2023-05-16T23:13:08,753 Created temporary directory: /tmp/pip-build-tracker-b7l3o7k4
2023-05-16T23:13:08,754 Initialized build tracking at /tmp/pip-build-tracker-b7l3o7k4
2023-05-16T23:13:08,755 Created build tracker: /tmp/pip-build-tracker-b7l3o7k4
2023-05-16T23:13:08,755 Entered build tracker: /tmp/pip-build-tracker-b7l3o7k4
2023-05-16T23:13:08,755 Created temporary directory: /tmp/pip-wheel-vakbq86i
2023-05-16T23:13:08,759 Created temporary directory: /tmp/pip-ephem-wheel-cache-8xq77kn_
2023-05-16T23:13:08,784 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-05-16T23:13:08,787 2 location(s) to search for versions of moleculekit:
2023-05-16T23:13:08,787 * https://pypi.org/simple/moleculekit/
2023-05-16T23:13:08,787 * https://www.piwheels.org/simple/moleculekit/
2023-05-16T23:13:08,788 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-05-16T23:13:08,788 Getting page https://pypi.org/simple/moleculekit/
2023-05-16T23:13:08,790 Found index url https://pypi.org/simple/
2023-05-16T23:13:08,842 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-05-16T23:13:08,877   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,878   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-05-16T23:13:08,878   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,878   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-05-16T23:13:08,878   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,879   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-05-16T23:13:08,879   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,879   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-05-16T23:13:08,879   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,880   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-05-16T23:13:08,880   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,880   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-05-16T23:13:08,880   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,881   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-05-16T23:13:08,881   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,881   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-05-16T23:13:08,881   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,882   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-05-16T23:13:08,882   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,882   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-05-16T23:13:08,882   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,883   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-05-16T23:13:08,883   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,883   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-05-16T23:13:08,883   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,884   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-05-16T23:13:08,884   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,884   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-05-16T23:13:08,884   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,885   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-05-16T23:13:08,885   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,885   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-05-16T23:13:08,885   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,885   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-05-16T23:13:08,886   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,886   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-05-16T23:13:08,886   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,886   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-05-16T23:13:08,887   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,887   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-05-16T23:13:08,887   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,887   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-05-16T23:13:08,888   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,888   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-05-16T23:13:08,888   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,888   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-05-16T23:13:08,889   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,889   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-05-16T23:13:08,889   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,889   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-05-16T23:13:08,889   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,890   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-05-16T23:13:08,890   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,890   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-05-16T23:13:08,890   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,891   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-05-16T23:13:08,891   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,891   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-05-16T23:13:08,891   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,892   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-05-16T23:13:08,892   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,892   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-05-16T23:13:08,892   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,892   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-05-16T23:13:08,893   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,893   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
2023-05-16T23:13:08,893   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0e/6f/a11697b46e26552b60513aad11c1862ea314d1628ed83b3d1ea7cb552d51/moleculekit-0.3.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,893   Found link https://files.pythonhosted.org/packages/13/f9/af3d7677c2eb61bb310ddad301ab47b9c1db2f923b0efad9ce605112aafb/moleculekit-0.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.1
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2023-05-16T23:13:08,894   Found link https://files.pythonhosted.org/packages/0d/3f/7743a3ec8c6ed58c5f0c12bf19654ba6275d473044861d9479ff346f8859/moleculekit-0.3.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.2
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2023-05-16T23:13:08,894   Found link https://files.pythonhosted.org/packages/a1/bf/2b3762bf7738dd1850a06eb6330cd8d17c49acaa272d43fc80c7c9c44a04/moleculekit-0.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.3
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2023-05-16T23:13:08,895   Found link https://files.pythonhosted.org/packages/7e/e0/d4abeaf42102abf8d132168518d29b8fec430608a3bb484a3254b63e9d37/moleculekit-0.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.4
2023-05-16T23:13:08,895   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/94/5a/b800d3737fc73a0197bf983ce179f8bedaa71a331029a733aefedc2a8a0c/moleculekit-0.3.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,895   Found link https://files.pythonhosted.org/packages/18/8a/a376ec94bd0c414528774a510846e3a34afec6356cda3d31d3a044a74a15/moleculekit-0.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.5
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2023-05-16T23:13:08,897   Found link https://files.pythonhosted.org/packages/67/47/5f9440683e69c1612d117c957044f665b4e025bffab93251e31444529fa6/moleculekit-0.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.0
2023-05-16T23:13:08,897   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/45/48/d6f7e3ff07d4e04aced25dc1e28790e8d1d2aa95ccd0db0f0043e354f0de/moleculekit-0.4.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-05-16T23:13:08,898   Found link https://files.pythonhosted.org/packages/5c/8c/e37b37f907a6d009fbc458764ab561b9fe758cf0e0d349b7d19908820ab1/moleculekit-0.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.2
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2023-05-16T23:13:08,898   Found link https://files.pythonhosted.org/packages/40/e2/a9ce14fedc2bf7c9b1678a21e860878b5ea4f37b9820ef299ccc70634094/moleculekit-0.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.3
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2023-05-16T23:13:08,899   Found link https://files.pythonhosted.org/packages/8f/22/90193aaf5014419463425cf48b2857ffb08d1a85df3af6407f370ea39358/moleculekit-0.4.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.6
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2023-05-16T23:13:08,901   Found link https://files.pythonhosted.org/packages/b1/30/da12019468d39b9fc72b300f6bc0cbc4045ad8ccc1b8f25aa9fb7dced289/moleculekit-0.5.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.4
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2023-05-16T23:13:08,902   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3a/53/7ae8cc33411c0f5f83d245abfeabfd81ed123a3cfbf8a500ec4d96648275/moleculekit-0.5.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2023-05-16T23:13:08,910   Found link https://files.pythonhosted.org/packages/5c/b2/944d529319db190e13234dd2337bff23b7a7c3c1a98b2a95eb08fc802530/moleculekit-0.9.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.7
2023-05-16T23:13:08,910   Found link https://files.pythonhosted.org/packages/42/0a/fbfa3d5c838ad716fdcb9b5ad55bddb6dccd74c5c281ac171be93b0f58e2/moleculekit-0.9.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.8
2023-05-16T23:13:08,911   Found link https://files.pythonhosted.org/packages/15/e0/93b4cc5e997a9e4e01fd39f00548f04e3f068961abba30f82fc04aa828ac/moleculekit-0.9.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.9
2023-05-16T23:13:08,911   Found link https://files.pythonhosted.org/packages/7f/58/2f04c5387c3c23e5c46f71741f7655c380b01c6f88aad7b5e945943c3fd1/moleculekit-0.9.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.12
2023-05-16T23:13:08,911   Found link https://files.pythonhosted.org/packages/b5/7c/fde4b7b8c9cd6683036e87727f341a0c9de5dae09f324dfa1bc2aa2a6de0/moleculekit-0.9.13.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.13
2023-05-16T23:13:08,911   Found link https://files.pythonhosted.org/packages/8e/f7/39a1290893da55d759e629ea6d9e2509fe6c3a06538d3f80cca590859647/moleculekit-0.9.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.14
2023-05-16T23:13:08,912   Found link https://files.pythonhosted.org/packages/02/6e/108b002ecb68c789d690492a02ced311cea625fdd642348e5cd75bd25fdb/moleculekit-0.9.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.15
2023-05-16T23:13:08,912   Found link https://files.pythonhosted.org/packages/62/51/f195a9d66dab99b8f6bd30fe5f65f63c65e65ded97c8fd20bf0cda822ee1/moleculekit-0.10.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.10.0
2023-05-16T23:13:08,912   Found link https://files.pythonhosted.org/packages/19/73/98bfd38e7d5823dc1d21ca3557d9f599b09926d252b22e215688677fe1eb/moleculekit-1.0.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.0
2023-05-16T23:13:08,912   Found link https://files.pythonhosted.org/packages/fc/d7/f3aa2dd40f165c1b67401587414deb33e80764835dfe2abb16b9b1d167bf/moleculekit-1.0.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.1
2023-05-16T23:13:08,913   Found link https://files.pythonhosted.org/packages/19/54/5ec72761331cfeea3e48a65f0dc30f7c21ec586f6d2b904339c262abafd8/moleculekit-1.0.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.2
2023-05-16T23:13:08,913   Found link https://files.pythonhosted.org/packages/f9/12/d8febc3aa79b72ffa0ea8efb978370f58db848fba030df47ae546bccb298/moleculekit-1.0.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.3
2023-05-16T23:13:08,913   Found link https://files.pythonhosted.org/packages/07/ab/e6c8a654329cb5fc7cf2d91d47934a6f53ec8b34276e96128f9961147a6a/moleculekit-1.0.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.4
2023-05-16T23:13:08,914   Found link https://files.pythonhosted.org/packages/d3/02/1e965b08593af843878d5bc3f7cc49cf61d4c9ca3a1e07e796923fbdb65e/moleculekit-1.0.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.5
2023-05-16T23:13:08,914   Found link https://files.pythonhosted.org/packages/28/2f/61d6e171e7b0309a94b3920b2743e5b6990d24a4870a5b1caf39f0e34338/moleculekit-1.0.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.6
2023-05-16T23:13:08,914   Found link https://files.pythonhosted.org/packages/6d/1e/bbd2d882b353e673f44897179ab0b6e76df9c2a657d25d47090dbdce76d3/moleculekit-1.0.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.7
2023-05-16T23:13:08,914   Found link https://files.pythonhosted.org/packages/61/45/acbe2272378c87f0796b1ebcba0673a13acc5ed87eb0d29fa16e1bfe54cf/moleculekit-1.0.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.8
2023-05-16T23:13:08,915   Found link https://files.pythonhosted.org/packages/72/48/3df4bcf3a3e5ca9c0e05e5486c0a7da3b7d6b3ff49830d473b6e72f02443/moleculekit-1.0.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.9
2023-05-16T23:13:08,915   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
2023-05-16T23:13:08,915   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
2023-05-16T23:13:08,916   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2023-05-16T23:13:08,916   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
2023-05-16T23:13:08,916   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2023-05-16T23:13:08,916   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2023-05-16T23:13:08,917   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-05-16T23:13:08,917   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-05-16T23:13:08,917   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-05-16T23:13:08,917   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2023-05-16T23:13:08,918   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2023-05-16T23:13:08,918   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2023-05-16T23:13:08,918   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2023-05-16T23:13:08,918   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-05-16T23:13:08,919   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-05-16T23:13:08,919   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-05-16T23:13:08,919   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2023-05-16T23:13:08,919   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
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2023-05-16T23:13:08,920   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
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2023-05-16T23:13:08,920   Found link https://files.pythonhosted.org/packages/30/3d/7f0577f2f4fd87df9160c6c80c49fe7d025f40b9f25c6b6d9ed0bcd2341f/moleculekit-1.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.7
2023-05-16T23:13:08,921   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2023-05-16T23:13:08,921   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2023-05-16T23:13:08,921   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2023-05-16T23:13:08,921   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
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2023-05-16T23:13:08,922   Found link https://files.pythonhosted.org/packages/f9/12/68450058da1b4f39328ce41f22cfb5a38717147b3e624cb76b225318dd96/moleculekit-1.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.3
2023-05-16T23:13:08,922   Found link https://files.pythonhosted.org/packages/a1/9c/61a877e38393372a16746096dc836e3a24d0fe31240644258396f6ec1dd5/moleculekit-1.4.5-1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.5-1
2023-05-16T23:13:08,923   Found link https://files.pythonhosted.org/packages/65/2b/f8fbac2b196d899066e4d26b78e62adc1f2356734b3de63da153e9b18e44/moleculekit-1.4.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.6
2023-05-16T23:13:08,923   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
2023-05-16T23:13:08,924   Found link https://files.pythonhosted.org/packages/91/bd/4e692bc271e6a957732a20347e43f0388e12ab60df6717a178b628f18fce/moleculekit-1.4.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.8
2023-05-16T23:13:08,925   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2023-05-16T23:13:08,925   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2023-05-16T23:13:08,926   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
2023-05-16T23:13:08,926   Found link https://files.pythonhosted.org/packages/3d/18/e249854f20e449b9890eca08ef37ccdb87f719b6ac0db8e9d2ca9c4eb890/moleculekit-1.5.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.2
2023-05-16T23:13:08,927   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2023-05-16T23:13:08,927   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2023-05-16T23:13:08,928   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2023-05-16T23:13:08,929   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2023-05-16T23:13:08,929   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
2023-05-16T23:13:08,930   Found link https://files.pythonhosted.org/packages/5e/4a/8e20ee9556cfcdc8c51aac44a054b76db1b9abf8c83124f51521397f7673/moleculekit-1.5.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.8
2023-05-16T23:13:08,930   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
2023-05-16T23:13:08,931   Found link https://files.pythonhosted.org/packages/c2/66/b802cbaa73639d3fb24d7aca0a21b932bd6b781103c3aa0662fd27dd64e0/moleculekit-1.6.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.1
2023-05-16T23:13:08,931   Found link https://files.pythonhosted.org/packages/01/31/1debf4b7c89e0060dc1f7d19ab348e627b9183890a8e443c1ee54ee3bd6c/moleculekit-1.6.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.4
2023-05-16T23:13:08,932   Found link https://files.pythonhosted.org/packages/d6/3a/77427acaba2c2b4670a4b94ce5cd161b60ac547e812a6337374265f3272d/moleculekit-1.6.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.5
2023-05-16T23:13:08,932   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
2023-05-16T23:13:08,933   Found link https://files.pythonhosted.org/packages/b0/eb/47f199ab494f4a3929e1265222e24dcfce4dc2dde54923d1be8e513bf765/moleculekit-1.6.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.7
2023-05-16T23:13:08,933   Found link https://files.pythonhosted.org/packages/02/62/8710bf8c331f6c5d3320bcd99ce1f53fd72c8ed39767e69fe09127926c58/moleculekit-1.6.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.8
2023-05-16T23:13:08,934   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
2023-05-16T23:13:08,934 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-05-16T23:13:08,935 Getting page https://www.piwheels.org/simple/moleculekit/
2023-05-16T23:13:08,936 Found index url https://www.piwheels.org/simple/
2023-05-16T23:13:09,095 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
2023-05-16T23:13:09,144   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.6.8-cp39-cp39-linux_armv7l.whl#sha256=96268f432c913308f919be78bb29002b83dd07f66af2c61f40471097e5c6dd76 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-05-16T23:13:09,155   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,156   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,156   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,156   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,156   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,156   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,156   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,157   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,157   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,157   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,157   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,157   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,158   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,158   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,158   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,158   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,158   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,158   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,159   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,159   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,159   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,159   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,159   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,160   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,160   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,160   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,160   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,160   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,164   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,164   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,164   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,164   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,164   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,165   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,165   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,165   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,165   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,165   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
