94e89/biom_format-2.1.15-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,977 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/ca/0d/64c1e729685aa1de049816f0972b9be78a9b8489a7b9ba1dc9ff6bc9f95e/biom_format-2.1.15-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,978 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/93/c5/5d6c2adce1ad1288c9d13a689971582fc556c5c3b7523c20b25dec4a8ae8/biom_format-2.1.15-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,978 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/74/bb/bdf0f58bcf7a6d287e94d94b3464263b62f04068f2109a4380efda6a025d/biom_format-2.1.15-cp38-cp38-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,979 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/14/fe/dc90a6ec894343130e40fca22c7c324fbd08d5f48559d2d7730cfa768a72/biom_format-2.1.15-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,979 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/9c/36/b2dcba3e20fe23f839e9641a9e5e600a342c422ab07bc54c6383a3980deb/biom_format-2.1.15-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,980 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/95/f4/65a3d3bdadff352d97e410173bcbf80ea5dfeefdf18588232d2029eac0d6/biom_format-2.1.15-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,980 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/0a/eb/5a836a2d9314e0a93db6c3cbb4f5a1019171ada3b8b0ff2e0c9bdbdcfc97/biom_format-2.1.15-cp39-cp39-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,981 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/4d/2a/9f1f3ea15f5894392ea77518f0982ebaac93b3c274c2762ea23defebf422/biom_format-2.1.15-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,981 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/c4/f0/53a3e6a04d281e67b3d2745b9a9163c6be3a11970cf5150d73037a6c3cca/biom_format-2.1.15-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,982 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/50/14/4bf1e8766a9e4df3c2945e0d70f960985c0886ebcd09fd7d95bebeba9ff1/biom_format-2.1.15-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:10,982 Fetching project page and analyzing links: https://www.piwheels.org/simple/biom-format/ 2023-05-14T08:24:10,983 Getting page https://www.piwheels.org/simple/biom-format/ 2023-05-14T08:24:10,985 Found index url https://www.piwheels.org/simple/ 2023-05-14T08:24:11,408 Fetched page https://www.piwheels.org/simple/biom-format/ as text/html 2023-05-14T08:24:11,481 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.15-cp39-cp39-linux_aarch64.whl#sha256=182eefc34079b8d60310c108e18935c19289cc129bffc92dd1185a480b423f29 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,481 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.15-cp37-cp37m-linux_aarch64.whl#sha256=edc49de1859a50a796da2d324fddda14cf3b884fdbb2ada9f3f18472e0e2ec02 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,482 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp39-cp39-linux_armv7l.whl#sha256=ca23d062853e5ba6f0c54ba8cb321444b60c337ff96c5d08f2f365fdf3e7afc0 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,482 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp39-cp39-linux_armv6l.whl#sha256=ca23d062853e5ba6f0c54ba8cb321444b60c337ff96c5d08f2f365fdf3e7afc0 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,483 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp37-cp37m-linux_armv7l.whl#sha256=45dd2e44b2b46efdafb7678246b670cff402736187481b12f037d7f0c4d8f8e1 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,483 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp37-cp37m-linux_armv6l.whl#sha256=45dd2e44b2b46efdafb7678246b670cff402736187481b12f037d7f0c4d8f8e1 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,484 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp39-cp39-linux_armv7l.whl#sha256=80b341578111894f67221800901df758240597ef524df0db82477061329f821a (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,484 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp39-cp39-linux_armv6l.whl#sha256=80b341578111894f67221800901df758240597ef524df0db82477061329f821a (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,485 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp37-cp37m-linux_armv7l.whl#sha256=497b24d7afb924a1d676e19148c410da9bcf85cd8edb8a94151b5e550426311b (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,486 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp37-cp37m-linux_armv6l.whl#sha256=497b24d7afb924a1d676e19148c410da9bcf85cd8edb8a94151b5e550426311b (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,486 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.12-cp39-cp39-linux_armv7l.whl#sha256=28c6a62b9565f15dad3e58c960d180ab30f76bbf4bc1dfb23b38d7fdbae87af5 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,487 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.12-cp39-cp39-linux_armv6l.whl#sha256=28c6a62b9565f15dad3e58c960d180ab30f76bbf4bc1dfb23b38d7fdbae87af5 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-14T08:24:11,487 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-1.2.0.dev0-py3-none-any.whl#sha256=1c6e81249da6f3e19dd7594733329820632b1b6b0355abe79af180116c3b8aba (from https://www.piwheels.org/simple/biom-format/) 2023-05-14T08:24:11,530 Skipping link: not a file: https://www.piwheels.org/simple/biom-format/ 2023-05-14T08:24:11,531 Skipping link: not a file: https://pypi.org/simple/biom-format/ 2023-05-14T08:24:11,567 Given no hashes to check 1 links for project 'biom-format': discarding no candidates 2023-05-14T08:24:11,595 Collecting biom-format==2.1.15 2023-05-14T08:24:11,600 Created temporary directory: /tmp/pip-unpack-1miyeygk 2023-05-14T08:24:11,697 Downloading biom-format-2.1.15.tar.gz (11.7 MB) 2023-05-14T08:24:19,924 Added biom-format==2.1.15 from https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz to build tracker '/tmp/pip-build-tracker-hg_zxtvg' 2023-05-14T08:24:19,935 Created temporary directory: /tmp/pip-build-env-c6f43lzx 2023-05-14T08:24:19,956 Installing build dependencies: started 2023-05-14T08:24:19,958 Running command pip subprocess to install build dependencies 2023-05-14T08:24:22,850 Using pip 23.1.2 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-05-14T08:24:23,586 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-14T08:24:27,514 Collecting setuptools 2023-05-14T08:24:27,771 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.7.2-py3-none-any.whl (1.1 MB) 2023-05-14T08:24:28,426 Collecting wheel 2023-05-14T08:24:28,464 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-05-14T08:24:30,392 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/50/e1/9b0c184f04b8cf5f3c941ffa56fbcbe936888bdac9aa7ba6bae405ac752b/numpy-1.22.0.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,404 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/0a/c8/a62767a6b374a0dfb02d2a0456e5f56a372cdd1689dbc6ffb6bf1ddedbc0/numpy-1.22.1.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,416 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e9/6c/c0a8130fe198f27bab92f1b28631e0cc2572295f6b7a31e87efe7448aa1c/numpy-1.22.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,427 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/64/4a/b008d1f8a7b9f5206ecf70a53f84e654707e7616a771d84c05151a4713e9/numpy-1.22.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,440 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/f6/d8/ab692a75f584d13c6542c3994f75def5bce52ded9399f52e230fe402819d/numpy-1.22.4.zip (from 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https://files.pythonhosted.org/packages/03/c6/14a17e10813b8db20d1e800ff9a3a898e65d25f2b0e9d6a94616f1e3362c/numpy-1.23.0.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,503 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/13/b1/0c22aa7ca1deda4915cdec9562f839546bb252eecf6ad596eaec0592bd35/numpy-1.23.1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,518 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/f4/66/17b8e95770478436bf968353c89683ce6f9e14d92e0d4fb3111c09ba18d2/numpy-1.23.2.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,533 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/0a/88/f4f0c7a982efdf7bf22f283acf6009b29a9cc5835b684a49f8d3a4adb22f/numpy-1.23.3.