2023-05-24T10:32:46,858 Created temporary directory: /tmp/pip-build-tracker-xx55djim 2023-05-24T10:32:46,861 Initialized build tracking at /tmp/pip-build-tracker-xx55djim 2023-05-24T10:32:46,862 Created build tracker: /tmp/pip-build-tracker-xx55djim 2023-05-24T10:32:46,862 Entered build tracker: /tmp/pip-build-tracker-xx55djim 2023-05-24T10:32:46,863 Created temporary directory: /tmp/pip-wheel-wwo9bpz6 2023-05-24T10:32:46,872 Created temporary directory: /tmp/pip-ephem-wheel-cache-ocxf80kj 2023-05-24T10:32:46,929 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-24T10:32:46,937 2 location(s) to search for versions of isotopylog: 2023-05-24T10:32:46,937 * https://pypi.org/simple/isotopylog/ 2023-05-24T10:32:46,937 * https://www.piwheels.org/simple/isotopylog/ 2023-05-24T10:32:46,938 Fetching project page and analyzing links: https://pypi.org/simple/isotopylog/ 2023-05-24T10:32:46,939 Getting page https://pypi.org/simple/isotopylog/ 2023-05-24T10:32:46,943 Found index url https://pypi.org/simple/ 2023-05-24T10:32:47,140 Fetched page https://pypi.org/simple/isotopylog/ as application/vnd.pypi.simple.v1+json 2023-05-24T10:32:47,145 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/3a/86/57d35300232df1a30071051ee2d1e345d6a03e57316d19d4dc0b5498e3dd/isotopylog-0.0.4-py3.7.egg (from https://pypi.org/simple/isotopylog/) 2023-05-24T10:32:47,146 Found link https://files.pythonhosted.org/packages/96/a6/cff3db24ef01d9249d3b476a4061862d6a1417c2c48c1dab5bc8c009eaa5/isotopylog-0.0.4.tar.gz (from https://pypi.org/simple/isotopylog/), version: 0.0.4 2023-05-24T10:32:47,147 Found link https://files.pythonhosted.org/packages/96/38/63628b6ada6def5ceb52b7024c5d1c5cfca26de7e020813a732c6af724a5/isotopylog-0.0.5.tar.gz (from https://pypi.org/simple/isotopylog/), version: 0.0.5 2023-05-24T10:32:47,147 Found link https://files.pythonhosted.org/packages/3f/9d/2793bf3be3ee4f54458b849691b2b98a8cb7e22fe016981a3a4f08e15a4e/isotopylog-0.0.6.tar.gz (from https://pypi.org/simple/isotopylog/), version: 0.0.6 2023-05-24T10:32:47,148 Found link https://files.pythonhosted.org/packages/88/2e/12999f055fb3fac356fa976667c7c869d4d484612edad05cc2a6931568ce/isotopylog-0.0.7.tar.gz (from https://pypi.org/simple/isotopylog/), version: 0.0.7 2023-05-24T10:32:47,149 Skipping link: No binaries permitted for isotopylog: https://files.pythonhosted.org/packages/63/66/f77f99785eae3388b707240e0bf8512560578967d3d5343a26238ab6605a/isotopylog-0.0.8-py3-none-any.whl (from https://pypi.org/simple/isotopylog/) 2023-05-24T10:32:47,149 Found link https://files.pythonhosted.org/packages/0b/28/b8daf236794cd840e72587408f38b5288cd5e9bd99ea4fc691048aff169a/isotopylog-0.0.8.tar.gz (from https://pypi.org/simple/isotopylog/), version: 0.0.8 2023-05-24T10:32:47,150 Fetching project page and analyzing links: https://www.piwheels.org/simple/isotopylog/ 2023-05-24T10:32:47,151 Getting page https://www.piwheels.org/simple/isotopylog/ 2023-05-24T10:32:47,153 Found index url https://www.piwheels.org/simple/ 2023-05-24T10:32:47,390 Fetched page https://www.piwheels.org/simple/isotopylog/ as text/html 2023-05-24T10:32:47,395 Skipping link: No binaries permitted for isotopylog: https://www.piwheels.org/simple/isotopylog/isotopylog-0.0.7-py3-none-any.whl#sha256=08e3bce1df0ee53a40d9ac960554ea7f1d7c9e41a1f5582f4b8544461ed863df (from https://www.piwheels.org/simple/isotopylog/) 2023-05-24T10:32:47,396 Skipping link: No binaries permitted for isotopylog: https://www.piwheels.org/simple/isotopylog/isotopylog-0.0.6-py3-none-any.whl#sha256=6603a9524fb7df2f0c46b91609943408e4650827830692c87483d54e1823a365 (from https://www.piwheels.org/simple/isotopylog/) 2023-05-24T10:32:47,396 Skipping link: No binaries permitted for isotopylog: