2023-05-24T10:35:40,594 Created temporary directory: /tmp/pip-build-tracker-mo_39j2o 2023-05-24T10:35:40,597 Initialized build tracking at /tmp/pip-build-tracker-mo_39j2o 2023-05-24T10:35:40,597 Created build tracker: /tmp/pip-build-tracker-mo_39j2o 2023-05-24T10:35:40,597 Entered build tracker: /tmp/pip-build-tracker-mo_39j2o 2023-05-24T10:35:40,599 Created temporary directory: /tmp/pip-wheel-zlvc3lxh 2023-05-24T10:35:40,607 Created temporary directory: /tmp/pip-ephem-wheel-cache-jp2vb_kt 2023-05-24T10:35:40,659 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-24T10:35:40,667 2 location(s) to search for versions of pywfa: 2023-05-24T10:35:40,667 * https://pypi.org/simple/pywfa/ 2023-05-24T10:35:40,667 * https://www.piwheels.org/simple/pywfa/ 2023-05-24T10:35:40,668 Fetching project page and analyzing links: https://pypi.org/simple/pywfa/ 2023-05-24T10:35:40,669 Getting page https://pypi.org/simple/pywfa/ 2023-05-24T10:35:40,673 Found index url https://pypi.org/simple/ 2023-05-24T10:35:40,857 Fetched page https://pypi.org/simple/pywfa/ as application/vnd.pypi.simple.v1+json 2023-05-24T10:35:40,864 Found link https://files.pythonhosted.org/packages/a2/27/edbaabe18d863b40b4d0cd143105f8d5ef889e0c58ebab5c7a5f80a41830/pywfa-0.2.5.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.2.5 2023-05-24T10:35:40,865 Found link https://files.pythonhosted.org/packages/0f/01/3aea5a52a6a625fb3ef0c31f516dcdb4e89ba12e21a24bd3678532f67dd2/pywfa-0.2.6.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.2.6 2023-05-24T10:35:40,866 Skipping link: No binaries permitted for pywfa: https://files.pythonhosted.org/packages/69/57/98c7fbf1d497771c732435d02190081514460a8d3518165d5e599ac639dc/pywfa-0.2.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:40,868 Found link https://files.pythonhosted.org/packages/44/b4/f6d5a8e853e18e6eda0358bff42f12f110003ef275b05bb19a4c34d575c7/pywfa-0.2.7.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.2.7 2023-05-24T10:35:40,869 Found link https://files.pythonhosted.org/packages/d5/2d/06abe85c9a4625ff663f04bf79a7236c2ff215b3a474091a98b61611aec1/pywfa-0.3.0.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.3.0 2023-05-24T10:35:40,870 Found link https://files.pythonhosted.org/packages/de/00/b037e1881f50f88d2a3f312a44f03d2430e8c58b3a5b81a005280a54c21a/pywfa-0.4.0.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.4.0 2023-05-24T10:35:40,872 Found link https://files.pythonhosted.org/packages/98/83/0b435c0c681ef8d9418b3d493342041189f3faf470d2dbfa384e7dd234cf/pywfa-0.4.1.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.4.1 2023-05-24T10:35:40,873 Found link https://files.pythonhosted.org/packages/5d/92/366a9f0a0a4b34e2650199861a377eddf7e9f24ecc5298efb81352dc7cee/pywfa-0.4.2.tar.gz (from https://pypi.org/simple/pywfa/) (requires-python:>=3.7), version: 0.4.2 2023-05-24T10:35:40,874 Fetching project page and analyzing links: https://www.piwheels.org/simple/pywfa/ 2023-05-24T10:35:40,875 Getting page https://www.piwheels.org/simple/pywfa/ 2023-05-24T10:35:40,877 Found index url https://www.piwheels.org/simple/ 2023-05-24T10:35:41,198 Fetched page https://www.piwheels.org/simple/pywfa/ as text/html 2023-05-24T10:35:41,218 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.1-cp39-cp39-linux_armv7l.whl#sha256=e0d6f23f24de0cabda8008b67244aea7d28ffe22dbc1763e81bdfa93dc7c29e4 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,218 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.1-cp39-cp39-linux_armv6l.whl#sha256=e0d6f23f24de0cabda8008b67244aea7d28ffe22dbc1763e81bdfa93dc7c29e4 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,219 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.1-cp37-cp37m-linux_armv7l.whl#sha256=a91d339019602489eb2ce6a054c0986595bbb0be2dc80366005ca64ff496c68e (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,219 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.1-cp37-cp37m-linux_armv6l.whl#sha256=a91d339019602489eb2ce6a054c0986595bbb0be2dc80366005ca64ff496c68e (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,220 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.0-cp39-cp39-linux_armv7l.whl#sha256=e0c72841834504d7295678419ce4b8f79b90594d2662ce233374250d343f456e (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,220 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.0-cp39-cp39-linux_armv6l.whl#sha256=e0c72841834504d7295678419ce4b8f79b90594d2662ce233374250d343f456e (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,221 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.0-cp37-cp37m-linux_armv7l.whl#sha256=713f33be74cc7a4496f80dfe03a29164283dff1ed58392b98d4b5a96e76b1896 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,222 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.4.0-cp37-cp37m-linux_armv6l.whl#sha256=713f33be74cc7a4496f80dfe03a29164283dff1ed58392b98d4b5a96e76b1896 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,222 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.3.0-cp39-cp39-linux_armv7l.whl#sha256=c5ff7fa96c0d5697f8bd113415cdd9af3a60406d24ea01e861bdf10797cc4af2 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,223 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.3.0-cp39-cp39-linux_armv6l.whl#sha256=c5ff7fa96c0d5697f8bd113415cdd9af3a60406d24ea01e861bdf10797cc4af2 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,223 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.3.0-cp37-cp37m-linux_armv7l.whl#sha256=9b66e4b61f1a164767382bd5015298ec09393385e4b8d4347499e6f4949df1ef (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,224 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.3.0-cp37-cp37m-linux_armv6l.whl#sha256=9b66e4b61f1a164767382bd5015298ec09393385e4b8d4347499e6f4949df1ef (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,224 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.7-cp39-cp39-linux_armv7l.whl#sha256=4f8e40151734541a40568fbb2ed33bc1b6701c47b1ea500e6aeda45405750b38 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,225 