2023-05-16T23:15:35,908 Created temporary directory: /tmp/pip-build-tracker-kyp3le0g 2023-05-16T23:15:35,909 Initialized build tracking at /tmp/pip-build-tracker-kyp3le0g 2023-05-16T23:15:35,909 Created build tracker: /tmp/pip-build-tracker-kyp3le0g 2023-05-16T23:15:35,909 Entered build tracker: /tmp/pip-build-tracker-kyp3le0g 2023-05-16T23:15:35,910 Created temporary directory: /tmp/pip-wheel-vd35xlu6 2023-05-16T23:15:35,913 Created temporary directory: /tmp/pip-ephem-wheel-cache-6_smwnr_ 2023-05-16T23:15:35,938 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-16T23:15:35,941 2 location(s) to search for versions of biom-format: 2023-05-16T23:15:35,941 * https://pypi.org/simple/biom-format/ 2023-05-16T23:15:35,941 * https://www.piwheels.org/simple/biom-format/ 2023-05-16T23:15:35,942 Fetching project page and analyzing links: https://pypi.org/simple/biom-format/ 2023-05-16T23:15:35,942 Getting page https://pypi.org/simple/biom-format/ 2023-05-16T23:15:35,944 Found index url https://pypi.org/simple/ 2023-05-16T23:15:35,993 Fetched page https://pypi.org/simple/biom-format/ as application/vnd.pypi.simple.v1+json 2023-05-16T23:15:36,001 Found link https://files.pythonhosted.org/packages/e8/a0/0b4947cd716f8923410be46d0473442e906e80fd605d1f900667224878a9/biom-format-1.2.0-dev.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.2.0-dev 2023-05-16T23:15:36,001 Found link https://files.pythonhosted.org/packages/5d/a6/50855b83db9932d78ff10721d90f79725729040db8117ce2c5a1e50c3a75/biom-format-1.3.0.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.3.0 2023-05-16T23:15:36,001 Found link https://files.pythonhosted.org/packages/98/3b/4e80a9a5c4a3c6764aa8c0c994973e7df71eee02fc6b8cc6e1d06a64ab7e/biom-format-1.3.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.3.1 2023-05-16T23:15:36,002 Found link https://files.pythonhosted.org/packages/ab/62/b44f747c549c2cb3408462905461ae8d0975163c927b4ac4452321368815/biom-format-2.0.0.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.0.0 2023-05-16T23:15:36,002 Found link https://files.pythonhosted.org/packages/26/14/46ce3a0c94b4e5f03473b029be7df19341c525c92d310443ca1bd935c4c1/biom-format-2.0.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.0.1 2023-05-16T23:15:36,002 Found link https://files.pythonhosted.org/packages/bc/8e/c937b6997062dfc70cd6fc6f53b70703dcec400e39af2d43542349f7ace6/biom-format-2.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1 2023-05-16T23:15:36,003 Found link https://files.pythonhosted.org/packages/40/45/a7a64146c75f00cf9889753d39a0371adf2982ee3f1eb31c28efbb5a3529/biom-format-2.1.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.1 2023-05-16T23:15:36,003 Found link https://files.pythonhosted.org/packages/d9/de/65d8089e4aab975658f80c4975015fb5c761fe4c37868cc317733f33d0cd/biom-format-2.1.2.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.2 2023-05-16T23:15:36,003 Found link https://files.pythonhosted.org/packages/9d/ed/1ff2ee2d16aa3edd66e8f07f11321eb9b9cd478307d87674c633ba9b081a/biom-format-2.1.3.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.3 2023-05-16T23:15:36,003 Found link https://files.pythonhosted.org/packages/2e/8e/f8575e51764697c485f7e81dfc31ff72d8b2c4b50e88c23094be65814451/biom-format-2.1.4.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.4 2023-05-16T23:15:36,004 Found link https://files.pythonhosted.org/packages/e8/74/9b7e50c29ba548cd53eb97fb9cc1f05a2cf53aa179a64f36e93282b84f79/biom-format-2.1.5.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.5 2023-05-16T23:15:36,004 Found link https://files.pythonhosted.org/packages/46/a6/fccc2f5db587d7d896b52054aa5a9f0f7fd8fb6ad23ab9a02934d4cb1739/biom-format-2.1.6.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.6 2023-05-16T23:15:36,004 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/c2/10/ed278d6263ad222b5327f127f07afaadff7dc7ae8482592b9c05500e976d/biom_format-2.1.6-cp27-cp27m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/biom-format/) 2023-05-16T23:15:36,005 Found link https://files.pythonhosted.org/packages/25/92/ca4688a006b784bcc1f118c4a53e9aadc78d78abf8ff58ee11d29ac950a4/biom-format-2.1.7.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.7 2023-05-16T23:15:36,005 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/d1/84/0521b9203bb525c2d6a06905be950f29ca98e60a12dca71dfd18bffe7d92/biom_format-2.1.7-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/biom-format/) 2023-05-16T23:15:36,005 Found link https://files.pythonhosted.org/packages/c1/c6/3b4284680b390a6c0a39de2fddddfe19a28d1bdceb5951713c483c147f44/biom-format-2.1.8-1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.8-1 2023-05-16T23:15:36,005 Found link https://files.pythonhosted.org/packages/4b/50/65e535736597ce91e82a8e3e83cf1e88735368b58f99585f600b854f0bc9/biom-format-2.1.9.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.9 2023-05-16T23:15:36,006 Found link https://files.pythonhosted.org/packages/2b/8f/ef865d43a06dd3d1b09808fbd129074e64127fa8db0b93b5e0cf1d1a50de/biom-format-2.1.10.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.10 2023-05-16T23:15:36,006 Found link https://files.pythonhosted.org/packages/fc/3f/7eb762b52f490b810b1686fd41cd6f3f7f33c0dab29c4273c96e9a1641a2/biom-format-2.1.12.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.12 2023-05-16T23:15:36,007 Found link https://files.pythonhosted.org/packages/90/57/0a326e17005b25e56f6e25b8b1e3eae299b7f6d53af06b11c4830d631612/biom-format-2.1.13.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.13 2023-05-16T23:15:36,008 Found link https://files.pythonhosted.org/packages/8e/2c/132267e58172821fc15fa3856f53ed09b607837fe06e2bb60b230005951d/biom-format-2.1.14.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.14 2023-05-16T23:15:36,008 Found link https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.15 2023-05-16T23:15:36,008 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/52/9b/f3d2fcc1d0141e86e08330c7516d750662f8a3df40c7f5ef8d633fc485b1/biom_format-2.1.15-cp310-cp310-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,009 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/69/1a/8346a46e7b68aa49a7303d8cf9a12c7c08ee1d0a2142f1066c906a99def0/biom_format-2.1.15-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,009 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/ed/d4/6e42221bbbfee00aa96692583cef753a3f0b455b26854fd7111740a81999/biom_format-2.1.15-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,009 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/0b/2d/18978cf47787f2435d2d288d58c76e891b466845f670ffc14cd5455aca94/biom_format-2.1.15-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,009 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/63/ad/148ed220742d9d8995805a86877867551733a01edaf8e95a214ad36e051e/biom_format-2.1.15-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,009 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/ae/b6/da4325213838fe4d078da9f73d913838959680217d2188b240818216113d/biom_format-2.1.15-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,010 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/2e/cf/4bc7592b3c48664c4c927547983814c4708c248ff3d753b0d60ac0ad7250/biom_format-2.1.15-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,010 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/7d/8a/6ea8c3bc9d61dcf46c6e7ccaf11ce07d46184a0b0e1ed31b8ec36db94e89/biom_format-2.1.15-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,010 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/ca/0d/64c1e729685aa1de049816f0972b9be78a9b8489a7b9ba1dc9ff6bc9f95e/biom_format-2.1.15-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,010 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/93/c5/5d6c2adce1ad1288c9d13a689971582fc556c5c3b7523c20b25dec4a8ae8/biom_format-2.1.15-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,010 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/74/bb/bdf0f58bcf7a6d287e94d94b3464263b62f04068f2109a4380efda6a025d/biom_format-2.1.15-cp38-cp38-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,011 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/14/fe/dc90a6ec894343130e40fca22c7c324fbd08d5f48559d2d7730cfa768a72/biom_format-2.1.15-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,011 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/9c/36/b2dcba3e20fe23f839e9641a9e5e600a342c422ab07bc54c6383a3980deb/biom_format-2.1.15-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,011 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/95/f4/65a3d3bdadff352d97e410173bcbf80ea5dfeefdf18588232d2029eac0d6/biom_format-2.1.15-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,011 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/0a/eb/5a836a2d9314e0a93db6c3cbb4f5a1019171ada3b8b0ff2e0c9bdbdcfc97/biom_format-2.1.15-cp39-cp39-macosx_10_9_universal2.