2023-05-14T18:54:18,495 Created temporary directory: /tmp/pip-build-tracker-y4f5_i1v
2023-05-14T18:54:18,497 Initialized build tracking at /tmp/pip-build-tracker-y4f5_i1v
2023-05-14T18:54:18,497 Created build tracker: /tmp/pip-build-tracker-y4f5_i1v
2023-05-14T18:54:18,497 Entered build tracker: /tmp/pip-build-tracker-y4f5_i1v
2023-05-14T18:54:18,498 Created temporary directory: /tmp/pip-wheel-5vpljy06
2023-05-14T18:54:18,501 Created temporary directory: /tmp/pip-ephem-wheel-cache-j9_zcjoe
2023-05-14T18:54:18,526 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-05-14T18:54:18,530 2 location(s) to search for versions of filter-vcf:
2023-05-14T18:54:18,530 * https://pypi.org/simple/filter-vcf/
2023-05-14T18:54:18,530 * https://www.piwheels.org/simple/filter-vcf/
2023-05-14T18:54:18,530 Fetching project page and analyzing links: https://pypi.org/simple/filter-vcf/
2023-05-14T18:54:18,530 Getting page https://pypi.org/simple/filter-vcf/
2023-05-14T18:54:18,532 Found index url https://pypi.org/simple/
2023-05-14T18:54:18,662 Fetched page https://pypi.org/simple/filter-vcf/ as application/vnd.pypi.simple.v1+json
2023-05-14T18:54:18,666   Found link https://files.pythonhosted.org/packages/14/ad/12d1fdc43822ea8fad6b66b7c93b08c28557af47c52287f67716b90a690b/filter-vcf-0.1.0.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9), version: 0.1.0
2023-05-14T18:54:18,666   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/12/eb/b640265581c431f4e98b2dbbd41e34114d721db0305107f7c9d5c063e920/filter_vcf-0.1.0-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9)
2023-05-14T18:54:18,667   Found link https://files.pythonhosted.org/packages/50/e5/08657e90e93689c57faf85795fdcfaac249b66d3f069f5725949e597b84e/filter-vcf-0.1.1.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9), version: 0.1.1
2023-05-14T18:54:18,667   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/d1/56/70b781d8753d7f69b7e5a991ee1f5740d1595576edd5eb8aefe3fec5c064/filter_vcf-0.1.1-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9)
2023-05-14T18:54:18,668   Found link https://files.pythonhosted.org/packages/8f/4c/fe3c1f76d1fc7996baf74e0dc400c89592380b0e3b1cb3ed0b168c177f71/filter-vcf-0.1.2.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11), version: 0.1.2
2023-05-14T18:54:18,668   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/b9/72/b89bd2c386d058530a56990642d3a0fcd8c71d33bfe714d993a9c5f15585/filter_vcf-0.1.2-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,669   Found link https://files.pythonhosted.org/packages/83/46/baaec6297e339090a3343e1d91c434b8544cb70a57b6086a4af4ff1860b0/filter-vcf-0.1.3.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11), version: 0.1.3
2023-05-14T18:54:18,669   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/27/12/ef62720440565208c200a19ee704a8123099027b31800716db7925bb8fad/filter_vcf-0.1.3-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,670   Found link https://files.pythonhosted.org/packages/cf/62/2c8c337c9df456769247e60fcaeda7efe002dd120de4eb8252baaa3ac455/filter-vcf-0.1.5.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11), version: 0.1.5
2023-05-14T18:54:18,670   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/00/ac/be7ad81fdd7d9fbc9e020d57c5c13a369b803ade93888daf6b7483303101/filter_vcf-0.1.5-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,671   Found link https://files.pythonhosted.org/packages/c8/97/d7de1314db39974a704f73a5b110d13b8c3f8f37327f08dd2c2f72748780/filter-vcf-0.1.6.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11), version: 0.1.6
2023-05-14T18:54:18,671   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/af/88/0f9d2554cddc7c3575b75bc0f07403038e2c613c9a949bb7b818b76c378e/filter_vcf-0.1.6-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,671   Found link https://files.pythonhosted.org/packages/ea/73/7c3724cc1f3c326be82a0cb36bfceb5135ca52cbb5dee4a60b4774388a2a/filter-vcf-0.1.7.tar.gz (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11), version: 0.1.7
2023-05-14T18:54:18,672   Skipping link: No binaries permitted for filter-vcf: https://files.pythonhosted.org/packages/1e/52/77a04dd35cd44a330ead570531debce6f196874696fe73746e8fa5869d59/filter_vcf-0.1.7-py3-none-any.whl (from https://pypi.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,672 Fetching project page and analyzing links: https://www.piwheels.org/simple/filter-vcf/
