2023-05-17T17:33:29,988 Created temporary directory: /tmp/pip-build-tracker-_sv23zr4 2023-05-17T17:33:29,991 Initialized build tracking at /tmp/pip-build-tracker-_sv23zr4 2023-05-17T17:33:29,991 Created build tracker: /tmp/pip-build-tracker-_sv23zr4 2023-05-17T17:33:29,991 Entered build tracker: /tmp/pip-build-tracker-_sv23zr4 2023-05-17T17:33:29,993 Created temporary directory: /tmp/pip-wheel-0ekel6vk 2023-05-17T17:33:30,001 Created temporary directory: /tmp/pip-ephem-wheel-cache-bm5md21l 2023-05-17T17:33:30,056 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-17T17:33:30,065 2 location(s) to search for versions of cwl-utils: 2023-05-17T17:33:30,065 * https://pypi.org/simple/cwl-utils/ 2023-05-17T17:33:30,065 * https://www.piwheels.org/simple/cwl-utils/ 2023-05-17T17:33:30,067 Fetching project page and analyzing links: https://pypi.org/simple/cwl-utils/ 2023-05-17T17:33:30,068 Getting page https://pypi.org/simple/cwl-utils/ 2023-05-17T17:33:30,073 Found index url https://pypi.org/simple/ 2023-05-17T17:33:30,262 Fetched page https://pypi.org/simple/cwl-utils/ as application/vnd.pypi.simple.v1+json 2023-05-17T17:33:30,287 Found link https://files.pythonhosted.org/packages/0b/d6/9e1315cdaf68c85a4d94d1aae2c1cc50af122bca762588e8ae3c297f272b/cwl-utils-0.1.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.1 2023-05-17T17:33:30,289 Found link https://files.pythonhosted.org/packages/64/ca/a591b71c37c2e9aa50766dd98c8b8c32fd51325df81086f5e60201a788c3/cwl-utils-0.2.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.2 2023-05-17T17:33:30,290 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/93/5c/a7b590dcd52f551d564704cce30a5d6e9f81b6225fb12b3bf51f87c1dada/cwl_utils-0.2-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,291 Found link 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Found link https://files.pythonhosted.org/packages/19/6e/c41ff3503335ffd4f90bdfc74e71e3803c1ecf9e58d8c5d26c869de6ce6c/cwl-utils-0.6.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.6 2023-05-17T17:33:30,297 Found link https://files.pythonhosted.org/packages/50/91/28fcb5e0d5377ab3db6800dde8e15c64dd629f13dff9051582f7078ca9af/cwl-utils-0.7.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.7 2023-05-17T17:33:30,299 Found link https://files.pythonhosted.org/packages/d3/68/559c19042fa610b775dcfe7ca7bc224f7d1de637598b7195ca091722772a/cwl-utils-0.8.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.8 2023-05-17T17:33:30,300 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/e9/bc/2a639f5084ce9f362abbe4f13006df35e371b702bd0fa11394571223b0a3/cwl_utils-0.8-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,301 Found link https://files.pythonhosted.org/packages/9a/1f/d99d30c8bc20f664466623599492829bec26e97df95fa688a1bec49b0c50/cwl-utils-0.9.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.9 2023-05-17T17:33:30,302 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/91/c6/a26a1abbbb0333bb114f8ceaab2993888427c1b1efc300980e96d47397b8/cwl_utils-0.9-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,303 Found link https://files.pythonhosted.org/packages/44/a1/ad2fc39415e0a34381e5fe82222726c50925525b62bea0c1d48789e7f764/cwl-utils-0.10.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.10 2023-05-17T17:33:30,304 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/92/ac/0e13d55c8cd91005b277b37715db1be7df4f2566da448d867e4c47ba2f0c/cwl_utils-0.10-py3-none-any.whl (from 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Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/30/1d/19cb0563509131cff2885b4612bfa68d26fb430d66fa0e082db6bc679096/cwl_utils-0.23-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,331 Found link https://files.pythonhosted.org/packages/70/f7/a203c07d932458c9238ed293a1fc1bb7c3a7f65fbe547dd1575f3fdddce2/cwl-utils-0.24.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.24 2023-05-17T17:33:30,331 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/4e/14/e0e943f4fa20e9b165550dc24fe89f4e6397bc1ab8842c6049798f7bb000/cwl_utils-0.24-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,333 Found link https://files.pythonhosted.org/packages/8c/92/962a866e178f31a718420fac141e712d78881e49840d86ce5d2e70b638e2/cwl-utils-0.25.tar.gz (from https://pypi.org/simple/cwl-utils/) 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https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.14-py3-none-any.whl#sha256=76c75d9b54a0ff5411033f46770b3a41f5c8e91c799d0f497d0ef4b0745c757e (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,591 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.13-py3-none-any.whl#sha256=730e728649e1b368cc0215a26032314ff63ed56fab99cfcd62b93deb40574874 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,591 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.12-py3-none-any.whl#sha256=07ed331c5b05460a00d0043fca891f955a09428ef54114b8c7bd0baab28d2955 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,592 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.11-py3-none-any.whl#sha256=8172d1856ac407d5e7a7d6e83d150904c8f03350420cf32a3ffd26bfa92f123e (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,592 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.10-py3-none-any.whl#sha256=af5d124f6abe87d815ef0c54e45fcf76cc64b73420d8671313d02feaa97b6827 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,593 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.9-py3-none-any.whl#sha256=2ebafb910ef170916ae8e358f09d7e10841f2829218ac0570e195dacb3bb04e8 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,593 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.8-py3-none-any.whl#sha256=f92398a0b44915ac549a2cac9def7cb046653ee5120ce5cc8f1b7da08e65318b (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,594 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.7-py3-none-any.whl#sha256=7e9cf8cf6f91b119d177fa4fb46f926b4cb4a3a152ab88fc0f0aff7196f28395 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,594 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.6-py3-none-any.whl#sha256=82f7be644023ebabc3f5c071ba9c8a2a8e67ddaefbc22c93209d6a4e7d4f2b6b (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,595 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.5-py3-none-any.whl#sha256=c6a0e6a7b31fbbb13ed1a19acda1f5799d39a2f6417ec153cf02fdca97306718 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,595 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.4-py3-none-any.whl#sha256=41c00592aaf0e80d3f312de81e1d60d9858fb128a45a2743bb58c7f8291398d1 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,596 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.3-py3-none-any.whl#sha256=64e0e094726c13419a2b0b7a1e82b8d93b3f4142625c3c4ac90c8f73b4374146 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,596 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.2-py3-none-any.whl#sha256=50d2590f63f89085c48eeccf5de1278700f73f25b2fcd9b3405feb38b4e5bcff (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,597 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.1-py3-none-any.whl#sha256=033e34d4ce8ef5c9b9fa5f5b8fbc9a5f79faec2821bac352829a8ed95c7bca9c (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-05-17T17:33:30,597 Skipping link: not a file: https://www.piwheels.org/simple/cwl-utils/ 2023-05-17T17:33:30,598 Skipping link: not a file: https://pypi.org/simple/cwl-utils/ 2023-05-17T17:33:30,643 Given no hashes to check 1 links for project 'cwl-utils': discarding no candidates 2023-05-17T17:33:30,674 Collecting cwl-utils==0.27 2023-05-17T17:33:30,679 Created temporary directory: /tmp/pip-unpack-2o8vo7py 2023-05-17T17:33:30,886 Downloading cwl-utils-0.27.tar.gz (259 kB) 2023-05-17T17:33:31,851 Added cwl-utils==0.27 from