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,011 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/4d/2a/9f1f3ea15f5894392ea77518f0982ebaac93b3c274c2762ea23defebf422/biom_format-2.1.15-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,011 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/c4/f0/53a3e6a04d281e67b3d2745b9a9163c6be3a11970cf5150d73037a6c3cca/biom_format-2.1.15-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,012 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/50/14/4bf1e8766a9e4df3c2945e0d70f960985c0886ebcd09fd7d95bebeba9ff1/biom_format-2.1.15-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,012 Fetching project page and analyzing links: https://www.piwheels.org/simple/biom-format/ 2023-05-16T23:15:36,012 Getting page https://www.piwheels.org/simple/biom-format/ 2023-05-16T23:15:36,013 Found index url https://www.piwheels.org/simple/ 2023-05-16T23:15:36,264 Fetched page https://www.piwheels.org/simple/biom-format/ as text/html 2023-05-16T23:15:36,290 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.15-cp39-cp39-linux_aarch64.whl#sha256=0fd8130daf8783a4586a0b15cae627a09a4df2c5503e61113aac0f7d36570e60 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,290 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.15-cp37-cp37m-linux_armv7l.whl#sha256=8c1abc435491cbae99b546242db95bb7579d6d1f8a07e35ec39af8e606858970 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,290 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.15-cp37-cp37m-linux_armv6l.whl#sha256=8c1abc435491cbae99b546242db95bb7579d6d1f8a07e35ec39af8e606858970 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,291 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp39-cp39-linux_armv7l.whl#sha256=ca23d062853e5ba6f0c54ba8cb321444b60c337ff96c5d08f2f365fdf3e7afc0 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,291 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp39-cp39-linux_armv6l.whl#sha256=ca23d062853e5ba6f0c54ba8cb321444b60c337ff96c5d08f2f365fdf3e7afc0 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,291 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp37-cp37m-linux_armv7l.whl#sha256=45dd2e44b2b46efdafb7678246b670cff402736187481b12f037d7f0c4d8f8e1 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,291 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.14-cp37-cp37m-linux_armv6l.whl#sha256=45dd2e44b2b46efdafb7678246b670cff402736187481b12f037d7f0c4d8f8e1 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,291 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp39-cp39-linux_armv7l.whl#sha256=80b341578111894f67221800901df758240597ef524df0db82477061329f821a (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,291 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp39-cp39-linux_armv6l.whl#sha256=80b341578111894f67221800901df758240597ef524df0db82477061329f821a (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,292 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp37-cp37m-linux_armv7l.whl#sha256=497b24d7afb924a1d676e19148c410da9bcf85cd8edb8a94151b5e550426311b (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,292 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp37-cp37m-linux_armv6l.whl#sha256=497b24d7afb924a1d676e19148c410da9bcf85cd8edb8a94151b5e550426311b (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,292 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.12-cp39-cp39-linux_armv7l.whl#sha256=28c6a62b9565f15dad3e58c960d180ab30f76bbf4bc1dfb23b38d7fdbae87af5 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-05-16T23:15:36,292 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp39-cp39-linux_armv6l.whl#sha256=04f3a0c8fe42dbbaffb498aada51a9b035b206ba20bb943d4e5fc3413120b7d3 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,304 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp37-cp37m-linux_armv7l.whl#sha256=f0d77a8352318f4e2aa6d54413574054b8268e54af9b4153c4bdedcc15dfee31 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,304 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp37-cp37m-linux_armv6l.whl#sha256=f0d77a8352318f4e2aa6d54413574054b8268e54af9b4153c4bdedcc15dfee31 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,304 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp34-cp34m-linux_armv7l.whl#sha256=04a1f7a1c6308672de88610e482f8822cb9c1e2ddb20314d1f24f25152ffd9b6 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,305 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp34-cp34m-linux_armv6l.whl#sha256=04a1f7a1c6308672de88610e482f8822cb9c1e2ddb20314d1f24f25152ffd9b6 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,305 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp35-cp35m-linux_armv6l.whl#sha256=3f2a1b568c31077f0158d5c362ce35bf12b8113fa9d1e1b1b4ceef14d9828a61 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,305 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp35-cp35m-linux_armv7l.whl#sha256=3f2a1b568c31077f0158d5c362ce35bf12b8113fa9d1e1b1b4ceef14d9828a61 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,305 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=d6182bef514f635438b834481309528194ee4cce9ca22cbebd602f0fd535ec3d (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,305 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=d6182bef514f635438b834481309528194ee4cce9ca22cbebd602f0fd535ec3d (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,306 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=55924baa1b7bcef023e8870d31644130fd348f27a5059f390115178a08efc9c6 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,306 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=55924baa1b7bcef023e8870d31644130fd348f27a5059f390115178a08efc9c6 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,306 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp35-cp35m-linux_armv7l.whl#sha256=53eaec7d407e2aecad03305cfaac5028a0691af5d105041748bb7bce007a62ba (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,306 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp35-cp35m-linux_armv6l.whl#sha256=53eaec7d407e2aecad03305cfaac5028a0691af5d105041748bb7bce007a62ba (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,306 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp34-cp34m-linux_armv7l.whl#sha256=7da34e0d1c989db527bf0c9f694424dc0c0822f5ac262a48b53b16fb2e1b0b8b (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,307 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp34-cp34m-linux_armv6l.whl#sha256=7da34e0d1c989db527bf0c9f694424dc0c0822f5ac262a48b53b16fb2e1b0b8b (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,307 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp39-cp39-linux_armv7l.whl#sha256=7f2584f3e1b8e8897d7c7b4fbaf097a44a847fda65a385f8bda36b9177394b68 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,307 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp39-cp39-linux_armv6l.whl#sha256=7f2584f3e1b8e8897d7c7b4fbaf097a44a847fda65a385f8bda36b9177394b68 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,307 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp37-cp37m-linux_armv6l.whl#sha256=7a626aba8ff823cc9f782efde594c9996cfb48f2c2b456a2ed55c88977f2d1d1 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,307 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp37-cp37m-linux_armv7l.whl#sha256=7a626aba8ff823cc9f782efde594c9996cfb48f2c2b456a2ed55c88977f2d1d1 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,307 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp35-cp35m-linux_armv6l.whl#sha256=117a559c6cc285a8c0e94138f1585e93ccef7862532d78e61d3f14d96ab4120f (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,308 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp35-cp35m-linux_armv7l.whl#sha256=117a559c6cc285a8c0e94138f1585e93ccef7862532d78e61d3f14d96ab4120f (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,308 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp34-cp34m-linux_armv7l.whl#sha256=65a3ba75376f8e5cacf4f89448fcc9ca10489d5a7203a89b71e8d9c71919fe33 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,308 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp34-cp34m-linux_armv6l.whl#sha256=65a3ba75376f8e5cacf4f89448fcc9ca10489d5a7203a89b71e8d9c71919fe33 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,308 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-1.3.1-py3-none-any.whl#sha256=f0b5649cb13509667e6ca75c84e68a1ff1de6716848e8d4f9a3ca8f8ca74b8df (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,308 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-1.3.0-py3-none-any.whl#sha256=ee9d81bea91a7c7da55697863c1b003aca4d14b7f7416fcb8c22e169e54aabe6 (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,309 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-1.2.0.dev0-py3-none-any.whl#sha256=1c6e81249da6f3e19dd7594733329820632b1b6b0355abe79af180116c3b8aba (from https://www.piwheels.org/simple/biom-format/) 2023-05-16T23:15:36,309 Skipping link: not a file: https://www.piwheels.org/simple/biom-format/ 2023-05-16T23:15:36,309 Skipping link: not a file: https://pypi.org/simple/biom-format/ 2023-05-16T23:15:36,328 Given no hashes to check 1 links for project 'biom-format': discarding no candidates 2023-05-16T23:15:36,343 Collecting biom-format==2.1.15 2023-05-16T23:15:36,345 Created temporary directory: /tmp/pip-unpack-46kvmjcb 2023-05-16T23:15:36,395 Downloading biom-format-2.1.15.tar.gz (11.7 MB) 2023-05-16T23:15:39,417 Added biom-format==2.1.15 from https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz to build tracker '/tmp/pip-build-tracker-kyp3le0g' 2023-05-16T23:15:39,422 Created temporary directory: /tmp/pip-build-env-dbr00yd8 2023-05-16T23:15:39,433 Installing build dependencies: started 2023-05-16T23:15:39,434 Running command pip subprocess to install build dependencies 2023-05-16T23:15:40,609 Using pip 23.1.