2023-05-23T12:05:13,128 Created temporary directory: /tmp/pip-build-tracker-fm2jqpy2 2023-05-23T12:05:13,132 Initialized build tracking at /tmp/pip-build-tracker-fm2jqpy2 2023-05-23T12:05:13,132 Created build tracker: /tmp/pip-build-tracker-fm2jqpy2 2023-05-23T12:05:13,132 Entered build tracker: /tmp/pip-build-tracker-fm2jqpy2 2023-05-23T12:05:13,134 Created temporary directory: /tmp/pip-wheel-bdda_gxb 2023-05-23T12:05:13,142 Created temporary directory: /tmp/pip-ephem-wheel-cache-tu4tg9o2 2023-05-23T12:05:13,194 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-23T12:05:13,202 2 location(s) to search for versions of simba-ml: 2023-05-23T12:05:13,202 * https://pypi.org/simple/simba-ml/ 2023-05-23T12:05:13,202 * https://www.piwheels.org/simple/simba-ml/ 2023-05-23T12:05:13,203 Fetching project page and analyzing links: https://pypi.org/simple/simba-ml/ 2023-05-23T12:05:13,204 Getting page https://pypi.org/simple/simba-ml/ 2023-05-23T12:05:13,208 Found index url https://pypi.org/simple/ 2023-05-23T12:05:13,392 Fetched page https://pypi.org/simple/simba-ml/ as application/vnd.pypi.simple.v1+json 2023-05-23T12:05:13,403 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/34/ce/8d95cd497712488dd271c83826df69db5fcd4445d9c874348523772b7039/simba_ml-1.0.0a1-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,404 Found link https://files.pythonhosted.org/packages/53/2c/8e19c5b852856db2152a70ab4066a41a944be34c7f5af1af8f8c3aea1522/simba_ml-1.0.0a1.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0a1 2023-05-23T12:05:13,405 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/18/e1/d0ceff7f5b36c69bf49a9f32d97fa32642501c2eed10740c59060b2a715c/simba_ml-1.0.0a2-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,406 Found link https://files.pythonhosted.org/packages/27/88/84703e15aabb3a54383e17201643296672f254c7f303b8ce29a3161af1d1/simba_ml-1.0.0a2.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0a2 2023-05-23T12:05:13,406 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/26/81/e02e09ed6cc862a989cd6a084b21d145654d1ed8be6d933eabe86349bc01/simba_ml-1.0.0a3-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,407 Found link https://files.pythonhosted.org/packages/22/44/23f2eae8da6c5cc1fa3eb3c7c9dc821d82f39095749e3bde020034c890e3/simba_ml-1.0.0a3.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0a3 2023-05-23T12:05:13,407 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/84/ef/a9eb9abe5f344883c5957488ea9ea97578911ed20ecc2389491bb6ed8a83/simba_ml-1.0.0a4-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,408 Found link https://files.pythonhosted.org/packages/16/11/30649e538a0018a2cbdc2979ed67b8658ce19dd8b43e7260b2d98e6751a2/simba_ml-1.0.0a4.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0a4 2023-05-23T12:05:13,409 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/a5/c7/ffa43f4b48fec0e4b2158a4266c26103b9fa51f53a04b615b1419349cce6/simba_ml-1.0.0a5-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,409 Found link https://files.pythonhosted.org/packages/27/f2/2c643b8a890ee6432cee08f9b1de728cb56fb8fe241800140798a5c4a661/simba_ml-1.0.0a5.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0a5 2023-05-23T12:05:13,410 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/a1/fb/b7d0b596b08a3e777ed9cdad481942454b4f8fa97f8e40356720e2edfd04/simba_ml-1.0.0a6-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,410 Found link https://files.pythonhosted.org/packages/25/96/87486468cb9894d00c26651b5c6d14b68c40ac68411c963f4c80512c3948/simba_ml-1.0.0a6.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0a6 2023-05-23T12:05:13,411 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/a9/0b/c3a311a406f0acb91c18f7bf9ff40805dd51fbcc34c783dc15ce013bba61/simba_ml-1.0.0rc1-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,412 Found link https://files.pythonhosted.org/packages/ac/ac/99ec696444a5bb1035a2401e4e58d586ccfede38dd76205eab0e73f0c680/simba_ml-1.0.0rc1.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0rc1 2023-05-23T12:05:13,412 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/ca/45/8fc07d25f9d06e4ade19feaf8d33749187c7aeed8760b6e98b4ff126af3f/simba_ml-1.0.0rc2-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,413 Found link https://files.pythonhosted.org/packages/6d/2f/287c8854ff0fb499e66c775c2b063e7d028672c455f652e2da2e51611221/simba_ml-1.0.0rc2.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0rc2 2023-05-23T12:05:13,414 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/de/ed/72a2173179d06b86dfdd8f34e93fce11e3de62252d61a6bc32f293c18b10/simba_ml-1.0.0rc3-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,414 Found link https://files.pythonhosted.org/packages/00/16/3db1001ab1916c256d29effac9b67e47e5f46697f6c86472f02344819064/simba_ml-1.0.0rc3.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0rc3 2023-05-23T12:05:13,415 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/c7/42/b9f0ee419a8461664df9d94463621178a19914c2e17866b5c0e6a55b7bc9/simba_ml-1.0.0rc5-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,415 Found link https://files.pythonhosted.org/packages/f8/10/a6c468a65e9eb74cc4da0fc8ee58dbc9f6d38b3a220820134f64130c458c/simba_ml-1.0.0rc5.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0rc5 2023-05-23T12:05:13,416 Skipping link: No binaries permitted for simba-ml: https://files.pythonhosted.org/packages/7e/5e/d2941ff68b092b29dc1d43c7e80d6523e13029109bb729c04f7de73b12fc/simba_ml-1.0.0rc6-py3-none-any.whl (from https://pypi.org/simple/simba-ml/) 2023-05-23T12:05:13,417 Found link https://files.pythonhosted.org/packages/19/ae/7e948e9888a9f49815d4cd75217bf6c4919adc235eafd116081c91746868/simba_ml-1.0.0rc6.tar.gz (from https://pypi.org/simple/simba-ml/), version: 1.0.0rc6 2023-05-23T12:05:13,418 Fetching project page and analyzing links: https://www.piwheels.org/simple/simba-ml/ 2023-05-23T12:05:13,418 Getting page https://www.piwheels.org/simple/simba-ml/ 2023-05-23T12:05:13,421 Found index url https://www.piwheels.org/simple/ 2023-05-23T12:05:13,700 Fetched page https://www.piwheels.org/simple/simba-ml/ as text/html 2023-05-23T12:05:13,709 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0rc5-py3-none-any.whl#sha256=83c9a82d423c907a8c60b6b11f9ab3943122acb9b0d845fecc789c12db42caa8 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,710 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0rc3-py3-none-any.whl#sha256=8383af682d8cc161d67628485277fb502cb69482fead1b01d8b1d72d1552216c (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,711 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0rc2-py3-none-any.whl#sha256=ffcb75b5775c07a179d3681629f694f9fd649e9658fca350af9766ca59767c5f (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,711 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0rc1-py3-none-any.whl#sha256=8347a826278589e2b4e7a148b6fe4f7247fb3c5f153641b924156228f37cad65 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,712 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0a6-py3-none-any.whl#sha256=161f9f131b2a614f568bbb33201f4a4baa24ef079c5e5afab963d9f1ce7ead5e (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,712 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0a5-py3-none-any.whl#sha256=d4b5d6070cbb2879ce4bc9b48c0ba1ce2fd7ea32d5eec16706d0e91c54e9e138 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,713 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0a4-py3-none-any.whl#sha256=bd8f8d2f736b2d8d9a19333d0e90aa26a638e5e9d1f35753c7d4c85f38c638d8 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,713 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0a3-py3-none-any.whl#sha256=cf445dc5e52a8b091ffa52851460dda822ce403ab767e16df090743eb4760c11 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,714 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0a2-py3-none-any.whl#sha256=76454cfb76aa51c75d7762cf9af23f3b244103476184a9f49397c3187e447158 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,714 Skipping link: No binaries permitted for simba-ml: https://www.piwheels.org/simple/simba-ml/simba_ml-1.0.0a1-py3-none-any.whl#sha256=9e6febd4bf4ed94a8c1068af3edc34e55e25c6b33323d43939bfd5fb5b0845e7 (from https://www.piwheels.org/simple/simba-ml/) 2023-05-23T12:05:13,715 Skipping link: not a file: https://www.piwheels.org/simple/simba-ml/ 2023-05-23T12:05:13,715 Skipping link: not a file: https://pypi.org/simple/simba-ml/ 2023-05-23T12:05:13,753 Given no hashes to check 1 links for project 'simba-ml': discarding no candidates 2023-05-23T12:05:13,783 Collecting