https://files.pythonhosted.org/packages/83/4a/a96286356cb8ab0c4b155a3ce65815317e7a6a4b3182b12e24581e496d42/cwl-utils-0.27.tar.gz to build tracker '/tmp/pip-build-tracker-_sv23zr4' 2023-05-17T17:33:31,854 Running setup.py (path:/tmp/pip-wheel-0ekel6vk/cwl-utils_b036464cb8404e44974a2be00335da3e/setup.py) egg_info for package cwl-utils 2023-05-17T17:33:31,855 Created temporary directory: /tmp/pip-pip-egg-info-q689oywd 2023-05-17T17:33:31,856 Preparing metadata (setup.py): started 2023-05-17T17:33:31,858 Running command python setup.py egg_info 2023-05-17T17:33:33,433 running egg_info 2023-05-17T17:33:33,436 creating /tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info 2023-05-17T17:33:33,497 writing /tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/PKG-INFO 2023-05-17T17:33:33,502 writing dependency_links to /tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/dependency_links.txt 2023-05-17T17:33:33,506 writing entry points to /tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/entry_points.txt 2023-05-17T17:33:33,509 writing requirements to /tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/requires.txt 2023-05-17T17:33:33,511 writing top-level names to /tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/top_level.txt 2023-05-17T17:33:33,514 writing manifest file '/tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/SOURCES.txt' 2023-05-17T17:33:33,724 reading manifest file '/tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/SOURCES.txt' 2023-05-17T17:33:33,727 reading manifest template 'MANIFEST.in' 2023-05-17T17:33:33,730 warning: no files found matching 'LICENSE.txt' 2023-05-17T17:33:33,743 warning: no files found matching 'testdata/*.yaml' 2023-05-17T17:33:33,764 warning: no previously-included files matching '*~' found anywhere in distribution 2023-05-17T17:33:33,766 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-17T17:33:33,785 writing manifest file '/tmp/pip-pip-egg-info-q689oywd/cwl_utils.egg-info/SOURCES.txt' 2023-05-17T17:33:33,906 Preparing metadata (setup.py): finished with status 'done' 2023-05-17T17:33:33,920 Source in /tmp/pip-wheel-0ekel6vk/cwl-utils_b036464cb8404e44974a2be00335da3e has version 0.27, which satisfies requirement cwl-utils==0.27 from https://files.pythonhosted.org/packages/83/4a/a96286356cb8ab0c4b155a3ce65815317e7a6a4b3182b12e24581e496d42/cwl-utils-0.27.tar.gz 2023-05-17T17:33:33,922 Removed cwl-utils==0.27 from https://files.pythonhosted.org/packages/83/4a/a96286356cb8ab0c4b155a3ce65815317e7a6a4b3182b12e24581e496d42/cwl-utils-0.27.tar.gz from build tracker '/tmp/pip-build-tracker-_sv23zr4' 2023-05-17T17:33:33,938 Created temporary directory: /tmp/pip-unpack-sdd1hm_1 2023-05-17T17:33:33,939 Building wheels for collected packages: cwl-utils 2023-05-17T17:33:33,947 Created temporary directory: /tmp/pip-wheel-dqkt2wxc 2023-05-17T17:33:33,948 Building wheel for cwl-utils (setup.py): started 2023-05-17T17:33:33,950 Destination directory: /tmp/pip-wheel-dqkt2wxc 2023-05-17T17:33:33,950 Running command python setup.py bdist_wheel 2023-05-17T17:33:35,620 running bdist_wheel 2023-05-17T17:33:36,330 running build 2023-05-17T17:33:36,330 running build_py 2023-05-17T17:33:36,401 creating build 2023-05-17T17:33:36,402 creating build/lib 2023-05-17T17:33:36,404 creating build/lib/cwl_utils 2023-05-17T17:33:36,406 copying cwl_utils/loghandler.py -> build/lib/cwl_utils 2023-05-17T17:33:36,410 copying cwl_utils/cwl_v1_1_expression_refactor.py -> build/lib/cwl_utils 2023-05-17T17:33:36,418 copying cwl_utils/cwl_v1_2_expression_refactor.py -> build/lib/cwl_utils 2023-05-17T17:33:36,427 copying cwl_utils/types.py -> build/lib/cwl_utils 2023-05-17T17:33:36,431 copying cwl_utils/errors.py -> build/lib/cwl_utils 2023-05-17T17:33:36,434 copying cwl_utils/docker_extract.py -> build/lib/cwl_utils 2023-05-17T17:33:36,438 copying cwl_utils/graph_split.py -> build/lib/cwl_utils 2023-05-17T17:33:36,442 copying cwl_utils/__init__.py -> build/lib/cwl_utils 2023-05-17T17:33:36,445 copying cwl_utils/cite_extract.py -> build/lib/cwl_utils 2023-05-17T17:33:36,448 copying cwl_utils/schemadef.py -> build/lib/cwl_utils 2023-05-17T17:33:36,452 copying cwl_utils/image_puller.py -> build/lib/cwl_utils 2023-05-17T17:33:36,456 copying cwl_utils/__meta__.py -> build/lib/cwl_utils 2023-05-17T17:33:36,458 copying cwl_utils/expression_refactor.py -> build/lib/cwl_utils 2023-05-17T17:33:36,462 copying cwl_utils/cwl_v1_0_expression_refactor.py -> build/lib/cwl_utils 2023-05-17T17:33:36,470 copying cwl_utils/singularity.py -> build/lib/cwl_utils 2023-05-17T17:33:36,474 copying cwl_utils/file_formats.py -> build/lib/cwl_utils 2023-05-17T17:33:36,478 copying cwl_utils/utils.py -> build/lib/cwl_utils 2023-05-17T17:33:36,482 copying cwl_utils/sandboxjs.py -> build/lib/cwl_utils 2023-05-17T17:33:36,488 copying cwl_utils/normalizer.py -> build/lib/cwl_utils 2023-05-17T17:33:36,492 copying cwl_utils/pack.py -> build/lib/cwl_utils 2023-05-17T17:33:36,497 copying cwl_utils/expression.py -> build/lib/cwl_utils 2023-05-17T17:33:36,503 creating build/lib/cwl_utils/parser 2023-05-17T17:33:36,506 copying cwl_utils/parser/cwl_v1_2.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,542 copying cwl_utils/parser/cwl_v1_1.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,575 copying cwl_utils/parser/__init__.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,580 copying cwl_utils/parser/cwl_v1_0_utils.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,584 copying cwl_utils/parser/cwl_v1_2_utils.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,589 copying cwl_utils/parser/utils.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,594 copying cwl_utils/parser/cwl_v1_1_utils.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,598 copying cwl_utils/parser/latest.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,602 copying cwl_utils/parser/cwl_v1_0.py -> build/lib/cwl_utils/parser 2023-05-17T17:33:36,635 creating build/lib/cwl_utils/tests 2023-05-17T17:33:36,638 copying tests/load_cwl_by_path.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,642 copying tests/test_packing.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,647 copying tests/test_meta.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,651 copying tests/test_cite_extract.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,655 copying tests/test_format.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,661 copying tests/util.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,665 copying tests/test_subscope.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,669 copying tests/__init__.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,672 copying tests/test_examples.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,676 copying tests/test_graph_split.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,680 copying tests/test_utils.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,683 copying tests/test_etools_to_clt.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,688 copying tests/test_js_sandbox.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,692 copying tests/test_parser_utils.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,699 copying tests/test_docker_extract.