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-05-16T23:15:41,041 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-16T23:15:42,705 Collecting setuptools 2023-05-16T23:15:42,787 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.7.2-py3-none-any.whl (1.1 MB) 2023-05-16T23:15:43,043 Collecting wheel 2023-05-16T23:15:43,060 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-05-16T23:15:44,242 Collecting numpy 2023-05-16T23:15:45,141 Using cached https://www.piwheels.org/simple/numpy/numpy-1.24.3-cp39-cp39-linux_armv7l.whl (12.3 MB) 2023-05-16T23:15:46,808 Collecting cython 2023-05-16T23:15:47,220 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.34-cp39-cp39-linux_armv7l.whl (5.0 MB) 2023-05-16T23:15:49,048 Installing collected packages: wheel, setuptools, numpy, cython 2023-05-16T23:15:49,259 Creating /tmp/pip-build-env-dbr00yd8/overlay/bin 2023-05-16T23:15:49,261 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/wheel to 755 2023-05-16T23:15:59,587 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/f2py to 755 2023-05-16T23:15:59,589 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/f2py3 to 755 2023-05-16T23:15:59,591 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/f2py3.9 to 755 2023-05-16T23:16:02,312 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/cygdb to 755 2023-05-16T23:16:02,314 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/cython to 755 2023-05-16T23:16:02,317 changing mode of /tmp/pip-build-env-dbr00yd8/overlay/bin/cythonize to 755 2023-05-16T23:16:02,340 Successfully installed cython-0.29.34 numpy-1.24.3 setuptools-67.7.2 wheel-0.40.0 2023-05-16T23:16:02,731 Installing build dependencies: finished with status 'done' 2023-05-16T23:16:02,741 Getting requirements to build wheel: started 2023-05-16T23:16:02,742 Running command Getting requirements to build wheel 2023-05-16T23:16:04,543 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-vd35xlu6/biom-format_91a8055e1e50471fbaba96db1285b3de/biom/_filter.pyx 2023-05-16T23:16:04,543 tree = Parsing.p_module(s, pxd, full_module_name) 2023-05-16T23:16:05,384 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-vd35xlu6/biom-format_91a8055e1e50471fbaba96db1285b3de/biom/_subsample.pyx 2023-05-16T23:16:05,384 tree = Parsing.p_module(s, pxd, full_module_name) 2023-05-16T23:16:06,124 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-vd35xlu6/biom-format_91a8055e1e50471fbaba96db1285b3de/biom/_transform.pyx 2023-05-16T23:16:06,124 tree = Parsing.p_module(s, pxd, full_module_name) 2023-05-16T23:16:06,723 Compiling biom/_filter.pyx because it changed. 2023-05-16T23:16:06,723 Compiling biom/_transform.pyx because it changed. 2023-05-16T23:16:06,723 Compiling biom/_subsample.pyx because it changed. 2023-05-16T23:16:06,723 [1/3] Cythonizing biom/_filter.pyx 2023-05-16T23:16:06,723 [2/3] Cythonizing biom/_subsample.pyx 2023-05-16T23:16:06,723 [3/3] Cythonizing biom/_transform.pyx 2023-05-16T23:16:06,831 running egg_info 2023-05-16T23:16:06,838 writing biom_format.egg-info/PKG-INFO 2023-05-16T23:16:06,840 writing dependency_links to biom_format.egg-info/dependency_links.txt 2023-05-16T23:16:06,842 writing entry points to biom_format.egg-info/entry_points.txt 2023-05-16T23:16:06,843 writing requirements to biom_format.egg-info/requires.txt 2023-05-16T23:16:06,845 writing top-level names to biom_format.egg-info/top_level.txt 2023-05-16T23:16:06,876 reading manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:06,900 reading manifest template 'MANIFEST.in' 2023-05-16T23:16:06,912 warning: no directories found matching 'support_files' 2023-05-16T23:16:06,920 warning: no directories found matching 'tests/test_data' 2023-05-16T23:16:06,921 no previously-included directories found matching 'docs/_build' 2023-05-16T23:16:06,923 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-16T23:16:06,925 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-05-16T23:16:06,926 warning: no previously-included files matching '.git' found anywhere in distribution 2023-05-16T23:16:06,929 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-05-16T23:16:06,931 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-05-16T23:16:06,931 adding license file 'COPYING.txt' 2023-05-16T23:16:06,944 writing manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:07,215 Getting requirements to build wheel: finished with status 'done' 2023-05-16T23:16:07,224 Created temporary directory: /tmp/pip-modern-metadata-a5shymfx 2023-05-16T23:16:07,227 Preparing metadata (pyproject.toml): started 2023-05-16T23:16:07,228 Running command Preparing metadata (pyproject.toml) 2023-05-16T23:16:08,849 running dist_info 2023-05-16T23:16:08,869 creating /tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info 2023-05-16T23:16:08,875 writing /tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/PKG-INFO 2023-05-16T23:16:09,095 writing dependency_links to /tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/dependency_links.txt 2023-05-16T23:16:09,097 writing entry points to /tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/entry_points.txt 2023-05-16T23:16:09,098 writing requirements to /tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/requires.txt 2023-05-16T23:16:09,099 writing top-level names to /tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/top_level.txt 2023-05-16T23:16:09,101 writing manifest file '/tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:09,140 reading manifest file '/tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:09,143 reading manifest template 'MANIFEST.in' 2023-05-16T23:16:09,151 warning: no directories found matching 'support_files' 2023-05-16T23:16:09,156 warning: no directories found matching 'tests/test_data' 2023-05-16T23:16:09,157 no previously-included directories found matching 'docs/_build' 2023-05-16T23:16:09,158 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-16T23:16:09,159 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-05-16T23:16:09,160 warning: no previously-included files matching '.git' found anywhere in distribution 2023-05-16T23:16:09,162 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-05-16T23:16:09,163 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-05-16T23:16:09,163 adding license file 'COPYING.txt' 2023-05-16T23:16:09,172 writing manifest file '/tmp/pip-modern-metadata-a5shymfx/biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:09,174 creating '/tmp/pip-modern-metadata-a5shymfx/biom_format-2.1.15.dist-info' 2023-05-16T23:16:09,416 Preparing metadata (pyproject.toml): finished with status 'done' 2023-05-16T23:16:09,422 Source in /tmp/pip-wheel-vd35xlu6/biom-format_91a8055e1e50471fbaba96db1285b3de has version 2.1.15, which satisfies requirement biom-format==2.1.15 from https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz 2023-05-16T23:16:09,423 Removed biom-format==2.1.15 from https://files.pythonhosted.org/packages/fc/db/daf7c3872dd49acf6233873fb6f1ab7b6ca324bba25bf28fc9cf7dfd4c7b/biom-format-2.1.15.tar.gz from build tracker '/tmp/pip-build-tracker-kyp3le0g' 2023-05-16T23:16:09,428 Created temporary directory: /tmp/pip-unpack-7yulzcwo 2023-05-16T23:16:09,429 Building wheels for collected packages: biom-format 2023-05-16T23:16:09,433 Created temporary directory: /tmp/pip-wheel-jlwyfsbl 2023-05-16T23:16:09,434 Destination directory: /tmp/pip-wheel-jlwyfsbl 2023-05-16T23:16:09,439 Building wheel for biom-format (pyproject.toml): started 2023-05-16T23:16:09,440 Running command Building wheel for biom-format (pyproject.toml) 2023-05-16T23:16:11,358 running bdist_wheel 2023-05-16T23:16:11,384 running build 2023-05-16T23:16:11,384 running build_py 2023-05-16T23:16:11,393 creating build 2023-05-16T23:16:11,394 creating build/lib.linux-armv7l-cpython-39 2023-05-16T23:16:11,395 creating build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,396 copying biom/table.py -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,401 copying biom/err.py -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,404 copying biom/exception.py -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,406 copying biom/__init__.py -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,407 copying biom/parse.py -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,410 copying biom/util.py -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,413 creating build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,414 copying biom/tests/test_parse.py -> build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,418 copying biom/tests/test_table.py -> build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,424 copying biom/tests/test_err.py -> build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,426 copying biom/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,427 copying biom/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,430 copying biom/tests/long_lines.py -> build/lib.linux-armv7l-cpython-39/biom/tests 2023-05-16T23:16:11,433 creating build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,434 copying biom/cli/installation_informer.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,435 copying biom/cli/table_converter.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,438 copying biom/cli/table_subsetter.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,440 copying biom/cli/metadata_exporter.