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2023-05-16T23:13:09,177   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.19-py3-none-any.whl#sha256=1005a5a682737b1ba3f4858ca3919c129caae8d962bf750308e4cf6e7d37e215 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,178   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.17-py3-none-any.whl#sha256=cd99998c6c3ee48df7148cec7161f3696beede842d4e93bb9da19fa9e2c6c459 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,178   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.16-py3-none-any.whl#sha256=8045990a2fc7c805a4ab8244abe9eae67ac92495cbce12f1c9e8b0daa26a77b1 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,178   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.15-py3-none-any.whl#sha256=4db5d8b5350b36ce41d225c471f0fdd64f708826935ac50675fb278c00275339 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,178   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.14-py3-none-any.whl#sha256=051435884ce3f924fc9ba4dcb342a0d0ac85ff52bda6e656389f9a6f7eefec84 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.12-py3-none-any.whl#sha256=8d96fbe0cf32ec0d217201a2f3274aedc42fb18f06b218394d4be0bfee25181a (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.9-py3-none-any.whl#sha256=f91729081bef559daf39b7eecfd7ae81dbd90706ad12061dc95146e3737a7385 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.8-py3-none-any.whl#sha256=716d25ae18a4a9a3c8cfb1f0b0399f72463490e4f85a66631f3e77c0ddc427e3 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.7-py3-none-any.whl#sha256=899ef09b80e1ad2e3931cb2023fae09cfeecd45b83fade6c8e8739126ca67a20 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.6-py3-none-any.whl#sha256=0a288cd1efd660482dcc967caed02315dd8f02c19a0287eee0b8519d761db1b3 (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,180   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2023-05-16T23:13:09,180 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-05-16T23:13:09,180 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-05-16T23:13:09,216 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-05-16T23:13:09,232 Collecting moleculekit==1.6.9
2023-05-16T23:13:09,234   Created temporary directory: /tmp/pip-unpack-dyo_09kl
2023-05-16T23:13:09,279   Downloading moleculekit-1.6.9.tar.gz (5.8 MB)
2023-05-16T23:13:11,121   Added moleculekit==1.6.9 from https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz to build tracker '/tmp/pip-build-tracker-b7l3o7k4'
2023-05-16T23:13:11,130   Created temporary directory: /tmp/pip-build-env-s_rjh1k0
2023-05-16T23:13:11,140   Installing build dependencies: started
2023-05-16T23:13:11,141   Running command pip subprocess to install build dependencies
2023-05-16T23:13:12,358   Using pip 23.1.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-05-16T23:13:12,715   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-05-16T23:13:14,392   Collecting setuptools
2023-05-16T23:13:14,474     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.7.2-py3-none-any.whl (1.1 MB)
2023-05-16T23:13:15,671   Collecting numpy>=1.18.5
2023-05-16T23:13:16,655     Using cached https://www.piwheels.org/simple/numpy/numpy-1.24.3-cp39-cp39-linux_armv7l.whl (12.3 MB)
2023-05-16T23:13:18,484   Collecting Cython>=0.29.21
2023-05-16T23:13:18,884     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.34-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-05-16T23:13:19,091   Collecting toml
2023-05-16T23:13:19,110     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-05-16T23:13:19,217   Collecting versioneer[toml]==0.28
2023-05-16T23:13:19,240     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-05-16T23:13:19,392   Collecting tomli (from versioneer[toml]==0.28)
2023-05-16T23:13:19,408     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-05-16T23:13:21,149   Installing collected packages: versioneer, tomli, toml, setuptools, numpy, Cython
2023-05-16T23:13:21,185     Creating /tmp/pip-build-env-s_rjh1k0/overlay/bin
2023-05-16T23:13:21,187     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/versioneer to 755
2023-05-16T23:13:31,799     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/f2py to 755
2023-05-16T23:13:31,801     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/f2py3 to 755
2023-05-16T23:13:31,803     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/f2py3.9 to 755
2023-05-16T23:13:34,531     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/cygdb to 755
2023-05-16T23:13:34,533     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/cython to 755
2023-05-16T23:13:34,535     changing mode of /tmp/pip-build-env-s_rjh1k0/overlay/bin/cythonize to 755
2023-05-16T23:13:34,561   Successfully installed Cython-0.29.34 numpy-1.24.3 setuptools-67.7.2 toml-0.10.2 tomli-2.0.1 versioneer-0.28
2023-05-16T23:13:34,948   Installing build dependencies: finished with status 'done'
2023-05-16T23:13:34,953   Getting requirements to build wheel: started
2023-05-16T23:13:34,955   Running command Getting requirements to build wheel
2023-05-16T23:14:18,365   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,366   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,366   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,367   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,367   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,367   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,367   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,367   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,367   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,368   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-05-16T23:14:18,368   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-05-16T23:14:18,368   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2023-05-16T23:14:18,368   [ 2/11] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2023-05-16T23:14:18,368   [ 3/11] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2023-05-16T23:14:18,368   [ 4/11] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2023-05-16T23:14:18,368   [ 5/11] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2023-05-16T23:14:18,368   [ 6/11] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2023-05-16T23:14:18,369   [ 7/11] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2023-05-16T23:14:18,369   [ 8/11] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2023-05-16T23:14:18,369   [ 9/11] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2023-05-16T23:14:18,369   [10/11] Cythonizing moleculekit/wrapping/wrapping.pyx
2023-05-16T23:14:18,369   [11/11] Cythonizing moleculekit/xtc_utils/xtc.pyx
2023-05-16T23:14:18,440   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-05-16T23:14:18,440     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-05-16T23:14:18,708   running egg_info
2023-05-16T23:14:18,714   writing moleculekit.egg-info/PKG-INFO
2023-05-16T23:14:18,716   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-05-16T23:14:18,718   writing requirements to moleculekit.egg-info/requires.txt
2023-05-16T23:14:18,719   writing top-level names to moleculekit.egg-info/top_level.txt
2023-05-16T23:14:18,748   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:18,779   reading manifest template 'MANIFEST.in'
2023-05-16T23:14:18,989   no previously-included directories found matching 'moleculekit/test-data'
2023-05-16T23:14:18,990   no previously-included directories found matching 'moleculekit/tests'
2023-05-16T23:14:18,991   no previously-included directories found matching 'package'
2023-05-16T23:14:18,991   adding license file 'LICENSE'
2023-05-16T23:14:19,008   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:19,882   Getting requirements to build wheel: finished with status 'done'
2023-05-16T23:14:19,897   Installing backend dependencies: started
2023-05-16T23:14:19,898   Running command pip subprocess to install backend dependencies
2023-05-16T23:14:21,159   Using pip 23.1.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-05-16T23:14:21,576   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-05-16T23:14:22,019   Collecting wheel
2023-05-16T23:14:22,038     Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB)
2023-05-16T23:14:23,387   Installing collected packages: wheel
2023-05-16T23:14:23,614     Creating /tmp/pip-build-env-s_rjh1k0/normal/bin
2023-05-16T23:14:23,616     changing mode of /tmp/pip-build-env-s_rjh1k0/normal/bin/wheel to 755
2023-05-16T23:14:23,629   Successfully installed wheel-0.40.0
2023-05-16T23:14:23,851   Installing backend dependencies: finished with status 'done'
2023-05-16T23:14:23,853   Created temporary directory: /tmp/pip-modern-metadata-n773v3u9
2023-05-16T23:14:23,856   Preparing metadata (pyproject.toml): started
2023-05-16T23:14:23,857   Running command Preparing metadata (pyproject.toml)
2023-05-16T23:14:25,508   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-05-16T23:14:25,509     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-05-16T23:14:25,783   running dist_info
2023-05-16T23:14:25,785   creating /tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info
2023-05-16T23:14:25,791   writing /tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/PKG-INFO
2023-05-16T23:14:25,794   writing dependency_links to /tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/dependency_links.txt
2023-05-16T23:14:25,797   writing requirements to /tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/requires.txt
2023-05-16T23:14:25,798   writing top-level names to /tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/top_level.txt
2023-05-16T23:14:25,799   writing manifest file '/tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:25,834   reading manifest file '/tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:25,836   reading manifest template 'MANIFEST.in'
2023-05-16T23:14:26,099   no previously-included directories found matching 'moleculekit/test-data'
2023-05-16T23:14:26,100   no previously-included directories found matching 'moleculekit/tests'
2023-05-16T23:14:26,101   no previously-included directories found matching 'package'
2023-05-16T23:14:26,101   adding license file 'LICENSE'
2023-05-16T23:14:26,113   writing manifest file '/tmp/pip-modern-metadata-n773v3u9/moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:26,122   creating '/tmp/pip-modern-metadata-n773v3u9/moleculekit-1.6.9.dist-info'
2023-05-16T23:14:26,338   Preparing metadata (pyproject.toml): finished with status 'done'
2023-05-16T23:14:26,344   Source in /tmp/pip-wheel-vakbq86i/moleculekit_3ac6906171c549e7a08a62130bfa8a18 has version 1.6.9, which satisfies requirement moleculekit==1.6.9 from https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz
2023-05-16T23:14:26,345   Removed moleculekit==1.6.9 from https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz from build tracker '/tmp/pip-build-tracker-b7l3o7k4'
2023-05-16T23:14:26,351 Created temporary directory: /tmp/pip-unpack-cgxrdgso
2023-05-16T23:14:26,352 Building wheels for collected packages: moleculekit
2023-05-16T23:14:26,357   Created temporary directory: /tmp/pip-wheel-d6ryray6
2023-05-16T23:14:26,357   Destination directory: /tmp/pip-wheel-d6ryray6
2023-05-16T23:14:26,359   Building wheel for moleculekit (pyproject.toml): started
2023-05-16T23:14:26,360   Running command Building wheel for moleculekit (pyproject.toml)
2023-05-16T23:14:27,917   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-05-16T23:14:27,917     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-05-16T23:14:28,158   running bdist_wheel
2023-05-16T23:14:28,175   running build
2023-05-16T23:14:28,175   running build_py
2023-05-16T23:14:28,183   creating build
2023-05-16T23:14:28,183   creating build/lib.linux-armv7l-cpython-39
2023-05-16T23:14:28,184   creating build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,185   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,187   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,189   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,191   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,192   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,194   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,196   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,198   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,202   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,204   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,206   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,209   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,211   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,213   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,215   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,217   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,228   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,231   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,233   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,235   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,237   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,239   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,241   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,243   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,246   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,248   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,251   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-05-16T23:14:28,254   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-05-16T23:14:28,255   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-05-16T23:14:28,257   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-05-16T23:14:28,260   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,261   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,264   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,266   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,268   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,270   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,273   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,275   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,277   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,279   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,282   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,284   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,286   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,289   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-05-16T23:14:28,293   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-05-16T23:14:28,294   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-05-16T23:14:28,296   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-05-16T23:14:28,299   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-05-16T23:14:28,301   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-05-16T23:14:28,304   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-05-16T23:14:28,304   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-05-16T23:14:28,306   creating build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-05-16T23:14:28,307   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-05-16T23:14:28,309   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-05-16T23:14:28,311   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-05-16T23:14:28,317   creating build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,317   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,319   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,321   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,323   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,325   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,327   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,329   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,332   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,334   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,337   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,339   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,341   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,343   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,345   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,347   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-05-16T23:14:28,350   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-05-16T23:14:28,350   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-05-16T23:14:28,352   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-05-16T23:14:28,354   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-05-16T23:14:28,356   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-05-16T23:14:28,358   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-05-16T23:14:28,359   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-05-16T23:14:28,361   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-05-16T23:14:28,363   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-05-16T23:14:28,364   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-05-16T23:14:28,366   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-05-16T23:14:28,368   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-05-16T23:14:28,371   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-05-16T23:14:28,373   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-05-16T23:14:28,374   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-05-16T23:14:28,376   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-05-16T23:14:28,378   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-05-16T23:14:28,379   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-05-16T23:14:28,380   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-05-16T23:14:28,382   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-05-16T23:14:28,384   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-05-16T23:14:28,386   running egg_info
2023-05-16T23:14:28,392   writing moleculekit.egg-info/PKG-INFO
2023-05-16T23:14:28,394   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-05-16T23:14:28,396   writing requirements to moleculekit.egg-info/requires.txt
2023-05-16T23:14:28,397   writing top-level names to moleculekit.egg-info/top_level.txt
2023-05-16T23:14:28,415   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:28,423   reading manifest template 'MANIFEST.in'
2023-05-16T23:14:28,630   no previously-included directories found matching 'moleculekit/test-data'
2023-05-16T23:14:28,631   no previously-included directories found matching 'moleculekit/tests'
2023-05-16T23:14:28,632   no previously-included directories found matching 'package'
2023-05-16T23:14:28,632   adding license file 'LICENSE'
2023-05-16T23:14:28,649   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-05-16T23:14:28,659   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-05-16T23:14:28,659   !!