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.7-cp39-cp39-linux_armv6l.whl#sha256=4f8e40151734541a40568fbb2ed33bc1b6701c47b1ea500e6aeda45405750b38 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,225 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.7-cp37-cp37m-linux_armv7l.whl#sha256=f3245e4e3e61f357e2961e756577d44968b16c48a13519f81f8572c6eed16859 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,226 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.7-cp37-cp37m-linux_armv6l.whl#sha256=f3245e4e3e61f357e2961e756577d44968b16c48a13519f81f8572c6eed16859 (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,226 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.6-cp39-cp39-linux_armv7l.whl#sha256=25c2ae021d0c40c5b4c2002e4e94e0f7a48859772505ef4a423d1a881049b28f (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,227 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.6-cp39-cp39-linux_armv6l.whl#sha256=25c2ae021d0c40c5b4c2002e4e94e0f7a48859772505ef4a423d1a881049b28f (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,227 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.6-cp37-cp37m-linux_armv7l.whl#sha256=853686084d3af6af2ffddd3320c0f5627d6347b212a54e626900174e5d21097c (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,228 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.6-cp37-cp37m-linux_armv6l.whl#sha256=853686084d3af6af2ffddd3320c0f5627d6347b212a54e626900174e5d21097c (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,228 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp39-cp39-linux_armv7l.whl#sha256=d9c41aea18ead8981e0f0e6710c75bf07ed02642a29ec7308afe0f6a5187083a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,229 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp39-cp39-linux_armv6l.whl#sha256=d9c41aea18ead8981e0f0e6710c75bf07ed02642a29ec7308afe0f6a5187083a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,229 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp37-cp37m-linux_armv7l.whl#sha256=b39d17c222708e4ff97f3c3c659a7507d1c9141d6961659a72d6e6a00ad4cf6a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,230 Skipping link: No binaries permitted for pywfa: https://www.piwheels.org/simple/pywfa/pywfa-0.2.5-cp37-cp37m-linux_armv6l.whl#sha256=b39d17c222708e4ff97f3c3c659a7507d1c9141d6961659a72d6e6a00ad4cf6a (from https://www.piwheels.org/simple/pywfa/) (requires-python:>=3.7) 2023-05-24T10:35:41,231 Skipping link: not a file: https://www.piwheels.org/simple/pywfa/ 2023-05-24T10:35:41,231 Skipping link: not a file: https://pypi.org/simple/pywfa/ 2023-05-24T10:35:41,266 Given no hashes to check 1 links for project 'pywfa': discarding no candidates 2023-05-24T10:35:41,296 Collecting pywfa==0.4.2 2023-05-24T10:35:41,301 Created temporary directory: /tmp/pip-unpack-_zoebvgz 2023-05-24T10:35:41,741 Downloading pywfa-0.4.2.tar.gz (3.5 MB) 2023-05-24T10:35:44,020 Added pywfa==0.4.2 from https://files.pythonhosted.org/packages/5d/92/366a9f0a0a4b34e2650199861a377eddf7e9f24ecc5298efb81352dc7cee/pywfa-0.4.2.tar.gz to build tracker '/tmp/pip-build-tracker-mo_39j2o' 2023-05-24T10:35:44,031 Created temporary directory: /tmp/pip-build-env-qgce2coh 2023-05-24T10:35:44,052 Installing build dependencies: started 2023-05-24T10:35:44,054 Running command pip subprocess to install build dependencies 2023-05-24T10:35:46,777 Using pip 23.1.2 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-05-24T10:35:47,548 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-24T10:35:51,710 Collecting setuptools>=61.0 2023-05-24T10:35:51,948 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.8.0-py3-none-any.whl (1.1 MB) 2023-05-24T10:35:55,229 Collecting cython 2023-05-24T10:35:55,745 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.34-cp37-cp37m-linux_armv7l.whl (2.3 MB) 2023-05-24T10:36:00,295 Installing collected packages: setuptools, cython 2023-05-24T10:36:09,859 Creating /tmp/pip-build-env-qgce2coh/overlay/bin 2023-05-24T10:36:09,865 changing mode of /tmp/pip-build-env-qgce2coh/overlay/bin/cygdb to 755 2023-05-24T10:36:09,870 changing mode of /tmp/pip-build-env-qgce2coh/overlay/bin/cython to 755 2023-05-24T10:36:09,875 changing mode of /tmp/pip-build-env-qgce2coh/overlay/bin/cythonize to 755 2023-05-24T10:36:09,923 Successfully installed cython-0.29.34 setuptools-67.8.0 2023-05-24T10:36:10,449 Installing build dependencies: finished with status 'done' 2023-05-24T10:36:10,460 Getting requirements to build wheel: started 2023-05-24T10:36:10,463 Running command Getting requirements to build wheel 2023-05-24T10:36:12,335 creating tmp 2023-05-24T10:36:12,337 cc -c /tmp/tmpqjn5vvih.c -o tmp/tmpqjn5vvih.o -Wno-unused-function 2023-05-24T10:36:12,493 cc -c /tmp/tmpukuj25an.c -o tmp/tmpukuj25an.o -Wno-unused-result 2023-05-24T10:36:12,639 cc -c /tmp/tmpfv5zhy5b.c -o tmp/tmpfv5zhy5b.o -Wno-ignored-qualifiers 2023-05-24T10:36:12,784 cc -c /tmp/tmpmkfq32n8.c -o tmp/tmpmkfq32n8.o -Wno-deprecated-declarations 2023-05-24T10:36:12,960 make: *** No rule to make target 'clean'. Stop. 2023-05-24T10:36:17,070 Libs ['/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib'] 2023-05-24T10:36:17,071 Library dirs ['/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib'] 2023-05-24T10:36:17,071 Include dirs ['.', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/utils', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/wavefront', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/bindings/cpp', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/system', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/alignment', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa'] 2023-05-24T10:36:17,071 Compiling pywfa/align.pyx because it depends on /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/Cython/Includes/libc/string.pxd. 2023-05-24T10:36:17,072 [1/1] Cythonizing pywfa/align.pyx 2023-05-24T10:36:17,530 running egg_info 2023-05-24T10:36:17,545 writing pywfa.egg-info/PKG-INFO 2023-05-24T10:36:17,550 writing dependency_links to