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,548 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/64/8e/9929b64e146d240507edaac2185cd5516f00b133be5b39250d253be25a64/numpy-1.23.4.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,563 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/42/38/775b43da55fa7473015eddc9a819571517d9a271a9f8134f68fb9be2f212/numpy-1.23.5.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,578 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/8a/b0/bb59e52e4eb90a42fbff1a90d57c45265fa3133c533e67842757068fc731/numpy-1.24.0rc1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,594 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/da/d9/f27cf8e76b9bb015802cb347f208a32383299fd5e30965735a82a92902ae/numpy-1.24.0rc2.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,609 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/5f/c7/5ca7c100dcc85b5ef1b176bdf87be5e4392c2c3018e13cc7cdef828c6a09/numpy-1.24.0.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,624 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ce/b8/c170db50ec49d5845bd771bc5549fe734ee73083c5c52791915f95d8e2bc/numpy-1.24.1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,639 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e4/a9/6704bb5e1d1d778d3a6ee1278a8d8134f0db160e09d52863a24edb58eab5/numpy-1.24.2.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:30,654 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/2c/d4/590ae7df5044465cc9fa2db152ae12468694d62d952b1528ecff328ef7fc/numpy-1.24.3.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-05-14T08:24:31,265 Collecting numpy 2023-05-14T08:24:33,595 Using cached https://www.piwheels.org/simple/numpy/numpy-1.21.4-cp37-cp37m-linux_armv7l.whl (12.3 MB) 2023-05-14T08:24:37,854 Collecting cython 2023-05-14T08:24:38,385 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.34-cp37-cp37m-linux_armv7l.whl (2.3 MB) 2023-05-14T08:24:43,056 Installing collected packages: wheel, setuptools, numpy, cython 2023-05-14T08:24:43,515 Creating /tmp/pip-build-env-c6f43lzx/overlay/bin 2023-05-14T08:24:43,519 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/wheel to 755 2023-05-14T08:25:04,369 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/f2py to 755 2023-05-14T08:25:04,374 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/f2py3 to 755 2023-05-14T08:25:04,379 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/f2py3.7 to 755 2023-05-14T08:25:09,947 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/cygdb to 755 2023-05-14T08:25:09,952 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/cython to 755 2023-05-14T08:25:09,957 changing mode of /tmp/pip-build-env-c6f43lzx/overlay/bin/cythonize to 755 2023-05-14T08:25:10,009 Successfully installed cython-0.29.34 numpy-1.21.4 setuptools-67.7.2 wheel-0.40.0 2023-05-14T08:25:10,622 Installing build dependencies: finished with status 'done' 2023-05-14T08:25:10,647 Getting requirements to build wheel: started 2023-05-14T08:25:10,649 Running command Getting requirements to build wheel 2023-05-14T08:25:22,463 Compiling biom/_filter.pyx because it changed. 2023-05-14T08:25:22,465 Compiling biom/_transform.pyx because it changed. 2023-05-14T08:25:22,465 Compiling biom/_subsample.pyx because it changed. 2023-05-14T08:25:22,466 [1/3] Cythonizing biom/_filter.pyx 2023-05-14T08:25:22,466 [2/3] Cythonizing biom/_subsample.pyx 2023-05-14T08:25:22,466 [3/3] Cythonizing biom/_transform.pyx 2023-05-14T08:25:22,711 running egg_info 2023-05-14T08:25:22,725 writing biom_format.egg-info/PKG-INFO 2023-05-14T08:25:22,729 writing dependency_links to biom_format.egg-info/dependency_links.txt 2023-05-14T08:25:22,734 writing entry points to biom_format.egg-info/entry_points.txt 2023-05-14T08:25:22,737 writing requirements to biom_format.egg-info/requires.txt 2023-05-14T08:25:22,739 writing top-level names to biom_format.egg-info/top_level.txt 2023-05-14T08:25:22,822 reading manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:22,878 reading manifest template 'MANIFEST.in' 2023-05-14T08:25:22,905 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-tx491a6c/biom-format_62172ae39cfa4e34a1f4d9706203fa96/biom/_filter.pyx 2023-05-14T08:25:22,906 tree = Parsing.p_module(s, pxd, full_module_name) 2023-05-14T08:25:22,907 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-tx491a6c/biom-format_62172ae39cfa4e34a1f4d9706203fa96/biom/_subsample.pyx 2023-05-14T08:25:22,907 tree = Parsing.p_module(s, pxd, full_module_name) 2023-05-14T08:25:22,907 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-tx491a6c/biom-format_62172ae39cfa4e34a1f4d9706203fa96/biom/_transform.pyx 2023-05-14T08:25:22,908 tree = Parsing.p_module(s, pxd, full_module_name) 2023-05-14T08:25:22,908 warning: no directories found matching 'support_files' 2023-05-14T08:25:22,924 warning: no directories found matching 'tests/test_data' 2023-05-14T08:25:22,927 no previously-included directories found matching 'docs/_build' 2023-05-14T08:25:22,931 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-14T08:25:22,934 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-05-14T08:25:22,937 warning: no previously-included files matching '.git' found anywhere in distribution 2023-05-14T08:25:22,944 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-05-14T08:25:22,947 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-05-14T08:25:22,948 adding license file 'COPYING.txt' 2023-05-14T08:25:22,980 writing manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:23,418 Getting requirements to build wheel: finished with status 'done' 2023-05-14T08:25:23,439 Created temporary directory: /tmp/pip-modern-metadata-15nas9v3 2023-05-14T08:25:23,445 Preparing metadata (pyproject.toml): started 2023-05-14T08:25:23,447 Running command Preparing metadata (pyproject.toml) 2023-05-14T08:25:27,646 running dist_info 2023-05-14T08:25:27,689 creating /tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info 2023-05-14T08:25:27,703 writing /tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/PKG-INFO 2023-05-14T08:25:27,707 writing dependency_links to /tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/dependency_links.txt 2023-05-14T08:25:27,711 writing entry points to /tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/entry_points.txt 2023-05-14T08:25:27,714 writing requirements to /tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/requires.txt 2023-05-14T08:25:27,716 writing top-level names to /tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/top_level.txt 2023-05-14T08:25:27,719 writing manifest file '/tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:27,788 reading manifest file '/tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:27,793 reading manifest template 'MANIFEST.in' 2023-05-14T08:25:27,815 warning: no directories found matching 'support_files' 2023-05-14T08:25:27,827 warning: no directories found matching 'tests/test_data' 2023-05-14T08:25:27,829 no previously-included directories found matching 'docs/_build' 2023-05-14T08:25:27,831 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-14T08:25:27,834 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-05-14T08:25:27,836 warning: no previously-included files matching '.git' found anywhere in distribution 2023-05-14T08:25:27,841 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-05-14T08:25:27,843 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-05-14T08:25:27,844 adding license file 'COPYING.txt' 2023-05-14T08:25:27,867 writing manifest file '/tmp/pip-modern-metadata-15nas9v3/biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:27,870 creating '/tmp/pip-modern-metadata-15nas9v3/biom_format-2.1.15.dist-info' 2023-05-14T08:25:28,334 Preparing metadata (pyproject.toml): finished with status 'done' 2023-05-14T08:25:28,348 Source in /tmp/pip-wheel-tx491a6c/biom-format_62172ae39cfa4e34a1f4d9706203fa96 has version 2.1.15, which satisfies requirement biom-format==2.1.15 from https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz 2023-05-14T08:25:28,350 Removed biom-format==2.1.15 from