2023-05-16T23:14:28,659           ********************************************************************************
2023-05-16T23:14:28,659           ############################
2023-05-16T23:14:28,659           # Package would be ignored #
2023-05-16T23:14:28,659           ############################
2023-05-16T23:14:28,660           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-05-16T23:14:28,660           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,660           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,660           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-05-16T23:14:28,660           to the `packages` configuration field.

2023-05-16T23:14:28,660           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,661           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,661           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,661           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,661           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,661           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-05-16T23:14:28,661           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-05-16T23:14:28,662           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,662           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,662           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,662           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,662           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,663           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,663                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,663                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,663                 directory, all directories are treated like packages.
2023-05-16T23:14:28,663           ********************************************************************************

2023-05-16T23:14:28,663   !!
2023-05-16T23:14:28,663     check.warn(importable)
2023-05-16T23:14:28,664   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-05-16T23:14:28,664   !!

2023-05-16T23:14:28,664           ********************************************************************************
2023-05-16T23:14:28,664           ############################
2023-05-16T23:14:28,664           # Package would be ignored #
2023-05-16T23:14:28,664           ############################
2023-05-16T23:14:28,665           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-05-16T23:14:28,665           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,665           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,665           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-05-16T23:14:28,665           to the `packages` configuration field.

2023-05-16T23:14:28,665           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,665           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,666           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,666           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,666           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,666           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-05-16T23:14:28,666           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-05-16T23:14:28,666           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,667           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,667           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,667           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,667           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,667           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,668                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,668                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,668                 directory, all directories are treated like packages.
2023-05-16T23:14:28,668           ********************************************************************************

2023-05-16T23:14:28,668   !!
2023-05-16T23:14:28,668     check.warn(importable)
2023-05-16T23:14:28,668   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-05-16T23:14:28,668   !!

2023-05-16T23:14:28,669           ********************************************************************************
2023-05-16T23:14:28,669           ############################
2023-05-16T23:14:28,669           # Package would be ignored #
2023-05-16T23:14:28,669           ############################
2023-05-16T23:14:28,669           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-05-16T23:14:28,669           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,669           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,670           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-05-16T23:14:28,670           to the `packages` configuration field.

2023-05-16T23:14:28,670           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,670           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,670           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,670           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,671           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,671           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-05-16T23:14:28,671           already explicitly excluding 'moleculekit.distance_utils' via
2023-05-16T23:14:28,671           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,671           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,671           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,671           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,672           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,672           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,672                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,672                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,672                 directory, all directories are treated like packages.
2023-05-16T23:14:28,672           ********************************************************************************

2023-05-16T23:14:28,673   !!
2023-05-16T23:14:28,673     check.warn(importable)
2023-05-16T23:14:28,673   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-05-16T23:14:28,673   !!

2023-05-16T23:14:28,673           ********************************************************************************
2023-05-16T23:14:28,673           ############################
2023-05-16T23:14:28,673           # Package would be ignored #
2023-05-16T23:14:28,674           ############################
2023-05-16T23:14:28,674           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-05-16T23:14:28,674           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,674           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,674           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-05-16T23:14:28,674           to the `packages` configuration field.

2023-05-16T23:14:28,675           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,675           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,675           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,675           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,675           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,675           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-05-16T23:14:28,675           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-05-16T23:14:28,676           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,676           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,676           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,676           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,676           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,677           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,677                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,677                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,677                 directory, all directories are treated like packages.
2023-05-16T23:14:28,677           ********************************************************************************

2023-05-16T23:14:28,677   !!
2023-05-16T23:14:28,677     check.warn(importable)
2023-05-16T23:14:28,678   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-05-16T23:14:28,678   !!

2023-05-16T23:14:28,678           ********************************************************************************
2023-05-16T23:14:28,678           ############################
2023-05-16T23:14:28,678           # Package would be ignored #
2023-05-16T23:14:28,678           ############################
2023-05-16T23:14:28,678           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-05-16T23:14:28,678           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,679           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,679           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-05-16T23:14:28,679           to the `packages` configuration field.

2023-05-16T23:14:28,679           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,679           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,679           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,679           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,680           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,680           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-05-16T23:14:28,680           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-05-16T23:14:28,680           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,680           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,680           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,681           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,681           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,681           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,681                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,681                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,682                 directory, all directories are treated like packages.
2023-05-16T23:14:28,682           ********************************************************************************

2023-05-16T23:14:28,682   !!
2023-05-16T23:14:28,682     check.warn(importable)
2023-05-16T23:14:28,682   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-05-16T23:14:28,682   !!

2023-05-16T23:14:28,683           ********************************************************************************
2023-05-16T23:14:28,683           ############################
2023-05-16T23:14:28,683           # Package would be ignored #
2023-05-16T23:14:28,683           ############################
2023-05-16T23:14:28,683           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-05-16T23:14:28,683           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,683           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,683           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-05-16T23:14:28,684           to the `packages` configuration field.

2023-05-16T23:14:28,684           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,684           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,684           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,684           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,684           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,685           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-05-16T23:14:28,685           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-05-16T23:14:28,685           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,685           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,685           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,685           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,686           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,686           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,686                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,686                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,686                 directory, all directories are treated like packages.
2023-05-16T23:14:28,686           ********************************************************************************

2023-05-16T23:14:28,686   !!
2023-05-16T23:14:28,687     check.warn(importable)
2023-05-16T23:14:28,687   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-05-16T23:14:28,687   !!

2023-05-16T23:14:28,687           ********************************************************************************
2023-05-16T23:14:28,687           ############################
2023-05-16T23:14:28,687           # Package would be ignored #
2023-05-16T23:14:28,687           ############################
2023-05-16T23:14:28,688           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-05-16T23:14:28,688           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,688           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,688           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-05-16T23:14:28,688           to the `packages` configuration field.

2023-05-16T23:14:28,688           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,688           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,689           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,689           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,689           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,689           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-05-16T23:14:28,689           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-05-16T23:14:28,689           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,690           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,690           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,690           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,690           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,690           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,691                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,691                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,691                 directory, all directories are treated like packages.
2023-05-16T23:14:28,691           ********************************************************************************

2023-05-16T23:14:28,691   !!
2023-05-16T23:14:28,691     check.warn(importable)
2023-05-16T23:14:28,691   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-05-16T23:14:28,691   !!

2023-05-16T23:14:28,692           ********************************************************************************
2023-05-16T23:14:28,692           ############################
2023-05-16T23:14:28,692           # Package would be ignored #
2023-05-16T23:14:28,692           ############################
2023-05-16T23:14:28,692           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-05-16T23:14:28,692           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,692           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,692           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-05-16T23:14:28,693           to the `packages` configuration field.