simba-ml==1.0.0rc6 2023-05-23T12:05:13,788 Created temporary directory: /tmp/pip-unpack-gq4s0_36 2023-05-23T12:05:13,992 Downloading simba_ml-1.0.0rc6.tar.gz (71 kB) 2023-05-23T12:05:14,642 Added simba-ml==1.0.0rc6 from https://files.pythonhosted.org/packages/19/ae/7e948e9888a9f49815d4cd75217bf6c4919adc235eafd116081c91746868/simba_ml-1.0.0rc6.tar.gz to build tracker '/tmp/pip-build-tracker-fm2jqpy2' 2023-05-23T12:05:14,654 Created temporary directory: /tmp/pip-build-env-qfmf650s 2023-05-23T12:05:14,675 Installing build dependencies: started 2023-05-23T12:05:14,677 Running command pip subprocess to install build dependencies 2023-05-23T12:05:17,399 Using pip 23.1.2 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-05-23T12:05:18,165 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-23T12:05:22,235 Collecting setuptools>=42 2023-05-23T12:05:22,490 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.8.0-py3-none-any.whl (1.1 MB) 2023-05-23T12:05:23,122 Collecting wheel==0.30.0 2023-05-23T12:05:23,178 Downloading https://www.piwheels.org/simple/wheel/wheel-0.30.0-py2.py3-none-any.whl (49 kB) 2023-05-23T12:05:23,225 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 49.8/49.8 kB 1.9 MB/s eta 0:00:00 2023-05-23T12:05:23,432 Collecting versioneer-518 2023-05-23T12:05:23,466 Using cached https://www.piwheels.org/simple/versioneer-518/versioneer_518-0.19-py2.py3-none-any.whl (17 kB) 2023-05-23T12:05:28,002 Installing collected packages: wheel, versioneer-518, setuptools 2023-05-23T12:05:28,327 Creating /tmp/pip-build-env-qfmf650s/overlay/bin 2023-05-23T12:05:28,331 changing mode of /tmp/pip-build-env-qfmf650s/overlay/bin/wheel to 755 2023-05-23T12:05:32,680 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2023-05-23T12:05:32,681 scikit-build 0.17.4 requires wheel>=0.32.0, but you have wheel 0.30.0 which is incompatible. 2023-05-23T12:05:32,682 Successfully installed setuptools-67.8.0 versioneer-518-0.19 wheel-0.30.0 2023-05-23T12:05:33,135 Installing build dependencies: finished with status 'done' 2023-05-23T12:05:33,146 Getting requirements to build wheel: started 2023-05-23T12:05:33,149 Running command Getting requirements to build wheel 2023-05-23T12:05:34,799 Warning: build in /tmp/pip-build-env-qfmf650s/overlay/lib/python3.7/site-packages is using versioneer.py from /tmp/pip-wheel-bdda_gxb/simba-ml_1445191230044b70af42716728558ba0/versioneer.py 2023-05-23T12:05:34,800 1.0.0rc6 2023-05-23T12:05:34,800 running egg_info 2023-05-23T12:05:34,811 writing simba_ml.egg-info/PKG-INFO 2023-05-23T12:05:34,815 writing dependency_links to simba_ml.egg-info/dependency_links.txt 2023-05-23T12:05:34,818 writing entry points to simba_ml.egg-info/entry_points.txt 2023-05-23T12:05:34,821 writing requirements to simba_ml.egg-info/requires.txt 2023-05-23T12:05:34,824 writing top-level names to simba_ml.egg-info/top_level.txt 2023-05-23T12:05:34,899 reading manifest file 'simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:34,911 reading manifest template 'MANIFEST.in' 2023-05-23T12:05:34,936 writing manifest file 'simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:35,056 Getting requirements to build wheel: finished with status 'done' 2023-05-23T12:05:35,076 Created temporary directory: /tmp/pip-modern-metadata-a_ty_rzu 2023-05-23T12:05:35,082 Preparing metadata (pyproject.toml): started 2023-05-23T12:05:35,084 Running command Preparing metadata (pyproject.toml) 2023-05-23T12:05:36,469 Warning: build in /tmp/pip-build-env-qfmf650s/overlay/lib/python3.7/site-packages is using versioneer.py from /tmp/pip-wheel-bdda_gxb/simba-ml_1445191230044b70af42716728558ba0/versioneer.py 2023-05-23T12:05:36,471 1.0.0rc6 2023-05-23T12:05:36,471 running dist_info 2023-05-23T12:05:36,496 creating /tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info 2023-05-23T12:05:36,506 writing /tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/PKG-INFO 2023-05-23T12:05:36,510 writing dependency_links to /tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/dependency_links.txt 2023-05-23T12:05:36,514 writing entry points to /tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/entry_points.txt 2023-05-23T12:05:36,517 writing requirements to /tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/requires.txt 2023-05-23T12:05:36,519 writing top-level names to /tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/top_level.txt 2023-05-23T12:05:36,522 writing manifest file '/tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:36,596 reading manifest file '/tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:36,601 reading manifest template 'MANIFEST.in' 2023-05-23T12:05:36,620 writing manifest file '/tmp/pip-modern-metadata-a_ty_rzu/simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:36,622 creating '/tmp/pip-modern-metadata-a_ty_rzu/simba_ml-1.0.0rc6.dist-info' 2023-05-23T12:05:37,089 Preparing metadata (pyproject.toml): finished with status 'done' 2023-05-23T12:05:37,104 Source in /tmp/pip-wheel-bdda_gxb/simba-ml_1445191230044b70af42716728558ba0 has version 1.0.0rc6, which satisfies requirement simba-ml==1.0.0rc6 from https://files.pythonhosted.org/packages/19/ae/7e948e9888a9f49815d4cd75217bf6c4919adc235eafd116081c91746868/simba_ml-1.0.0rc6.tar.gz 2023-05-23T12:05:37,106 Removed simba-ml==1.0.0rc6 from https://files.pythonhosted.org/packages/19/ae/7e948e9888a9f49815d4cd75217bf6c4919adc235eafd116081c91746868/simba_ml-1.0.0rc6.tar.gz from build tracker '/tmp/pip-build-tracker-fm2jqpy2' 2023-05-23T12:05:37,116 Created temporary directory: /tmp/pip-unpack-lqwqxjjp 2023-05-23T12:05:37,117 Building wheels for collected packages: simba-ml 2023-05-23T12:05:37,125 Created temporary directory: /tmp/pip-wheel-qcjfxo7o 2023-05-23T12:05:37,126 Destination directory: /tmp/pip-wheel-qcjfxo7o 2023-05-23T12:05:37,131 Building wheel for simba-ml (pyproject.toml): started 2023-05-23T12:05:37,133 Running command Building wheel for simba-ml (pyproject.toml) 2023-05-23T12:05:38,735 Warning: build in /tmp/pip-build-env-qfmf650s/overlay/lib/python3.7/site-packages is using versioneer.py from /tmp/pip-wheel-bdda_gxb/simba-ml_1445191230044b70af42716728558ba0/versioneer.py 2023-05-23T12:05:38,736 1.0.0rc6 2023-05-23T12:05:38,737 running bdist_wheel 2023-05-23T12:05:38,767 running build 2023-05-23T12:05:38,768 running build_py 2023-05-23T12:05:38,783 Warning: build in /tmp/pip-build-env-qfmf650s/overlay/lib/python3.7/site-packages is using versioneer.py from /tmp/pip-wheel-bdda_gxb/simba-ml_1445191230044b70af42716728558ba0/versioneer.py 2023-05-23T12:05:38,784 Warning: build in /tmp/pip-build-env-qfmf650s/overlay/lib/python3.7/site-packages is using versioneer.py from /tmp/pip-wheel-bdda_gxb/simba-ml_1445191230044b70af42716728558ba0/versioneer.py 2023-05-23T12:05:38,784 creating build 2023-05-23T12:05:38,786 creating build/lib 2023-05-23T12:05:38,787 creating build/lib/simba_ml 2023-05-23T12:05:38,790 copying simba_ml/error_handler.py -> build/lib/simba_ml 2023-05-23T12:05:38,795 copying simba_ml/_version.py -> build/lib/simba_ml 2023-05-23T12:05:38,799 copying simba_ml/__init__.py -> build/lib/simba_ml 2023-05-23T12:05:38,804 creating build/lib/simba_ml/simulation 2023-05-23T12:05:38,806 copying simba_ml/simulation/species.py -> build/lib/simba_ml/simulation 2023-05-23T12:05:38,810 copying simba_ml/simulation/__init__.py -> build/lib/simba_ml/simulation 2023-05-23T12:05:38,816 creating build/lib/simba_ml/prediction 2023-05-23T12:05:38,819 copying simba_ml/prediction/plugin_loader.py -> build/lib/simba_ml/prediction 2023-05-23T12:05:38,823 copying simba_ml/prediction/preprocessing.py -> build/lib/simba_ml/prediction 2023-05-23T12:05:38,826 copying simba_ml/prediction/export.py -> build/lib/simba_ml/prediction 2023-05-23T12:05:38,830 copying simba_ml/prediction/__init__.py -> build/lib/simba_ml/prediction 2023-05-23T12:05:38,833 copying simba_ml/prediction/normalizer.py -> build/lib/simba_ml/prediction 2023-05-23T12:05:38,838 creating build/lib/simba_ml/cli 2023-05-23T12:05:38,839 copying simba_ml/cli/generate_data.py -> build/lib/simba_ml/cli 2023-05-23T12:05:38,843 copying simba_ml/cli/__main__.py -> build/lib/simba_ml/cli 2023-05-23T12:05:38,846 copying simba_ml/cli/__init__.py -> build/lib/simba_ml/cli 2023-05-23T12:05:38,849 copying simba_ml/cli/start_prediction.py -> build/lib/simba_ml/cli 2023-05-23T12:05:38,854 creating build/lib/simba_ml/example_problems 2023-05-23T12:05:38,856 copying simba_ml/example_problems/sird.py -> build/lib/simba_ml/example_problems 2023-05-23T12:05:38,860 copying simba_ml/example_problems/sir.py -> build/lib/simba_ml/example_problems 2023-05-23T12:05:38,863 copying simba_ml/example_problems/trigonometry.py -> build/lib/simba_ml/example_problems 2023-05-23T12:05:38,867 copying simba_ml/example_problems/salt_and_brine_tanks.py -> build/lib/simba_ml/example_problems 2023-05-23T12:05:38,870 copying simba_ml/example_problems/constant_function.py -> build/lib/simba_ml/example_problems 2023-05-23T12:05:38,873 copying simba_ml/example_problems/__init__.py -> build/lib/simba_ml/example_problems 2023-05-23T12:05:38,878 creating build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,879 copying simba_ml/simulation/derivative_noiser/multi_deriv_noiser.