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,702 copying tests/test_parser.py -> build/lib/cwl_utils/tests 2023-05-17T17:33:36,708 running egg_info 2023-05-17T17:33:36,854 writing cwl_utils.egg-info/PKG-INFO 2023-05-17T17:33:36,858 writing dependency_links to cwl_utils.egg-info/dependency_links.txt 2023-05-17T17:33:36,862 writing entry points to cwl_utils.egg-info/entry_points.txt 2023-05-17T17:33:36,865 writing requirements to cwl_utils.egg-info/requires.txt 2023-05-17T17:33:36,868 writing top-level names to cwl_utils.egg-info/top_level.txt 2023-05-17T17:33:36,947 reading manifest file 'cwl_utils.egg-info/SOURCES.txt' 2023-05-17T17:33:36,992 reading manifest template 'MANIFEST.in' 2023-05-17T17:33:36,994 warning: no files found matching 'LICENSE.txt' 2023-05-17T17:33:37,008 warning: no files found matching 'testdata/*.yaml' 2023-05-17T17:33:37,027 warning: no previously-included files matching '*~' found anywhere in distribution 2023-05-17T17:33:37,029 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-05-17T17:33:37,055 writing manifest file 'cwl_utils.egg-info/SOURCES.txt' 2023-05-17T17:33:37,066 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'cwl_utils.testdata.checker_wf' is absent from the `packages` configuration. 2023-05-17T17:33:37,067 !! 2023-05-17T17:33:37,067 ******************************************************************************** 2023-05-17T17:33:37,068 ############################ 2023-05-17T17:33:37,068 # Package would be ignored # 2023-05-17T17:33:37,068 ############################ 2023-05-17T17:33:37,069 Python recognizes 'cwl_utils.testdata.checker_wf' as an importable package[^1], 2023-05-17T17:33:37,069 but it is absent from setuptools' `packages` configuration. 2023-05-17T17:33:37,070 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-17T17:33:37,070 package, please make sure that 'cwl_utils.testdata.checker_wf' is explicitly added 2023-05-17T17:33:37,070 to the `packages` configuration field. 2023-05-17T17:33:37,071 Alternatively, you can also rely on setuptools' discovery methods 2023-05-17T17:33:37,071 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-17T17:33:37,071 instead of `find_packages(...)`/`find:`). 2023-05-17T17:33:37,072 You can read more about "package discovery" on setuptools documentation page: 2023-05-17T17:33:37,073 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-17T17:33:37,073 If you don't want 'cwl_utils.testdata.checker_wf' to be distributed and are 2023-05-17T17:33:37,074 already explicitly excluding 'cwl_utils.testdata.checker_wf' via 2023-05-17T17:33:37,074 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-17T17:33:37,074 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-17T17:33:37,074 combination with a more fine grained `package-data` configuration. 2023-05-17T17:33:37,075 You can read more about "package data files" on setuptools documentation page: 2023-05-17T17:33:37,076 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-17T17:33:37,077 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-17T17:33:37,077 even if it does not contain any `.py` files. 2023-05-17T17:33:37,077 On the other hand, currently there is no concept of package data 2023-05-17T17:33:37,077 directory, all directories are treated like packages. 2023-05-17T17:33:37,078 ******************************************************************************** 2023-05-17T17:33:37,078 !! 2023-05-17T17:33:37,079 check.warn(importable) 2023-05-17T17:33:37,079 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'cwl_utils.testdata.types' is absent from the `packages` configuration. 2023-05-17T17:33:37,079 !! 2023-05-17T17:33:37,080 ******************************************************************************** 2023-05-17T17:33:37,080 ############################ 2023-05-17T17:33:37,081 # Package would be ignored # 2023-05-17T17:33:37,081 ############################ 2023-05-17T17:33:37,081 Python recognizes 'cwl_utils.testdata.types' as an importable package[^1], 2023-05-17T17:33:37,081 but it is absent from setuptools' `packages` configuration. 2023-05-17T17:33:37,082 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-17T17:33:37,082 package, please make sure that 'cwl_utils.testdata.types' is explicitly added 2023-05-17T17:33:37,083 to the `packages` configuration field. 2023-05-17T17:33:37,083 Alternatively, you can also rely on setuptools' discovery methods 2023-05-17T17:33:37,083 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-17T17:33:37,084 instead of `find_packages(...)`/`find:`). 2023-05-17T17:33:37,084 You can read more about "package discovery" on setuptools documentation page: 2023-05-17T17:33:37,085 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-17T17:33:37,085 If you don't want 'cwl_utils.testdata.types' to be distributed and are 2023-05-17T17:33:37,086 already explicitly excluding 'cwl_utils.testdata.types' via 2023-05-17T17:33:37,086 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-17T17:33:37,086 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-17T17:33:37,087 combination with a more fine grained `package-data` configuration. 2023-05-17T17:33:37,087 You can read more about "package data files" on setuptools documentation page: 2023-05-17T17:33:37,088 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-17T17:33:37,089 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-17T17:33:37,089 even if it does not contain any `.py` files. 2023-05-17T17:33:37,089 On the other hand, currently there is no concept of package data 2023-05-17T17:33:37,090 directory, all directories are treated like packages. 2023-05-17T17:33:37,090 ******************************************************************************** 2023-05-17T17:33:37,090 !! 2023-05-17T17:33:37,091 check.warn(importable) 2023-05-17T17:33:37,091 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'cwl_utils.testdata.workflows' is absent from the `packages` configuration. 2023-05-17T17:33:37,091 !! 2023-05-17T17:33:37,092 ******************************************************************************** 2023-05-17T17:33:37,092 ############################ 2023-05-17T17:33:37,093 # Package would be ignored # 2023-05-17T17:33:37,093 ############################ 2023-05-17T17:33:37,093 Python recognizes 'cwl_utils.testdata.workflows' as an importable package[^1], 2023-05-17T17:33:37,094 but it is absent from setuptools' `packages` configuration. 2023-05-17T17:33:37,094 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-17T17:33:37,095 package, please make sure that 'cwl_utils.testdata.workflows' is explicitly added 2023-05-17T17:33:37,095 to the `packages` configuration field. 2023-05-17T17:33:37,096 Alternatively, you can also rely on setuptools' discovery methods 2023-05-17T17:33:37,096 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-17T17:33:37,096 instead of `find_packages(...)`/`find:`). 2023-05-17T17:33:37,097 You can read more about "package discovery" on setuptools documentation page: 2023-05-17T17:33:37,098 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-17T17:33:37,098 If you don't want 'cwl_utils.testdata.workflows' to be distributed and are 2023-05-17T17:33:37,099 already explicitly excluding 'cwl_utils.testdata.workflows' via 2023-05-17T17:33:37,099 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-17T17:33:37,099 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-17T17:33:37,100 combination with a more fine grained `package-data` configuration. 2023-05-17T17:33:37,100 You can read more about "package data files" on setuptools documentation page: 2023-05-17T17:33:37,101 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-17T17:33:37,102 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-17T17:33:37,102 even if it does not contain any `.py` files. 2023-05-17T17:33:37,102 On the other hand, currently there is no concept of package data 2023-05-17T17:33:37,103 directory, all directories are treated like packages. 2023-05-17T17:33:37,103 ******************************************************************************** 2023-05-17T17:33:37,104 !! 