https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz from build tracker '/tmp/pip-build-tracker-hg_zxtvg' 2023-05-14T08:25:28,364 Created temporary directory: /tmp/pip-unpack-tputi5oy 2023-05-14T08:25:28,366 Building wheels for collected packages: biom-format 2023-05-14T08:25:28,375 Created temporary directory: /tmp/pip-wheel-lwtbv76m 2023-05-14T08:25:28,375 Destination directory: /tmp/pip-wheel-lwtbv76m 2023-05-14T08:25:28,380 Building wheel for biom-format (pyproject.toml): started 2023-05-14T08:25:28,384 Running command Building wheel for biom-format (pyproject.toml) 2023-05-14T08:25:32,448 running bdist_wheel 2023-05-14T08:25:32,504 running build 2023-05-14T08:25:32,505 running build_py 2023-05-14T08:25:32,526 creating build 2023-05-14T08:25:32,527 creating build/lib.linux-armv7l-cpython-37 2023-05-14T08:25:32,528 creating build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,531 copying biom/exception.py -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,535 copying biom/table.py -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,550 copying biom/util.py -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,555 copying biom/__init__.py -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,559 copying biom/err.py -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,564 copying biom/parse.py -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:32,570 creating build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,572 copying biom/tests/test_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,586 copying biom/tests/test_util.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,592 copying biom/tests/test_err.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,596 copying biom/tests/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,599 copying biom/tests/test_parse.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,606 copying biom/tests/long_lines.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-05-14T08:25:32,613 creating build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,615 copying biom/cli/table_summarizer.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,620 copying biom/cli/table_ids.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,624 copying biom/cli/util.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,628 copying biom/cli/installation_informer.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,631 copying biom/cli/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,635 copying biom/cli/table_normalizer.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,639 copying biom/cli/metadata_adder.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,644 copying biom/cli/table_head.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,648 copying biom/cli/table_subsetter.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,652 copying biom/cli/metadata_exporter.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,656 copying biom/cli/table_converter.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,661 copying biom/cli/uc_processor.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,665 copying biom/cli/table_validator.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-05-14T08:25:32,672 creating build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,674 copying biom/tests/test_cli/test_uc_processor.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,678 copying biom/tests/test_cli/test_validate_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,683 copying biom/tests/test_cli/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,687 copying biom/tests/test_cli/test_subset_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,691 copying biom/tests/test_cli/test_show_install_info.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,694 copying biom/tests/test_cli/test_table_normalizer.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,698 copying biom/tests/test_cli/test_summarize_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,702 copying biom/tests/test_cli/test_add_metadata.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,707 copying biom/tests/test_cli/test_table_converter.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-05-14T08:25:32,713 creating build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:32,714 copying biom/tests/test_data/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:32,717 running egg_info 2023-05-14T08:25:32,763 writing biom_format.egg-info/PKG-INFO 2023-05-14T08:25:32,766 writing dependency_links to biom_format.egg-info/dependency_links.txt 2023-05-14T08:25:32,769 writing entry points to biom_format.egg-info/entry_points.txt 2023-05-14T08:25:32,772 writing requirements to biom_format.egg-info/requires.txt 2023-05-14T08:25:32,774 writing top-level names to biom_format.egg-info/top_level.txt 2023-05-14T08:25:32,806 reading manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:32,864 reading manifest template 'MANIFEST.in' 2023-05-14T08:25:32,886 warning: no directories found matching 'support_files' 2023-05-14T08:25:32,898 warning: no directories found matching 'tests/test_data' 2023-05-14T08:25:32,901 no previously-included directories found matching 'docs/_build' 2023-05-14T08:25:32,904 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-14T08:25:32,908 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-05-14T08:25:32,911 warning: no previously-included files matching '.git' found anywhere in distribution 2023-05-14T08:25:32,918 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-05-14T08:25:32,921 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-05-14T08:25:32,922 adding license file 'COPYING.txt' 2023-05-14T08:25:32,954 writing manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-14T08:25:33,009 copying biom/_filter.pyx -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:33,014 copying biom/_subsample.pyx -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:33,019 copying biom/_transform.pyx -> build/lib.linux-armv7l-cpython-37/biom 2023-05-14T08:25:33,023 creating build/lib.linux-armv7l-cpython-37/biom/assets 2023-05-14T08:25:33,024 copying biom/assets/exercise_api.py -> build/lib.linux-armv7l-cpython-37/biom/assets 2023-05-14T08:25:33,029 copying biom/assets/exercise_cli.sh -> build/lib.linux-armv7l-cpython-37/biom/assets 2023-05-14T08:25:33,034 creating build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:33,036 copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:33,052 copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:33,090 copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:33,200 copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:33,237 copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,284 copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,469 copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,477 copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,501 copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,530 copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,560 copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,683 copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,814 copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,821 copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,843 copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,852 copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,873 copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,892 copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,919 copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,925 copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,948 copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,953 copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,973 copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:34,980 copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,002 copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,009 copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,032 copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,058 copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,095 copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,239 copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,368 copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,373 copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,382 copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,387 copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,396 copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,414 copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,463 copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,467 copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,485 copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,490 copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,499 copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,505 copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,515 copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,521 copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,532 copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,540 copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,553 copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,561 copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,571 copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,579 copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,604 copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,613 copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,639 copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,660 copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,697 copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,703 copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,714 copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,719 copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,730 copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,738 copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,750 copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,754 copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,760 copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,764 copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,772 copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,776 copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,785 copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,792 copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,801 copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,805 copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,811 copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,814 copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,821 copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,827 copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,848 copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,854 copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,874 copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,882 copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,906 copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,910 copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,919 copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,923 copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,931 copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,936 copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,945 copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,948 copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,954 copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,958 copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,964 copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,969 copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,977 copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,982 copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,989 copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:35,993 copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:36,000 copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:36,004 copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-05-14T08:25:36,010 creating build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-05-14T08:25:36,011 copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-05-14T08:25:36,016 copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-05-14T08:25:36,020 copying biom/tests/test_cli/test_data/test.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-05-14T08:25:36,026 copying biom/tests/test_cli/test_data/test.json -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-05-14T08:25:36,030 copying biom/tests/test_data/bad_table.txt -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,034 copying biom/tests/test_data/bad_table.txt.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,038 copying biom/tests/test_data/empty.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,043 copying biom/tests/test_data/no-contents.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,046 copying biom/tests/test_data/test.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,054 copying biom/tests/test_data/test.json -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,058 copying biom/tests/test_data/test.json.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,061 copying biom/tests/test_data/test_grp_metadata.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-05-14T08:25:36,077 running build_ext 2023-05-14T08:25:36,087 building 'biom._filter' extension 2023-05-14T08:25:36,089 creating build/temp.linux-armv7l-cpython-37 2023-05-14T08:25:36,089 creating build/temp.linux-armv7l-cpython-37/biom 2023-05-14T08:25:36,091 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include -I/tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_filter.c -o build/temp.linux-armv7l-cpython-37/biom/_filter.o 2023-05-14T08:25:36,822 In file included from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-05-14T08:25:36,822 from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-05-14T08:25:36,823 from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-05-14T08:25:36,823 from biom/_filter.c:768: 2023-05-14T08:25:36,823 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-05-14T08:25:36,824 #warning "Using deprecated NumPy API, disable it with " \ 2023-05-14T08:25:36,824 ^~~~~~~ 2023-05-14T08:25:54,915 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/biom/_filter.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/biom/_filter.cpython-37m-arm-linux-gnueabihf.so 2023-05-14T08:26:09,454 building 'biom._transform' extension 2023-05-14T08:26:09,456 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include -I/tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_transform.c -o build/temp.linux-armv7l-cpython-37/biom/_transform.o 2023-05-14T08:26:10,088 In file included from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-05-14T08:26:10,088 from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-05-14T08:26:10,089 from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-05-14T08:26:10,089 from biom/_transform.c:768: 2023-05-14T08:26:10,090 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-05-14T08:26:10,090 #warning "Using deprecated NumPy API, disable it with " \ 2023-05-14T08:26:10,090 ^~~~~~~ 2023-05-14T08:26:16,102 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/biom/_transform.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/biom/_transform.cpython-37m-arm-linux-gnueabihf.so 2023-05-14T08:26:20,715 building 'biom._subsample' extension 2023-05-14T08:26:20,717 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include -I/tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_subsample.c -o build/temp.linux-armv7l-cpython-37/biom/_subsample.o 2023-05-14T08:26:21,364 In file included from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-05-14T08:26:21,365 from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-05-14T08:26:21,365 from /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-05-14T08:26:21,365 from biom/_subsample.c:768: 2023-05-14T08:26:21,366 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-05-14T08:26:21,366 #warning "Using deprecated NumPy API, disable it with " \ 2023-05-14T08:26:21,367 ^~~~~~~ 2023-05-14T08:26:34,296 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/biom/_subsample.