pywfa.egg-info/dependency_links.txt 2023-05-24T10:36:17,555 writing top-level names to pywfa.egg-info/top_level.txt 2023-05-24T10:36:17,596 reading manifest file 'pywfa.egg-info/SOURCES.txt' 2023-05-24T10:36:17,647 reading manifest template 'MANIFEST.in' 2023-05-24T10:36:17,736 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-05-24T10:36:17,737 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-05-24T10:36:17,737 warning: no files found matching 'WFA2_lib' under directory 'pywfa' 2023-05-24T10:36:17,757 adding license file 'LICENSE' 2023-05-24T10:36:17,783 writing manifest file 'pywfa.egg-info/SOURCES.txt' 2023-05-24T10:36:18,116 Getting requirements to build wheel: finished with status 'done' 2023-05-24T10:36:18,143 Installing backend dependencies: started 2023-05-24T10:36:18,145 Running command pip subprocess to install backend dependencies 2023-05-24T10:36:20,983 Using pip 23.1.2 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7) 2023-05-24T10:36:21,777 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-24T10:36:22,645 Collecting wheel 2023-05-24T10:36:22,684 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-05-24T10:36:26,186 Installing collected packages: wheel 2023-05-24T10:36:26,642 Creating /tmp/pip-build-env-qgce2coh/normal/bin 2023-05-24T10:36:26,647 changing mode of /tmp/pip-build-env-qgce2coh/normal/bin/wheel to 755 2023-05-24T10:36:26,674 Successfully installed wheel-0.40.0 2023-05-24T10:36:27,049 Installing backend dependencies: finished with status 'done' 2023-05-24T10:36:27,055 Created temporary directory: /tmp/pip-modern-metadata-chao67nh 2023-05-24T10:36:27,062 Preparing metadata (pyproject.toml): started 2023-05-24T10:36:27,064 Running command Preparing metadata (pyproject.toml) 2023-05-24T10:36:28,831 cc -c /tmp/tmpmiqigmn7.c -o tmp/tmpmiqigmn7.o -Wno-unused-function 2023-05-24T10:36:28,982 cc -c /tmp/tmpmgoxrmpn.c -o tmp/tmpmgoxrmpn.o -Wno-unused-result 2023-05-24T10:36:29,135 cc -c /tmp/tmpkc8htcyb.c -o tmp/tmpkc8htcyb.o -Wno-ignored-qualifiers 2023-05-24T10:36:29,283 cc -c /tmp/tmp_6n4qsz2.c -o tmp/tmp_6n4qsz2.o -Wno-deprecated-declarations 2023-05-24T10:36:29,460 make: *** No rule to make target 'clean'. Stop. 2023-05-24T10:36:30,730 Libs ['/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib'] 2023-05-24T10:36:30,731 Library dirs ['/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib'] 2023-05-24T10:36:30,731 Include dirs ['.', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/utils', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/wavefront', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/bindings/cpp', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/system', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/alignment', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa'] 2023-05-24T10:36:31,355 running dist_info 2023-05-24T10:36:31,370 creating /tmp/pip-modern-metadata-chao67nh/pywfa.egg-info 2023-05-24T10:36:31,384 writing /tmp/pip-modern-metadata-chao67nh/pywfa.egg-info/PKG-INFO 2023-05-24T10:36:31,389 writing dependency_links to /tmp/pip-modern-metadata-chao67nh/pywfa.egg-info/dependency_links.txt 2023-05-24T10:36:31,394 writing top-level names to /tmp/pip-modern-metadata-chao67nh/pywfa.egg-info/top_level.txt 2023-05-24T10:36:31,398 writing manifest file '/tmp/pip-modern-metadata-chao67nh/pywfa.egg-info/SOURCES.txt' 2023-05-24T10:36:31,441 reading manifest file '/tmp/pip-modern-metadata-chao67nh/pywfa.egg-info/SOURCES.txt' 2023-05-24T10:36:31,446 reading manifest template 'MANIFEST.in' 2023-05-24T10:36:31,527 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-05-24T10:36:31,527 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-05-24T10:36:31,527 warning: no files found matching 'WFA2_lib' under directory 'pywfa' 2023-05-24T10:36:31,548 adding license file 'LICENSE' 2023-05-24T10:36:31,567 writing manifest file '/tmp/pip-modern-metadata-chao67nh/pywfa.egg-info/SOURCES.txt' 2023-05-24T10:36:31,570 creating '/tmp/pip-modern-metadata-chao67nh/pywfa-0.4.2.dist-info' 2023-05-24T10:36:31,883 Preparing metadata (pyproject.toml): finished with status 'done' 2023-05-24T10:36:31,899 Source in /tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd has version 0.4.2, which satisfies requirement pywfa==0.4.2 from https://files.pythonhosted.org/packages/5d/92/366a9f0a0a4b34e2650199861a377eddf7e9f24ecc5298efb81352dc7cee/pywfa-0.4.2.tar.gz 2023-05-24T10:36:31,901 Removed pywfa==0.4.2 from https://files.pythonhosted.org/packages/5d/92/366a9f0a0a4b34e2650199861a377eddf7e9f24ecc5298efb81352dc7cee/pywfa-0.4.2.tar.gz from build tracker '/tmp/pip-build-tracker-mo_39j2o' 2023-05-24T10:36:31,918 Created temporary directory: /tmp/pip-unpack-_cl_2wiy 2023-05-24T10:36:31,919 Building wheels for collected packages: pywfa 2023-05-24T10:36:31,929 Created temporary directory: /tmp/pip-wheel-l05q6zlg 2023-05-24T10:36:31,929 Destination directory: /tmp/pip-wheel-l05q6zlg 2023-05-24T10:36:31,934 Building wheel for pywfa (pyproject.toml): started 2023-05-24T10:36:31,936 Running command Building wheel for pywfa (pyproject.toml) 2023-05-24T10:36:33,649 cc -c /tmp/tmp4uensnub.c -o tmp/tmp4uensnub.o -Wno-unused-function 2023-05-24T10:36:33,795 cc -c /tmp/tmpyr8yzw3z.c -o tmp/tmpyr8yzw3z.o -Wno-unused-result 2023-05-24T10:36:33,941 cc -c /tmp/tmpesdmi61h.c -o tmp/tmpesdmi61h.o -Wno-ignored-qualifiers 2023-05-24T10:36:34,087 cc -c /tmp/tmp1del4bk0.c -o tmp/tmp1del4bk0.o -Wno-deprecated-declarations 2023-05-24T10:36:34,261 make: *** No rule to make target 'clean'. Stop. 2023-05-24T10:36:35,526 Libs ['/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib'] 2023-05-24T10:36:35,526 Library dirs ['/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib'] 2023-05-24T10:36:35,527 Include dirs ['.', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/utils', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/wavefront', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/bindings/cpp', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/system', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/alignment', '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa'] 