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,883 copying simba_ml/simulation/derivative_noiser/additive_deriv_noiser.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,886 copying simba_ml/simulation/derivative_noiser/__init__.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,890 copying simba_ml/simulation/derivative_noiser/derivative_noiser.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,893 copying simba_ml/simulation/derivative_noiser/sequential_deriv_noiser.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,896 copying simba_ml/simulation/derivative_noiser/no_deriv_noiser.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,899 copying simba_ml/simulation/derivative_noiser/multiplicative_deriv_noiser.py -> build/lib/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:38,904 creating build/lib/simba_ml/simulation/system_model 2023-05-23T12:05:38,906 copying simba_ml/simulation/system_model/system_model_interface.py -> build/lib/simba_ml/simulation/system_model 2023-05-23T12:05:38,909 copying simba_ml/simulation/system_model/system_model.py -> build/lib/simba_ml/simulation/system_model 2023-05-23T12:05:38,914 copying simba_ml/simulation/system_model/__init__.py -> build/lib/simba_ml/simulation/system_model 2023-05-23T12:05:38,919 creating build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,921 copying simba_ml/simulation/distributions/vector_distribution.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,924 copying simba_ml/simulation/distributions/lognormal_distribution.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,929 copying simba_ml/simulation/distributions/distribution.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,932 copying simba_ml/simulation/distributions/beta_distribution.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,935 copying simba_ml/simulation/distributions/constant.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,939 copying simba_ml/simulation/distributions/normal_distribution.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,942 copying simba_ml/simulation/distributions/__init__.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,946 copying simba_ml/simulation/distributions/helper_functions.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,949 copying simba_ml/simulation/distributions/continuous_uniform_distribution.py -> build/lib/simba_ml/simulation/distributions 2023-05-23T12:05:38,954 creating build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,955 copying simba_ml/simulation/sparsifier/sequential_sparsifier.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,959 copying simba_ml/simulation/sparsifier/constant_suffix_remover.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,963 copying simba_ml/simulation/sparsifier/random_sample_sparsifier.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,966 copying simba_ml/simulation/sparsifier/keep_extreme_values_sparsifier.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,969 copying simba_ml/simulation/sparsifier/no_sparsifier.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,972 copying simba_ml/simulation/sparsifier/sparsifier.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,975 copying simba_ml/simulation/sparsifier/__init__.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,979 copying simba_ml/simulation/sparsifier/interval_sparsifier.py -> build/lib/simba_ml/simulation/sparsifier 2023-05-23T12:05:38,985 creating build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:38,987 copying simba_ml/simulation/noisers/sequential_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:38,990 copying simba_ml/simulation/noisers/multiplicative_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:38,994 copying simba_ml/simulation/noisers/multi_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:38,998 copying simba_ml/simulation/noisers/elastic_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,002 copying simba_ml/simulation/noisers/noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,005 copying simba_ml/simulation/noisers/no_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,008 copying simba_ml/simulation/noisers/additive_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,011 copying simba_ml/simulation/noisers/column_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,014 copying simba_ml/simulation/noisers/__init__.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,017 copying simba_ml/simulation/noisers/adjusting_mean_noiser.py -> build/lib/simba_ml/simulation/noisers 2023-05-23T12:05:39,023 creating build/lib/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,024 copying simba_ml/simulation/kinetic_parameters/kinetic_parameter.py -> build/lib/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,028 copying simba_ml/simulation/kinetic_parameters/function_based_kinetic_parameter.py -> build/lib/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,031 copying simba_ml/simulation/kinetic_parameters/dict_based_kinetic_parameter.py -> build/lib/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,034 copying simba_ml/simulation/kinetic_parameters/constant_kinetic_parameter.py -> build/lib/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,038 copying simba_ml/simulation/kinetic_parameters/__init__.py -> build/lib/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,043 creating build/lib/simba_ml/simulation/constraints 2023-05-23T12:05:39,044 copying simba_ml/simulation/constraints/keep_species_sum.py -> build/lib/simba_ml/simulation/constraints 2023-05-23T12:05:39,048 copying simba_ml/simulation/constraints/species_value_truncator.py -> build/lib/simba_ml/simulation/constraints 2023-05-23T12:05:39,051 copying simba_ml/simulation/constraints/species_value_in_range.py -> build/lib/simba_ml/simulation/constraints 2023-05-23T12:05:39,055 copying simba_ml/simulation/constraints/__init__.py -> build/lib/simba_ml/simulation/constraints 2023-05-23T12:05:39,058 copying simba_ml/simulation/constraints/constraint.py -> build/lib/simba_ml/simulation/constraints 2023-05-23T12:05:39,064 creating build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,066 copying simba_ml/simulation/generators/pertubation_generator.py -> build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,070 copying simba_ml/simulation/generators/time_series_generator.py -> build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,074 copying simba_ml/simulation/generators/generator_interface.py -> build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,077 copying simba_ml/simulation/generators/steady_state_generator.py -> build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,082 copying simba_ml/simulation/generators/__init__.py -> build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,086 copying simba_ml/simulation/generators/time_points_generator.py -> build/lib/simba_ml/simulation/generators 2023-05-23T12:05:39,091 creating build/lib/simba_ml/prediction/time_series 2023-05-23T12:05:39,093 copying simba_ml/prediction/time_series/__init__.py -> build/lib/simba_ml/prediction/time_series 2023-05-23T12:05:39,098 creating build/lib/simba_ml/prediction/steady_state 2023-05-23T12:05:39,100 copying simba_ml/prediction/steady_state/__init__.py -> build/lib/simba_ml/prediction/steady_state 2023-05-23T12:05:39,106 creating build/lib/simba_ml/prediction/logging 2023-05-23T12:05:39,108 copying simba_ml/prediction/logging/logging_config.py -> build/lib/simba_ml/prediction/logging 2023-05-23T12:05:39,112 copying simba_ml/prediction/logging/__init__.py -> build/lib/simba_ml/prediction/logging 2023-05-23T12:05:39,116 copying simba_ml/prediction/logging/wandb_logger.py -> build/lib/simba_ml/prediction/logging 2023-05-23T12:05:39,121 creating build/lib/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,123 copying simba_ml/prediction/time_series/metrics/factory.py -> build/lib/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,127 copying simba_ml/prediction/time_series/metrics/__init__.py -> build/lib/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,131 copying simba_ml/prediction/time_series/metrics/metrics.py -> build/lib/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,138 creating build/lib/simba_ml/prediction/time_series/config 2023-05-23T12:05:39,140 copying simba_ml/prediction/time_series/config/time_series_config.py -> build/lib/simba_ml/prediction/time_series/config 2023-05-23T12:05:39,144 copying simba_ml/prediction/time_series/config/__init__.py -> build/lib/simba_ml/prediction/time_series/config 2023-05-23T12:05:39,150 creating build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,152 copying simba_ml/prediction/time_series/models/transfer_learning_factory.