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,441 copying biom/cli/table_head.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,443 copying biom/cli/uc_processor.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,445 copying biom/cli/metadata_adder.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,447 copying biom/cli/table_validator.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,449 copying biom/cli/table_normalizer.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,451 copying biom/cli/table_ids.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,452 copying biom/cli/__init__.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,454 copying biom/cli/table_summarizer.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,456 copying biom/cli/util.py -> build/lib.linux-armv7l-cpython-39/biom/cli 2023-05-16T23:16:11,458 creating build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:11,459 copying biom/tests/test_data/__init__.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:11,461 creating build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,462 copying biom/tests/test_cli/test_table_converter.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,465 copying biom/tests/test_cli/test_add_metadata.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,466 copying biom/tests/test_cli/test_subset_table.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,468 copying biom/tests/test_cli/test_show_install_info.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,470 copying biom/tests/test_cli/test_summarize_table.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,472 copying biom/tests/test_cli/test_table_normalizer.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,473 copying biom/tests/test_cli/test_uc_processor.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,475 copying biom/tests/test_cli/test_validate_table.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,478 copying biom/tests/test_cli/__init__.py -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli 2023-05-16T23:16:11,479 running egg_info 2023-05-16T23:16:11,504 writing biom_format.egg-info/PKG-INFO 2023-05-16T23:16:11,505 writing dependency_links to biom_format.egg-info/dependency_links.txt 2023-05-16T23:16:11,507 writing entry points to biom_format.egg-info/entry_points.txt 2023-05-16T23:16:11,509 writing requirements to biom_format.egg-info/requires.txt 2023-05-16T23:16:11,510 writing top-level names to biom_format.egg-info/top_level.txt 2023-05-16T23:16:11,521 reading manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:11,528 reading manifest template 'MANIFEST.in' 2023-05-16T23:16:11,536 warning: no directories found matching 'support_files' 2023-05-16T23:16:11,541 warning: no directories found matching 'tests/test_data' 2023-05-16T23:16:11,542 no previously-included directories found matching 'docs/_build' 2023-05-16T23:16:11,544 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-16T23:16:11,545 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-05-16T23:16:11,547 warning: no previously-included files matching '.git' found anywhere in distribution 2023-05-16T23:16:11,549 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-05-16T23:16:11,551 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-05-16T23:16:11,551 adding license file 'COPYING.txt' 2023-05-16T23:16:11,563 writing manifest file 'biom_format.egg-info/SOURCES.txt' 2023-05-16T23:16:11,566 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'biom.assets' is absent from the `packages` configuration. 2023-05-16T23:16:11,566 !! 2023-05-16T23:16:11,567 ******************************************************************************** 2023-05-16T23:16:11,567 ############################ 2023-05-16T23:16:11,567 # Package would be ignored # 2023-05-16T23:16:11,567 ############################ 2023-05-16T23:16:11,567 Python recognizes 'biom.assets' as an importable package[^1], 2023-05-16T23:16:11,567 but it is absent from setuptools' `packages` configuration. 2023-05-16T23:16:11,568 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-16T23:16:11,568 package, please make sure that 'biom.assets' is explicitly added 2023-05-16T23:16:11,568 to the `packages` configuration field. 2023-05-16T23:16:11,568 Alternatively, you can also rely on setuptools' discovery methods 2023-05-16T23:16:11,568 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-16T23:16:11,568 instead of `find_packages(...)`/`find:`). 2023-05-16T23:16:11,568 You can read more about "package discovery" on setuptools documentation page: 2023-05-16T23:16:11,569 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-16T23:16:11,569 If you don't want 'biom.assets' to be distributed and are 2023-05-16T23:16:11,569 already explicitly excluding 'biom.assets' via 2023-05-16T23:16:11,569 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-16T23:16:11,569 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-16T23:16:11,569 combination with a more fine grained `package-data` configuration. 2023-05-16T23:16:11,570 You can read more about "package data files" on setuptools documentation page: 2023-05-16T23:16:11,570 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-16T23:16:11,570 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-16T23:16:11,570 even if it does not contain any `.py` files. 2023-05-16T23:16:11,570 On the other hand, currently there is no concept of package data 2023-05-16T23:16:11,571 directory, all directories are treated like packages. 2023-05-16T23:16:11,571 ******************************************************************************** 2023-05-16T23:16:11,571 !! 2023-05-16T23:16:11,571 check.warn(importable) 2023-05-16T23:16:11,571 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration. 2023-05-16T23:16:11,571 !! 2023-05-16T23:16:11,572 ******************************************************************************** 2023-05-16T23:16:11,572 ############################ 2023-05-16T23:16:11,572 # Package would be ignored # 2023-05-16T23:16:11,572 ############################ 2023-05-16T23:16:11,572 Python recognizes 'biom.tests.bench_tables' as an importable package[^1], 2023-05-16T23:16:11,572 but it is absent from setuptools' `packages` configuration. 2023-05-16T23:16:11,572 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-16T23:16:11,572 package, please make sure that 'biom.tests.bench_tables' is explicitly added 2023-05-16T23:16:11,573 to the `packages` configuration field. 2023-05-16T23:16:11,573 Alternatively, you can also rely on setuptools' discovery methods 2023-05-16T23:16:11,573 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-16T23:16:11,573 instead of `find_packages(...)`/`find:`). 2023-05-16T23:16:11,573 You can read more about "package discovery" on setuptools documentation page: 2023-05-16T23:16:11,574 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-16T23:16:11,574 If you don't want 'biom.tests.bench_tables' to be distributed and are 2023-05-16T23:16:11,574 already explicitly excluding 'biom.tests.bench_tables' via 2023-05-16T23:16:11,574 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-16T23:16:11,574 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-16T23:16:11,574 combination with a more fine grained `package-data` configuration. 2023-05-16T23:16:11,575 You can read more about "package data files" on setuptools documentation page: 2023-05-16T23:16:11,575 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-16T23:16:11,575 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-16T23:16:11,575 even if it does not contain any `.py` files. 2023-05-16T23:16:11,575 On the other hand, currently there is no concept of package data 2023-05-16T23:16:11,575 directory, all directories are treated like packages. 2023-05-16T23:16:11,576 ******************************************************************************** 2023-05-16T23:16:11,576 !! 2023-05-16T23:16:11,576 check.warn(importable) 2023-05-16T23:16:11,576 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration. 2023-05-16T23:16:11,576 !! 2023-05-16T23:16:11,576 ******************************************************************************** 2023-05-16T23:16:11,577 ############################ 2023-05-16T23:16:11,577 # Package would be ignored # 2023-05-16T23:16:11,577 ############################ 2023-05-16T23:16:11,577 Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1], 2023-05-16T23:16:11,577 but it is absent from setuptools' `packages` configuration. 2023-05-16T23:16:11,577 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-16T23:16:11,577 package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added 2023-05-16T23:16:11,577 to the `packages` configuration field. 2023-05-16T23:16:11,578 Alternatively, you can also rely on setuptools' discovery methods 2023-05-16T23:16:11,578 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-16T23:16:11,578 instead of `find_packages(...)`/`find:`). 2023-05-16T23:16:11,578 You can read more about "package discovery" on setuptools documentation page: 2023-05-16T23:16:11,578 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-16T23:16:11,579 If you don't want 'biom.tests.test_cli.test_data' to be distributed and are 2023-05-16T23:16:11,579 already explicitly excluding 'biom.tests.test_cli.test_data' via 2023-05-16T23:16:11,579 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-16T23:16:11,579 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-16T23:16:11,579 combination with a more fine grained `package-data` configuration. 