2023-05-16T23:14:28,693           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,693           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,693           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,693           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,693           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,694           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-05-16T23:14:28,694           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-05-16T23:14:28,694           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,694           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,694           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,694           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,695           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,695           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,695                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,695                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,695                 directory, all directories are treated like packages.
2023-05-16T23:14:28,695           ********************************************************************************

2023-05-16T23:14:28,696   !!
2023-05-16T23:14:28,696     check.warn(importable)
2023-05-16T23:14:28,696   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-05-16T23:14:28,696   !!

2023-05-16T23:14:28,696           ********************************************************************************
2023-05-16T23:14:28,696           ############################
2023-05-16T23:14:28,696           # Package would be ignored #
2023-05-16T23:14:28,696           ############################
2023-05-16T23:14:28,697           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-05-16T23:14:28,697           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,697           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,697           package, please make sure that 'moleculekit.share' is explicitly added
2023-05-16T23:14:28,697           to the `packages` configuration field.

2023-05-16T23:14:28,697           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,697           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,697           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,698           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,698           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,698           If you don't want 'moleculekit.share' to be distributed and are
2023-05-16T23:14:28,698           already explicitly excluding 'moleculekit.share' via
2023-05-16T23:14:28,698           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,698           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,699           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,699           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,699           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,700           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,700                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,700                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,700                 directory, all directories are treated like packages.
2023-05-16T23:14:28,700           ********************************************************************************

2023-05-16T23:14:28,700   !!
2023-05-16T23:14:28,700     check.warn(importable)
2023-05-16T23:14:28,701   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-05-16T23:14:28,701   !!

2023-05-16T23:14:28,701           ********************************************************************************
2023-05-16T23:14:28,701           ############################
2023-05-16T23:14:28,701           # Package would be ignored #
2023-05-16T23:14:28,701           ############################
2023-05-16T23:14:28,701           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-05-16T23:14:28,702           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,702           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,702           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-05-16T23:14:28,702           to the `packages` configuration field.

2023-05-16T23:14:28,702           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,703           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,703           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,703           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,703           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,703           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-05-16T23:14:28,704           already explicitly excluding 'moleculekit.share.atomselect' via
2023-05-16T23:14:28,704           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,704           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,704           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,704           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,704           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,705           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,705                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,705                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,705                 directory, all directories are treated like packages.
2023-05-16T23:14:28,705           ********************************************************************************

2023-05-16T23:14:28,706   !!
2023-05-16T23:14:28,706     check.warn(importable)
2023-05-16T23:14:28,706   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-05-16T23:14:28,706   !!

2023-05-16T23:14:28,706           ********************************************************************************
2023-05-16T23:14:28,706           ############################
2023-05-16T23:14:28,706           # Package would be ignored #
2023-05-16T23:14:28,706           ############################
2023-05-16T23:14:28,707           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-05-16T23:14:28,707           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,707           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,707           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-05-16T23:14:28,707           to the `packages` configuration field.

2023-05-16T23:14:28,707           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,707           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,708           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,708           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,708           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,708           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-05-16T23:14:28,708           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-05-16T23:14:28,708           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,709           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,709           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,709           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,709           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,709           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,710                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,710                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,710                 directory, all directories are treated like packages.
2023-05-16T23:14:28,710           ********************************************************************************

2023-05-16T23:14:28,710   !!
2023-05-16T23:14:28,710     check.warn(importable)
2023-05-16T23:14:28,710   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-05-16T23:14:28,711   !!

2023-05-16T23:14:28,711           ********************************************************************************
2023-05-16T23:14:28,711           ############################
2023-05-16T23:14:28,711           # Package would be ignored #
2023-05-16T23:14:28,711           ############################
2023-05-16T23:14:28,711           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-05-16T23:14:28,712           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,712           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,712           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-05-16T23:14:28,712           to the `packages` configuration field.

2023-05-16T23:14:28,712           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,712           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,713           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,713           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,713           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,713           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-05-16T23:14:28,714           already explicitly excluding 'moleculekit.tmalign' via
2023-05-16T23:14:28,714           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,714           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,714           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,714           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,715           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,715           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,715                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,715                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,715                 directory, all directories are treated like packages.
2023-05-16T23:14:28,715           ********************************************************************************

2023-05-16T23:14:28,716   !!
2023-05-16T23:14:28,716     check.warn(importable)
2023-05-16T23:14:28,716   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-05-16T23:14:28,716   !!

2023-05-16T23:14:28,716           ********************************************************************************
2023-05-16T23:14:28,717           ############################
2023-05-16T23:14:28,717           # Package would be ignored #
2023-05-16T23:14:28,717           ############################
2023-05-16T23:14:28,717           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-05-16T23:14:28,717           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,717           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,717           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-05-16T23:14:28,718           to the `packages` configuration field.

2023-05-16T23:14:28,718           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,718           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,718           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,718           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,719           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,719           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-05-16T23:14:28,719           already explicitly excluding 'moleculekit.tmalign.include' via
2023-05-16T23:14:28,719           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,719           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,720           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,720           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,720           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,720           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,721                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,721                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,721                 directory, all directories are treated like packages.
2023-05-16T23:14:28,721           ********************************************************************************

2023-05-16T23:14:28,721   !!
2023-05-16T23:14:28,721     check.warn(importable)
2023-05-16T23:14:28,721   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-05-16T23:14:28,722   !!

2023-05-16T23:14:28,722           ********************************************************************************
2023-05-16T23:14:28,722           ############################
2023-05-16T23:14:28,722           # Package would be ignored #
2023-05-16T23:14:28,722           ############################
2023-05-16T23:14:28,722           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-05-16T23:14:28,723           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,723           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,723           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-05-16T23:14:28,723           to the `packages` configuration field.

2023-05-16T23:14:28,723           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,723           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,724           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,724           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,724           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,725           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-05-16T23:14:28,725           already explicitly excluding 'moleculekit.tmalign.src' via
2023-05-16T23:14:28,725           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,725           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,725           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,725           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,726           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,726           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,726                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,726                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,726                 directory, all directories are treated like packages.
2023-05-16T23:14:28,727           ********************************************************************************

2023-05-16T23:14:28,727   !!
2023-05-16T23:14:28,727     check.warn(importable)
2023-05-16T23:14:28,727   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-05-16T23:14:28,727   !!

2023-05-16T23:14:28,727           ********************************************************************************
2023-05-16T23:14:28,728           ############################
2023-05-16T23:14:28,728           # Package would be ignored #
2023-05-16T23:14:28,728           ############################
2023-05-16T23:14:28,728           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-05-16T23:14:28,728           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,728           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,728           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-05-16T23:14:28,729           to the `packages` configuration field.

2023-05-16T23:14:28,729           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,729           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,729           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,729           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,730           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,730           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-05-16T23:14:28,730           already explicitly excluding 'moleculekit.wrapping' via
2023-05-16T23:14:28,730           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,730           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,730           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,731           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,731           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,731           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,731                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,732                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,732                 directory, all directories are treated like packages.
2023-05-16T23:14:28,732           ********************************************************************************

2023-05-16T23:14:28,732   !!
2023-05-16T23:14:28,732     check.warn(importable)
2023-05-16T23:14:28,732   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-05-16T23:14:28,732   !!

2023-05-16T23:14:28,733           ********************************************************************************
2023-05-16T23:14:28,733           ############################
2023-05-16T23:14:28,733           # Package would be ignored #
2023-05-16T23:14:28,733           ############################
2023-05-16T23:14:28,733           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-05-16T23:14:28,733           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,734           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,734           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-05-16T23:14:28,734           to the `packages` configuration field.

2023-05-16T23:14:28,734           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,734           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,734           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,735           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,735           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,735           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-05-16T23:14:28,735           already explicitly excluding 'moleculekit.xtc_utils' via
2023-05-16T23:14:28,735           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,735           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,735           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,736           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,736           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,736           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,737                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,737                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,737                 directory, all directories are treated like packages.
2023-05-16T23:14:28,737           ********************************************************************************

2023-05-16T23:14:28,737   !!
2023-05-16T23:14:28,737     check.warn(importable)
2023-05-16T23:14:28,737   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-05-16T23:14:28,737   !!

2023-05-16T23:14:28,738           ********************************************************************************
2023-05-16T23:14:28,738           ############################
2023-05-16T23:14:28,738           # Package would be ignored #
2023-05-16T23:14:28,738           ############################
2023-05-16T23:14:28,738           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-05-16T23:14:28,739           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,739           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,739           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-05-16T23:14:28,739           to the `packages` configuration field.

2023-05-16T23:14:28,739           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,739           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,740           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,740           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,740           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,740           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-05-16T23:14:28,740           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-05-16T23:14:28,741           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,741           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,741           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,741           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,741           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,742           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,742                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,742                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,742                 directory, all directories are treated like packages.
2023-05-16T23:14:28,742           ********************************************************************************

2023-05-16T23:14:28,742   !!
2023-05-16T23:14:28,742     check.warn(importable)
2023-05-16T23:14:28,743   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-05-16T23:14:28,743   !!

2023-05-16T23:14:28,743           ********************************************************************************
2023-05-16T23:14:28,743           ############################
2023-05-16T23:14:28,743           # Package would be ignored #
2023-05-16T23:14:28,743           ############################
2023-05-16T23:14:28,743           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-05-16T23:14:28,743           but it is absent from setuptools' `packages` configuration.

2023-05-16T23:14:28,744           This leads to an ambiguous overall configuration. If you want to distribute this
2023-05-16T23:14:28,744           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-05-16T23:14:28,744           to the `packages` configuration field.

2023-05-16T23:14:28,744           Alternatively, you can also rely on setuptools' discovery methods
2023-05-16T23:14:28,744           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-05-16T23:14:28,745           instead of `find_packages(...)`/`find:`).

2023-05-16T23:14:28,745           You can read more about "package discovery" on setuptools documentation page:

2023-05-16T23:14:28,745           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-05-16T23:14:28,745           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-05-16T23:14:28,746           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-05-16T23:14:28,746           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-05-16T23:14:28,746           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-05-16T23:14:28,746           combination with a more fine grained `package-data` configuration.