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so 2023-05-14T08:26:44,588 installing to build/bdist.linux-armv7l/wheel 2023-05-14T08:26:44,589 running install 2023-05-14T08:26:44,650 running install_lib 2023-05-14T08:26:44,670 creating build/bdist.linux-armv7l 2023-05-14T08:26:44,671 creating build/bdist.linux-armv7l/wheel 2023-05-14T08:26:44,674 creating build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:44,676 copying build/lib.linux-armv7l-cpython-37/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:44,688 copying build/lib.linux-armv7l-cpython-37/biom/_filter.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:44,700 copying build/lib.linux-armv7l-cpython-37/biom/_transform.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:44,704 copying build/lib.linux-armv7l-cpython-37/biom/exception.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:44,709 creating build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:44,710 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_table.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:44,725 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_util.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:44,730 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_err.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:44,736 creating build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,739 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_uc_processor.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,743 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_validate_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,749 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,753 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_subset_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,758 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_show_install_info.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,764 creating build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-14T08:26:44,766 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/test.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-14T08:26:44,774 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-14T08:26:44,778 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-14T08:26:44,783 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/test.json -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-14T08:26:44,787 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_table_normalizer.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,791 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_summarize_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,796 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_add_metadata.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,802 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_table_converter.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-14T08:26:44,808 copying build/lib.linux-armv7l-cpython-37/biom/tests/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:44,812 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_parse.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:44,825 creating build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,827 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,834 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,838 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,842 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,846 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,875 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,881 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:44,999 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,021 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,025 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,032 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,036 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,045 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,053 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,070 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,078 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,081 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,090 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,112 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,116 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,122 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,125 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,129 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,150 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,154 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,160 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,164 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,168 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,184 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,213 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,345 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,376 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,382 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,404 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,410 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,413 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,430 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,433 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,440 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,461 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,468 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,582 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,588 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,591 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,599 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,625 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,671 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,678 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,684 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,691 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,694 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,700 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,721 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,856 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,864 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,869 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,907 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,911 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,934 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,943 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,972 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:45,992 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:46,127 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:46,133 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,251 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,257 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,263 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,286 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,294 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,303 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,306 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,312 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,318 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,324 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,345 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,348 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,352 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,360 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,366 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,369 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,373 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,394 