2023-05-16T23:16:11,579 You can read more about "package data files" on setuptools documentation page: 2023-05-16T23:16:11,579 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-16T23:16:11,580 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-16T23:16:11,580 even if it does not contain any `.py` files. 2023-05-16T23:16:11,580 On the other hand, currently there is no concept of package data 2023-05-16T23:16:11,580 directory, all directories are treated like packages. 2023-05-16T23:16:11,580 ******************************************************************************** 2023-05-16T23:16:11,580 !! 2023-05-16T23:16:11,581 check.warn(importable) 2023-05-16T23:16:11,586 copying biom/_filter.pyx -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,588 copying biom/_subsample.pyx -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,590 copying biom/_transform.pyx -> build/lib.linux-armv7l-cpython-39/biom 2023-05-16T23:16:11,592 creating build/lib.linux-armv7l-cpython-39/biom/assets 2023-05-16T23:16:11,593 copying biom/assets/exercise_api.py -> build/lib.linux-armv7l-cpython-39/biom/assets 2023-05-16T23:16:11,595 copying biom/assets/exercise_cli.sh -> build/lib.linux-armv7l-cpython-39/biom/assets 2023-05-16T23:16:11,597 creating build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:11,598 copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:11,604 copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:11,615 copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:11,656 copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:11,670 copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,027 copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,093 copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,097 copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,105 copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,113 copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,122 copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,163 copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,193 copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,196 copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,203 copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,206 copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,214 copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,220 copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,229 copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,232 copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,238 copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,241 copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,248 copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,251 copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,261 copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,264 copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,272 copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,279 copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,290 copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,339 copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,378 copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,380 copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,384 copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,387 copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,391 copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,399 copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,404 copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,406 copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,409 copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,412 copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,416 copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,418 copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,422 copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,424 copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,428 copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,430 copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,433 copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,436 copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,439 copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,442 copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,449 copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,452 copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,461 copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,469 copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,482 copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,484 copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,488 copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,490 copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,494 copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,497 copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,501 copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,503 copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,506 copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,507 copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,510 copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,512 copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,515 copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,517 copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,520 copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,522 copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,524 copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,526 copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,529 copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,532 copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,541 copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,543 copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,553 copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,556 copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,566 copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,568 copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,571 copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,573 copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,577 copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,579 copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,583 copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,584 copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,587 copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,589 copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,592 copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,594 copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,597 copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,599 copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,601 copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,603 copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,606 copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,608 copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables 2023-05-16T23:16:12,611 copying biom/tests/test_data/bad_table.txt -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,612 copying biom/tests/test_data/bad_table.txt.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,614 copying biom/tests/test_data/empty.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,617 copying biom/tests/test_data/no-contents.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,619 copying biom/tests/test_data/test.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,622 copying biom/tests/test_data/test.json -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,624 copying biom/tests/test_data/test.json.gz -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,626 copying biom/tests/test_data/test_grp_metadata.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_data 2023-05-16T23:16:12,629 creating build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data 2023-05-16T23:16:12,629 copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data 2023-05-16T23:16:12,632 copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data 2023-05-16T23:16:12,634 copying biom/tests/test_cli/test_data/test.biom -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data 2023-05-16T23:16:12,637 copying biom/tests/test_cli/test_data/test.json -> build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data 2023-05-16T23:16:12,642 running build_ext 2023-05-16T23:16:12,647 building 'biom._filter' extension 2023-05-16T23:16:12,648 creating build/temp.linux-armv7l-cpython-39 2023-05-16T23:16:12,648 creating build/temp.linux-armv7l-cpython-39/biom 2023-05-16T23:16:12,649 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c biom/_filter.c -o build/temp.linux-armv7l-cpython-39/biom/_filter.o 2023-05-16T23:16:12,972 In file included from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-05-16T23:16:12,973 from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-05-16T23:16:12,973 from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-05-16T23:16:12,973 from biom/_filter.c:768: 2023-05-16T23:16:12,973 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-05-16T23:16:12,973 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-05-16T23:16:12,973 | ^~~~~~~ 2023-05-16T23:16:19,377 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/biom/_filter.