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,157 copying simba_ml/prediction/time_series/models/last_value_predictor.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,161 copying simba_ml/prediction/time_series/models/model_to_transfer_learning_model.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,165 copying simba_ml/prediction/time_series/models/model.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,168 copying simba_ml/prediction/time_series/models/transfer_learning_model.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,172 copying simba_ml/prediction/time_series/models/factory.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,176 copying simba_ml/prediction/time_series/models/average_predictor.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,180 copying simba_ml/prediction/time_series/models/__init__.py -> build/lib/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,186 creating build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,188 copying simba_ml/prediction/time_series/data_loader/transfer_learning_data_loader.py -> build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,193 copying simba_ml/prediction/time_series/data_loader/mixed_data_loader.py -> build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,198 copying simba_ml/prediction/time_series/data_loader/window_generator.py -> build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,202 copying simba_ml/prediction/time_series/data_loader/__init__.py -> build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,206 copying simba_ml/prediction/time_series/data_loader/synthetic_data_loader.py -> build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,209 copying simba_ml/prediction/time_series/data_loader/splits.py -> build/lib/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,215 creating build/lib/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:39,217 copying simba_ml/prediction/time_series/pipelines/mixed_data_pipeline.py -> build/lib/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:39,222 copying simba_ml/prediction/time_series/pipelines/transfer_learning_pipeline.py -> build/lib/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:39,227 copying simba_ml/prediction/time_series/pipelines/synthetic_data_pipeline.py -> build/lib/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:39,231 copying simba_ml/prediction/time_series/pipelines/__init__.py -> build/lib/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:39,237 creating build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,239 copying simba_ml/prediction/time_series/config/synthetic_data_pipeline/pipeline_config.py -> build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,243 copying simba_ml/prediction/time_series/config/synthetic_data_pipeline/__init__.py -> build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,247 copying simba_ml/prediction/time_series/config/synthetic_data_pipeline/data_config.py -> build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,252 creating build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,255 copying simba_ml/prediction/time_series/config/mixed_data_pipeline/pipeline_config.py -> build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,259 copying simba_ml/prediction/time_series/config/mixed_data_pipeline/__init__.py -> build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,263 copying simba_ml/prediction/time_series/config/mixed_data_pipeline/data_config.py -> build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,268 creating build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,270 copying simba_ml/prediction/time_series/config/transfer_learning_pipeline/pipeline_config.py -> build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,275 copying simba_ml/prediction/time_series/config/transfer_learning_pipeline/__init__.py -> build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,278 copying simba_ml/prediction/time_series/config/transfer_learning_pipeline/data_config.py -> build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,284 creating build/lib/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,286 copying simba_ml/prediction/time_series/models/keras/dense_neural_network.py -> build/lib/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,290 copying simba_ml/prediction/time_series/models/keras/keras_model.py -> build/lib/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,295 copying simba_ml/prediction/time_series/models/keras/__init__.py -> build/lib/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,300 creating build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,303 copying simba_ml/prediction/time_series/models/sk_learn/decision_tree_regressor.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,307 copying simba_ml/prediction/time_series/models/sk_learn/sk_learn_model.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,311 copying simba_ml/prediction/time_series/models/sk_learn/support_vector_machine_regressor.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,315 copying simba_ml/prediction/time_series/models/sk_learn/linear_regressor.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,318 copying simba_ml/prediction/time_series/models/sk_learn/random_forest_regressor.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,322 copying simba_ml/prediction/time_series/models/sk_learn/nearest_neighbors_regressor.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,325 copying simba_ml/prediction/time_series/models/sk_learn/__init__.py -> build/lib/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,330 creating build/lib/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,332 copying simba_ml/prediction/time_series/models/pytorch_lightning/pytorch_lightning_model.py -> build/lib/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,336 copying simba_ml/prediction/time_series/models/pytorch_lightning/dense_neural_network.py -> build/lib/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,340 copying simba_ml/prediction/time_series/models/pytorch_lightning/__init__.py -> build/lib/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,344 creating build/lib/simba_ml/prediction/steady_state/config 2023-05-23T12:05:39,346 copying simba_ml/prediction/steady_state/config/steady_state_data_config.py -> build/lib/simba_ml/prediction/steady_state/config 2023-05-23T12:05:39,349 copying simba_ml/prediction/steady_state/config/__init__.py -> build/lib/simba_ml/prediction/steady_state/config 2023-05-23T12:05:39,354 creating build/lib/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:39,356 copying simba_ml/prediction/steady_state/data_loader/mixed_data_loader.py -> build/lib/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:39,360 copying simba_ml/prediction/steady_state/data_loader/dataset_generator.py -> build/lib/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:39,363 copying simba_ml/prediction/steady_state/data_loader/__init__.py -> build/lib/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:39,366 copying simba_ml/prediction/steady_state/data_loader/splits.py -> build/lib/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:39,371 creating build/lib/simba_ml/cli/problem_viewer 2023-05-23T12:05:39,373 copying simba_ml/cli/problem_viewer/problem_viewer.py -> build/lib/simba_ml/cli/problem_viewer 2023-05-23T12:05:39,376 copying simba_ml/cli/problem_viewer/run_problem_viewer.py -> build/lib/simba_ml/cli/problem_viewer 2023-05-23T12:05:39,380 copying simba_ml/cli/problem_viewer/__init__.py -> build/lib/simba_ml/cli/problem_viewer 2023-05-23T12:05:39,469 UPDATING build/lib/simba_ml/_version.py 2023-05-23T12:05:39,469 set build/lib/simba_ml/_version.py to '1.0.0rc6' 2023-05-23T12:05:39,470 installing to build/bdist.linux-armv7l/wheel 2023-05-23T12:05:39,470 running install 2023-05-23T12:05:39,534 running install_lib 2023-05-23T12:05:39,550 creating build/bdist.linux-armv7l 2023-05-23T12:05:39,551 creating build/bdist.linux-armv7l/wheel 2023-05-23T12:05:39,554 creating build/bdist.linux-armv7l/wheel/simba_ml 2023-05-23T12:05:39,556 copying build/lib/simba_ml/error_handler.py -> build/bdist.linux-armv7l/wheel/simba_ml 2023-05-23T12:05:39,561 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation 2023-05-23T12:05:39,563 copying build/lib/simba_ml/simulation/species.