2023-05-17T17:33:37,104 check.warn(importable) 2023-05-17T17:33:37,104 copying cwl_utils/cwlNodeEngine.js -> build/lib/cwl_utils 2023-05-17T17:33:37,105 copying cwl_utils/cwlNodeEngineJSConsole.js -> build/lib/cwl_utils 2023-05-17T17:33:37,105 copying cwl_utils/cwlNodeEngineWithContext.js -> build/lib/cwl_utils 2023-05-17T17:33:37,106 copying cwl_utils/py.typed -> build/lib/cwl_utils 2023-05-17T17:33:37,109 creating build/lib/cwl_utils/testdata 2023-05-17T17:33:37,111 copying testdata/EDAM_subset.owl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,118 copying testdata/cond-single-source-wf-003.1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,122 copying testdata/cond-single-source-wf-004.1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,126 copying testdata/cond-single-source-wf-005.1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,131 copying testdata/cond-wf-003.1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,135 copying testdata/cond-wf-004.1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,139 copying testdata/cond-wf-005.1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,143 copying testdata/count-lines6-single-source-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,147 copying testdata/count-lines6-single-source-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,151 copying testdata/count-lines6-single-source-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,154 copying testdata/count-lines6-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,158 copying testdata/count-lines6-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,162 copying testdata/count-lines6-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,166 copying testdata/count-lines7-single-source-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,170 copying testdata/count-lines7-single-source-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,174 copying testdata/count-lines7-single-source-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,179 copying testdata/count-lines7-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,183 copying testdata/count-lines7-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,186 copying testdata/count-lines7-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,190 copying testdata/debian_image_id.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,194 copying testdata/dockstore-tool-md5sum.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,199 copying testdata/dockstore-tool-md5sum_v11.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,203 copying testdata/dockstore-tool-md5sum_v12.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,207 copying testdata/echo-tool-packed.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,211 copying testdata/echo_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,215 copying testdata/echo_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,219 copying testdata/echo_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,223 copying testdata/foo-array.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,227 copying testdata/foo.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,231 copying testdata/formattest2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,235 copying testdata/formattest2_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,239 copying testdata/formattest2_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,243 copying testdata/gx_edam.ttl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,247 copying testdata/js-expr-req-wf.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,251 copying testdata/lib.js -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,255 copying testdata/md5sum.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,259 copying testdata/md5sum.input -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,263 copying testdata/md5sum_v11.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,267 copying testdata/md5sum_v12.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,270 copying testdata/record-output-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,274 copying testdata/record-output-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,278 copying testdata/record-output-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,283 copying testdata/record-output_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,286 copying testdata/record-output_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,290 copying testdata/record-output_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,294 copying testdata/scatter-wf1_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,298 copying testdata/scatter-wf1_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,302 copying testdata/scatter-wf1_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,306 copying testdata/scatter-wf2_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,310 copying testdata/scatter-wf2_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,314 copying testdata/scatter-wf2_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,318 copying testdata/scatter-wf3_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,322 copying testdata/scatter-wf3_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,326 copying testdata/scatter-wf3_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,330 copying testdata/seqtk_seq.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,334 copying testdata/stdout-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,337 copying testdata/stdout-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,341 copying testdata/stdout-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,345 copying testdata/step-valuefrom2-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,348 copying testdata/step-valuefrom2-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,352 copying testdata/step-valuefrom2-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,357 copying testdata/step-valuefrom3-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,360 copying testdata/step-valuefrom3-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,364 copying testdata/step-valuefrom3-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,368 copying testdata/step_valuefrom5_wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,372 copying testdata/step_valuefrom5_wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,375 copying testdata/step_valuefrom5_wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,379 copying testdata/step_valuefrom5_wf_with_id_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,383 copying testdata/step_valuefrom5_wf_with_id_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,387 copying testdata/step_valuefrom5_wf_with_id_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,391 copying testdata/wc3-tool_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,394 copying testdata/wc3-tool_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,398 copying testdata/wc3-tool_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,402 copying testdata/wf2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,406 copying testdata/workflow_input_format_expr.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,410 copying testdata/workflow_input_format_expr_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,414 copying testdata/workflow_input_format_expr_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,418 copying testdata/workflow_input_sf_expr.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,421 copying testdata/workflow_input_sf_expr_array.