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/biom/_filter.cpython-39-arm-linux-gnueabihf.so 2023-05-16T23:16:19,495 building 'biom._transform' extension 2023-05-16T23:16:19,496 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c biom/_transform.c -o build/temp.linux-armv7l-cpython-39/biom/_transform.o 2023-05-16T23:16:19,799 In file included from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-05-16T23:16:19,799 from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-05-16T23:16:19,799 from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-05-16T23:16:19,799 from biom/_transform.c:768: 2023-05-16T23:16:19,799 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-05-16T23:16:19,799 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-05-16T23:16:19,800 | ^~~~~~~ 2023-05-16T23:16:22,149 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/biom/_transform.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/biom/_transform.cpython-39-arm-linux-gnueabihf.so 2023-05-16T23:16:22,256 building 'biom._subsample' extension 2023-05-16T23:16:22,256 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c biom/_subsample.c -o build/temp.linux-armv7l-cpython-39/biom/_subsample.o 2023-05-16T23:16:22,560 In file included from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-05-16T23:16:22,560 from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-05-16T23:16:22,560 from /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-05-16T23:16:22,560 from biom/_subsample.c:768: 2023-05-16T23:16:22,560 /tmp/pip-build-env-dbr00yd8/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-05-16T23:16:22,560 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-05-16T23:16:22,560 | ^~~~~~~ 2023-05-16T23:16:26,924 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/biom/_subsample.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/biom/_subsample.cpython-39-arm-linux-gnueabihf.so 2023-05-16T23:16:27,052 installing to build/bdist.linux-armv7l/wheel 2023-05-16T23:16:27,053 running install 2023-05-16T23:16:27,078 running install_lib 2023-05-16T23:16:27,087 creating build/bdist.linux-armv7l 2023-05-16T23:16:27,088 creating build/bdist.linux-armv7l/wheel 2023-05-16T23:16:27,089 creating build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,090 copying build/lib.linux-armv7l-cpython-39/biom/table.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,097 copying build/lib.linux-armv7l-cpython-39/biom/_subsample.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,098 copying build/lib.linux-armv7l-cpython-39/biom/_transform.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,100 copying build/lib.linux-armv7l-cpython-39/biom/err.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,102 copying build/lib.linux-armv7l-cpython-39/biom/exception.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,104 copying build/lib.linux-armv7l-cpython-39/biom/_filter.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:27,115 creating build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:27,118 creating build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,119 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,122 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,125 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,127 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,136 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,146 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,149 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,163 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,171 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,172 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,174 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,177 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,179 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,182 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,184 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,187 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,190 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,197 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,199 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,202 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,209 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,212 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,214 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,220 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,544 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,546 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,556 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,563 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,577 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,584 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,588 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,590 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,594 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,599 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,603 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,608 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,637 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,641 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,643 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,657 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,662 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,665 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,669 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,673 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,675 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,678 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,681 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,685 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,690 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,693 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,697 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,707 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,711 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,714 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,718 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,727 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,729 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,758 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,760 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,808 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,811 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,814 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,817 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,825 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,827 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,829 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,835 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,838 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,841 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,848 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,854 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,856 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,859 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,862 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,864 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,902 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,948 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,956 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,958 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:27,962 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,003 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,072 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,074 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,081 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,083 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,090 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,094 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,095 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,098 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,100 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,102 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,104 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,107 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,121 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,131 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,136 copying build/lib.linux-armv7l-cpython-39/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-05-16T23:16:28,139 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_parse.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:28,142 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_table.