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation 2023-05-23T12:05:39,568 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,570 copying build/lib/simba_ml/simulation/derivative_noiser/multi_deriv_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,574 copying build/lib/simba_ml/simulation/derivative_noiser/additive_deriv_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,577 copying build/lib/simba_ml/simulation/derivative_noiser/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,580 copying build/lib/simba_ml/simulation/derivative_noiser/derivative_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,584 copying build/lib/simba_ml/simulation/derivative_noiser/sequential_deriv_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,587 copying build/lib/simba_ml/simulation/derivative_noiser/no_deriv_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,591 copying build/lib/simba_ml/simulation/derivative_noiser/multiplicative_deriv_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/derivative_noiser 2023-05-23T12:05:39,596 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/system_model 2023-05-23T12:05:39,597 copying build/lib/simba_ml/simulation/system_model/system_model_interface.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/system_model 2023-05-23T12:05:39,601 copying build/lib/simba_ml/simulation/system_model/system_model.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/system_model 2023-05-23T12:05:39,606 copying build/lib/simba_ml/simulation/system_model/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/system_model 2023-05-23T12:05:39,610 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,612 copying build/lib/simba_ml/simulation/distributions/vector_distribution.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,616 copying build/lib/simba_ml/simulation/distributions/lognormal_distribution.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,619 copying build/lib/simba_ml/simulation/distributions/distribution.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,623 copying build/lib/simba_ml/simulation/distributions/beta_distribution.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,626 copying build/lib/simba_ml/simulation/distributions/constant.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,629 copying build/lib/simba_ml/simulation/distributions/normal_distribution.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,633 copying build/lib/simba_ml/simulation/distributions/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,636 copying build/lib/simba_ml/simulation/distributions/helper_functions.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,640 copying build/lib/simba_ml/simulation/distributions/continuous_uniform_distribution.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/distributions 2023-05-23T12:05:39,644 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,646 copying build/lib/simba_ml/simulation/sparsifier/sequential_sparsifier.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,650 copying build/lib/simba_ml/simulation/sparsifier/constant_suffix_remover.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,653 copying build/lib/simba_ml/simulation/sparsifier/random_sample_sparsifier.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,656 copying build/lib/simba_ml/simulation/sparsifier/keep_extreme_values_sparsifier.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,660 copying build/lib/simba_ml/simulation/sparsifier/no_sparsifier.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,663 copying build/lib/simba_ml/simulation/sparsifier/sparsifier.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,667 copying build/lib/simba_ml/simulation/sparsifier/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,670 copying build/lib/simba_ml/simulation/sparsifier/interval_sparsifier.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/sparsifier 2023-05-23T12:05:39,675 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,677 copying build/lib/simba_ml/simulation/noisers/sequential_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,681 copying build/lib/simba_ml/simulation/noisers/multiplicative_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,684 copying build/lib/simba_ml/simulation/noisers/multi_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,688 copying build/lib/simba_ml/simulation/noisers/elastic_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,691 copying build/lib/simba_ml/simulation/noisers/noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,695 copying build/lib/simba_ml/simulation/noisers/no_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,698 copying build/lib/simba_ml/simulation/noisers/additive_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,702 copying build/lib/simba_ml/simulation/noisers/column_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,705 copying build/lib/simba_ml/simulation/noisers/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,709 copying build/lib/simba_ml/simulation/noisers/adjusting_mean_noiser.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/noisers 2023-05-23T12:05:39,713 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,715 copying build/lib/simba_ml/simulation/kinetic_parameters/kinetic_parameter.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,719 copying build/lib/simba_ml/simulation/kinetic_parameters/function_based_kinetic_parameter.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,722 copying build/lib/simba_ml/simulation/kinetic_parameters/dict_based_kinetic_parameter.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,726 copying build/lib/simba_ml/simulation/kinetic_parameters/constant_kinetic_parameter.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,729 copying build/lib/simba_ml/simulation/kinetic_parameters/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/kinetic_parameters 2023-05-23T12:05:39,734 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/constraints 2023-05-23T12:05:39,736 copying build/lib/simba_ml/simulation/constraints/keep_species_sum.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/constraints 2023-05-23T12:05:39,739 copying build/lib/simba_ml/simulation/constraints/species_value_truncator.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/constraints 2023-05-23T12:05:39,743 copying build/lib/simba_ml/simulation/constraints/species_value_in_range.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/constraints 2023-05-23T12:05:39,747 copying build/lib/simba_ml/simulation/constraints/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/constraints 2023-05-23T12:05:39,750 copying build/lib/simba_ml/simulation/constraints/constraint.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/constraints 2023-05-23T12:05:39,754 copying build/lib/simba_ml/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation 2023-05-23T12:05:39,758 creating build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,760 copying build/lib/simba_ml/simulation/generators/pertubation_generator.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,764 copying build/lib/simba_ml/simulation/generators/time_series_generator.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,768 copying build/lib/simba_ml/simulation/generators/generator_interface.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,771 copying build/lib/simba_ml/simulation/generators/steady_state_generator.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,786 copying build/lib/simba_ml/simulation/generators/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,790 copying build/lib/simba_ml/simulation/generators/time_points_generator.py -> build/bdist.linux-armv7l/wheel/simba_ml/simulation/generators 2023-05-23T12:05:39,794 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction 2023-05-23T12:05:39,797 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series 2023-05-23T12:05:39,800 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,802 copying build/lib/simba_ml/prediction/time_series/metrics/factory.