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,398 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,404 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,412 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,417 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,425 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,434 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,439 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,448 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,453 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,460 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,479 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,485 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,503 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,536 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-14T08:26:47,744 creating build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,746 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/bad_table.txt -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,750 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,756 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,759 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/empty.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,764 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test_grp_metadata.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,772 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test.json.gz -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,776 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/bad_table.txt.gz -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,780 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test.json -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,784 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/no-contents.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-14T08:26:47,788 copying build/lib.linux-armv7l-cpython-37/biom/tests/long_lines.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-14T08:26:47,793 copying build/lib.linux-armv7l-cpython-37/biom/_filter.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,799 copying build/lib.linux-armv7l-cpython-37/biom/table.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,813 copying build/lib.linux-armv7l-cpython-37/biom/_transform.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,823 copying build/lib.linux-armv7l-cpython-37/biom/util.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,830 creating build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,832 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_summarizer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,837 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_ids.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,841 copying build/lib.linux-armv7l-cpython-37/biom/cli/util.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,846 copying build/lib.linux-armv7l-cpython-37/biom/cli/installation_informer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,850 copying build/lib.linux-armv7l-cpython-37/biom/cli/__init__.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,855 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_normalizer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,859 copying build/lib.linux-armv7l-cpython-37/biom/cli/metadata_adder.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,864 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_head.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,868 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_subsetter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,873 copying build/lib.linux-armv7l-cpython-37/biom/cli/metadata_exporter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,878 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_converter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,883 copying build/lib.linux-armv7l-cpython-37/biom/cli/uc_processor.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,887 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_validator.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-14T08:26:47,893 copying build/lib.linux-armv7l-cpython-37/biom/__init__.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,897 copying build/lib.linux-armv7l-cpython-37/biom/_subsample.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,901 copying build/lib.linux-armv7l-cpython-37/biom/err.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,907 copying build/lib.linux-armv7l-cpython-37/biom/parse.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-14T08:26:47,913 creating build/bdist.linux-armv7l/wheel/biom/assets 2023-05-14T08:26:47,916 copying build/lib.linux-armv7l-cpython-37/biom/assets/exercise_cli.sh -> build/bdist.linux-armv7l/wheel/biom/assets 2023-05-14T08:26:47,921 copying build/lib.linux-armv7l-cpython-37/biom/assets/exercise_api.py -> build/bdist.linux-armv7l/wheel/biom/assets 2023-05-14T08:26:47,925 running install_egg_info 2023-05-14T08:26:47,956 Copying biom_format.egg-info to build/bdist.linux-armv7l/wheel/biom_format-2.1.15-py3.7.egg-info 2023-05-14T08:26:47,983 running install_scripts 2023-05-14T08:26:48,088 creating build/bdist.linux-armv7l/wheel/biom_format-2.1.15.dist-info/WHEEL 2023-05-14T08:26:48,095 creating '/tmp/pip-wheel-lwtbv76m/.tmp-6obwmp9v/biom_format-2.1.15-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-14T08:26:48,102 adding 'biom/__init__.py' 2023-05-14T08:26:48,176 adding 'biom/_filter.cpython-37m-arm-linux-gnueabihf.so' 2023-05-14T08:26:48,183 adding 'biom/_filter.pyx' 2023-05-14T08:26:48,239 adding 'biom/_subsample.cpython-37m-arm-linux-gnueabihf.so' 2023-05-14T08:26:48,245 adding 'biom/_subsample.pyx' 2023-05-14T08:26:48,286 adding 'biom/_transform.cpython-37m-arm-linux-gnueabihf.so' 2023-05-14T08:26:48,291 adding 'biom/_transform.pyx' 2023-05-14T08:26:48,296 adding 'biom/err.py' 2023-05-14T08:26:48,299 adding 'biom/exception.py' 2023-05-14T08:26:48,306 adding 'biom/parse.py' 2023-05-14T08:26:48,361 adding 'biom/table.py' 2023-05-14T08:26:48,370 adding 'biom/util.py' 2023-05-14T08:26:48,375 adding 'biom/assets/exercise_api.py' 2023-05-14T08:26:48,378 adding 'biom/assets/exercise_cli.sh' 2023-05-14T08:26:48,382 adding 'biom/cli/__init__.py' 2023-05-14T08:26:48,385 adding 'biom/cli/installation_informer.py' 2023-05-14T08:26:48,388 adding 'biom/cli/metadata_adder.py' 2023-05-14T08:26:48,391 adding 'biom/cli/metadata_exporter.py' 2023-05-14T08:26:48,395 adding 'biom/cli/table_converter.py' 2023-05-14T08:26:48,398 adding 'biom/cli/table_head.py' 2023-05-14T08:26:48,401 adding 'biom/cli/table_ids.py' 2023-05-14T08:26:48,403 adding 'biom/cli/table_normalizer.py' 2023-05-14T08:26:48,407 adding 'biom/cli/table_subsetter.py' 2023-05-14T08:26:48,410 adding 'biom/cli/table_summarizer.py' 2023-05-14T08:26:48,416 adding 'biom/cli/table_validator.py' 2023-05-14T08:26:48,419 adding 'biom/cli/uc_processor.py' 2023-05-14T08:26:48,422 adding 'biom/cli/util.py' 2023-05-14T08:26:48,426 adding 'biom/tests/__init__.py' 2023-05-14T08:26:48,429 adding 'biom/tests/long_lines.py' 2023-05-14T08:26:48,433 adding 'biom/tests/test_err.py' 2023-05-14T08:26:48,443 adding 'biom/tests/test_parse.py' 2023-05-14T08:26:48,480 adding 'biom/tests/test_table.py' 2023-05-14T08:26:48,488 adding 'biom/tests/test_util.py' 2023-05-14T08:26:48,518 adding 'biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz' 2023-05-14T08:26:48,779 adding 'biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:48,994 adding 'biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz' 2023-05-14T08:26:49,343 adding 'biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:50,715 adding 'biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz' 2023-05-14T08:26:52,033 adding 'biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:52,140 adding 'biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz' 2023-05-14T08:26:52,283 adding 'biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:52,363 adding 'biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz' 2023-05-14T08:26:52,551 