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:28,148 creating build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,149 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/no-contents.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,150 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/bad_table.txt.gz -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,152 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/test.json -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,154 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/test_grp_metadata.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,158 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/bad_table.txt -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,159 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/empty.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,162 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,164 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/test.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,167 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_data/test.json.gz -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-05-16T23:16:28,169 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_err.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:28,171 copying build/lib.linux-armv7l-cpython-39/biom/tests/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:28,173 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_util.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:28,176 copying build/lib.linux-armv7l-cpython-39/biom/tests/long_lines.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-05-16T23:16:28,178 creating build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,180 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_table_converter.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,182 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_add_metadata.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,185 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_subset_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,187 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_show_install_info.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,189 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_summarize_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,192 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_table_normalizer.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,194 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_uc_processor.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,197 creating build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-16T23:16:28,198 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-16T23:16:28,200 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data/test.json -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-16T23:16:28,202 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-16T23:16:28,204 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_data/test.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-05-16T23:16:28,207 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/test_validate_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,210 copying build/lib.linux-armv7l-cpython-39/biom/tests/test_cli/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-05-16T23:16:28,212 creating build/bdist.linux-armv7l/wheel/biom/assets 2023-05-16T23:16:28,213 copying build/lib.linux-armv7l-cpython-39/biom/assets/exercise_api.py -> build/bdist.linux-armv7l/wheel/biom/assets 2023-05-16T23:16:28,215 copying build/lib.linux-armv7l-cpython-39/biom/assets/exercise_cli.sh -> build/bdist.linux-armv7l/wheel/biom/assets 2023-05-16T23:16:28,217 copying build/lib.linux-armv7l-cpython-39/biom/_subsample.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:28,224 creating build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,225 copying build/lib.linux-armv7l-cpython-39/biom/cli/installation_informer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,227 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_converter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,230 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_subsetter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,232 copying build/lib.linux-armv7l-cpython-39/biom/cli/metadata_exporter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,233 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_head.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,236 copying build/lib.linux-armv7l-cpython-39/biom/cli/uc_processor.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,237 copying build/lib.linux-armv7l-cpython-39/biom/cli/metadata_adder.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,239 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_validator.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,242 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_normalizer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,243 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_ids.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,245 copying build/lib.linux-armv7l-cpython-39/biom/cli/__init__.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,247 copying build/lib.linux-armv7l-cpython-39/biom/cli/table_summarizer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,249 copying build/lib.linux-armv7l-cpython-39/biom/cli/util.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-05-16T23:16:28,251 copying build/lib.linux-armv7l-cpython-39/biom/_transform.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:28,256 copying build/lib.linux-armv7l-cpython-39/biom/__init__.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:28,257 copying build/lib.linux-armv7l-cpython-39/biom/parse.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:28,260 copying build/lib.linux-armv7l-cpython-39/biom/util.py -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:28,262 copying build/lib.linux-armv7l-cpython-39/biom/_filter.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-05-16T23:16:28,264 running install_egg_info 2023-05-16T23:16:28,278 Copying biom_format.egg-info to build/bdist.linux-armv7l/wheel/biom_format-2.1.15-py3.9.egg-info 2023-05-16T23:16:28,290 running install_scripts 2023-05-16T23:16:28,340 creating build/bdist.linux-armv7l/wheel/biom_format-2.1.15.dist-info/WHEEL 2023-05-16T23:16:28,343 creating '/tmp/pip-wheel-jlwyfsbl/.tmp-i85g2dh6/biom_format-2.1.15-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-16T23:16:28,346 adding 'biom/__init__.py' 2023-05-16T23:16:28,433 adding 'biom/_filter.cpython-39-arm-linux-gnueabihf.so' 2023-05-16T23:16:28,437 adding 'biom/_filter.pyx' 2023-05-16T23:16:28,491 adding 'biom/_subsample.cpython-39-arm-linux-gnueabihf.so' 2023-05-16T23:16:28,494 adding 'biom/_subsample.pyx' 2023-05-16T23:16:28,528 adding 'biom/_transform.cpython-39-arm-linux-gnueabihf.so' 2023-05-16T23:16:28,530 adding 'biom/_transform.pyx' 2023-05-16T23:16:28,532 adding 'biom/err.py' 2023-05-16T23:16:28,534 adding 'biom/exception.py' 2023-05-16T23:16:28,537 adding 'biom/parse.py' 2023-05-16T23:16:28,559 adding 'biom/table.py' 2023-05-16T23:16:28,563 adding 'biom/util.py' 2023-05-16T23:16:28,565 adding 'biom/assets/exercise_api.py' 2023-05-16T23:16:28,566 adding 'biom/assets/exercise_cli.sh' 2023-05-16T23:16:28,568 adding 'biom/cli/__init__.py' 2023-05-16T23:16:28,570 adding 'biom/cli/installation_informer.py' 2023-05-16T23:16:28,571 adding 'biom/cli/metadata_adder.py' 2023-05-16T23:16:28,572 adding 'biom/cli/metadata_exporter.py' 2023-05-16T23:16:28,574 adding 'biom/cli/table_converter.py' 2023-05-16T23:16:28,575 adding 'biom/cli/table_head.py' 2023-05-16T23:16:28,577 adding 'biom/cli/table_ids.py' 2023-05-16T23:16:28,578 adding 'biom/cli/table_normalizer.py' 2023-05-16T23:16:28,580 adding 'biom/cli/table_subsetter.py' 2023-05-16T23:16:28,581 adding 'biom/cli/table_summarizer.py' 2023-05-16T23:16:28,584 adding 'biom/cli/table_validator.py' 2023-05-16T23:16:28,585 adding 'biom/cli/uc_processor.py' 2023-05-16T23:16:28,586 adding 'biom/cli/util.py' 2023-05-16T23:16:28,588 adding 'biom/tests/__init__.py' 2023-05-16T23:16:28,589 adding 'biom/tests/long_lines.py' 2023-05-16T23:16:28,591 adding 'biom/tests/test_err.py' 2023-05-16T23:16:28,595 adding 'biom/tests/test_parse.py' 2023-05-16T23:16:28,610 adding 'biom/tests/test_table.py' 2023-05-16T23:16:28,614 adding 'biom/tests/test_util.py' 2023-05-16T23:16:28,626 adding 'biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz' 2023-05-16T23:16:28,731 adding 'biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:28,857 adding 'biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz' 2023-05-16T23:16:28,993 adding 'biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:29,555 adding 'biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz' 2023-05-16T23:16:30,042 adding 'biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:30,076 adding 'biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz' 2023-05-16T23:16:30,135 adding 'biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:30,166 adding 'biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz' 2023-05-16T23:16:30,241 adding 'biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:30,495 adding 'biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz' 