https://www.piwheels.org/simple/isotopylog/isotopylog-0.0.5-py3-none-any.whl#sha256=cc6b94849d2f2749dae50304dfb4c23bda5509707f83e6aaf532613131c9af2e (from https://www.piwheels.org/simple/isotopylog/) 2023-05-24T10:32:47,397 Skipping link: No binaries permitted for isotopylog: https://www.piwheels.org/simple/isotopylog/isotopylog-0.0.4-py3-none-any.whl#sha256=aaf8035ad7e2f28f1b4bda97f86c8ae677d026788bc3b104d0c3fc4fe136e507 (from https://www.piwheels.org/simple/isotopylog/) 2023-05-24T10:32:47,397 Skipping link: not a file: https://www.piwheels.org/simple/isotopylog/ 2023-05-24T10:32:47,398 Skipping link: not a file: https://pypi.org/simple/isotopylog/ 2023-05-24T10:32:47,431 Given no hashes to check 1 links for project 'isotopylog': discarding no candidates 2023-05-24T10:32:47,462 Collecting isotopylog==0.0.8 2023-05-24T10:32:47,467 Created temporary directory: /tmp/pip-unpack-yk2basvm 2023-05-24T10:32:47,669 Downloading isotopylog-0.0.8.tar.gz (60 kB) 2023-05-24T10:32:47,859 Added isotopylog==0.0.8 from https://files.pythonhosted.org/packages/0b/28/b8daf236794cd840e72587408f38b5288cd5e9bd99ea4fc691048aff169a/isotopylog-0.0.8.tar.gz to build tracker '/tmp/pip-build-tracker-xx55djim' 2023-05-24T10:32:47,862 Running setup.py (path:/tmp/pip-wheel-wwo9bpz6/isotopylog_611e829f621e48e894653a56acb68b53/setup.py) egg_info for package isotopylog 2023-05-24T10:32:47,864 Created temporary directory: /tmp/pip-pip-egg-info-2ytb_6bz 2023-05-24T10:32:47,864 Preparing metadata (setup.py): started 2023-05-24T10:32:47,866 Running command python setup.py egg_info 2023-05-24T10:32:49,327 running egg_info 2023-05-24T10:32:49,330 creating /tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info 2023-05-24T10:32:49,388 writing /tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/PKG-INFO 2023-05-24T10:32:49,394 writing dependency_links to /tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/dependency_links.txt 2023-05-24T10:32:49,398 writing requirements to /tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/requires.txt 2023-05-24T10:32:49,401 writing top-level names to /tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/top_level.txt 2023-05-24T10:32:49,403 writing manifest file '/tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/SOURCES.txt' 2023-05-24T10:32:49,588 reading manifest file '/tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/SOURCES.txt' 2023-05-24T10:32:49,592 reading manifest template 'MANIFEST.in' 2023-05-24T10:32:49,602 writing manifest file '/tmp/pip-pip-egg-info-2ytb_6bz/isotopylog.egg-info/SOURCES.txt' 2023-05-24T10:32:49,722 Preparing metadata (setup.py): finished with status 'done' 2023-05-24T10:32:49,736 Source in /tmp/pip-wheel-wwo9bpz6/isotopylog_611e829f621e48e894653a56acb68b53 has version 0.0.8, which satisfies requirement isotopylog==0.0.8 from https://files.pythonhosted.org/packages/0b/28/b8daf236794cd840e72587408f38b5288cd5e9bd99ea4fc691048aff169a/isotopylog-0.0.8.tar.gz 2023-05-24T10:32:49,738 Removed isotopylog==0.0.8 from https://files.pythonhosted.org/packages/0b/28/b8daf236794cd840e72587408f38b5288cd5e9bd99ea4fc691048aff169a/isotopylog-0.0.8.tar.gz from build tracker '/tmp/pip-build-tracker-xx55djim' 2023-05-24T10:32:49,751 Created temporary directory: /tmp/pip-unpack-ttfofnyc 2023-05-24T10:32:49,752 Building wheels for collected packages: isotopylog 2023-05-24T10:32:49,762 Created temporary directory: /tmp/pip-wheel-alad5i_1 2023-05-24T10:32:49,762 Building wheel for isotopylog (setup.py): started 2023-05-24T10:32:49,764 Destination directory: /tmp/pip-wheel-alad5i_1 2023-05-24T10:32:49,765 Running command python setup.py bdist_wheel 2023-05-24T10:32:51,676 running bdist_wheel 2023-05-24T10:32:51,858 running build 2023-05-24T10:32:51,858 running build_py 2023-05-24T10:32:51,924 creating build 