2023-05-14T18:54:18,672 Getting page https://www.piwheels.org/simple/filter-vcf/
2023-05-14T18:54:18,673 Found index url https://www.piwheels.org/simple/
2023-05-14T18:54:18,848 Fetched page https://www.piwheels.org/simple/filter-vcf/ as text/html
2023-05-14T18:54:18,851   Skipping link: No binaries permitted for filter-vcf: https://www.piwheels.org/simple/filter-vcf/filter_vcf-0.1.6-py3-none-any.whl#sha256=1ad033676b48feacbb3e0cdb862df3796cb5f70c6c948bc9d6fd124270bb62b1 (from https://www.piwheels.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,852   Skipping link: No binaries permitted for filter-vcf: https://www.piwheels.org/simple/filter-vcf/filter_vcf-0.1.5-py3-none-any.whl#sha256=3b01c099b9fd4b745912e394121f61068ebecda6199dc31fb0d90c3ac74d532f (from https://www.piwheels.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,852   Skipping link: No binaries permitted for filter-vcf: https://www.piwheels.org/simple/filter-vcf/filter_vcf-0.1.3-py3-none-any.whl#sha256=52246d248eaf144956a066b9537744d63d83869ff5e1fd8760215709646c5cba (from https://www.piwheels.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,852   Skipping link: No binaries permitted for filter-vcf: https://www.piwheels.org/simple/filter-vcf/filter_vcf-0.1.2-py3-none-any.whl#sha256=c86db06a4980a9501e56ab8bcde8ce9b87f00c0dabda8dba7cd2bdd14096a842 (from https://www.piwheels.org/simple/filter-vcf/) (requires-python:>=3.9,<3.11)
2023-05-14T18:54:18,852   Skipping link: No binaries permitted for filter-vcf: https://www.piwheels.org/simple/filter-vcf/filter_vcf-0.1.1-py3-none-any.whl#sha256=0751980f601764866fa2fec061be6e156b827f91a80d75f137985d21c8ce04b7 (from https://www.piwheels.org/simple/filter-vcf/) (requires-python:>=3.9)
2023-05-14T18:54:18,852   Skipping link: No binaries permitted for filter-vcf: https://www.piwheels.org/simple/filter-vcf/filter_vcf-0.1.0-py3-none-any.whl#sha256=dc92397b7db3772b542b10878d03d673d7227377235dbc6e72cb184ea0bccacd (from https://www.piwheels.org/simple/filter-vcf/) (requires-python:>=3.9)
2023-05-14T18:54:18,853 Skipping link: not a file: https://www.piwheels.org/simple/filter-vcf/
2023-05-14T18:54:18,853 Skipping link: not a file: https://pypi.org/simple/filter-vcf/
2023-05-14T18:54:18,872 Given no hashes to check 1 links for project 'filter-vcf': discarding no candidates
2023-05-14T18:54:18,890 Collecting filter-vcf==0.1.7
2023-05-14T18:54:18,892   Created temporary directory: /tmp/pip-unpack-6pqjpxcb
2023-05-14T18:54:19,017   Downloading filter-vcf-0.1.7.tar.gz (217 kB)
2023-05-14T18:54:19,133   Added filter-vcf==0.1.7 from https://files.pythonhosted.org/packages/ea/73/7c3724cc1f3c326be82a0cb36bfceb5135ca52cbb5dee4a60b4774388a2a/filter-vcf-0.1.7.tar.gz to build tracker '/tmp/pip-build-tracker-y4f5_i1v'
2023-05-14T18:54:19,137   Created temporary directory: /tmp/pip-build-env-zipb351t
2023-05-14T18:54:19,149   Installing build dependencies: started
2023-05-14T18:54:19,150   Running command pip subprocess to install build dependencies
2023-05-14T18:54:20,414   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-05-14T18:54:20,784   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-05-14T18:54:21,242   Collecting pdm-pep517>=0.12.0
2023-05-14T18:54:21,271     Using cached https://www.piwheels.org/simple/pdm-pep517/pdm_pep517-1.1.4-py3-none-any.whl (216 kB)
2023-05-14T18:54:22,764   Installing collected packages: pdm-pep517
2023-05-14T18:54:23,316   Successfully installed pdm-pep517-1.1.4
2023-05-14T18:54:23,532   Installing build dependencies: finished with status 'done'
2023-05-14T18:54:23,538   Getting requirements to build wheel: started
2023-05-14T18:54:23,539   Running command Getting requirements to build wheel
2023-05-14T18:54:24,026   Getting requirements to build wheel: finished with status 'done'
2023-05-14T18:54:24,031   Created temporary directory: /tmp/pip-modern-metadata-ciwy6x2j
2023-05-14T18:54:24,034   Preparing metadata (pyproject.toml): started
2023-05-14T18:54:24,035   Running command Preparing metadata (pyproject.toml)
2023-05-14T18:54:24,492   /tmp/pip-build-env-zipb351t/overlay/lib/python3.9/site-packages/pdm/pep517/api.py:51: PDMWarning: No license files are matched with glob patterns ['LICENSES/*', 'LICEN[CS]E*', 'COPYING*', 'NOTICE*', 'AUTHORS*'].