2023-05-16T23:14:28,748           You can read more about "package data files" on setuptools documentation page:

2023-05-16T23:14:28,748           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-05-16T23:14:28,749           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-05-16T23:14:28,749                 even if it does not contain any `.py` files.
2023-05-16T23:14:28,749                 On the other hand, currently there is no concept of package data
2023-05-16T23:14:28,749                 directory, all directories are treated like packages.
2023-05-16T23:14:28,749           ********************************************************************************

2023-05-16T23:14:28,750   !!
2023-05-16T23:14:28,750     check.warn(importable)
2023-05-16T23:14:28,750   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,750   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:28,750   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-05-16T23:14:28,751   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-05-16T23:14:28,751   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-05-16T23:14:28,751   creating build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-05-16T23:14:28,751   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-05-16T23:14:28,755   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-05-16T23:14:28,757   creating build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-05-16T23:14:28,758   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-05-16T23:14:28,775   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-05-16T23:14:28,777   creating build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-05-16T23:14:28,778   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-05-16T23:14:28,794   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-05-16T23:14:28,796   creating build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-05-16T23:14:28,797   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-05-16T23:14:28,799   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-05-16T23:14:28,801   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-05-16T23:14:29,001   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-05-16T23:14:29,002   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-05-16T23:14:29,004   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr
2023-05-16T23:14:29,005   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,006   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,008   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,011   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,013   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,015   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,017   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,020   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,022   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,024   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,026   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,028   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,031   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,033   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,035   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,038   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,040   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,042   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,045   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,047   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,049   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,051   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,054   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,056   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,058   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,060   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,063   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,065   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,067   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,069   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,071   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,074   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,076   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,078   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,080   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,082   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,084   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,086   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,089   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,091   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,093   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,095   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,098   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,100   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,102   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,104   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,107   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,109   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,111   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,113   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,116   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,118   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,120   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,122   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,125   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,127   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,129   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,131   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,133   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,136   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,138   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,140   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,142   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,144   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,147   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,149   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,151   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,154   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,156   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,158   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,160   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,162   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,164   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,167   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,169   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,171   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,173   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,175   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,177   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,179   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,181   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,184   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,186   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,188   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,190   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,192   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,195   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,197   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,199   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,201   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,203   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,205   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,208   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,210   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,212   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,214   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,217   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,219   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,221   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,223   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,225   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,227   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,230   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,232   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,234   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,236   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,238   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,241   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,243   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,245   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,247   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,249   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,251   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,254   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,256   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,258   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,260   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,262   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,264   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,266   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,268   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,269   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,271   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,273   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,275   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,277   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,279   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,281   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,283   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,285   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,287   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,289   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,291   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,293   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,295   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,297   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,299   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,301   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,303   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,304   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,306   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,308   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,310   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,312   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,314   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,316   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,317   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,320   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,322   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,323   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,325   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,327   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,329   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,331   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,333   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,335   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,337   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,339   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,341   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,343   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,345   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,347   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,349   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,350   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,352   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,354   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,356   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,358   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,360   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,361   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,363   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,365   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,367   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,369   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,371   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,373   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-05-16T23:14:29,375   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-05-16T23:14:29,375   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-05-16T23:14:29,392   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-05-16T23:14:29,394   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-05-16T23:14:29,396   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-05-16T23:14:29,397   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-05-16T23:14:29,399   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-05-16T23:14:29,400   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-05-16T23:14:29,405   creating build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-05-16T23:14:29,406   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-05-16T23:14:29,421   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-05-16T23:14:29,423   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-05-16T23:14:29,424   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-05-16T23:14:29,441   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-05-16T23:14:29,443   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-05-16T23:14:29,445   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-05-16T23:14:29,445   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-05-16T23:14:29,448   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-05-16T23:14:29,450   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-05-16T23:14:29,452   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-05-16T23:14:29,453   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-05-16T23:14:29,456   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-05-16T23:14:29,458   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-05-16T23:14:29,460   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-05-16T23:14:29,461   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-05-16T23:14:29,476   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-05-16T23:14:29,478   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-05-16T23:14:29,479   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-05-16T23:14:29,495   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-05-16T23:14:29,497   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-05-16T23:14:29,498   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-05-16T23:14:29,520   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-05-16T23:14:29,523   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-05-16T23:14:29,523   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-05-16T23:14:29,540   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-05-16T23:14:29,552   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-05-16T23:14:29,552   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.6.9'
2023-05-16T23:14:29,552   running build_ext
2023-05-16T23:14:29,563   building 'moleculekit.interactions.hbonds' extension
2023-05-16T23:14:29,565   creating build/temp.linux-armv7l-cpython-39
2023-05-16T23:14:29,566   creating build/temp.linux-armv7l-cpython-39/moleculekit
2023-05-16T23:14:29,567   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions
2023-05-16T23:14:29,568   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-05-16T23:14:29,570   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -O3
2023-05-16T23:14:29,860   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:14:29,860                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:14:29,860                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:14:29,860                    from moleculekit/interactions/hbonds/hbonds.cpp:786:
2023-05-16T23:14:29,861   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:14:29,861      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:14:29,861         |  ^~~~~~~
2023-05-16T23:14:48,787   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:14:49,105   building 'moleculekit.interactions.pipi' extension
2023-05-16T23:14:49,106   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-05-16T23:14:49,107   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -O3
2023-05-16T23:14:49,343   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:14:49,343                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:14:49,343                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:14:49,343                    from moleculekit/interactions/pipi/pipi.cpp:786:
2023-05-16T23:14:49,344   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:14:49,344      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:14:49,344         |  ^~~~~~~
2023-05-16T23:15:10,480   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:15:10,786   building 'moleculekit.interactions.cationpi' extension
2023-05-16T23:15:10,787   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-05-16T23:15:10,788   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -O3
2023-05-16T23:15:11,016   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:15:11,016                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:15:11,017                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:15:11,017                    from moleculekit/interactions/cationpi/cationpi.cpp:786:
2023-05-16T23:15:11,017   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:15:11,017      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:15:11,017         |  ^~~~~~~
2023-05-16T23:15:32,144   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:15:32,463   building 'moleculekit.interactions.sigmahole' extension
2023-05-16T23:15:32,464   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-05-16T23:15:32,465   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-05-16T23:15:32,690   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:15:32,690                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:15:32,690                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:15:32,691                    from moleculekit/interactions/sigmahole/sigmahole.cpp:786:
2023-05-16T23:15:32,691   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:15:32,691      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:15:32,691         |  ^~~~~~~
2023-05-16T23:15:53,377   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:15:53,686   building 'moleculekit.wrapping' extension
2023-05-16T23:15:53,687   creating build/temp.linux-armv7l-cpython-39/moleculekit/wrapping
2023-05-16T23:15:53,688   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -O3
2023-05-16T23:15:53,912   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:15:53,912                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:15:53,912                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:15:53,913                    from moleculekit/wrapping/wrapping.cpp:786:
2023-05-16T23:15:53,913   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:15:53,913      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:15:53,913         |  ^~~~~~~
2023-05-16T23:16:11,325   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:16:11,533   building 'moleculekit.bondguesser_utils' extension
2023-05-16T23:16:11,533   creating build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-05-16T23:16:11,534   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-05-16T23:16:11,762   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:16:11,762                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:16:11,762                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:16:11,762                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:786:
2023-05-16T23:16:11,762   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:16:11,762      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:16:11,763         |  ^~~~~~~