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,806 copying build/lib/simba_ml/prediction/time_series/metrics/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,810 copying build/lib/simba_ml/prediction/time_series/metrics/metrics.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/metrics 2023-05-23T12:05:39,816 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config 2023-05-23T12:05:39,819 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,821 copying build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline/pipeline_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,825 copying build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,829 copying build/lib/simba_ml/prediction/time_series/config/synthetic_data_pipeline/data_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/synthetic_data_pipeline 2023-05-23T12:05:39,833 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,835 copying build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline/pipeline_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,839 copying build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,842 copying build/lib/simba_ml/prediction/time_series/config/mixed_data_pipeline/data_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/mixed_data_pipeline 2023-05-23T12:05:39,847 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,848 copying build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline/pipeline_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,852 copying build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,856 copying build/lib/simba_ml/prediction/time_series/config/transfer_learning_pipeline/data_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config/transfer_learning_pipeline 2023-05-23T12:05:39,859 copying build/lib/simba_ml/prediction/time_series/config/time_series_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config 2023-05-23T12:05:39,862 copying build/lib/simba_ml/prediction/time_series/config/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/config 2023-05-23T12:05:39,867 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,869 copying build/lib/simba_ml/prediction/time_series/models/transfer_learning_factory.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,873 copying build/lib/simba_ml/prediction/time_series/models/last_value_predictor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,877 copying build/lib/simba_ml/prediction/time_series/models/model_to_transfer_learning_model.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,882 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,883 copying build/lib/simba_ml/prediction/time_series/models/keras/dense_neural_network.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,887 copying build/lib/simba_ml/prediction/time_series/models/keras/keras_model.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,892 copying build/lib/simba_ml/prediction/time_series/models/keras/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/keras 2023-05-23T12:05:39,895 copying build/lib/simba_ml/prediction/time_series/models/model.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,900 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,902 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/decision_tree_regressor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,906 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/sk_learn_model.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,910 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/support_vector_machine_regressor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,914 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/linear_regressor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,918 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/random_forest_regressor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,922 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/nearest_neighbors_regressor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,926 copying build/lib/simba_ml/prediction/time_series/models/sk_learn/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/sk_learn 2023-05-23T12:05:39,931 copying build/lib/simba_ml/prediction/time_series/models/transfer_learning_model.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,936 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,938 copying build/lib/simba_ml/prediction/time_series/models/pytorch_lightning/pytorch_lightning_model.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,944 copying build/lib/simba_ml/prediction/time_series/models/pytorch_lightning/dense_neural_network.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,948 copying build/lib/simba_ml/prediction/time_series/models/pytorch_lightning/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models/pytorch_lightning 2023-05-23T12:05:39,952 copying build/lib/simba_ml/prediction/time_series/models/factory.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,956 copying build/lib/simba_ml/prediction/time_series/models/average_predictor.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,960 copying build/lib/simba_ml/prediction/time_series/models/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/models 2023-05-23T12:05:39,965 copying build/lib/simba_ml/prediction/time_series/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series 2023-05-23T12:05:39,970 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,972 copying build/lib/simba_ml/prediction/time_series/data_loader/transfer_learning_data_loader.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,977 copying build/lib/simba_ml/prediction/time_series/data_loader/mixed_data_loader.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,982 copying build/lib/simba_ml/prediction/time_series/data_loader/window_generator.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,986 copying build/lib/simba_ml/prediction/time_series/data_loader/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,990 copying build/lib/simba_ml/prediction/time_series/data_loader/synthetic_data_loader.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:39,994 copying build/lib/simba_ml/prediction/time_series/data_loader/splits.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/data_loader 2023-05-23T12:05:40,000 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:40,002 copying build/lib/simba_ml/prediction/time_series/pipelines/mixed_data_pipeline.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:40,007 copying build/lib/simba_ml/prediction/time_series/pipelines/transfer_learning_pipeline.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:40,012 copying build/lib/simba_ml/prediction/time_series/pipelines/synthetic_data_pipeline.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:40,016 copying build/lib/simba_ml/prediction/time_series/pipelines/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/time_series/pipelines 2023-05-23T12:05:40,020 copying build/lib/simba_ml/prediction/plugin_loader.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction 2023-05-23T12:05:40,023 copying build/lib/simba_ml/prediction/preprocessing.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction 2023-05-23T12:05:40,026 copying build/lib/simba_ml/prediction/export.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction 2023-05-23T12:05:40,031 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state 2023-05-23T12:05:40,034 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/config 2023-05-23T12:05:40,035 copying build/lib/simba_ml/prediction/steady_state/config/steady_state_data_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/config 2023-05-23T12:05:40,039 copying build/lib/simba_ml/prediction/steady_state/config/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/config 2023-05-23T12:05:40,043 copying build/lib/simba_ml/prediction/steady_state/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state 2023-05-23T12:05:40,047 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:40,049 copying build/lib/simba_ml/prediction/steady_state/data_loader/mixed_data_loader.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:40,053 copying build/lib/simba_ml/prediction/steady_state/data_loader/dataset_generator.