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,425 copying testdata/workflow_input_sf_expr_array_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,430 copying testdata/workflow_input_sf_expr_array_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,434 copying testdata/workflow_input_sf_expr_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,438 copying testdata/workflow_input_sf_expr_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-05-17T17:33:37,442 creating build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,443 copying testdata/checker_wf/broken-wf.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,448 copying testdata/checker_wf/broken-wf2.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,452 copying testdata/checker_wf/broken-wf3.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,456 copying testdata/checker_wf/cat.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,460 copying testdata/checker_wf/echo.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,464 copying testdata/checker_wf/functional-wf.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-05-17T17:33:37,468 creating build/lib/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:37,470 copying testdata/remote-cwl/tool1.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:37,474 copying testdata/remote-cwl/tool2.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:37,478 copying testdata/remote-cwl/wf1.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:37,482 creating build/lib/cwl_utils/testdata/types 2023-05-17T17:33:37,483 copying testdata/types/array.yml -> build/lib/cwl_utils/testdata/types 2023-05-17T17:33:37,487 copying testdata/types/recursive.yml -> build/lib/cwl_utils/testdata/types 2023-05-17T17:33:37,491 copying testdata/types/singletype.yml -> build/lib/cwl_utils/testdata/types 2023-05-17T17:33:37,495 copying testdata/types/singletype2.yml -> build/lib/cwl_utils/testdata/types 2023-05-17T17:33:37,499 copying testdata/types/testtypes.yml -> build/lib/cwl_utils/testdata/types 2023-05-17T17:33:37,503 creating build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,504 copying testdata/workflows/count-lines16-wf.cwl -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,508 copying testdata/workflows/import-in-type.cwl -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,512 copying testdata/workflows/parseInt-tool.cwl -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,516 copying testdata/workflows/scatter-wf4.cwl -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,520 copying testdata/workflows/type-import.yaml -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,524 copying testdata/workflows/wc-tool.cwl -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,528 copying testdata/workflows/wf5.cwl -> build/lib/cwl_utils/testdata/workflows 2023-05-17T17:33:37,614 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-17T17:33:37,615 !! 2023-05-17T17:33:37,615 ******************************************************************************** 2023-05-17T17:33:37,616 Please avoid running ``setup.py`` directly. 2023-05-17T17:33:37,616 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-17T17:33:37,616 other standards-based tools. 2023-05-17T17:33:37,617 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-17T17:33:37,617 ******************************************************************************** 2023-05-17T17:33:37,618 !! 2023-05-17T17:33:37,618 self.initialize_options() 2023-05-17T17:33:37,680 installing to build/bdist.linux-armv7l/wheel 2023-05-17T17:33:37,680 running install 2023-05-17T17:33:37,740 running install_lib 2023-05-17T17:33:37,807 creating build/bdist.linux-armv7l 2023-05-17T17:33:37,808 creating build/bdist.linux-armv7l/wheel 2023-05-17T17:33:37,812 creating build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,814 copying build/lib/cwl_utils/loghandler.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,819 copying build/lib/cwl_utils/cwl_v1_1_expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,828 copying build/lib/cwl_utils/cwl_v1_2_expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,839 creating build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,841 copying build/lib/cwl_utils/tests/load_cwl_by_path.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,845 copying build/lib/cwl_utils/tests/test_packing.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,849 copying build/lib/cwl_utils/tests/test_meta.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,852 copying build/lib/cwl_utils/tests/test_cite_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,856 copying build/lib/cwl_utils/tests/test_format.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,860 copying build/lib/cwl_utils/tests/util.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,864 copying build/lib/cwl_utils/tests/test_subscope.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,868 copying build/lib/cwl_utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,872 copying build/lib/cwl_utils/tests/test_examples.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,876 copying build/lib/cwl_utils/tests/test_graph_split.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,880 copying build/lib/cwl_utils/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,884 copying build/lib/cwl_utils/tests/test_etools_to_clt.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,889 copying build/lib/cwl_utils/tests/test_js_sandbox.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,894 copying build/lib/cwl_utils/tests/test_parser_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,901 copying build/lib/cwl_utils/tests/test_docker_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,905 copying build/lib/cwl_utils/tests/test_parser.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-05-17T17:33:37,910 copying build/lib/cwl_utils/types.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,914 copying build/lib/cwl_utils/errors.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,918 copying build/lib/cwl_utils/docker_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,923 copying build/lib/cwl_utils/graph_split.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,927 copying build/lib/cwl_utils/__init__.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,931 copying build/lib/cwl_utils/cite_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,934 copying build/lib/cwl_utils/cwlNodeEngineWithContext.js -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,938 copying build/lib/cwl_utils/schemadef.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,943 copying build/lib/cwl_utils/cwlNodeEngineJSConsole.js -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:37,950 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,951 copying build/lib/cwl_utils/testdata/record-output-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,955 copying build/lib/cwl_utils/testdata/cond-single-source-wf-004.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,959 copying build/lib/cwl_utils/testdata/lib.js -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,962 copying build/lib/cwl_utils/testdata/stdout-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,965 copying build/lib/cwl_utils/testdata/cond-wf-003.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,968 copying build/lib/cwl_utils/testdata/record-output-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,972 copying build/lib/cwl_utils/testdata/md5sum.input -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,975 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,978 copying build/lib/cwl_utils/testdata/echo_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,981 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,985 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum_v12.