2023-05-16T23:16:12,918   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-05-16T23:16:12,918   moleculekit/bondguesser_utils/bondguesser_utils.cpp:2962:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-05-16T23:16:12,919    2962 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-05-16T23:16:12,919         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-05-16T23:16:12,919   moleculekit/bondguesser_utils/bondguesser_utils.cpp:2974:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-05-16T23:16:12,919    2974 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-05-16T23:16:12,920         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-05-16T23:16:12,920   moleculekit/bondguesser_utils/bondguesser_utils.cpp:2986:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-05-16T23:16:12,920    2986 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-05-16T23:16:12,920         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-05-16T23:16:12,921   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3025:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,921    3025 |         __pyx_t_12 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-05-16T23:16:12,921         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,922   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3064:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,922    3064 |         __pyx_t_12 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-05-16T23:16:12,922         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,923   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3103:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,923    3103 |         __pyx_t_12 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,923         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,924   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3142:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,924    3142 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-05-16T23:16:12,924         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,925   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3148:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,925    3148 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-05-16T23:16:12,925         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,926   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3189:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,926    3189 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-05-16T23:16:12,926         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,927   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3195:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,927    3195 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,927         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,928   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3236:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,928    3236 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-05-16T23:16:12,928         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,929   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3242:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,929    3242 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,929         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,930   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3283:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,930    3283 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-05-16T23:16:12,930         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,931   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3336:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,931    3336 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,931         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,932   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3383:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,932    3383 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,933         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,933   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3424:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,933    3424 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-05-16T23:16:12,934         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,934   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3430:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,934    3430 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-05-16T23:16:12,934         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,935   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3436:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,935    3436 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,935         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,936   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3483:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,936    3483 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-05-16T23:16:12,936         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,937   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3489:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,937    3489 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,937         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,938   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3530:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,938    3530 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-05-16T23:16:12,938         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,939   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3542:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,939    3542 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,939         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,940   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3595:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-05-16T23:16:12,940    3595 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-05-16T23:16:12,941         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,967   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-05-16T23:16:12,967   moleculekit/bondguesser_utils/bondguesser_utils.cpp:4144:38: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-05-16T23:16:12,967    4144 |       __pyx_t_6 = ((__pyx_v_boxneigh == __pyx_v_n_boxes) != 0);
2023-05-16T23:16:12,967         |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-05-16T23:16:12,968   moleculekit/bondguesser_utils/bondguesser_utils.cpp:4181:38: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-05-16T23:16:12,968    4181 |       __pyx_t_6 = ((__pyx_v_boxneigh == __pyx_v_boxidx) != 0);
2023-05-16T23:16:12,968         |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-05-16T23:16:29,603   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:16:29,898   building 'moleculekit.atomselect_utils' extension
2023-05-16T23:16:29,899   creating build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-05-16T23:16:29,899   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-05-16T23:16:30,129   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:16:30,129                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:16:30,129                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:16:30,129                    from moleculekit/atomselect_utils/atomselect_utils.cpp:786:
2023-05-16T23:16:30,129   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:16:30,129      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:16:30,129         |  ^~~~~~~
2023-05-16T23:16:31,438   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-05-16T23:16:31,438   moleculekit/atomselect_utils/atomselect_utils.cpp:5414:162: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-05-16T23:16:31,438    5414 |       __pyx_t_3 = (((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum) != 0);
2023-05-16T23:16:31,438         |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-05-16T23:16:31,444   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-05-16T23:16:31,444   moleculekit/atomselect_utils/atomselect_utils.cpp:5668:164: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-05-16T23:16:31,444    5668 |         __pyx_t_6 = (((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i) != 0);
2023-05-16T23:16:31,444         |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-05-16T23:16:31,450   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-05-16T23:16:31,450   moleculekit/atomselect_utils/atomselect_utils.cpp:5934:164: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-05-16T23:16:31,450    5934 |         __pyx_t_6 = (((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i) != 0);
2023-05-16T23:16:31,450         |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-05-16T23:16:54,335   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:16:54,658   building 'moleculekit.distance_utils' extension
2023-05-16T23:16:54,659   creating build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-05-16T23:16:54,660   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -O3
2023-05-16T23:16:54,889   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:16:54,889                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:16:54,889                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:16:54,889                    from moleculekit/distance_utils/distance_utils.cpp:786:
2023-05-16T23:16:54,890   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:16:54,890      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:16:54,890         |  ^~~~~~~
2023-05-16T23:17:17,273   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:17:17,596   building 'moleculekit.occupancy_utils' extension
2023-05-16T23:17:17,597   creating build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-05-16T23:17:17,597   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-05-16T23:17:17,823   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:17:17,823                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:17:17,823                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:17:17,823                    from moleculekit/occupancy_utils/occupancy_utils.cpp:786:
2023-05-16T23:17:17,824   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:17:17,824      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:17:17,824         |  ^~~~~~~
2023-05-16T23:17:34,525   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:17:34,732   building 'moleculekit.xtc' extension
2023-05-16T23:17:34,732   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-05-16T23:17:34,733   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-05-16T23:17:34,734   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o
2023-05-16T23:17:34,969   moleculekit/xtc_utils/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,969      66 |  "OK",
2023-05-16T23:17:34,969         |  ^~~~
2023-05-16T23:17:34,970   moleculekit/xtc_utils/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,970      67 |  "Header",
2023-05-16T23:17:34,970         |  ^~~~~~~~
2023-05-16T23:17:34,970   moleculekit/xtc_utils/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,970      68 |  "String",
2023-05-16T23:17:34,970         |  ^~~~~~~~
2023-05-16T23:17:34,971   moleculekit/xtc_utils/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,971      69 |  "Double",
2023-05-16T23:17:34,971         |  ^~~~~~~~
2023-05-16T23:17:34,971   moleculekit/xtc_utils/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,971      70 |  "Integer",
2023-05-16T23:17:34,971         |  ^~~~~~~~~
2023-05-16T23:17:34,971   moleculekit/xtc_utils/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,971      71 |  "Float",
2023-05-16T23:17:34,972         |  ^~~~~~~
2023-05-16T23:17:34,972   moleculekit/xtc_utils/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,972      72 |  "Unsigned integer",
2023-05-16T23:17:34,972         |  ^~~~~~~~~~~~~~~~~~
2023-05-16T23:17:34,972   moleculekit/xtc_utils/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,972      73 |  "Compressed 3D coordinate",
2023-05-16T23:17:34,972         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:17:34,972   moleculekit/xtc_utils/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,973      74 |  "Closing file",
2023-05-16T23:17:34,973         |  ^~~~~~~~~~~~~~
2023-05-16T23:17:34,973   moleculekit/xtc_utils/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,973      75 |  "Magic number",
2023-05-16T23:17:34,973         |  ^~~~~~~~~~~~~~
2023-05-16T23:17:34,973   moleculekit/xtc_utils/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,973      76 |  "Not enough memory",
2023-05-16T23:17:34,974         |  ^~~~~~~~~~~~~~~~~~~
2023-05-16T23:17:34,974   moleculekit/xtc_utils/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,974      77 |  "End of file",
2023-05-16T23:17:34,974         |  ^~~~~~~~~~~~~
2023-05-16T23:17:34,974   moleculekit/xtc_utils/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-05-16T23:17:34,974      78 |  "File not found"
2023-05-16T23:17:34,974         |  ^~~~~~~~~~~~~~~~
2023-05-16T23:17:34,978   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-05-16T23:17:34,979   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,979     459 |     while (size >= num && num_of_bits < 32)
2023-05-16T23:17:34,979         |            ~~~~~^~~~~~
2023-05-16T23:17:34,979   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-05-16T23:17:34,979   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:34,980     505 |     while (bytes[num_of_bytes] >= num)
2023-05-16T23:17:34,980         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-05-16T23:17:34,982   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-05-16T23:17:34,982   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,982     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-05-16T23:17:34,982         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-05-16T23:17:34,982   moleculekit/xtc_utils/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,983     616 |   for (i = 0; i < num_of_bytes; i++)
2023-05-16T23:17:34,983         |               ~~^~~~~~~~~~~~~~
2023-05-16T23:17:34,983   moleculekit/xtc_utils/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,983     624 |   for (i = 0; i < num_of_bytes-1; i++)
2023-05-16T23:17:34,983         |               ~~^~~~~~~~~~~~~~~~
2023-05-16T23:17:34,983   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-05-16T23:17:34,983   moleculekit/xtc_utils/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:34,984     664 |   if (lastbits < num_of_bits)
2023-05-16T23:17:34,984         |       ~~~~~~~~~^~~~~~~~~~~~~
2023-05-16T23:17:34,987   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-05-16T23:17:34,987   moleculekit/xtc_utils/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:34,987     785 |  if(size3>xfp->buf1size)
2023-05-16T23:17:34,987         |     ~~~~~^~~~~~~~~~~~~~
2023-05-16T23:17:34,989   moleculekit/xtc_utils/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:34,989     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-05-16T23:17:34,989         |                   ^
2023-05-16T23:17:34,991   moleculekit/xtc_utils/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,992     932 |     if(countmjh >= size3 ) { return -1; }
2023-05-16T23:17:34,992         |        ~~~~~~~~~^~~~~~~~
2023-05-16T23:17:34,992   moleculekit/xtc_utils/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,992     935 |     if(countmjh >= size3 ) { return -1; }
2023-05-16T23:17:34,992         |        ~~~~~~~~~^~~~~~~~
2023-05-16T23:17:34,992   moleculekit/xtc_utils/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,993     938 |     if(countmjh >= size3 ) { return -1; }
2023-05-16T23:17:34,993         |        ~~~~~~~~~^~~~~~~~
2023-05-16T23:17:34,993   moleculekit/xtc_utils/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,993     945 |     if(countmjh >= size3 ) { return -1; }
2023-05-16T23:17:34,993         |        ~~~~~~~~~^~~~~~~~
2023-05-16T23:17:34,993   moleculekit/xtc_utils/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,993     948 |     if(countmjh >= size3 ) { return -1; }
2023-05-16T23:17:34,993         |        ~~~~~~~~~^~~~~~~~
2023-05-16T23:17:34,994   moleculekit/xtc_utils/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,994     951 |     if(countmjh >= size3 ) { return -1; }
2023-05-16T23:17:34,994         |        ~~~~~~~~~^~~~~~~~
2023-05-16T23:17:34,994   moleculekit/xtc_utils/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-05-16T23:17:34,994     756 |  int smallidx,  minidx, maxidx;
2023-05-16T23:17:34,994         |                 ^~~~~~
2023-05-16T23:17:34,994   moleculekit/xtc_utils/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-05-16T23:17:34,995     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-05-16T23:17:34,995         |                         ^~~~~~
2023-05-16T23:17:34,995   moleculekit/xtc_utils/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-05-16T23:17:34,995     763 |  int errval=1;
2023-05-16T23:17:34,995         |      ^~~~~~
2023-05-16T23:17:34,996   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-05-16T23:17:34,996   moleculekit/xtc_utils/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:34,996    1011 |  if(size3>xfp->buf1size)
2023-05-16T23:17:34,996         |     ~~~~~^~~~~~~~~~~~~~
2023-05-16T23:17:34,998   moleculekit/xtc_utils/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,998    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2023-05-16T23:17:34,998         |                     ~~~~~~~~^~~~~~~
2023-05-16T23:17:34,999   moleculekit/xtc_utils/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,999    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2023-05-16T23:17:34,999         |                    ~~~~~~~~^~~~~~~
2023-05-16T23:17:34,999   moleculekit/xtc_utils/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:34,999    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2023-05-16T23:17:35,000         |                    ~~~~~~~~^~~~~~~
2023-05-16T23:17:35,001   moleculekit/xtc_utils/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:35,001    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-05-16T23:17:35,001         |                  ^
2023-05-16T23:17:35,001   moleculekit/xtc_utils/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:35,002    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-05-16T23:17:35,002         |                   ^
2023-05-16T23:17:35,005   moleculekit/xtc_utils/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:35,005    1275 |  if(tmp==(unsigned int)buf2[0])
2023-05-16T23:17:35,005         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:17:35,006   moleculekit/xtc_utils/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-05-16T23:17:35,006    1001 |  int errval;
2023-05-16T23:17:35,006         |      ^~~~~~
2023-05-16T23:17:35,008   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-05-16T23:17:35,008   moleculekit/xtc_utils/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:35,009    1316 |  if(size3>xfp->buf1size)
2023-05-16T23:17:35,009         |     ~~~~~^~~~~~~~~~~~~~
2023-05-16T23:17:35,010   moleculekit/xtc_utils/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:35,010    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-05-16T23:17:35,011         |                   ^
2023-05-16T23:17:35,013   moleculekit/xtc_utils/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-05-16T23:17:35,013    1289 |  int smallidx,  maxidx, minidx;
2023-05-16T23:17:35,013         |                         ^~~~~~
2023-05-16T23:17:35,014   moleculekit/xtc_utils/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-05-16T23:17:35,014    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-05-16T23:17:35,014         |                         ^~~~~~
2023-05-16T23:17:35,014   moleculekit/xtc_utils/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-05-16T23:17:35,014    1297 |  int errval=1;
2023-05-16T23:17:35,014         |      ^~~~~~
2023-05-16T23:17:35,015   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-05-16T23:17:35,016   moleculekit/xtc_utils/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:35,016    1513 |  if(size3>xfp->buf1size) {
2023-05-16T23:17:35,016         |     ~~~~~^~~~~~~~~~~~~~
2023-05-16T23:17:35,020   moleculekit/xtc_utils/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:35,020    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-05-16T23:17:35,020         |                  ^
2023-05-16T23:17:35,020   moleculekit/xtc_utils/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-05-16T23:17:35,020    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-05-16T23:17:35,021         |                   ^
2023-05-16T23:17:35,024   moleculekit/xtc_utils/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-05-16T23:17:35,024    1743 |  if(tmp==(unsigned int)buf2[0])
2023-05-16T23:17:35,024         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-05-16T23:17:35,024   moleculekit/xtc_utils/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-05-16T23:17:35,025    1504 |  int errval=1;
2023-05-16T23:17:35,025         |      ^~~~~~
2023-05-16T23:17:37,258   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-05-16T23:17:37,506   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o
2023-05-16T23:17:38,073   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-05-16T23:17:38,073   moleculekit/xtc_utils/src/xtc.cpp:207:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-05-16T23:17:38,073     207 |  int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-05-16T23:17:38,073         |      ^~~
2023-05-16T23:17:38,079   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-05-16T23:17:38,080   moleculekit/xtc_utils/src/xtc.cpp:418:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-05-16T23:17:38,080     418 |  int nf3 = nframes * 3;
2023-05-16T23:17:38,080         |      ^~~
2023-05-16T23:17:38,084   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-05-16T23:17:38,084   moleculekit/xtc_utils/src/xtc.cpp:491:6: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-05-16T23:17:38,085     491 |  int reading_index = 0;
2023-05-16T23:17:38,085         |      ^~~~~~~~~~~~~
2023-05-16T23:17:38,085   moleculekit/xtc_utils/src/xtc.cpp:492:6: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-05-16T23:17:38,085     492 |  int writing_index = 0;
2023-05-16T23:17:38,085         |      ^~~~~~~~~~~~~
2023-05-16T23:17:38,837   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o
2023-05-16T23:17:39,068   In file included from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
2023-05-16T23:17:39,068                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-05-16T23:17:39,068                    from /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-05-16T23:17:39,068                    from moleculekit/xtc_utils/xtc.cpp:788:
2023-05-16T23:17:39,069   /tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-05-16T23:17:39,069      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-05-16T23:17:39,069         |  ^~~~~~~
2023-05-16T23:17:53,974   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:17:54,272   building 'moleculekit.tmalign' extension
2023-05-16T23:17:54,273   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign
2023-05-16T23:17:54,274   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-05-16T23:17:54,276   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o -w
2023-05-16T23:18:23,816   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-s_rjh1k0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -w
2023-05-16T23:18:36,260   In file included from /usr/include/c++/10/vector:72,
2023-05-16T23:18:36,261                    from moleculekit/tmalign/tmalign_util.cpp:802:
2023-05-16T23:18:36,261   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-05-16T23:18:36,261   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-05-16T23:18:36,261     426 |       vector<_Tp, _Alloc>::
2023-05-16T23:18:36,261         |       ^~~~~~~~~~~~~~~~~~~
2023-05-16T23:18:36,762   In file included from /usr/include/c++/10/vector:67,
2023-05-16T23:18:36,762                    from moleculekit/tmalign/tmalign_util.cpp:802:
2023-05-16T23:18:36,763   /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject*, PyObject*)’:
2023-05-16T23:18:36,763   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-05-16T23:18:36,763    1198 |    _M_realloc_insert(end(), __x);
2023-05-16T23:18:36,763         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-05-16T23:18:36,763   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-05-16T23:18:36,763    1198 |    _M_realloc_insert(end(), __x);
2023-05-16T23:18:36,763         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-05-16T23:18:36,764   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-05-16T23:18:36,764    1198 |    _M_realloc_insert(end(), __x);
2023-05-16T23:18:36,764         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-05-16T23:18:38,833   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so
2023-05-16T23:18:39,281   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-05-16T23:18:39,281   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.6.9'
2023-05-16T23:18:39,281   installing to build/bdist.linux-armv7l/wheel
2023-05-16T23:18:39,282   running install
2023-05-16T23:18:39,307   running install_lib
2023-05-16T23:18:39,314   creating build/bdist.linux-armv7l
2023-05-16T23:18:39,315   creating build/bdist.linux-armv7l/wheel
2023-05-16T23:18:39,317   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,318   copying build/lib.linux-armv7l-cpython-39/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,320   copying build/lib.linux-armv7l-cpython-39/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,323   copying build/lib.linux-armv7l-cpython-39/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,325   copying build/lib.linux-armv7l-cpython-39/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,327   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,329   copying build/lib.linux-armv7l-cpython-39/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,331   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,333   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-05-16T23:18:39,334   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-05-16T23:18:39,349   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-05-16T23:18:39,352   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-05-16T23:18:39,354   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-05-16T23:18:39,358   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,359   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,361   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,363   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,365   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,367   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,369   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,371   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,372   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,374   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,376   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,378   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,380   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,382   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,384   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,386   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,388   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,389   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,391   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,393   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,396   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,397   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,399   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,401   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,403   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,405   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,407   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,408   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,410   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,412   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,414   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,416   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,418   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,420   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,422   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,424   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,425   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,427   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,429   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,431   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,433   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,435   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,437   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,438   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,440   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,442   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,444   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,446   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,448   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,450   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,452   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,453   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,456   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,458   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,460   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,467   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,491   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,492   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,495   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,504   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,506   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,518   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,569   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,573   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,600   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,604   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,608   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-05-16T23:18:39,640   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,642   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,644   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,646   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,648   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,650   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,652   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,654   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,655   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,657   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,659   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,661   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,663   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,665   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,667   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,669   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,671   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,673   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,675   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,677   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,679   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,681   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,683   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,685   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,687   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,688   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,690   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,692   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,694   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,696   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-05-16T23:18:39,698   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-05-16T23:18:39,699   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-05-16T23:18:39,701   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-05-16T23:18:39,892   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-05-16T23:18:39,894   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-05-16T23:18:39,897   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-05-16T23:18:39,898   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-05-16T23:18:39,901   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-05-16T23:18:39,922   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,923   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,925   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,928   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,932   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,935   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-05-16T23:18:39,936   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-05-16T23:18:39,938   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-05-16T23:18:39,941   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-05-16T23:18:39,943   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-05-16T23:18:39,945   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,948   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-05-16T23:18:39,951   copying build/lib.linux-armv7l-cpython-39/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:39,955   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:39,956   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:39,958   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-05-16T23:18:39,959   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-05-16T23:18:39,961   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-05-16T23:18:39,983   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-05-16T23:18:39,984   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-05-16T23:18:39,986   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-05-16T23:18:40,003   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-05-16T23:18:40,004   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-05-16T23:18:40,021   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-05-16T23:18:40,023   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:40,044   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:40,065   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:40,068   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:40,087   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-05-16T23:18:40,111   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-05-16T23:18:40,112   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-05-16T23:18:40,114   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-05-16T23:18:40,131   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-05-16T23:18:40,132   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-05-16T23:18:40,149   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-05-16T23:18:40,150   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-05-16T23:18:40,153   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-05-16T23:18:40,157   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-05-16T23:18:40,159   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-05-16T23:18:40,160   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-05-16T23:18:40,162   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-05-16T23:18:40,164   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-05-16T23:18:40,167   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-05-16T23:18:40,169   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-05-16T23:18:40,171   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,208   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,236   copying build/lib.linux-armv7l-cpython-39/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,245   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-05-16T23:18:40,247   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-05-16T23:18:40,251   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-05-16T23:18:40,275   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,276   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,278   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,280   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,282   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,284   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,286   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,289   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,290   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,292   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,294   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,297   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,299   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,302   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-05-16T23:18:40,303   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-05-16T23:18:40,305   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-05-16T23:18:40,306   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-05-16T23:18:40,309   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,312   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,375   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-05-16T23:18:40,376   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-05-16T23:18:40,378   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-05-16T23:18:40,381   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-05-16T23:18:40,383   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-05-16T23:18:40,386   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-05-16T23:18:40,388   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-05-16T23:18:40,389   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-05-16T23:18:40,396   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-05-16T23:18:40,419   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-05-16T23:18:40,422   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-05-16T23:18:40,423   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-05-16T23:18:40,426   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-05-16T23:18:40,428   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-05-16T23:18:40,429   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-05-16T23:18:40,454   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-05-16T23:18:40,456   copying build/lib.linux-armv7l-cpython-39/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,458   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,479   copying build/lib.linux-armv7l-cpython-39/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,484   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-05-16T23:18:40,485   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-05-16T23:18:40,487   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-05-16T23:18:40,488   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-05-16T23:18:40,490   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-05-16T23:18:40,493   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-05-16T23:18:40,496   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-05-16T23:18:40,499   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-05-16T23:18:40,500   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-05-16T23:18:40,502   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-05-16T23:18:40,505   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-05-16T23:18:40,506   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-05-16T23:18:40,507   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-05-16T23:18:40,510   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-05-16T23:18:40,512   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-05-16T23:18:40,514   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,545   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-05-16T23:18:40,546   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-05-16T23:18:40,548   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-05-16T23:18:40,551   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-05-16T23:18:40,555   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,556   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,557   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,559   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,561   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,563   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,565   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,567   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,569   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,572   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,574   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,577   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,578   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,581   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,583   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,585   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-05-16T23:18:40,587   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-05-16T23:18:40,588   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-05-16T23:18:40,609   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-05-16T23:18:40,611   copying build/lib.linux-armv7l-cpython-39/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,612   copying build/lib.linux-armv7l-cpython-39/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,614   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,616   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,647   copying build/lib.linux-armv7l-cpython-39/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,650   copying build/lib.linux-armv7l-cpython-39/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,652   copying build/lib.linux-armv7l-cpython-39/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,655   copying build/lib.linux-armv7l-cpython-39/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,658   copying build/lib.linux-armv7l-cpython-39/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,660   copying build/lib.linux-armv7l-cpython-39/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,662   copying build/lib.linux-armv7l-cpython-39/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,664   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-05-16T23:18:40,691   running install_egg_info
2023-05-16T23:18:40,699   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.6.9-py3.9.egg-info
2023-05-16T23:18:40,714   running install_scripts
2023-05-16T23:18:40,764   creating build/bdist.linux-armv7l/wheel/moleculekit-1.6.9.dist-info/WHEEL
2023-05-16T23:18:40,767   creating '/tmp/pip-wheel-d6ryray6/.tmp-o6t_t3ox/moleculekit-1.6.9-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-05-16T23:18:40,770   adding 'moleculekit/__init__.py'
2023-05-16T23:18:40,771   adding 'moleculekit/_version.py'
2023-05-16T23:18:40,773   adding 'moleculekit/align.py'
2023-05-16T23:18:41,064   adding 'moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:41,076   adding 'moleculekit/bondguesser.py'
2023-05-16T23:18:41,291   adding 'moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:41,299   adding 'moleculekit/config.py'
2023-05-16T23:18:41,301   adding 'moleculekit/dihedral.py'
2023-05-16T23:18:41,566   adding 'moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:41,576   adding 'moleculekit/home.py'
2023-05-16T23:18:41,578   adding 'moleculekit/logging.ini'
2023-05-16T23:18:41,591   adding 'moleculekit/molecule.py'
2023-05-16T23:18:41,789   adding 'moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:41,797   adding 'moleculekit/opm.py'
2023-05-16T23:18:41,799   adding 'moleculekit/periodictable.py'
2023-05-16T23:18:41,801   adding 'moleculekit/pymolgraphics.py'
2023-05-16T23:18:41,802   adding 'moleculekit/rcsb.py'
2023-05-16T23:18:41,803   adding 'moleculekit/rdkitintegration.py'
2023-05-16T23:18:41,815   adding 'moleculekit/readers.py'
2023-05-16T23:18:42,390   adding 'moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:42,414   adding 'moleculekit/util.py'