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:40,057 copying build/lib/simba_ml/prediction/steady_state/data_loader/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:40,061 copying build/lib/simba_ml/prediction/steady_state/data_loader/splits.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/steady_state/data_loader 2023-05-23T12:05:40,065 copying build/lib/simba_ml/prediction/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction 2023-05-23T12:05:40,070 creating build/bdist.linux-armv7l/wheel/simba_ml/prediction/logging 2023-05-23T12:05:40,072 copying build/lib/simba_ml/prediction/logging/logging_config.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/logging 2023-05-23T12:05:40,077 copying build/lib/simba_ml/prediction/logging/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/logging 2023-05-23T12:05:40,081 copying build/lib/simba_ml/prediction/logging/wandb_logger.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction/logging 2023-05-23T12:05:40,085 copying build/lib/simba_ml/prediction/normalizer.py -> build/bdist.linux-armv7l/wheel/simba_ml/prediction 2023-05-23T12:05:40,089 copying build/lib/simba_ml/_version.py -> build/bdist.linux-armv7l/wheel/simba_ml 2023-05-23T12:05:40,094 creating build/bdist.linux-armv7l/wheel/simba_ml/cli 2023-05-23T12:05:40,097 copying build/lib/simba_ml/cli/generate_data.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli 2023-05-23T12:05:40,102 creating build/bdist.linux-armv7l/wheel/simba_ml/cli/problem_viewer 2023-05-23T12:05:40,104 copying build/lib/simba_ml/cli/problem_viewer/problem_viewer.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli/problem_viewer 2023-05-23T12:05:40,108 copying build/lib/simba_ml/cli/problem_viewer/run_problem_viewer.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli/problem_viewer 2023-05-23T12:05:40,112 copying build/lib/simba_ml/cli/problem_viewer/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli/problem_viewer 2023-05-23T12:05:40,116 copying build/lib/simba_ml/cli/__main__.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli 2023-05-23T12:05:40,120 copying build/lib/simba_ml/cli/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli 2023-05-23T12:05:40,124 copying build/lib/simba_ml/cli/start_prediction.py -> build/bdist.linux-armv7l/wheel/simba_ml/cli 2023-05-23T12:05:40,129 creating build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,132 copying build/lib/simba_ml/example_problems/sird.py -> build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,136 copying build/lib/simba_ml/example_problems/sir.py -> build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,140 copying build/lib/simba_ml/example_problems/trigonometry.py -> build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,144 copying build/lib/simba_ml/example_problems/salt_and_brine_tanks.py -> build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,148 copying build/lib/simba_ml/example_problems/constant_function.py -> build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,152 copying build/lib/simba_ml/example_problems/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml/example_problems 2023-05-23T12:05:40,156 copying build/lib/simba_ml/__init__.py -> build/bdist.linux-armv7l/wheel/simba_ml 2023-05-23T12:05:40,159 running install_egg_info 2023-05-23T12:05:40,207 running egg_info 2023-05-23T12:05:40,216 writing simba_ml.egg-info/PKG-INFO 2023-05-23T12:05:40,220 writing dependency_links to simba_ml.egg-info/dependency_links.txt 2023-05-23T12:05:40,224 writing entry points to simba_ml.egg-info/entry_points.txt 2023-05-23T12:05:40,227 writing requirements to simba_ml.egg-info/requires.txt 2023-05-23T12:05:40,230 writing top-level names to simba_ml.egg-info/top_level.txt 2023-05-23T12:05:40,290 reading manifest file 'simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:40,302 reading manifest template 'MANIFEST.in' 2023-05-23T12:05:40,327 writing manifest file 'simba_ml.egg-info/SOURCES.txt' 2023-05-23T12:05:40,332 Copying simba_ml.egg-info to build/bdist.linux-armv7l/wheel/simba_ml-1.0.0rc6-py3.7.egg-info 2023-05-23T12:05:40,354 running install_scripts 2023-05-23T12:05:40,400 creating build/bdist.linux-armv7l/wheel/simba_ml-1.0.0rc6.dist-info/WHEEL 2023-05-23T12:05:40,618 creating '/tmp/pip-wheel-qcjfxo7o/.tmp-4o17afpr/simba_ml-1.0.0rc6-py3-none-any.whl' and adding '.' to it 2023-05-23T12:05:40,623 adding 'simba_ml/__init__.py' 2023-05-23T12:05:40,626 adding 'simba_ml/_version.py' 2023-05-23T12:05:40,629 adding 'simba_ml/error_handler.py' 2023-05-23T12:05:40,633 adding 'simba_ml/cli/__init__.py' 2023-05-23T12:05:40,635 adding 'simba_ml/cli/__main__.py' 2023-05-23T12:05:40,638 adding 'simba_ml/cli/generate_data.py' 2023-05-23T12:05:40,640 adding 'simba_ml/cli/start_prediction.py' 2023-05-23T12:05:40,643 adding 'simba_ml/cli/problem_viewer/__init__.py' 2023-05-23T12:05:40,646 adding 'simba_ml/cli/problem_viewer/problem_viewer.py' 2023-05-23T12:05:40,649 adding 'simba_ml/cli/problem_viewer/run_problem_viewer.py' 2023-05-23T12:05:40,652 adding 'simba_ml/example_problems/__init__.py' 2023-05-23T12:05:40,655 adding 'simba_ml/example_problems/constant_function.py' 2023-05-23T12:05:40,659 adding 'simba_ml/example_problems/salt_and_brine_tanks.py' 2023-05-23T12:05:40,662 adding 'simba_ml/example_problems/sir.py' 2023-05-23T12:05:40,664 adding 'simba_ml/example_problems/sird.py' 2023-05-23T12:05:40,666 adding 'simba_ml/example_problems/trigonometry.py' 2023-05-23T12:05:40,668 adding 'simba_ml/prediction/__init__.py' 2023-05-23T12:05:40,670 adding 'simba_ml/prediction/export.py' 2023-05-23T12:05:40,673 adding 'simba_ml/prediction/normalizer.py' 2023-05-23T12:05:40,675 adding 'simba_ml/prediction/plugin_loader.py' 2023-05-23T12:05:40,677 adding 'simba_ml/prediction/preprocessing.py' 2023-05-23T12:05:40,680 adding 'simba_ml/prediction/logging/__init__.py' 2023-05-23T12:05:40,682 adding 'simba_ml/prediction/logging/logging_config.py' 2023-05-23T12:05:40,684 adding 'simba_ml/prediction/logging/wandb_logger.py' 2023-05-23T12:05:40,686 adding 'simba_ml/prediction/steady_state/__init__.py' 2023-05-23T12:05:40,689 adding 'simba_ml/prediction/steady_state/config/__init__.py' 2023-05-23T12:05:40,691 adding 'simba_ml/prediction/steady_state/config/steady_state_data_config.py' 2023-05-23T12:05:40,694 adding 'simba_ml/prediction/steady_state/data_loader/__init__.py' 2023-05-23T12:05:40,696 adding 'simba_ml/prediction/steady_state/data_loader/dataset_generator.py' 2023-05-23T12:05:40,699 adding 'simba_ml/prediction/steady_state/data_loader/mixed_data_loader.py' 2023-05-23T12:05:40,702 adding 'simba_ml/prediction/steady_state/data_loader/splits.py' 2023-05-23T12:05:40,706 adding 'simba_ml/prediction/time_series/__init__.py' 2023-05-23T12:05:40,709 adding 'simba_ml/prediction/time_series/config/__init__.py' 2023-05-23T12:05:40,711 adding 'simba_ml/prediction/time_series/config/time_series_config.py' 2023-05-23T12:05:40,713 adding 'simba_ml/prediction/time_series/config/mixed_data_pipeline/__init__.py' 2023-05-23T12:05:40,715 adding 'simba_ml/prediction/time_series/config/mixed_data_pipeline/data_config.py' 2023-05-23T12:05:40,717 adding 'simba_ml/prediction/time_series/config/mixed_data_pipeline/pipeline_config.py' 2023-05-23T12:05:40,720 adding 'simba_ml/prediction/time_series/config/synthetic_data_pipeline/__init__.py' 2023-05-23T12:05:40,722 adding 'simba_ml/prediction/time_series/config/synthetic_data_pipeline/data_config.py' 2023-05-23T12:05:40,724 adding 'simba_ml/prediction/time_series/config/synthetic_data_pipeline/pipeline_config.py' 2023-05-23T12:05:40,726 adding 'simba_ml/prediction/time_series/config/transfer_learning_pipeline/__init__.py' 2023-05-23T12:05:40,728 adding 'simba_ml/prediction/time_series/config/transfer_learning_pipeline/data_config.py' 2023-05-23T12:05:40,730 adding 'simba_ml/prediction/time_series/config/transfer_learning_pipeline/pipeline_config.py' 2023-05-23T12:05:40,733 adding 'simba_ml/prediction/time_series/data_loader/__init__.py' 2023-05-23T12:05:40,735 adding 'simba_ml/prediction/time_series/data_loader/mixed_data_loader.py' 2023-05-23T12:05:40,737 adding 'simba_ml/prediction/time_series/data_loader/splits.py' 2023-05-23T12:05:40,740 adding 'simba_ml/prediction/time_series/data_loader/synthetic_data_loader.py' 2023-05-23T12:05:40,742 adding 'simba_ml/prediction/time_series/data_loader/transfer_learning_data_loader.py' 2023-05-23T12:05:40,745 adding 'simba_ml/prediction/time_series/data_loader/window_generator.py' 2023-05-23T12:05:40,747 adding 