2023-05-24T10:36:36,101 running bdist_wheel 2023-05-24T10:36:36,142 running build 2023-05-24T10:36:36,143 running build_py 2023-05-24T10:36:36,143 running build_ext 2023-05-24T10:36:36,147 building 'pywfa.align' extension 2023-05-24T10:36:36,148 creating build 2023-05-24T10:36:36,149 creating build/temp.linux-armv7l-cpython-37 2023-05-24T10:36:36,151 creating build/temp.linux-armv7l-cpython-37/pywfa 2023-05-24T10:36:36,154 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I. -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/utils -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/wavefront -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/bindings/cpp -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/system -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/alignment -I/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa -I/usr/include/python3.7m -c pywfa/align.c -o build/temp.linux-armv7l-cpython-37/pywfa/align.o -Wno-unused-function -Wno-unused-result -Wno-ignored-qualifiers -Wno-deprecated-declarations 2023-05-24T10:37:10,374 creating build/lib 2023-05-24T10:37:10,375 creating build/lib/pywfa 2023-05-24T10:37:10,377 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pywfa/align.o /tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib/libwfa.a -L/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib -L/usr/lib -o build/lib/pywfa/align.cpython-37m-arm-linux-gnueabihf.so 2023-05-24T10:37:35,381 copying _custom_build.py -> build/lib 2023-05-24T10:37:35,389 copying pywfa/__init__.py -> build/lib/pywfa 2023-05-24T10:37:35,395 creating build/lib/pywfa/tests 2023-05-24T10:37:35,397 copying pywfa/tests/test.py -> build/lib/pywfa/tests 2023-05-24T10:37:35,402 copying pywfa/tests/__init__.py -> build/lib/pywfa/tests 2023-05-24T10:37:35,406 running egg_info 2023-05-24T10:37:35,436 writing pywfa.egg-info/PKG-INFO 2023-05-24T10:37:35,440 writing dependency_links to pywfa.egg-info/dependency_links.txt 2023-05-24T10:37:35,444 writing top-level names to pywfa.egg-info/top_level.txt 2023-05-24T10:37:35,466 reading manifest file 'pywfa.egg-info/SOURCES.txt' 2023-05-24T10:37:35,526 reading manifest template 'MANIFEST.in' 2023-05-24T10:37:35,608 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-05-24T10:37:35,609 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-05-24T10:37:35,609 warning: no library file corresponding to '/tmp/pip-wheel-zlvc3lxh/pywfa_17b6d7d15ea64fa195fb0421898cd5cd/pywfa/WFA2_lib/lib' found (skipping) 2023-05-24T10:37:35,610 warning: no files found matching 'WFA2_lib' under directory 'pywfa' 2023-05-24T10:37:35,629 adding license file 'LICENSE' 2023-05-24T10:37:35,655 writing manifest file 'pywfa.egg-info/SOURCES.txt' 2023-05-24T10:37:35,675 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.alignment' is absent from the `packages` configuration. 2023-05-24T10:37:35,676 !! 2023-05-24T10:37:35,676 ******************************************************************************** 2023-05-24T10:37:35,677 ############################ 2023-05-24T10:37:35,677 # Package would be ignored # 2023-05-24T10:37:35,677 ############################ 2023-05-24T10:37:35,678 Python recognizes 'pywfa.WFA2_lib.alignment' as an importable package[^1], 2023-05-24T10:37:35,678 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,679 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,679 package, please make sure that 'pywfa.WFA2_lib.alignment' is explicitly added 2023-05-24T10:37:35,679 to the `packages` configuration field. 2023-05-24T10:37:35,680 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,680 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,680 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,681 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,682 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,682 If you don't want 'pywfa.WFA2_lib.alignment' to be distributed and are 2023-05-24T10:37:35,683 already explicitly excluding 'pywfa.WFA2_lib.alignment' via 2023-05-24T10:37:35,683 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,683 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,684 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,684 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,685 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,686 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,686 even if it does not contain any `.py` files. 2023-05-24T10:37:35,686 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,687 directory, all directories are treated like packages. 2023-05-24T10:37:35,687 ******************************************************************************** 2023-05-24T10:37:35,687 !! 2023-05-24T10:37:35,688 check.warn(importable) 2023-05-24T10:37:35,688 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.build' is absent from the `packages` configuration. 2023-05-24T10:37:35,688 !! 2023-05-24T10:37:35,689 ******************************************************************************** 2023-05-24T10:37:35,689 ############################ 2023-05-24T10:37:35,690 # Package would be ignored # 2023-05-24T10:37:35,690 ############################ 2023-05-24T10:37:35,690 Python recognizes 'pywfa.WFA2_lib.build' as an importable package[^1], 2023-05-24T10:37:35,690 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,691 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,691 package, please make sure that 'pywfa.WFA2_lib.build' is explicitly added 2023-05-24T10:37:35,692 to the `packages` configuration field. 