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,988 copying build/lib/cwl_utils/testdata/EDAM_subset.owl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,994 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:37,998 copying build/lib/cwl_utils/testdata/cond-single-source-wf-003.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,002 copying build/lib/cwl_utils/testdata/debian_image_id.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,006 copying build/lib/cwl_utils/testdata/workflow_input_format_expr_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,010 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,014 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,018 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,021 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,025 copying build/lib/cwl_utils/testdata/seqtk_seq.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,029 copying build/lib/cwl_utils/testdata/workflow_input_format_expr.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,034 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,036 copying build/lib/cwl_utils/testdata/workflows/scatter-wf4.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,040 copying build/lib/cwl_utils/testdata/workflows/import-in-type.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,043 copying build/lib/cwl_utils/testdata/workflows/type-import.yaml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,047 copying build/lib/cwl_utils/testdata/workflows/wc-tool.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,050 copying build/lib/cwl_utils/testdata/workflows/parseInt-tool.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,053 copying build/lib/cwl_utils/testdata/workflows/wf5.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,057 copying build/lib/cwl_utils/testdata/workflows/count-lines16-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-05-17T17:33:38,060 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,063 copying build/lib/cwl_utils/testdata/wc3-tool_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,067 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,070 copying build/lib/cwl_utils/testdata/record-output_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,074 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum_v11.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,077 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,082 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-05-17T17:33:38,083 copying build/lib/cwl_utils/testdata/types/recursive.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-05-17T17:33:38,087 copying build/lib/cwl_utils/testdata/types/testtypes.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-05-17T17:33:38,091 copying build/lib/cwl_utils/testdata/types/singletype.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-05-17T17:33:38,094 copying build/lib/cwl_utils/testdata/types/singletype2.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-05-17T17:33:38,097 copying build/lib/cwl_utils/testdata/types/array.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-05-17T17:33:38,101 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,105 copying build/lib/cwl_utils/testdata/md5sum_v12.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,108 copying build/lib/cwl_utils/testdata/cond-wf-005.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,111 copying build/lib/cwl_utils/testdata/wc3-tool_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,115 copying build/lib/cwl_utils/testdata/wf2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,118 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,122 copying build/lib/cwl_utils/testdata/formattest2_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,125 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,128 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,131 copying build/lib/cwl_utils/testdata/workflow_input_format_expr_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,135 copying build/lib/cwl_utils/testdata/js-expr-req-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,139 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:38,141 copying build/lib/cwl_utils/testdata/remote-cwl/wf1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:38,145 copying build/lib/cwl_utils/testdata/remote-cwl/tool1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:38,149 copying build/lib/cwl_utils/testdata/remote-cwl/tool2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-05-17T17:33:38,152 copying build/lib/cwl_utils/testdata/wc3-tool_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,156 copying build/lib/cwl_utils/testdata/md5sum_v11.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,159 copying build/lib/cwl_utils/testdata/cond-wf-004.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,162 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,166 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,170 copying build/lib/cwl_utils/testdata/stdout-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,173 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,177 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,180 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,184 copying build/lib/cwl_utils/testdata/record-output_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,187 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,191 copying build/lib/cwl_utils/testdata/cond-single-source-wf-005.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,194 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,198 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,201 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,205 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,209 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,212 copying build/lib/cwl_utils/testdata/formattest2_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,216 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,220 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,223 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,227 copying build/lib/cwl_utils/testdata/record-output-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,231 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,234 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,238 copying build/lib/cwl_utils/testdata/foo.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,241 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,245 copying build/lib/cwl_utils/testdata/record-output_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,249 copying build/lib/cwl_utils/testdata/foo-array.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,252 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,255 copying build/lib/cwl_utils/testdata/md5sum.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,259 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,263 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,267 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,270 copying build/lib/cwl_utils/testdata/echo_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,274 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,278 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,280 copying build/lib/cwl_utils/testdata/checker_wf/echo.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,284 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,288 copying build/lib/cwl_utils/testdata/checker_wf/functional-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,291 copying build/lib/cwl_utils/testdata/checker_wf/cat.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,295 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf3.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,299 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-05-17T17:33:38,302 copying build/lib/cwl_utils/testdata/echo-tool-packed.