adding 'biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:53,184 adding 'biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz' 2023-05-14T08:26:53,865 adding 'biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:53,908 adding 'biom/tests/bench_tables/10000x100x0.001_bench.biom.gz' 2023-05-14T08:26:54,031 adding 'biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:54,049 adding 'biom/tests/bench_tables/10000x100x0.010_bench.biom.gz' 2023-05-14T08:26:54,178 adding 'biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:54,230 adding 'biom/tests/bench_tables/10000x100x0.100_bench.biom.gz' 2023-05-14T08:26:54,392 adding 'biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:54,405 adding 'biom/tests/bench_tables/10000x10x0.001_bench.biom.gz' 2023-05-14T08:26:54,526 adding 'biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:54,538 adding 'biom/tests/bench_tables/10000x10x0.010_bench.biom.gz' 2023-05-14T08:26:54,660 adding 'biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:54,676 adding 'biom/tests/bench_tables/10000x10x0.100_bench.biom.gz' 2023-05-14T08:26:54,801 adding 'biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:54,820 adding 'biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz' 2023-05-14T08:26:54,958 adding 'biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:55,059 adding 'biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz' 2023-05-14T08:26:55,258 adding 'biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:56,023 adding 'biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz' 2023-05-14T08:26:56,891 adding 'biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:56,945 adding 'biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz' 2023-05-14T08:26:56,969 adding 'biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:56,977 adding 'biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz' 2023-05-14T08:26:57,003 adding 'biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,025 adding 'biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz' 2023-05-14T08:26:57,059 adding 'biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,065 adding 'biom/tests/bench_tables/1000x100x0.001_bench.biom.gz' 2023-05-14T08:26:57,080 adding 'biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:57,085 adding 'biom/tests/bench_tables/1000x100x0.010_bench.biom.gz' 2023-05-14T08:26:57,100 adding 'biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,110 adding 'biom/tests/bench_tables/1000x100x0.100_bench.biom.gz' 2023-05-14T08:26:57,128 adding 'biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,133 adding 'biom/tests/bench_tables/1000x10x0.001_bench.biom.gz' 2023-05-14T08:26:57,147 adding 'biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:57,152 adding 'biom/tests/bench_tables/1000x10x0.010_bench.biom.gz' 2023-05-14T08:26:57,166 adding 'biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,171 adding 'biom/tests/bench_tables/1000x10x0.100_bench.biom.gz' 2023-05-14T08:26:57,186 adding 'biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,193 adding 'biom/tests/bench_tables/100x10000x0.001_bench.biom.gz' 2023-05-14T08:26:57,315 adding 'biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:57,333 adding 'biom/tests/bench_tables/100x10000x0.010_bench.biom.gz' 2023-05-14T08:26:57,461 adding 'biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,543 adding 'biom/tests/bench_tables/100x10000x0.100_bench.biom.gz' 2023-05-14T08:26:57,732 adding 'biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,746 adding 'biom/tests/bench_tables/100x1000x0.001_bench.biom.gz' 2023-05-14T08:26:57,760 adding 'biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:57,765 adding 'biom/tests/bench_tables/100x1000x0.010_bench.biom.gz' 2023-05-14T08:26:57,780 adding 'biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,789 adding 'biom/tests/bench_tables/100x1000x0.100_bench.biom.gz' 2023-05-14T08:26:57,809 adding 'biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,813 adding 'biom/tests/bench_tables/100x100x0.001_bench.biom.gz' 2023-05-14T08:26:57,822 adding 'biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:57,826 adding 'biom/tests/bench_tables/100x100x0.010_bench.biom.gz' 2023-05-14T08:26:57,832 adding 'biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,836 adding 'biom/tests/bench_tables/100x100x0.100_bench.biom.gz' 2023-05-14T08:26:57,842 adding 'biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,846 adding 'biom/tests/bench_tables/100x10x0.001_bench.biom.gz' 2023-05-14T08:26:57,852 adding 'biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:57,855 adding 'biom/tests/bench_tables/100x10x0.010_bench.biom.gz' 2023-05-14T08:26:57,861 adding 'biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:57,864 adding 'biom/tests/bench_tables/100x10x0.100_bench.biom.gz' 2023-05-14T08:26:57,870 adding 'biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:57,876 adding 'biom/tests/bench_tables/10x10000x0.001_bench.biom.gz' 2023-05-14T08:26:57,996 adding 'biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:58,008 adding 'biom/tests/bench_tables/10x10000x0.010_bench.biom.gz' 2023-05-14T08:26:58,128 adding 'biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:58,145 adding 'biom/tests/bench_tables/10x10000x0.100_bench.biom.gz' 2023-05-14T08:26:58,271 adding 'biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:58,281 adding 'biom/tests/bench_tables/10x1000x0.001_bench.biom.gz' 2023-05-14T08:26:58,294 adding 'biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:58,299 adding 'biom/tests/bench_tables/10x1000x0.010_bench.biom.gz' 2023-05-14T08:26:58,312 adding 'biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:58,318 adding 'biom/tests/bench_tables/10x1000x0.100_bench.biom.gz' 2023-05-14T08:26:58,331 adding 'biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:58,336 adding 'biom/tests/bench_tables/10x100x0.001_bench.biom.gz' 2023-05-14T08:26:58,341 adding 'biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:58,345 adding 'biom/tests/bench_tables/10x100x0.010_bench.biom.gz' 2023-05-14T08:26:58,351 adding 'biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:58,354 adding 'biom/tests/bench_tables/10x100x0.100_bench.biom.gz' 2023-05-14T08:26:58,360 adding 'biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:58,364 adding 'biom/tests/bench_tables/10x10x0.001_bench.biom.gz' 2023-05-14T08:26:58,369 adding 'biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz' 2023-05-14T08:26:58,373 adding 'biom/tests/bench_tables/10x10x0.010_bench.biom.gz' 2023-05-14T08:26:58,378 adding 'biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz' 2023-05-14T08:26:58,382 adding 'biom/tests/bench_tables/10x10x0.100_bench.biom.gz' 2023-05-14T08:26:58,388 adding 'biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz' 2023-05-14T08:26:58,392 adding 'biom/tests/test_cli/__init__.py' 2023-05-14T08:26:58,396 adding 'biom/tests/test_cli/test_add_metadata.py' 2023-05-14T08:26:58,399 adding 'biom/tests/test_cli/test_show_install_info.py' 2023-05-14T08:26:58,403 adding 'biom/tests/test_cli/test_subset_table.py' 2023-05-14T08:26:58,406 adding 'biom/tests/test_cli/test_summarize_table.py' 2023-05-14T08:26:58,411 adding 'biom/tests/test_cli/test_table_converter.py' 2023-05-14T08:26:58,414 adding 'biom/tests/test_cli/test_table_normalizer.py' 2023-05-14T08:26:58,417 adding 'biom/tests/test_cli/test_uc_processor.py' 2023-05-14T08:26:58,423 adding 'biom/tests/test_cli/test_validate_table.py' 2023-05-14T08:26:58,428 adding 'biom/tests/test_cli/test_data/json_obs_collapsed.biom' 2023-05-14T08:26:58,431 adding 'biom/tests/test_cli/test_data/json_sample_collapsed.biom' 2023-05-14T08:26:58,437 adding 'biom/tests/test_cli/test_data/test.biom' 2023-05-14T08:26:58,440 adding 'biom/tests/test_cli/test_data/test.json' 2023-05-14T08:26:58,444 adding 'biom/tests/test_data/__init__.py' 2023-05-14T08:26:58,446 adding 'biom/tests/test_data/bad_table.txt' 2023-05-14T08:26:58,449 adding 'biom/tests/test_data/bad_table.txt.gz' 2023-05-14T08:26:58,453 adding 'biom/tests/test_data/empty.biom' 2023-05-14T08:26:58,456 adding 'biom/tests/test_data/no-contents.biom' 2023-05-14T08:26:58,462 adding 'biom/tests/test_data/test.biom' 2023-05-14T08:26:58,466 adding 'biom/tests/test_data/test.json' 2023-05-14T08:26:58,468 adding 'biom/tests/test_data/test.json.gz' 2023-05-14T08:26:58,473 adding 'biom/tests/test_data/test_grp_metadata.biom' 2023-05-14T08:26:58,479 adding 'biom_format-2.1.15.dist-info/COPYING.txt' 2023-05-14T08:26:58,481 adding 'biom_format-2.1.15.dist-info/METADATA' 2023-05-14T08:26:58,483 adding 'biom_format-2.1.15.dist-info/WHEEL' 2023-05-14T08:26:58,485 adding 'biom_format-2.1.15.dist-info/entry_points.txt' 2023-05-14T08:26:58,487 adding 'biom_format-2.1.15.dist-info/top_level.txt' 2023-05-14T08:26:58,494 adding 'biom_format-2.1.15.dist-info/RECORD' 2023-05-14T08:26:58,801 removing build/bdist.linux-armv7l/wheel 2023-05-14T08:26:58,918 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'biom.assets' is absent from the `packages` configuration. 