2023-05-24T10:37:35,692 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,693 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,693 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,693 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,694 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,695 If you don't want 'pywfa.WFA2_lib.build' to be distributed and are 2023-05-24T10:37:35,695 already explicitly excluding 'pywfa.WFA2_lib.build' via 2023-05-24T10:37:35,695 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,695 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,696 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,696 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,697 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,698 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,698 even if it does not contain any `.py` files. 2023-05-24T10:37:35,699 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,699 directory, all directories are treated like packages. 2023-05-24T10:37:35,699 ******************************************************************************** 2023-05-24T10:37:35,700 !! 2023-05-24T10:37:35,700 check.warn(importable) 2023-05-24T10:37:35,700 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.examples' is absent from the `packages` configuration. 2023-05-24T10:37:35,701 !! 2023-05-24T10:37:35,701 ******************************************************************************** 2023-05-24T10:37:35,702 ############################ 2023-05-24T10:37:35,702 # Package would be ignored # 2023-05-24T10:37:35,702 ############################ 2023-05-24T10:37:35,703 Python recognizes 'pywfa.WFA2_lib.examples' as an importable package[^1], 2023-05-24T10:37:35,703 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,703 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,704 package, please make sure that 'pywfa.WFA2_lib.examples' is explicitly added 2023-05-24T10:37:35,704 to the `packages` configuration field. 2023-05-24T10:37:35,705 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,705 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,705 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,706 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,706 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,707 If you don't want 'pywfa.WFA2_lib.examples' to be distributed and are 2023-05-24T10:37:35,707 already explicitly excluding 'pywfa.WFA2_lib.examples' via 2023-05-24T10:37:35,707 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,708 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,708 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,709 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,709 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,710 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,710 even if it does not contain any `.py` files. 2023-05-24T10:37:35,711 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,711 directory, all directories are treated like packages. 2023-05-24T10:37:35,711 ******************************************************************************** 2023-05-24T10:37:35,712 !! 2023-05-24T10:37:35,712 check.warn(importable) 2023-05-24T10:37:35,712 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.img' is absent from the `packages` configuration. 2023-05-24T10:37:35,713 !! 2023-05-24T10:37:35,713 ******************************************************************************** 2023-05-24T10:37:35,714 ############################ 2023-05-24T10:37:35,714 # Package would be ignored # 2023-05-24T10:37:35,714 ############################ 2023-05-24T10:37:35,714 Python recognizes 'pywfa.WFA2_lib.img' as an importable package[^1], 2023-05-24T10:37:35,715 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,715 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,716 package, please make sure that 'pywfa.WFA2_lib.img' is explicitly added 2023-05-24T10:37:35,716 to the `packages` configuration field. 2023-05-24T10:37:35,716 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,717 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,717 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,718 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,718 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,719 If you don't want 'pywfa.WFA2_lib.img' to be distributed and are 2023-05-24T10:37:35,719 already explicitly excluding 'pywfa.WFA2_lib.img' via 2023-05-24T10:37:35,719 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,720 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,720 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,721 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,721 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,722 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,722 even if it does not contain any `.py` files. 2023-05-24T10:37:35,723 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,723 directory, all directories are treated like packages. 2023-05-24T10:37:35,724 ******************************************************************************** 2023-05-24T10:37:35,724 !! 2023-05-24T10:37:35,725 check.warn(importable) 2023-05-24T10:37:35,725 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.lib' is absent from the `packages` configuration. 2023-05-24T10:37:35,726 !! 2023-05-24T10:37:35,726 ******************************************************************************** 2023-05-24T10:37:35,727 ############################ 2023-05-24T10:37:35,727 # Package would be ignored # 2023-05-24T10:37:35,727 ############################ 2023-05-24T10:37:35,728 Python recognizes 'pywfa.WFA2_lib.lib' as an importable package[^1], 2023-05-24T10:37:35,728 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,729 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,729 package, please make sure that 'pywfa.WFA2_lib.lib' is explicitly added 2023-05-24T10:37:35,729 to the `packages` configuration field. 