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,306 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,310 copying build/lib/cwl_utils/testdata/gx_edam.ttl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,313 copying build/lib/cwl_utils/testdata/stdout-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,317 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,320 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,324 copying build/lib/cwl_utils/testdata/formattest2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,327 copying build/lib/cwl_utils/testdata/echo_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,331 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-05-17T17:33:38,334 copying build/lib/cwl_utils/image_puller.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,338 copying build/lib/cwl_utils/__meta__.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,342 copying build/lib/cwl_utils/expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,346 copying build/lib/cwl_utils/cwl_v1_0_expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,354 copying build/lib/cwl_utils/singularity.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,358 copying build/lib/cwl_utils/file_formats.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,362 copying build/lib/cwl_utils/utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,367 creating build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,369 copying build/lib/cwl_utils/parser/cwl_v1_2.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,406 copying build/lib/cwl_utils/parser/cwl_v1_1.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,438 copying build/lib/cwl_utils/parser/__init__.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,443 copying build/lib/cwl_utils/parser/cwl_v1_0_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,448 copying build/lib/cwl_utils/parser/cwl_v1_2_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,452 copying build/lib/cwl_utils/parser/utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,457 copying build/lib/cwl_utils/parser/cwl_v1_1_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,462 copying build/lib/cwl_utils/parser/latest.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,466 copying build/lib/cwl_utils/parser/cwl_v1_0.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-05-17T17:33:38,495 copying build/lib/cwl_utils/sandboxjs.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,500 copying build/lib/cwl_utils/normalizer.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,504 copying build/lib/cwl_utils/pack.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,509 copying build/lib/cwl_utils/expression.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,514 copying build/lib/cwl_utils/py.typed -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,517 copying build/lib/cwl_utils/cwlNodeEngine.js -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-05-17T17:33:38,521 running install_egg_info 2023-05-17T17:33:38,596 Copying cwl_utils.egg-info to build/bdist.linux-armv7l/wheel/cwl_utils-0.27-py3.7.egg-info 2023-05-17T17:33:38,622 running install_scripts 2023-05-17T17:33:38,663 creating build/bdist.linux-armv7l/wheel/cwl_utils-0.27.dist-info/WHEEL 2023-05-17T17:33:38,668 creating '/tmp/pip-wheel-dqkt2wxc/cwl_utils-0.27-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-17T17:33:38,674 adding 'cwl_utils/__init__.py' 2023-05-17T17:33:38,676 adding 'cwl_utils/__meta__.py' 2023-05-17T17:33:38,679 adding 'cwl_utils/cite_extract.py' 2023-05-17T17:33:38,682 adding 'cwl_utils/cwlNodeEngine.js' 2023-05-17T17:33:38,684 adding 'cwl_utils/cwlNodeEngineJSConsole.js' 2023-05-17T17:33:38,687 adding 'cwl_utils/cwlNodeEngineWithContext.js' 2023-05-17T17:33:38,707 adding 'cwl_utils/cwl_v1_0_expression_refactor.py' 2023-05-17T17:33:38,728 adding 'cwl_utils/cwl_v1_1_expression_refactor.py' 2023-05-17T17:33:38,751 adding 'cwl_utils/cwl_v1_2_expression_refactor.py' 2023-05-17T17:33:38,756 adding 'cwl_utils/docker_extract.py' 2023-05-17T17:33:38,758 adding 'cwl_utils/errors.py' 2023-05-17T17:33:38,762 adding 'cwl_utils/expression.py' 2023-05-17T17:33:38,766 adding 'cwl_utils/expression_refactor.py' 2023-05-17T17:33:38,769 adding 'cwl_utils/file_formats.py' 2023-05-17T17:33:38,773 adding 'cwl_utils/graph_split.py' 2023-05-17T17:33:38,776 adding 'cwl_utils/image_puller.py' 2023-05-17T17:33:38,778 adding 'cwl_utils/loghandler.py' 2023-05-17T17:33:38,782 adding 'cwl_utils/normalizer.py' 2023-05-17T17:33:38,785 adding 'cwl_utils/pack.py' 2023-05-17T17:33:38,788 adding 'cwl_utils/py.typed' 2023-05-17T17:33:38,794 adding 'cwl_utils/sandboxjs.py' 2023-05-17T17:33:38,798 adding 'cwl_utils/schemadef.py' 2023-05-17T17:33:38,801 adding 'cwl_utils/singularity.py' 2023-05-17T17:33:38,803 adding 'cwl_utils/types.py' 2023-05-17T17:33:38,807 adding 'cwl_utils/utils.py' 2023-05-17T17:33:38,812 adding 'cwl_utils/parser/__init__.py' 2023-05-17T17:33:38,880 adding 'cwl_utils/parser/cwl_v1_0.py' 2023-05-17T17:33:38,895 adding 'cwl_utils/parser/cwl_v1_0_utils.py' 2023-05-17T17:33:38,989 adding 'cwl_utils/parser/cwl_v1_1.py' 2023-05-17T17:33:39,006 adding 'cwl_utils/parser/cwl_v1_1_utils.py' 2023-05-17T17:33:39,093 adding 'cwl_utils/parser/cwl_v1_2.py' 2023-05-17T17:33:39,111 adding 'cwl_utils/parser/cwl_v1_2_utils.py' 2023-05-17T17:33:39,114 adding 'cwl_utils/parser/latest.py' 2023-05-17T17:33:39,118 adding 'cwl_utils/parser/utils.py' 2023-05-17T17:33:39,131 adding 'cwl_utils/testdata/EDAM_subset.owl' 2023-05-17T17:33:39,135 adding 'cwl_utils/testdata/cond-single-source-wf-003.1.cwl' 2023-05-17T17:33:39,137 adding 'cwl_utils/testdata/cond-single-source-wf-004.1.cwl' 2023-05-17T17:33:39,140 adding 'cwl_utils/testdata/cond-single-source-wf-005.1.cwl' 2023-05-17T17:33:39,142 adding 'cwl_utils/testdata/cond-wf-003.1.cwl' 2023-05-17T17:33:39,145 adding 'cwl_utils/testdata/cond-wf-004.1.cwl' 2023-05-17T17:33:39,147 adding 'cwl_utils/testdata/cond-wf-005.1.cwl' 2023-05-17T17:33:39,150 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_0.cwl' 2023-05-17T17:33:39,152 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_1.cwl' 2023-05-17T17:33:39,155 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_2.cwl' 2023-05-17T17:33:39,157 adding 'cwl_utils/testdata/count-lines6-wf_v1_0.cwl' 2023-05-17T17:33:39,159 adding 'cwl_utils/testdata/count-lines6-wf_v1_1.cwl' 2023-05-17T17:33:39,162 adding 'cwl_utils/testdata/count-lines6-wf_v1_2.cwl' 2023-05-17T17:33:39,164 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_0.cwl' 2023-05-17T17:33:39,167 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_1.cwl' 2023-05-17T17:33:39,169 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_2.cwl' 2023-05-17T17:33:39,171 adding 'cwl_utils/testdata/count-lines7-wf_v1_0.cwl' 2023-05-17T17:33:39,174 adding 'cwl_utils/testdata/count-lines7-wf_v1_1.cwl' 2023-05-17T17:33:39,176 adding 'cwl_utils/testdata/count-lines7-wf_v1_2.cwl' 2023-05-17T17:33:39,179 adding 'cwl_utils/testdata/debian_image_id.cwl' 2023-05-17T17:33:39,181 adding 'cwl_utils/testdata/dockstore-tool-md5sum.cwl' 2023-05-17T17:33:39,184 adding 'cwl_utils/testdata/dockstore-tool-md5sum_v11.cwl' 2023-05-17T17:33:39,187 adding 'cwl_utils/testdata/dockstore-tool-md5sum_v12.cwl' 2023-05-17T17:33:39,189 adding 'cwl_utils/testdata/echo-tool-packed.cwl' 2023-05-17T17:33:39,192 adding 'cwl_utils/testdata/echo_v1_0.cwl' 2023-05-17T17:33:39,194 adding 'cwl_utils/testdata/echo_v1_1.cwl' 2023-05-17T17:33:39,196 adding 'cwl_utils/testdata/echo_v1_2.cwl' 2023-05-17T17:33:39,199 adding 'cwl_utils/testdata/foo-array.cwl' 2023-05-17T17:33:39,201 adding 'cwl_utils/testdata/foo.cwl' 