'simba_ml/prediction/time_series/metrics/__init__.py' 2023-05-23T12:05:40,749 adding 'simba_ml/prediction/time_series/metrics/factory.py' 2023-05-23T12:05:40,753 adding 'simba_ml/prediction/time_series/metrics/metrics.py' 2023-05-23T12:05:40,755 adding 'simba_ml/prediction/time_series/models/__init__.py' 2023-05-23T12:05:40,758 adding 'simba_ml/prediction/time_series/models/average_predictor.py' 2023-05-23T12:05:40,760 adding 'simba_ml/prediction/time_series/models/factory.py' 2023-05-23T12:05:40,762 adding 'simba_ml/prediction/time_series/models/last_value_predictor.py' 2023-05-23T12:05:40,765 adding 'simba_ml/prediction/time_series/models/model.py' 2023-05-23T12:05:40,767 adding 'simba_ml/prediction/time_series/models/model_to_transfer_learning_model.py' 2023-05-23T12:05:40,769 adding 'simba_ml/prediction/time_series/models/transfer_learning_factory.py' 2023-05-23T12:05:40,772 adding 'simba_ml/prediction/time_series/models/transfer_learning_model.py' 2023-05-23T12:05:40,774 adding 'simba_ml/prediction/time_series/models/keras/__init__.py' 2023-05-23T12:05:40,776 adding 'simba_ml/prediction/time_series/models/keras/dense_neural_network.py' 2023-05-23T12:05:40,779 adding 'simba_ml/prediction/time_series/models/keras/keras_model.py' 2023-05-23T12:05:40,782 adding 'simba_ml/prediction/time_series/models/pytorch_lightning/__init__.py' 2023-05-23T12:05:40,784 adding 'simba_ml/prediction/time_series/models/pytorch_lightning/dense_neural_network.py' 2023-05-23T12:05:40,787 adding 'simba_ml/prediction/time_series/models/pytorch_lightning/pytorch_lightning_model.py' 2023-05-23T12:05:40,790 adding 'simba_ml/prediction/time_series/models/sk_learn/__init__.py' 2023-05-23T12:05:40,792 adding 'simba_ml/prediction/time_series/models/sk_learn/decision_tree_regressor.py' 2023-05-23T12:05:40,795 adding 'simba_ml/prediction/time_series/models/sk_learn/linear_regressor.py' 2023-05-23T12:05:40,797 adding 'simba_ml/prediction/time_series/models/sk_learn/nearest_neighbors_regressor.py' 2023-05-23T12:05:40,799 adding 'simba_ml/prediction/time_series/models/sk_learn/random_forest_regressor.py' 2023-05-23T12:05:40,802 adding 'simba_ml/prediction/time_series/models/sk_learn/sk_learn_model.py' 2023-05-23T12:05:40,804 adding 'simba_ml/prediction/time_series/models/sk_learn/support_vector_machine_regressor.py' 2023-05-23T12:05:40,806 adding 'simba_ml/prediction/time_series/pipelines/__init__.py' 2023-05-23T12:05:40,809 adding 'simba_ml/prediction/time_series/pipelines/mixed_data_pipeline.py' 2023-05-23T12:05:40,812 adding 'simba_ml/prediction/time_series/pipelines/synthetic_data_pipeline.py' 2023-05-23T12:05:40,814 adding 'simba_ml/prediction/time_series/pipelines/transfer_learning_pipeline.py' 2023-05-23T12:05:40,817 adding 'simba_ml/simulation/__init__.py' 2023-05-23T12:05:40,819 adding 'simba_ml/simulation/species.py' 2023-05-23T12:05:40,822 adding 'simba_ml/simulation/constraints/__init__.py' 2023-05-23T12:05:40,824 adding 'simba_ml/simulation/constraints/constraint.py' 2023-05-23T12:05:40,826 adding 'simba_ml/simulation/constraints/keep_species_sum.py' 2023-05-23T12:05:40,828 adding 'simba_ml/simulation/constraints/species_value_in_range.py' 2023-05-23T12:05:40,831 adding 'simba_ml/simulation/constraints/species_value_truncator.py' 2023-05-23T12:05:40,833 adding 'simba_ml/simulation/derivative_noiser/__init__.py' 2023-05-23T12:05:40,836 adding 'simba_ml/simulation/derivative_noiser/additive_deriv_noiser.py' 2023-05-23T12:05:40,837 adding 'simba_ml/simulation/derivative_noiser/derivative_noiser.py' 2023-05-23T12:05:40,840 adding 'simba_ml/simulation/derivative_noiser/multi_deriv_noiser.py' 2023-05-23T12:05:40,842 adding 'simba_ml/simulation/derivative_noiser/multiplicative_deriv_noiser.py' 2023-05-23T12:05:40,844 adding 'simba_ml/simulation/derivative_noiser/no_deriv_noiser.py' 2023-05-23T12:05:40,846 adding 'simba_ml/simulation/derivative_noiser/sequential_deriv_noiser.py' 2023-05-23T12:05:40,848 adding 'simba_ml/simulation/distributions/__init__.py' 2023-05-23T12:05:40,851 adding 'simba_ml/simulation/distributions/beta_distribution.py' 2023-05-23T12:05:40,853 adding 'simba_ml/simulation/distributions/constant.py' 2023-05-23T12:05:40,855 adding 'simba_ml/simulation/distributions/continuous_uniform_distribution.py' 2023-05-23T12:05:40,857 adding 'simba_ml/simulation/distributions/distribution.py' 2023-05-23T12:05:40,859 adding 'simba_ml/simulation/distributions/helper_functions.py' 2023-05-23T12:05:40,861 adding 'simba_ml/simulation/distributions/lognormal_distribution.py' 2023-05-23T12:05:40,863 adding 'simba_ml/simulation/distributions/normal_distribution.py' 2023-05-23T12:05:40,865 adding 'simba_ml/simulation/distributions/vector_distribution.py' 2023-05-23T12:05:40,868 adding 'simba_ml/simulation/generators/__init__.py' 2023-05-23T12:05:40,870 adding 'simba_ml/simulation/generators/generator_interface.py' 2023-05-23T12:05:40,873 adding 'simba_ml/simulation/generators/pertubation_generator.py' 2023-05-23T12:05:40,876 adding 'simba_ml/simulation/generators/steady_state_generator.py' 2023-05-23T12:05:40,878 adding 'simba_ml/simulation/generators/time_points_generator.py' 2023-05-23T12:05:40,880 adding 'simba_ml/simulation/generators/time_series_generator.py' 2023-05-23T12:05:40,883 adding 'simba_ml/simulation/kinetic_parameters/__init__.py' 2023-05-23T12:05:40,885 adding 'simba_ml/simulation/kinetic_parameters/constant_kinetic_parameter.py' 2023-05-23T12:05:40,887 adding 'simba_ml/simulation/kinetic_parameters/dict_based_kinetic_parameter.py' 2023-05-23T12:05:40,889 adding 'simba_ml/simulation/kinetic_parameters/function_based_kinetic_parameter.py' 2023-05-23T12:05:40,892 adding 'simba_ml/simulation/kinetic_parameters/kinetic_parameter.py' 2023-05-23T12:05:40,894 adding 'simba_ml/simulation/noisers/__init__.py' 2023-05-23T12:05:40,896 adding 'simba_ml/simulation/noisers/additive_noiser.py' 2023-05-23T12:05:40,899 adding 'simba_ml/simulation/noisers/adjusting_mean_noiser.py' 2023-05-23T12:05:40,901 adding 'simba_ml/simulation/noisers/column_noiser.py' 2023-05-23T12:05:40,903 adding 'simba_ml/simulation/noisers/elastic_noiser.py' 2023-05-23T12:05:40,905 adding 'simba_ml/simulation/noisers/multi_noiser.py' 2023-05-23T12:05:40,907 adding 'simba_ml/simulation/noisers/multiplicative_noiser.py' 2023-05-23T12:05:40,909 adding 'simba_ml/simulation/noisers/no_noiser.py' 2023-05-23T12:05:40,911 adding 'simba_ml/simulation/noisers/noiser.py' 2023-05-23T12:05:40,913 adding 'simba_ml/simulation/noisers/sequential_noiser.py' 2023-05-23T12:05:40,916 adding 'simba_ml/simulation/sparsifier/__init__.py' 2023-05-23T12:05:40,918 adding 'simba_ml/simulation/sparsifier/constant_suffix_remover.py' 2023-05-23T12:05:40,921 adding 'simba_ml/simulation/sparsifier/interval_sparsifier.py' 2023-05-23T12:05:40,924 adding 'simba_ml/simulation/sparsifier/keep_extreme_values_sparsifier.py' 2023-05-23T12:05:40,925 adding 'simba_ml/simulation/sparsifier/no_sparsifier.py' 2023-05-23T12:05:40,927 adding 'simba_ml/simulation/sparsifier/random_sample_sparsifier.py' 2023-05-23T12:05:40,930 adding 'simba_ml/simulation/sparsifier/sequential_sparsifier.py' 2023-05-23T12:05:40,931 adding 'simba_ml/simulation/sparsifier/sparsifier.py' 2023-05-23T12:05:40,934 adding 'simba_ml/simulation/system_model/__init__.py' 2023-05-23T12:05:40,938 adding 'simba_ml/simulation/system_model/system_model.py' 2023-05-23T12:05:40,940 adding 'simba_ml/simulation/system_model/system_model_interface.py' 2023-05-23T12:05:40,943 adding 'simba_ml-1.0.0rc6.dist-info/DESCRIPTION.rst' 2023-05-23T12:05:40,944 adding 'simba_ml-1.0.0rc6.dist-info/entry_points.txt' 2023-05-23T12:05:40,946 adding 'simba_ml-1.0.0rc6.dist-info/metadata.json' 2023-05-23T12:05:40,947 adding 'simba_ml-1.0.0rc6.dist-info/top_level.txt' 2023-05-23T12:05:40,949 adding 'simba_ml-1.0.0rc6.dist-info/WHEEL' 2023-05-23T12:05:40,951 adding 'simba_ml-1.0.0rc6.dist-info/METADATA' 2023-05-23T12:05:40,955 adding 'simba_ml-1.0.0rc6.dist-info/RECORD' 2023-05-23T12:05:41,191 Building wheel for simba-ml (pyproject.toml): finished with status 'done' 2023-05-23T12:05:41,209 Created wheel for simba-ml: filename=simba_ml-1.0.0rc6-py3-none-any.whl size=113703 sha256=20ce6f7299c91e87c08d3ce0293d83f29f8d9e69dcbfca30d984ce069dfa9240 2023-05-23T12:05:41,211 Stored in directory: /tmp/pip-ephem-wheel-cache-tu4tg9o2/wheels/8e/bf/a8/9a26ab641de54d62533c02f5914f59af49e9145c0a0296ae74 2023-05-23T12:05:41,250 Successfully built simba-ml 2023-05-23T12:05:41,264 Removed build tracker: '/tmp/pip-build-tracker-fm2jqpy2'