2023-05-16T23:18:42,415   adding 'moleculekit/version.py'
2023-05-16T23:18:42,417   adding 'moleculekit/viewer.py'
2023-05-16T23:18:42,418   adding 'moleculekit/vmd_wrapper'
2023-05-16T23:18:42,420   adding 'moleculekit/vmdgraphics.py'
2023-05-16T23:18:42,422   adding 'moleculekit/vmdviewer.py'
2023-05-16T23:18:42,631   adding 'moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:42,643   adding 'moleculekit/writers.py'
2023-05-16T23:18:42,879   adding 'moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:42,887   adding 'moleculekit/atomselect/__init__.py'
2023-05-16T23:18:42,889   adding 'moleculekit/atomselect/analyze.py'
2023-05-16T23:18:42,891   adding 'moleculekit/atomselect/atomselect.py'
2023-05-16T23:18:42,893   adding 'moleculekit/atomselect/languageparser.py'
2023-05-16T23:18:42,976   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-05-16T23:18:42,986   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-05-16T23:18:43,057   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-05-16T23:18:43,065   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-05-16T23:18:43,139   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-05-16T23:18:43,147   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-05-16T23:18:43,149   adding 'moleculekit/interactions/__init__.py'
2023-05-16T23:18:43,399   adding 'moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:43,634   adding 'moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:43,645   adding 'moleculekit/interactions/interactions.py'
2023-05-16T23:18:43,897   adding 'moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:44,152   adding 'moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so'
2023-05-16T23:18:44,232   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-05-16T23:18:44,239   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-05-16T23:18:44,310   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-05-16T23:18:44,318   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-05-16T23:18:44,389   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-05-16T23:18:44,397   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-05-16T23:18:44,468   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-05-16T23:18:44,476   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-05-16T23:18:44,543   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-05-16T23:18:44,550   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-05-16T23:18:44,551   adding 'moleculekit/pdbx/__init__.py'
2023-05-16T23:18:44,555   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-05-16T23:18:44,558   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-05-16T23:18:44,560   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-05-16T23:18:44,561   adding 'moleculekit/pdbx/reader/__init__.py'
2023-05-16T23:18:44,563   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-05-16T23:18:44,565   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-05-16T23:18:44,566   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-05-16T23:18:44,567   adding 'moleculekit/pdbx/tests/__init__.py'
2023-05-16T23:18:44,569   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-05-16T23:18:44,570   adding 'moleculekit/pdbx/writer/__init__.py'
2023-05-16T23:18:44,572   adding 'moleculekit/ply/__init__.py'
2023-05-16T23:18:44,576   adding 'moleculekit/ply/lex.py'
2023-05-16T23:18:44,588   adding 'moleculekit/ply/yacc.py'
2023-05-16T23:18:44,590   adding 'moleculekit/projections/__init__.py'
2023-05-16T23:18:44,592   adding 'moleculekit/projections/metriccoordinate.py'
2023-05-16T23:18:44,596   adding 'moleculekit/projections/metricdihedral.py'
2023-05-16T23:18:44,599   adding 'moleculekit/projections/metricdistance.py'
2023-05-16T23:18:44,602   adding 'moleculekit/projections/metricfluctuation.py'
2023-05-16T23:18:44,603   adding 'moleculekit/projections/metricgyration.py'
2023-05-16T23:18:44,607   adding 'moleculekit/projections/metricplumed2.py'
2023-05-16T23:18:44,609   adding 'moleculekit/projections/metricrmsd.py'
2023-05-16T23:18:44,611   adding 'moleculekit/projections/metricsasa.py'
2023-05-16T23:18:44,613   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-05-16T23:18:44,615   adding 'moleculekit/projections/metricshell.py'
2023-05-16T23:18:44,616   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-05-16T23:18:44,618   adding 'moleculekit/projections/metrictmscore.py'
2023-05-16T23:18:44,619   adding 'moleculekit/projections/projection.py'
2023-05-16T23:18:44,621   adding 'moleculekit/projections/util.py'
2023-05-16T23:18:44,623   adding 'moleculekit/share/ALA.cif'
2023-05-16T23:18:44,624   adding 'moleculekit/share/backbone.cif'
2023-05-16T23:18:45,933   adding 'moleculekit/share/opm_sequences.json'
2023-05-16T23:18:46,018   adding 'moleculekit/share/atomselect/atomselect.json'
2023-05-16T23:18:46,022   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-05-16T23:18:46,023   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-05-16T23:18:46,025   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-05-16T23:18:46,026   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-05-16T23:18:46,027   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-05-16T23:18:46,028   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-05-16T23:18:46,029   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-05-16T23:18:46,031   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-05-16T23:18:46,032   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-05-16T23:18:46,033   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-05-16T23:18:46,035   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-05-16T23:18:46,036   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-05-16T23:18:46,037   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-05-16T23:18:46,038   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-05-16T23:18:46,040   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-05-16T23:18:46,041   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-05-16T23:18:46,043   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-05-16T23:18:46,044   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-05-16T23:18:46,046   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-05-16T23:18:46,047   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-05-16T23:18:46,048   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-05-16T23:18:46,049   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-05-16T23:18:46,051   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-05-16T23:18:46,052   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-05-16T23:18:46,053   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-05-16T23:18:46,054   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-05-16T23:18:46,056   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-05-16T23:18:46,057   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-05-16T23:18:46,058   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-05-16T23:18:46,059   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-05-16T23:18:46,060   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-05-16T23:18:46,061   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-05-16T23:18:46,063   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-05-16T23:18:46,064   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-05-16T23:18:46,065   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-05-16T23:18:46,066   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-05-16T23:18:46,067   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-05-16T23:18:46,069   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-05-16T23:18:46,070   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-05-16T23:18:46,071   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-05-16T23:18:46,072   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-05-16T23:18:46,073   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-05-16T23:18:46,075   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-05-16T23:18:46,076   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-05-16T23:18:46,078   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-05-16T23:18:46,079   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-05-16T23:18:46,080   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-05-16T23:18:46,082   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-05-16T23:18:46,083   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-05-16T23:18:46,085   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-05-16T23:18:46,086   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-05-16T23:18:46,087   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-05-16T23:18:46,089   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-05-16T23:18:46,090   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-05-16T23:18:46,091   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-05-16T23:18:46,092   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-05-16T23:18:46,093   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-05-16T23:18:46,095   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-05-16T23:18:46,096   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-05-16T23:18:46,097   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-05-16T23:18:46,098   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-05-16T23:18:46,099   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-05-16T23:18:46,100   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-05-16T23:18:46,101   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-05-16T23:18:46,103   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-05-16T23:18:46,104   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-05-16T23:18:46,105   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-05-16T23:18:46,106   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-05-16T23:18:46,108   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-05-16T23:18:46,109   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-05-16T23:18:46,110   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-05-16T23:18:46,111   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-05-16T23:18:46,112   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-05-16T23:18:46,113   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-05-16T23:18:46,115   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-05-16T23:18:46,116   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-05-16T23:18:46,117   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-05-16T23:18:46,118   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-05-16T23:18:46,120   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-05-16T23:18:46,121   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-05-16T23:18:46,122   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-05-16T23:18:46,124   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-05-16T23:18:46,125   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-05-16T23:18:46,127   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-05-16T23:18:46,128   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-05-16T23:18:46,130   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-05-16T23:18:46,131   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-05-16T23:18:46,132   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-05-16T23:18:46,133   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-05-16T23:18:46,135   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-05-16T23:18:46,136   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-05-16T23:18:46,137   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-05-16T23:18:46,138   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-05-16T23:18:46,140   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-05-16T23:18:46,141   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-05-16T23:18:46,142   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-05-16T23:18:46,143   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-05-16T23:18:46,144   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-05-16T23:18:46,146   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-05-16T23:18:46,147   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-05-16T23:18:46,148   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-05-16T23:18:46,149   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-05-16T23:18:46,150   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-05-16T23:18:46,151   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-05-16T23:18:46,153   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-05-16T23:18:46,154   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-05-16T23:18:46,155   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-05-16T23:18:46,156   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-05-16T23:18:46,158   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-05-16T23:18:46,159   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-05-16T23:18:46,160   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-05-16T23:18:46,161   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-05-16T23:18:46,162   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-05-16T23:18:46,164   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-05-16T23:18:46,165   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-05-16T23:18:46,166   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-05-16T23:18:46,167   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-05-16T23:18:46,168   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-05-16T23:18:46,170   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-05-16T23:18:46,171   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-05-16T23:18:46,172   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-05-16T23:18:46,173   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-05-16T23:18:46,174   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-05-16T23:18:46,176   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-05-16T23:18:46,177   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-05-16T23:18:46,178   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-05-16T23:18:46,179   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-05-16T23:18:46,180   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-05-16T23:18:46,181   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-05-16T23:18:46,183   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-05-16T23:18:46,184   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-05-16T23:18:46,185   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-05-16T23:18:46,186   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-05-16T23:18:46,188   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-05-16T23:18:46,189   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-05-16T23:18:46,190   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-05-16T23:18:46,191   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-05-16T23:18:46,192   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-05-16T23:18:46,194   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-05-16T23:18:46,195   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-05-16T23:18:46,196   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-05-16T23:18:46,197   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-05-16T23:18:46,198   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-05-16T23:18:46,200   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-05-16T23:18:46,201   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-05-16T23:18:46,202   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-05-16T23:18:46,203   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-05-16T23:18:46,204   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-05-16T23:18:46,206   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-05-16T23:18:46,207   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-05-16T23:18:46,208   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-05-16T23:18:46,209   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-05-16T23:18:46,210   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-05-16T23:18:46,211   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-05-16T23:18:46,213   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-05-16T23:18:46,214   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-05-16T23:18:46,215   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-05-16T23:18:46,217   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-05-16T23:18:46,218   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-05-16T23:18:46,219   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-05-16T23:18:46,220   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-05-16T23:18:46,221   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-05-16T23:18:46,223   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-05-16T23:18:46,224   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-05-16T23:18:46,225   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-05-16T23:18:46,226   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-05-16T23:18:46,228   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-05-16T23:18:46,229   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-05-16T23:18:46,230   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-05-16T23:18:46,231   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-05-16T23:18:46,232   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-05-16T23:18:46,233   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-05-16T23:18:46,235   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-05-16T23:18:46,236   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-05-16T23:18:46,237   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-05-16T23:18:46,239   adding 'moleculekit/smallmol/__init__.py'
2023-05-16T23:18:46,244   adding 'moleculekit/smallmol/smallmol.py'
2023-05-16T23:18:46,246   adding 'moleculekit/smallmol/smallmollib.py'
2023-05-16T23:18:46,248   adding 'moleculekit/smallmol/test_smallmol.py'
2023-05-16T23:18:46,250   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-05-16T23:18:46,252   adding 'moleculekit/smallmol/util.py'
2023-05-16T23:18:46,254   adding 'moleculekit/smallmol/tools/__init__.py'
2023-05-16T23:18:46,255   adding 'moleculekit/smallmol/tools/clustering.py'
2023-05-16T23:18:46,257   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-05-16T23:18:46,258   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-05-16T23:18:46,328   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-05-16T23:18:46,335   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-05-16T23:18:46,337   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-05-16T23:18:46,338   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-05-16T23:18:46,356   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-05-16T23:18:46,359   adding 'moleculekit/tools/__init__.py'
2023-05-16T23:18:46,361   adding 'moleculekit/tools/atomtyper.py'
2023-05-16T23:18:46,363   adding 'moleculekit/tools/autosegment.py'
2023-05-16T23:18:46,365   adding 'moleculekit/tools/crystalpacking.py'
2023-05-16T23:18:46,368   adding 'moleculekit/tools/detect.py'
2023-05-16T23:18:46,369   adding 'moleculekit/tools/docking.py'
2023-05-16T23:18:46,371   adding 'moleculekit/tools/graphalignment.py'
2023-05-16T23:18:46,373   adding 'moleculekit/tools/hhblitsprofile.py'
2023-05-16T23:18:46,374   adding 'moleculekit/tools/moleculechecks.py'
2023-05-16T23:18:46,380   adding 'moleculekit/tools/preparation.py'
2023-05-16T23:18:46,383   adding 'moleculekit/tools/preparation_customres.py'
2023-05-16T23:18:46,385   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-05-16T23:18:46,388   adding 'moleculekit/tools/voxeldescriptors.py'
2023-05-16T23:18:46,390   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-05-16T23:18:46,391   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-05-16T23:18:46,460   adding 'moleculekit/wrapping/wrapping.cpp'
2023-05-16T23:18:46,466   adding 'moleculekit/wrapping/wrapping.pyx'
2023-05-16T23:18:46,536   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-05-16T23:18:46,543   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-05-16T23:18:46,545   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-05-16T23:18:46,548   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-05-16T23:18:46,549   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-05-16T23:18:46,550   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-05-16T23:18:46,557   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-05-16T23:18:46,559   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-05-16T23:18:46,561   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-05-16T23:18:46,563   adding 'moleculekit-1.6.9.dist-info/LICENSE'
2023-05-16T23:18:46,565   adding 'moleculekit-1.6.9.dist-info/METADATA'
2023-05-16T23:18:46,566   adding 'moleculekit-1.6.9.dist-info/WHEEL'
2023-05-16T23:18:46,566   adding 'moleculekit-1.6.9.dist-info/top_level.txt'
2023-05-16T23:18:46,571   adding 'moleculekit-1.6.9.dist-info/RECORD'
2023-05-16T23:18:46,699   removing build/bdist.linux-armv7l/wheel
2023-05-16T23:18:46,982   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-05-16T23:18:47,228   Created wheel for moleculekit: filename=moleculekit-1.6.9-cp39-cp39-linux_armv7l.whl size=11488849 sha256=8eea0a8d25cabdeab4ef1d22445ddc6a43f97ee7d818844ba405fd13182df906
2023-05-16T23:18:47,229   Stored in directory: /tmp/pip-ephem-wheel-cache-8xq77kn_/wheels/37/47/fd/1ce183a5a0e6b12aa13d1b9dac69e8d26d2ec7203ec4612216
2023-05-16T23:18:47,254 Successfully built moleculekit
2023-05-16T23:18:47,533 Removed build tracker: '/tmp/pip-build-tracker-b7l3o7k4'