2023-05-17T17:33:39,204 adding 'cwl_utils/testdata/formattest2.cwl' 2023-05-17T17:33:39,206 adding 'cwl_utils/testdata/formattest2_v1_0.cwl' 2023-05-17T17:33:39,209 adding 'cwl_utils/testdata/formattest2_v1_1.cwl' 2023-05-17T17:33:39,211 adding 'cwl_utils/testdata/gx_edam.ttl' 2023-05-17T17:33:39,214 adding 'cwl_utils/testdata/js-expr-req-wf.cwl' 2023-05-17T17:33:39,216 adding 'cwl_utils/testdata/lib.js' 2023-05-17T17:33:39,218 adding 'cwl_utils/testdata/md5sum.cwl' 2023-05-17T17:33:39,221 adding 'cwl_utils/testdata/md5sum.input' 2023-05-17T17:33:39,223 adding 'cwl_utils/testdata/md5sum_v11.cwl' 2023-05-17T17:33:39,225 adding 'cwl_utils/testdata/md5sum_v12.cwl' 2023-05-17T17:33:39,228 adding 'cwl_utils/testdata/record-output-wf_v1_0.cwl' 2023-05-17T17:33:39,230 adding 'cwl_utils/testdata/record-output-wf_v1_1.cwl' 2023-05-17T17:33:39,233 adding 'cwl_utils/testdata/record-output-wf_v1_2.cwl' 2023-05-17T17:33:39,235 adding 'cwl_utils/testdata/record-output_v1_0.cwl' 2023-05-17T17:33:39,238 adding 'cwl_utils/testdata/record-output_v1_1.cwl' 2023-05-17T17:33:39,240 adding 'cwl_utils/testdata/record-output_v1_2.cwl' 2023-05-17T17:33:39,243 adding 'cwl_utils/testdata/scatter-wf1_v1_0.cwl' 2023-05-17T17:33:39,245 adding 'cwl_utils/testdata/scatter-wf1_v1_1.cwl' 2023-05-17T17:33:39,248 adding 'cwl_utils/testdata/scatter-wf1_v1_2.cwl' 2023-05-17T17:33:39,251 adding 'cwl_utils/testdata/scatter-wf2_v1_0.cwl' 2023-05-17T17:33:39,253 adding 'cwl_utils/testdata/scatter-wf2_v1_1.cwl' 2023-05-17T17:33:39,256 adding 'cwl_utils/testdata/scatter-wf2_v1_2.cwl' 2023-05-17T17:33:39,258 adding 'cwl_utils/testdata/scatter-wf3_v1_0.cwl' 2023-05-17T17:33:39,261 adding 'cwl_utils/testdata/scatter-wf3_v1_1.cwl' 2023-05-17T17:33:39,263 adding 'cwl_utils/testdata/scatter-wf3_v1_2.cwl' 2023-05-17T17:33:39,266 adding 'cwl_utils/testdata/seqtk_seq.cwl' 2023-05-17T17:33:39,268 adding 'cwl_utils/testdata/stdout-wf_v1_0.cwl' 2023-05-17T17:33:39,271 adding 'cwl_utils/testdata/stdout-wf_v1_1.cwl' 2023-05-17T17:33:39,273 adding 'cwl_utils/testdata/stdout-wf_v1_2.cwl' 2023-05-17T17:33:39,275 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_0.cwl' 2023-05-17T17:33:39,278 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_1.cwl' 2023-05-17T17:33:39,281 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_2.cwl' 2023-05-17T17:33:39,283 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_0.cwl' 2023-05-17T17:33:39,286 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_1.cwl' 2023-05-17T17:33:39,288 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_2.cwl' 2023-05-17T17:33:39,291 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_0.cwl' 2023-05-17T17:33:39,293 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_1.cwl' 2023-05-17T17:33:39,296 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_2.cwl' 2023-05-17T17:33:39,299 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_0.cwl' 2023-05-17T17:33:39,301 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_1.cwl' 2023-05-17T17:33:39,304 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_2.cwl' 2023-05-17T17:33:39,306 adding 'cwl_utils/testdata/wc3-tool_v1_0.cwl' 2023-05-17T17:33:39,309 adding 'cwl_utils/testdata/wc3-tool_v1_1.cwl' 2023-05-17T17:33:39,311 adding 'cwl_utils/testdata/wc3-tool_v1_2.cwl' 2023-05-17T17:33:39,314 adding 'cwl_utils/testdata/wf2.cwl' 2023-05-17T17:33:39,316 adding 'cwl_utils/testdata/workflow_input_format_expr.cwl' 2023-05-17T17:33:39,319 adding 'cwl_utils/testdata/workflow_input_format_expr_v1_1.cwl' 2023-05-17T17:33:39,322 adding 'cwl_utils/testdata/workflow_input_format_expr_v1_2.cwl' 2023-05-17T17:33:39,324 adding 'cwl_utils/testdata/workflow_input_sf_expr.cwl' 2023-05-17T17:33:39,327 adding 'cwl_utils/testdata/workflow_input_sf_expr_array.cwl' 2023-05-17T17:33:39,329 adding 'cwl_utils/testdata/workflow_input_sf_expr_array_v1_1.cwl' 2023-05-17T17:33:39,332 adding 'cwl_utils/testdata/workflow_input_sf_expr_array_v1_2.cwl' 2023-05-17T17:33:39,334 adding 'cwl_utils/testdata/workflow_input_sf_expr_v1_1.cwl' 2023-05-17T17:33:39,337 adding 'cwl_utils/testdata/workflow_input_sf_expr_v1_2.cwl' 2023-05-17T17:33:39,341 adding 'cwl_utils/testdata/checker_wf/broken-wf.cwl' 2023-05-17T17:33:39,343 adding 'cwl_utils/testdata/checker_wf/broken-wf2.cwl' 2023-05-17T17:33:39,346 adding 'cwl_utils/testdata/checker_wf/broken-wf3.cwl' 2023-05-17T17:33:39,348 adding 'cwl_utils/testdata/checker_wf/cat.cwl' 2023-05-17T17:33:39,351 adding 'cwl_utils/testdata/checker_wf/echo.cwl' 2023-05-17T17:33:39,353 adding 'cwl_utils/testdata/checker_wf/functional-wf.cwl' 2023-05-17T17:33:39,357 adding 'cwl_utils/testdata/remote-cwl/tool1.cwl' 2023-05-17T17:33:39,359 adding 'cwl_utils/testdata/remote-cwl/tool2.cwl' 2023-05-17T17:33:39,362 adding 'cwl_utils/testdata/remote-cwl/wf1.cwl' 2023-05-17T17:33:39,366 adding 'cwl_utils/testdata/types/array.yml' 2023-05-17T17:33:39,368 adding 'cwl_utils/testdata/types/recursive.yml' 2023-05-17T17:33:39,370 adding 'cwl_utils/testdata/types/singletype.yml' 2023-05-17T17:33:39,373 adding 'cwl_utils/testdata/types/singletype2.yml' 2023-05-17T17:33:39,375 adding 'cwl_utils/testdata/types/testtypes.yml' 2023-05-17T17:33:39,379 adding 'cwl_utils/testdata/workflows/count-lines16-wf.cwl' 2023-05-17T17:33:39,381 adding 'cwl_utils/testdata/workflows/import-in-type.cwl' 2023-05-17T17:33:39,384 adding 'cwl_utils/testdata/workflows/parseInt-tool.cwl' 2023-05-17T17:33:39,387 adding 'cwl_utils/testdata/workflows/scatter-wf4.cwl' 2023-05-17T17:33:39,389 adding 'cwl_utils/testdata/workflows/type-import.yaml' 2023-05-17T17:33:39,392 adding 'cwl_utils/testdata/workflows/wc-tool.cwl' 2023-05-17T17:33:39,394 adding 'cwl_utils/testdata/workflows/wf5.cwl' 2023-05-17T17:33:39,398 adding 'cwl_utils/tests/__init__.py' 2023-05-17T17:33:39,401 adding 'cwl_utils/tests/load_cwl_by_path.py' 2023-05-17T17:33:39,403 adding 'cwl_utils/tests/test_cite_extract.py' 2023-05-17T17:33:39,406 adding 'cwl_utils/tests/test_docker_extract.py' 2023-05-17T17:33:39,410 adding 'cwl_utils/tests/test_etools_to_clt.py' 2023-05-17T17:33:39,412 adding 'cwl_utils/tests/test_examples.py' 2023-05-17T17:33:39,415 adding 'cwl_utils/tests/test_format.py' 2023-05-17T17:33:39,418 adding 'cwl_utils/tests/test_graph_split.py' 2023-05-17T17:33:39,421 adding 'cwl_utils/tests/test_js_sandbox.py' 2023-05-17T17:33:39,424 adding 'cwl_utils/tests/test_meta.py' 2023-05-17T17:33:39,427 adding 'cwl_utils/tests/test_packing.py' 2023-05-17T17:33:39,430 adding 'cwl_utils/tests/test_parser.py' 2023-05-17T17:33:39,436 adding 'cwl_utils/tests/test_parser_utils.py' 2023-05-17T17:33:39,440 adding 'cwl_utils/tests/test_subscope.py' 2023-05-17T17:33:39,442 adding 'cwl_utils/tests/test_utils.py' 2023-05-17T17:33:39,445 adding 'cwl_utils/tests/util.py' 2023-05-17T17:33:39,451 adding 'cwl_utils-0.27.dist-info/METADATA' 2023-05-17T17:33:39,453 adding 'cwl_utils-0.27.dist-info/WHEEL' 2023-05-17T17:33:39,455 adding 'cwl_utils-0.27.dist-info/entry_points.txt' 2023-05-17T17:33:39,457 adding 'cwl_utils-0.27.dist-info/top_level.txt' 2023-05-17T17:33:39,464 adding 'cwl_utils-0.27.dist-info/RECORD' 2023-05-17T17:33:39,480 removing build/bdist.linux-armv7l/wheel 2023-05-17T17:33:39,709 Building wheel for cwl-utils (setup.py): finished with status 'done' 2023-05-17T17:33:39,727 Created wheel for cwl-utils: filename=cwl_utils-0.27-py3-none-any.whl size=309248 sha256=925215db38708ca4ed95166ba0ecdeed68065060d70f1ba41541ab97e30e64e2 2023-05-17T17:33:39,729 Stored in directory: /tmp/pip-ephem-wheel-cache-bm5md21l/wheels/a6/16/6d/eb993d226eeb3cda63abad2d923fb00099300a9cde2918a12f 2023-05-17T17:33:39,770 Successfully built cwl-utils 2023-05-17T17:33:39,813 Removed build tracker: '/tmp/pip-build-tracker-_sv23zr4'