2023-05-16T23:16:30,762 adding 'biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:30,776 adding 'biom/tests/bench_tables/10000x100x0.001_bench.biom.gz' 2023-05-16T23:16:30,826 adding 'biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:30,833 adding 'biom/tests/bench_tables/10000x100x0.010_bench.biom.gz' 2023-05-16T23:16:30,884 adding 'biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:30,905 adding 'biom/tests/bench_tables/10000x100x0.100_bench.biom.gz' 2023-05-16T23:16:30,970 adding 'biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:30,975 adding 'biom/tests/bench_tables/10000x10x0.001_bench.biom.gz' 2023-05-16T23:16:31,024 adding 'biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:31,028 adding 'biom/tests/bench_tables/10000x10x0.010_bench.biom.gz' 2023-05-16T23:16:31,077 adding 'biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:31,083 adding 'biom/tests/bench_tables/10000x10x0.100_bench.biom.gz' 2023-05-16T23:16:31,133 adding 'biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:31,140 adding 'biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz' 2023-05-16T23:16:31,196 adding 'biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:31,236 adding 'biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz' 2023-05-16T23:16:31,316 adding 'biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:31,620 adding 'biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz' 2023-05-16T23:16:31,962 adding 'biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:31,980 adding 'biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz' 2023-05-16T23:16:31,990 adding 'biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:31,993 adding 'biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz' 2023-05-16T23:16:32,003 adding 'biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,013 adding 'biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz' 2023-05-16T23:16:32,026 adding 'biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,029 adding 'biom/tests/bench_tables/1000x100x0.001_bench.biom.gz' 2023-05-16T23:16:32,035 adding 'biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,037 adding 'biom/tests/bench_tables/1000x100x0.010_bench.biom.gz' 2023-05-16T23:16:32,044 adding 'biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,048 adding 'biom/tests/bench_tables/1000x100x0.100_bench.biom.gz' 2023-05-16T23:16:32,055 adding 'biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,057 adding 'biom/tests/bench_tables/1000x10x0.001_bench.biom.gz' 2023-05-16T23:16:32,063 adding 'biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,065 adding 'biom/tests/bench_tables/1000x10x0.010_bench.biom.gz' 2023-05-16T23:16:32,071 adding 'biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,074 adding 'biom/tests/bench_tables/1000x10x0.100_bench.biom.gz' 2023-05-16T23:16:32,080 adding 'biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,083 adding 'biom/tests/bench_tables/100x10000x0.001_bench.biom.gz' 2023-05-16T23:16:32,132 adding 'biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,139 adding 'biom/tests/bench_tables/100x10000x0.010_bench.biom.gz' 2023-05-16T23:16:32,190 adding 'biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,223 adding 'biom/tests/bench_tables/100x10000x0.100_bench.biom.gz' 2023-05-16T23:16:32,299 adding 'biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,304 adding 'biom/tests/bench_tables/100x1000x0.001_bench.biom.gz' 2023-05-16T23:16:32,310 adding 'biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,312 adding 'biom/tests/bench_tables/100x1000x0.010_bench.biom.gz' 2023-05-16T23:16:32,318 adding 'biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,322 adding 'biom/tests/bench_tables/100x1000x0.100_bench.biom.gz' 2023-05-16T23:16:32,330 adding 'biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,332 adding 'biom/tests/bench_tables/100x100x0.001_bench.biom.gz' 2023-05-16T23:16:32,335 adding 'biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,336 adding 'biom/tests/bench_tables/100x100x0.010_bench.biom.gz' 2023-05-16T23:16:32,339 adding 'biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,341 adding 'biom/tests/bench_tables/100x100x0.100_bench.biom.gz' 2023-05-16T23:16:32,344 adding 'biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,345 adding 'biom/tests/bench_tables/100x10x0.001_bench.biom.gz' 2023-05-16T23:16:32,348 adding 'biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,349 adding 'biom/tests/bench_tables/100x10x0.010_bench.biom.gz' 2023-05-16T23:16:32,352 adding 'biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,353 adding 'biom/tests/bench_tables/100x10x0.100_bench.biom.gz' 2023-05-16T23:16:32,356 adding 'biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,358 adding 'biom/tests/bench_tables/10x10000x0.001_bench.biom.gz' 2023-05-16T23:16:32,407 adding 'biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,411 adding 'biom/tests/bench_tables/10x10000x0.010_bench.biom.gz' 2023-05-16T23:16:32,460 adding 'biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,466 adding 'biom/tests/bench_tables/10x10000x0.100_bench.biom.gz' 2023-05-16T23:16:32,517 adding 'biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,520 adding 'biom/tests/bench_tables/10x1000x0.001_bench.biom.gz' 2023-05-16T23:16:32,526 adding 'biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,528 adding 'biom/tests/bench_tables/10x1000x0.010_bench.biom.gz' 2023-05-16T23:16:32,534 adding 'biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,536 adding 'biom/tests/bench_tables/10x1000x0.100_bench.biom.gz' 2023-05-16T23:16:32,541 adding 'biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,543 adding 'biom/tests/bench_tables/10x100x0.001_bench.biom.gz' 2023-05-16T23:16:32,546 adding 'biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,547 adding 'biom/tests/bench_tables/10x100x0.010_bench.biom.gz' 2023-05-16T23:16:32,550 adding 'biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,551 adding 'biom/tests/bench_tables/10x100x0.100_bench.biom.gz' 2023-05-16T23:16:32,554 adding 'biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,555 adding 'biom/tests/bench_tables/10x10x0.001_bench.biom.gz' 2023-05-16T23:16:32,557 adding 'biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz' 2023-05-16T23:16:32,559 adding 'biom/tests/bench_tables/10x10x0.010_bench.biom.gz' 2023-05-16T23:16:32,561 adding 'biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz' 2023-05-16T23:16:32,563 adding 'biom/tests/bench_tables/10x10x0.100_bench.biom.gz' 2023-05-16T23:16:32,565 adding 'biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz' 2023-05-16T23:16:32,567 adding 'biom/tests/test_cli/__init__.py' 2023-05-16T23:16:32,568 adding 'biom/tests/test_cli/test_add_metadata.py' 2023-05-16T23:16:32,570 adding 'biom/tests/test_cli/test_show_install_info.py' 2023-05-16T23:16:32,571 adding 'biom/tests/test_cli/test_subset_table.py' 2023-05-16T23:16:32,573 adding 'biom/tests/test_cli/test_summarize_table.py' 2023-05-16T23:16:32,575 adding 'biom/tests/test_cli/test_table_converter.py' 2023-05-16T23:16:32,576 adding 'biom/tests/test_cli/test_table_normalizer.py' 2023-05-16T23:16:32,577 adding 'biom/tests/test_cli/test_uc_processor.py' 2023-05-16T23:16:32,579 adding 'biom/tests/test_cli/test_validate_table.py' 2023-05-16T23:16:32,581 adding 'biom/tests/test_cli/test_data/json_obs_collapsed.biom' 2023-05-16T23:16:32,583 adding 'biom/tests/test_cli/test_data/json_sample_collapsed.biom' 2023-05-16T23:16:32,585 adding 'biom/tests/test_cli/test_data/test.biom' 2023-05-16T23:16:32,587 adding 'biom/tests/test_cli/test_data/test.json' 2023-05-16T23:16:32,589 adding 'biom/tests/test_data/__init__.py' 2023-05-16T23:16:32,590 adding 'biom/tests/test_data/bad_table.txt' 2023-05-16T23:16:32,591 adding 'biom/tests/test_data/bad_table.txt.gz' 2023-05-16T23:16:32,593 adding 'biom/tests/test_data/empty.biom' 2023-05-16T23:16:32,594 adding 'biom/tests/test_data/no-contents.biom' 2023-05-16T23:16:32,597 adding 'biom/tests/test_data/test.biom' 2023-05-16T23:16:32,599 adding 'biom/tests/test_data/test.json' 2023-05-16T23:16:32,600 adding 'biom/tests/test_data/test.json.gz' 2023-05-16T23:16:32,602 adding 'biom/tests/test_data/test_grp_metadata.biom' 2023-05-16T23:16:32,605 adding 'biom_format-2.1.15.dist-info/COPYING.txt' 2023-05-16T23:16:32,606 adding 'biom_format-2.1.15.dist-info/METADATA' 2023-05-16T23:16:32,607 adding 'biom_format-2.1.15.dist-info/WHEEL' 2023-05-16T23:16:32,608 adding 'biom_format-2.1.15.dist-info/entry_points.txt' 2023-05-16T23:16:32,608 adding 'biom_format-2.1.15.dist-info/top_level.txt' 2023-05-16T23:16:32,611 adding 'biom_format-2.1.15.dist-info/RECORD' 2023-05-16T23:16:32,739 removing build/bdist.linux-armv7l/wheel 2023-05-16T23:16:32,973 Building wheel for biom-format (pyproject.toml): finished with status 'done' 2023-05-16T23:16:33,224 Created wheel for biom-format: filename=biom_format-2.1.15-cp39-cp39-linux_armv7l.whl size=11995177 sha256=c46bbbc0b12de30afe809971d36e1c6e15ab0145640243067ab25fd0ac7f371e 2023-05-16T23:16:33,225 Stored in directory: /tmp/pip-ephem-wheel-cache-6_smwnr_/wheels/d4/3d/9d/a5ed4b92656726b38ec2d28a612df62ee6e471007e972e0fd9 2023-05-16T23:16:33,245 Successfully built biom-format 2023-05-16T23:16:33,517 Removed build tracker: '/tmp/pip-build-tracker-kyp3le0g'