2023-05-24T10:32:51,925 creating build/lib 2023-05-24T10:32:51,927 creating build/lib/isotopylog 2023-05-24T10:32:51,929 copying isotopylog/timedata.py -> build/lib/isotopylog 2023-05-24T10:32:51,935 copying isotopylog/ratedata_helper.py -> build/lib/isotopylog 2023-05-24T10:32:51,941 copying isotopylog/timedata_helper.py -> build/lib/isotopylog 2023-05-24T10:32:51,945 copying isotopylog/ratedata.py -> build/lib/isotopylog 2023-05-24T10:32:51,952 copying isotopylog/dictionaries.py -> build/lib/isotopylog 2023-05-24T10:32:51,956 copying isotopylog/__init__.py -> build/lib/isotopylog 2023-05-24T10:32:51,960 copying isotopylog/calc_funcs.py -> build/lib/isotopylog 2023-05-24T10:32:51,965 copying isotopylog/core_functions.py -> build/lib/isotopylog 2023-05-24T10:32:51,969 running egg_info 2023-05-24T10:32:52,108 writing isotopylog.egg-info/PKG-INFO 2023-05-24T10:32:52,113 writing dependency_links to isotopylog.egg-info/dependency_links.txt 2023-05-24T10:32:52,117 writing requirements to isotopylog.egg-info/requires.txt 2023-05-24T10:32:52,119 writing top-level names to isotopylog.egg-info/top_level.txt 2023-05-24T10:32:52,184 reading manifest file 'isotopylog.egg-info/SOURCES.txt' 2023-05-24T10:32:52,188 reading manifest template 'MANIFEST.in' 2023-05-24T10:32:52,198 writing manifest file 'isotopylog.egg-info/SOURCES.txt' 2023-05-24T10:32:52,204 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'isotopylog.lit_values' is absent from the `packages` configuration. 2023-05-24T10:32:52,204 !! 2023-05-24T10:32:52,205 ******************************************************************************** 2023-05-24T10:32:52,206 ############################ 2023-05-24T10:32:52,206 # Package would be ignored # 2023-05-24T10:32:52,206 ############################ 2023-05-24T10:32:52,207 Python recognizes 'isotopylog.lit_values' as an importable package[^1], 2023-05-24T10:32:52,207 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:32:52,208 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:32:52,208 package, please make sure that 'isotopylog.lit_values' is explicitly added 2023-05-24T10:32:52,208 to the `packages` configuration field. 2023-05-24T10:32:52,209 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:32:52,210 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:32:52,210 instead of `find_packages(...)`/`find:`). 2023-05-24T10:32:52,211 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:32:52,212 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:32:52,213 If you don't want 'isotopylog.lit_values' to be distributed and are 2023-05-24T10:32:52,213 already explicitly excluding 'isotopylog.lit_values' via 2023-05-24T10:32:52,213 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:32:52,213 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:32:52,214 combination with a more fine grained `package-data` configuration. 2023-05-24T10:32:52,214 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:32:52,215 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:32:52,217 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:32:52,217 even if it does not contain any `.py` files. 2023-05-24T10:32:52,217 On the other hand, currently there is no concept of package data 2023-05-24T10:32:52,218 directory, all directories are treated like packages. 2023-05-24T10:32:52,218 ******************************************************************************** 2023-05-24T10:32:52,219 !! 2023-05-24T10:32:52,219 check.warn(importable) 2023-05-24T10:32:52,220 creating build/lib/isotopylog/lit_values 2023-05-24T10:32:52,220 copying isotopylog/lit_values/lit_values.csv -> build/lib/isotopylog/lit_values 2023-05-24T10:32:52,281 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-24T10:32:52,281 !! 