2023-05-14T18:54:24,492     for license_file in builder.find_license_files():
2023-05-14T18:54:24,528   Preparing metadata (pyproject.toml): finished with status 'done'
2023-05-14T18:54:24,535   Source in /tmp/pip-wheel-5vpljy06/filter-vcf_b23ca466a7a74165b10061a116855fd3 has version 0.1.7, which satisfies requirement filter-vcf==0.1.7 from https://files.pythonhosted.org/packages/ea/73/7c3724cc1f3c326be82a0cb36bfceb5135ca52cbb5dee4a60b4774388a2a/filter-vcf-0.1.7.tar.gz
2023-05-14T18:54:24,536   Removed filter-vcf==0.1.7 from https://files.pythonhosted.org/packages/ea/73/7c3724cc1f3c326be82a0cb36bfceb5135ca52cbb5dee4a60b4774388a2a/filter-vcf-0.1.7.tar.gz from build tracker '/tmp/pip-build-tracker-y4f5_i1v'
2023-05-14T18:54:24,542 Created temporary directory: /tmp/pip-unpack-czzmin23
2023-05-14T18:54:24,543 Building wheels for collected packages: filter-vcf
2023-05-14T18:54:24,548   Created temporary directory: /tmp/pip-wheel-ga332r_9
2023-05-14T18:54:24,548   Destination directory: /tmp/pip-wheel-ga332r_9
2023-05-14T18:54:24,551   Building wheel for filter-vcf (pyproject.toml): started
2023-05-14T18:54:24,552   Running command Building wheel for filter-vcf (pyproject.toml)
2023-05-14T18:54:25,065    - Adding filter_vcf/__init__.py
2023-05-14T18:54:25,066    - Adding filter_vcf/filter_vcf.py
2023-05-14T18:54:25,066    - Adding filter_vcf/process.py
2023-05-14T18:54:25,066    - Adding filter_vcf/util/__init__.py
2023-05-14T18:54:25,067    - Adding filter_vcf/util/addDepth.py
2023-05-14T18:54:25,067    - Adding filter_vcf/util/checkArgs.py
2023-05-14T18:54:25,067    - Adding filter_vcf/util/cleanAD.py
2023-05-14T18:54:25,067    - Adding filter_vcf/util/cleanGT.py
2023-05-14T18:54:25,068    - Adding filter_vcf/util/convertChrName.py
2023-05-14T18:54:25,068    - Adding filter_vcf/util/detectVcf.py
2023-05-14T18:54:25,068    - Adding filter_vcf/util/readVcf.py
2023-05-14T18:54:25,069    - Adding filter_vcf/util/removeNonRef.py
2023-05-14T18:54:25,069    - Adding filter_vcf/util/sortVcf.py
2023-05-14T18:54:25,069    - Adding filter_vcf/util/unique.py
2023-05-14T18:54:25,069    - Adding filter_vcf/util/userFilter.py
2023-05-14T18:54:25,070    - Adding filter_vcf/util/writeVcf.py
2023-05-14T18:54:25,070    - Adding filter_vcf-0.1.7.dist-info/METADATA
2023-05-14T18:54:25,070    - Adding filter_vcf-0.1.7.dist-info/WHEEL
2023-05-14T18:54:25,099   Building wheel for filter-vcf (pyproject.toml): finished with status 'done'
2023-05-14T18:54:25,105   Created wheel for filter-vcf: filename=filter_vcf-0.1.7-py3-none-any.whl size=12106 sha256=a3af7c36936d7ed5726d2ec551662bb08d965445b853291b083d72eb92fe3737
2023-05-14T18:54:25,106   Stored in directory: /tmp/pip-ephem-wheel-cache-j9_zcjoe/wheels/75/1f/eb/d8fc99052c41a9c89937a9fdeb054682228196eaf69fcffec4
2023-05-14T18:54:25,117 Successfully built filter-vcf
2023-05-14T18:54:25,121 Removed build tracker: '/tmp/pip-build-tracker-y4f5_i1v'