2023-05-14T08:26:58,919 !! 2023-05-14T08:26:58,920 ******************************************************************************** 2023-05-14T08:26:58,920 ############################ 2023-05-14T08:26:58,920 # Package would be ignored # 2023-05-14T08:26:58,921 ############################ 2023-05-14T08:26:58,921 Python recognizes 'biom.assets' as an importable package[^1], 2023-05-14T08:26:58,921 but it is absent from setuptools' `packages` configuration. 2023-05-14T08:26:58,922 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-14T08:26:58,922 package, please make sure that 'biom.assets' is explicitly added 2023-05-14T08:26:58,923 to the `packages` configuration field. 2023-05-14T08:26:58,923 Alternatively, you can also rely on setuptools' discovery methods 2023-05-14T08:26:58,924 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-14T08:26:58,924 instead of `find_packages(...)`/`find:`). 2023-05-14T08:26:58,925 You can read more about "package discovery" on setuptools documentation page: 2023-05-14T08:26:58,925 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-14T08:26:58,926 If you don't want 'biom.assets' to be distributed and are 2023-05-14T08:26:58,926 already explicitly excluding 'biom.assets' via 2023-05-14T08:26:58,926 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-14T08:26:58,927 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-14T08:26:58,927 combination with a more fine grained `package-data` configuration. 2023-05-14T08:26:58,928 You can read more about "package data files" on setuptools documentation page: 2023-05-14T08:26:58,928 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-14T08:26:58,929 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-14T08:26:58,930 even if it does not contain any `.py` files. 2023-05-14T08:26:58,930 On the other hand, currently there is no concept of package data 2023-05-14T08:26:58,930 directory, all directories are treated like packages. 2023-05-14T08:26:58,931 ******************************************************************************** 2023-05-14T08:26:58,931 !! 2023-05-14T08:26:58,931 check.warn(importable) 2023-05-14T08:26:58,932 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration. 2023-05-14T08:26:58,932 !! 2023-05-14T08:26:58,933 ******************************************************************************** 2023-05-14T08:26:58,933 ############################ 2023-05-14T08:26:58,933 # Package would be ignored # 2023-05-14T08:26:58,934 ############################ 2023-05-14T08:26:58,934 Python recognizes 'biom.tests.bench_tables' as an importable package[^1], 2023-05-14T08:26:58,935 but it is absent from setuptools' `packages` configuration. 2023-05-14T08:26:58,936 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-14T08:26:58,936 package, please make sure that 'biom.tests.bench_tables' is explicitly added 2023-05-14T08:26:58,937 to the `packages` configuration field. 2023-05-14T08:26:58,938 Alternatively, you can also rely on setuptools' discovery methods 2023-05-14T08:26:58,938 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-14T08:26:58,939 instead of `find_packages(...)`/`find:`). 2023-05-14T08:26:58,940 You can read more about "package discovery" on setuptools documentation page: 2023-05-14T08:26:58,941 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-14T08:26:58,942 If you don't want 'biom.tests.bench_tables' to be distributed and are 2023-05-14T08:26:58,942 already explicitly excluding 'biom.tests.bench_tables' via 2023-05-14T08:26:58,943 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-14T08:26:58,943 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-14T08:26:58,944 combination with a more fine grained `package-data` configuration. 2023-05-14T08:26:58,945 You can read more about "package data files" on setuptools documentation page: 2023-05-14T08:26:58,946 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-14T08:26:58,947 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-14T08:26:58,947 even if it does not contain any `.py` files. 2023-05-14T08:26:58,948 On the other hand, currently there is no concept of package data 2023-05-14T08:26:58,948 directory, all directories are treated like packages. 2023-05-14T08:26:58,949 ******************************************************************************** 2023-05-14T08:26:58,950 !! 2023-05-14T08:26:58,950 check.warn(importable) 2023-05-14T08:26:58,951 /tmp/pip-build-env-c6f43lzx/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration. 2023-05-14T08:26:58,951 !! 2023-05-14T08:26:58,952 ******************************************************************************** 2023-05-14T08:26:58,953 ############################ 2023-05-14T08:26:58,953 # Package would be ignored # 2023-05-14T08:26:58,953 ############################ 2023-05-14T08:26:58,954 Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1], 2023-05-14T08:26:58,954 but it is absent from setuptools' `packages` configuration. 2023-05-14T08:26:58,955 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-14T08:26:58,956 package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added 2023-05-14T08:26:58,956 to the `packages` configuration field. 2023-05-14T08:26:58,957 Alternatively, you can also rely on setuptools' discovery methods 2023-05-14T08:26:58,957 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-14T08:26:58,958 instead of `find_packages(...)`/`find:`). 2023-05-14T08:26:58,958 You can read more about "package discovery" on setuptools documentation page: 2023-05-14T08:26:58,959 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-14T08:26:58,960 If you don't want 'biom.tests.test_cli.test_data' to be distributed and are 2023-05-14T08:26:58,960 already explicitly excluding 'biom.tests.test_cli.test_data' via 2023-05-14T08:26:58,961 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-14T08:26:58,961 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-14T08:26:58,962 combination with a more fine grained `package-data` configuration. 2023-05-14T08:26:58,963 You can read more about "package data files" on setuptools documentation page: 2023-05-14T08:26:58,963 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-14T08:26:58,965 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-14T08:26:58,965 even if it does not contain any `.py` files. 2023-05-14T08:26:58,966 On the other hand, currently there is no concept of package data 2023-05-14T08:26:58,966 directory, all directories are treated like packages. 2023-05-14T08:26:58,966 ******************************************************************************** 2023-05-14T08:26:58,967 !! 2023-05-14T08:26:58,967 check.warn(importable) 2023-05-14T08:26:59,235 Building wheel for biom-format (pyproject.toml): finished with status 'done' 2023-05-14T08:26:59,957 Created wheel for biom-format: filename=biom_format-2.1.15-cp37-cp37m-linux_armv7l.whl size=11823628 sha256=8c1abc435491cbae99b546242db95bb7579d6d1f8a07e35ec39af8e606858970 2023-05-14T08:26:59,959 Stored in directory: /tmp/pip-ephem-wheel-cache-7a_p_1q3/wheels/44/da/1b/858833caabc495a0de1f38d872a9b3e7879b522e2f7372dfe8 2023-05-14T08:27:00,011 Successfully built biom-format 2023-05-14T08:27:00,922 Removed build tracker: '/tmp/pip-build-tracker-hg_zxtvg'