2023-05-24T10:37:35,730 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,730 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,730 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,731 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,732 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,732 If you don't want 'pywfa.WFA2_lib.lib' to be distributed and are 2023-05-24T10:37:35,733 already explicitly excluding 'pywfa.WFA2_lib.lib' via 2023-05-24T10:37:35,733 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,737 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,737 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,738 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,738 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,739 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,740 even if it does not contain any `.py` files. 2023-05-24T10:37:35,740 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,741 directory, all directories are treated like packages. 2023-05-24T10:37:35,741 ******************************************************************************** 2023-05-24T10:37:35,742 !! 2023-05-24T10:37:35,742 check.warn(importable) 2023-05-24T10:37:35,743 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.scripts' is absent from the `packages` configuration. 2023-05-24T10:37:35,744 !! 2023-05-24T10:37:35,744 ******************************************************************************** 2023-05-24T10:37:35,745 ############################ 2023-05-24T10:37:35,745 # Package would be ignored # 2023-05-24T10:37:35,745 ############################ 2023-05-24T10:37:35,746 Python recognizes 'pywfa.WFA2_lib.scripts' as an importable package[^1], 2023-05-24T10:37:35,746 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,747 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,747 package, please make sure that 'pywfa.WFA2_lib.scripts' is explicitly added 2023-05-24T10:37:35,747 to the `packages` configuration field. 2023-05-24T10:37:35,748 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,748 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,749 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,749 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,750 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,750 If you don't want 'pywfa.WFA2_lib.scripts' to be distributed and are 2023-05-24T10:37:35,751 already explicitly excluding 'pywfa.WFA2_lib.scripts' via 2023-05-24T10:37:35,751 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,752 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,752 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,752 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,753 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,754 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,754 even if it does not contain any `.py` files. 2023-05-24T10:37:35,755 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,755 directory, all directories are treated like packages. 2023-05-24T10:37:35,755 ******************************************************************************** 2023-05-24T10:37:35,757 !! 2023-05-24T10:37:35,757 check.warn(importable) 2023-05-24T10:37:35,778 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.system' is absent from the `packages` configuration. 2023-05-24T10:37:35,779 !! 2023-05-24T10:37:35,780 ******************************************************************************** 2023-05-24T10:37:35,780 ############################ 2023-05-24T10:37:35,780 # Package would be ignored # 2023-05-24T10:37:35,781 ############################ 2023-05-24T10:37:35,781 Python recognizes 'pywfa.WFA2_lib.system' as an importable package[^1], 2023-05-24T10:37:35,781 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,782 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,782 package, please make sure that 'pywfa.WFA2_lib.system' is explicitly added 2023-05-24T10:37:35,783 to the `packages` configuration field. 2023-05-24T10:37:35,784 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,784 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,785 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,786 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,788 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,789 If you don't want 'pywfa.WFA2_lib.system' to be distributed and are 2023-05-24T10:37:35,789 already explicitly excluding 'pywfa.WFA2_lib.system' via 2023-05-24T10:37:35,789 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,790 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,790 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,791 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,791 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,792 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,793 even if it does not contain any `.py` files. 2023-05-24T10:37:35,793 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,793 directory, all directories are treated like packages. 2023-05-24T10:37:35,794 ******************************************************************************** 2023-05-24T10:37:35,794 !! 2023-05-24T10:37:35,794 check.warn(importable) 2023-05-24T10:37:35,795 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.tools' is absent from the `packages` configuration. 2023-05-24T10:37:35,795 !! 2023-05-24T10:37:35,802 ******************************************************************************** 2023-05-24T10:37:35,802 ############################ 2023-05-24T10:37:35,803 # Package would be ignored # 2023-05-24T10:37:35,804 ############################ 2023-05-24T10:37:35,804 Python recognizes 'pywfa.WFA2_lib.tools' as an importable package[^1], 2023-05-24T10:37:35,805 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:35,807 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:35,807 package, please make sure that 'pywfa.WFA2_lib.tools' is explicitly added 2023-05-24T10:37:35,808 to the `packages` configuration field. 