2023-05-24T10:32:52,282 ******************************************************************************** 2023-05-24T10:32:52,283 Please avoid running ``setup.py`` directly. 2023-05-24T10:32:52,283 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-24T10:32:52,284 other standards-based tools. 2023-05-24T10:32:52,284 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-24T10:32:52,285 ******************************************************************************** 2023-05-24T10:32:52,285 !! 2023-05-24T10:32:52,286 self.initialize_options() 2023-05-24T10:32:52,354 installing to build/bdist.linux-armv7l/wheel 2023-05-24T10:32:52,354 running install 2023-05-24T10:32:52,413 running install_lib 2023-05-24T10:32:52,481 creating build/bdist.linux-armv7l 2023-05-24T10:32:52,482 creating build/bdist.linux-armv7l/wheel 2023-05-24T10:32:52,485 creating build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,487 copying build/lib/isotopylog/timedata.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,494 creating build/bdist.linux-armv7l/wheel/isotopylog/lit_values 2023-05-24T10:32:52,496 copying build/lib/isotopylog/lit_values/lit_values.csv -> build/bdist.linux-armv7l/wheel/isotopylog/lit_values 2023-05-24T10:32:52,501 copying build/lib/isotopylog/ratedata_helper.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,507 copying build/lib/isotopylog/timedata_helper.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,512 copying build/lib/isotopylog/ratedata.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,519 copying build/lib/isotopylog/dictionaries.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,524 copying build/lib/isotopylog/__init__.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,528 copying build/lib/isotopylog/calc_funcs.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,534 copying build/lib/isotopylog/core_functions.py -> build/bdist.linux-armv7l/wheel/isotopylog 2023-05-24T10:32:52,538 running install_egg_info 2023-05-24T10:32:52,610 Copying isotopylog.egg-info to build/bdist.linux-armv7l/wheel/isotopylog-0.0.8-py3.7.egg-info 2023-05-24T10:32:52,630 running install_scripts 2023-05-24T10:32:52,670 creating build/bdist.linux-armv7l/wheel/isotopylog-0.0.8.dist-info/WHEEL 2023-05-24T10:32:52,674 creating '/tmp/pip-wheel-alad5i_1/isotopylog-0.0.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-24T10:32:52,680 adding 'isotopylog/__init__.py' 2023-05-24T10:32:52,691 adding 'isotopylog/calc_funcs.py' 2023-05-24T10:32:52,697 adding 'isotopylog/core_functions.py' 2023-05-24T10:32:52,700 adding 'isotopylog/dictionaries.py' 2023-05-24T10:32:52,714 adding 'isotopylog/ratedata.py' 2023-05-24T10:32:52,725 adding 'isotopylog/ratedata_helper.py' 2023-05-24T10:32:52,737 adding 'isotopylog/timedata.py' 2023-05-24T10:32:52,743 adding 'isotopylog/timedata_helper.py' 2023-05-24T10:32:52,748 adding 'isotopylog/lit_values/lit_values.csv' 2023-05-24T10:32:52,753 adding 'isotopylog-0.0.8.dist-info/METADATA' 2023-05-24T10:32:52,755 adding 'isotopylog-0.0.8.dist-info/WHEEL' 2023-05-24T10:32:52,757 adding 'isotopylog-0.0.8.dist-info/top_level.txt' 2023-05-24T10:32:52,759 adding 'isotopylog-0.0.8.dist-info/RECORD' 2023-05-24T10:32:52,763 removing build/bdist.linux-armv7l/wheel 2023-05-24T10:32:52,920 Building wheel for isotopylog (setup.py): finished with status 'done' 2023-05-24T10:32:52,930 Created wheel for isotopylog: filename=isotopylog-0.0.8-py3-none-any.whl size=58509 sha256=be319faf952f3c43afcae6df1fa439eb71674cc79d3d87aa73c1432e5df429d6 2023-05-24T10:32:52,933 Stored in directory: /tmp/pip-ephem-wheel-cache-ocxf80kj/wheels/92/f4/9a/b5ccf2e0255915a7cf1b0a591aef9a2fe157cc85de5cd8a62a 2023-05-24T10:32:52,960 Successfully built isotopylog 2023-05-24T10:32:52,976 Removed build tracker: '/tmp/pip-build-tracker-xx55djim'