2023-05-24T10:37:35,809 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:35,810 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:35,811 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:35,813 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:35,814 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:35,816 If you don't want 'pywfa.WFA2_lib.tools' to be distributed and are 2023-05-24T10:37:35,817 already explicitly excluding 'pywfa.WFA2_lib.tools' via 2023-05-24T10:37:35,818 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:35,818 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:35,819 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:35,822 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:35,823 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:35,824 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:35,824 even if it does not contain any `.py` files. 2023-05-24T10:37:35,825 On the other hand, currently there is no concept of package data 2023-05-24T10:37:35,825 directory, all directories are treated like packages. 2023-05-24T10:37:35,825 ******************************************************************************** 2023-05-24T10:37:35,826 !! 2023-05-24T10:37:35,826 check.warn(importable) 2023-05-24T10:37:35,827 copying pywfa/.DS_Store -> build/lib/pywfa 2023-05-24T10:37:35,827 copying pywfa/WFA_wrap.c -> build/lib/pywfa 2023-05-24T10:37:35,827 copying pywfa/WFA_wrap.pxd -> build/lib/pywfa 2023-05-24T10:37:35,827 copying pywfa/align.c -> build/lib/pywfa 2023-05-24T10:37:35,828 copying pywfa/align.cpython-310-darwin.so -> build/lib/pywfa 2023-05-24T10:37:35,828 copying pywfa/align.cpython-39-darwin.so -> build/lib/pywfa 2023-05-24T10:37:35,845 copying pywfa/align.pxd -> build/lib/pywfa 2023-05-24T10:37:35,849 copying pywfa/align.pyx -> build/lib/pywfa 2023-05-24T10:37:35,855 copying pywfa/tests/long.fa -> build/lib/pywfa/tests 2023-05-24T10:37:35,860 copying pywfa/tests/long.reference.fa -> build/lib/pywfa/tests 2023-05-24T10:37:35,864 copying pywfa/tests/short.fa -> build/lib/pywfa/tests 2023-05-24T10:37:35,869 copying pywfa/tests/short.reference.fa -> build/lib/pywfa/tests 2023-05-24T10:37:35,874 creating build/lib/pywfa/WFA2_lib 2023-05-24T10:37:35,876 creating build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,878 copying pywfa/WFA2_lib/alignment/Makefile -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,884 copying pywfa/WFA2_lib/alignment/affine2p_penalties.c -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,889 copying pywfa/WFA2_lib/alignment/affine2p_penalties.h -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,894 copying pywfa/WFA2_lib/alignment/affine_penalties.c -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,899 copying pywfa/WFA2_lib/alignment/affine_penalties.h -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,903 copying pywfa/WFA2_lib/alignment/cigar.c -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,909 copying pywfa/WFA2_lib/alignment/cigar.h -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,913 copying pywfa/WFA2_lib/alignment/linear_penalties.h -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,917 copying pywfa/WFA2_lib/alignment/score_matrix.c -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,921 copying pywfa/WFA2_lib/alignment/score_matrix.h -> build/lib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:35,926 creating build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,928 copying pywfa/WFA2_lib/build/affine2p_penalties.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,932 copying pywfa/WFA2_lib/build/affine_penalties.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,936 copying pywfa/WFA2_lib/build/bitmap.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,941 copying pywfa/WFA2_lib/build/cigar.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,947 copying pywfa/WFA2_lib/build/commons.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,952 copying pywfa/WFA2_lib/build/dna_text.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,956 copying pywfa/WFA2_lib/build/heatmap.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,961 copying pywfa/WFA2_lib/build/mm_allocator.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,967 copying pywfa/WFA2_lib/build/mm_stack.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,973 copying pywfa/WFA2_lib/build/profiler_counter.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,979 copying pywfa/WFA2_lib/build/profiler_timer.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,985 copying pywfa/WFA2_lib/build/score_matrix.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,991 copying pywfa/WFA2_lib/build/sequence_buffer.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:35,997 copying pywfa/WFA2_lib/build/string_padded.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,002 copying pywfa/WFA2_lib/build/vector.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,007 copying pywfa/WFA2_lib/build/wavefront.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,012 copying pywfa/WFA2_lib/build/wavefront_align.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,018 copying pywfa/WFA2_lib/build/wavefront_aligner.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,025 copying pywfa/WFA2_lib/build/wavefront_attributes.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,030 copying pywfa/WFA2_lib/build/wavefront_backtrace.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,037 copying pywfa/WFA2_lib/build/wavefront_backtrace_buffer.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,043 copying pywfa/WFA2_lib/build/wavefront_backtrace_offload.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,049 copying pywfa/WFA2_lib/build/wavefront_bialign.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,056 copying pywfa/WFA2_lib/build/wavefront_components.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,063 copying pywfa/WFA2_lib/build/wavefront_compute.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,069 copying pywfa/WFA2_lib/build/wavefront_compute_affine.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,075 copying pywfa/WFA2_lib/build/wavefront_compute_affine2p.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,082 copying pywfa/WFA2_lib/build/wavefront_compute_edit.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,090 copying pywfa/WFA2_lib/build/wavefront_compute_linear.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,096 copying pywfa/WFA2_lib/build/wavefront_debug.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,102 copying pywfa/WFA2_lib/build/wavefront_display.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,108 copying pywfa/WFA2_lib/build/wavefront_extend.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,114 copying pywfa/WFA2_lib/build/wavefront_heuristic.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,121 copying pywfa/WFA2_lib/build/wavefront_pcigar.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,127 copying pywfa/WFA2_lib/build/wavefront_penalties.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,132 copying pywfa/WFA2_lib/build/wavefront_plot.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,138 copying pywfa/WFA2_lib/build/wavefront_slab.o -> build/lib/pywfa/WFA2_lib/build 2023-05-24T10:37:36,144 creating build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,145 copying pywfa/WFA2_lib/examples/Makefile -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,150 copying pywfa/WFA2_lib/examples/README.md -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,154 copying pywfa/WFA2_lib/examples/wfa_adapt.c -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,158 copying pywfa/WFA2_lib/examples/wfa_basic.c -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,162 copying pywfa/WFA2_lib/examples/wfa_bindings.cpp -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,166 copying pywfa/WFA2_lib/examples/wfa_lambda.cpp -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,170 copying pywfa/WFA2_lib/examples/wfa_repeated.c -> build/lib/pywfa/WFA2_lib/examples 2023-05-24T10:37:36,174 creating build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,176 copying pywfa/WFA2_lib/img/heuristics.aband.10.10.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,199 copying pywfa/WFA2_lib/img/heuristics.aband.50.50.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,222 copying pywfa/WFA2_lib/img/heuristics.band.10.10.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,245 copying pywfa/WFA2_lib/img/heuristics.band.10.150.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,269 copying pywfa/WFA2_lib/img/heuristics.none.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,306 copying pywfa/WFA2_lib/img/heuristics.wfadap.10.50.1.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,335 copying pywfa/WFA2_lib/img/heuristics.wfadap.10.50.10.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,375 copying pywfa/WFA2_lib/img/wfa.vs.swg.png -> build/lib/pywfa/WFA2_lib/img 2023-05-24T10:37:36,424 creating build/lib/pywfa/WFA2_lib/lib 2023-05-24T10:37:36,425 copying pywfa/WFA2_lib/lib/libwfa.a -> build/lib/pywfa/WFA2_lib/lib 2023-05-24T10:37:36,471 creating build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,472 copying pywfa/WFA2_lib/scripts/fasta2seq.sh -> build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,477 copying pywfa/WFA2_lib/scripts/seq2fasta.sh -> build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,481 copying pywfa/WFA2_lib/scripts/wfa.alg.cmp.py -> build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,486 copying pywfa/WFA2_lib/scripts/wfa.alg.cmp.score.sh -> build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,490 copying pywfa/WFA2_lib/scripts/wfa.alg.rescore.py -> build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,495 copying pywfa/WFA2_lib/scripts/wfa2png.py -> build/lib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:36,500 creating build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,502 copying pywfa/WFA2_lib/system/Makefile -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,507 copying pywfa/WFA2_lib/system/mm_allocator.c -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,513 copying pywfa/WFA2_lib/system/mm_allocator.h -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,517 copying pywfa/WFA2_lib/system/mm_stack.c -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,523 copying pywfa/WFA2_lib/system/mm_stack.h -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,527 copying pywfa/WFA2_lib/system/profiler_counter.c -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,532 copying pywfa/WFA2_lib/system/profiler_counter.h -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,536 copying pywfa/WFA2_lib/system/profiler_timer.c -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,542 copying pywfa/WFA2_lib/system/profiler_timer.h -> build/lib/pywfa/WFA2_lib/system 2023-05-24T10:37:36,546 creating build/lib/pywfa/WFA2_lib/tools 2023-05-24T10:37:36,548 copying pywfa/WFA2_lib/tools/.DS_Store -> build/lib/pywfa/WFA2_lib/tools 2023-05-24T10:37:36,553 copying pywfa/WFA2_lib/tools/README.md -> build/lib/pywfa/WFA2_lib/tools 2023-05-24T10:37:36,559 creating build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,560 copying pywfa/WFA2_lib/utils/Makefile -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,565 copying pywfa/WFA2_lib/utils/bitmap.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,570 copying pywfa/WFA2_lib/utils/bitmap.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,574 copying pywfa/WFA2_lib/utils/commons.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,579 copying pywfa/WFA2_lib/utils/commons.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,584 copying pywfa/WFA2_lib/utils/dna_text.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,588 copying pywfa/WFA2_lib/utils/dna_text.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,593 copying pywfa/WFA2_lib/utils/heatmap.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,598 copying pywfa/WFA2_lib/utils/heatmap.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,602 copying pywfa/WFA2_lib/utils/sequence_buffer.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,608 copying pywfa/WFA2_lib/utils/sequence_buffer.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,612 copying pywfa/WFA2_lib/utils/string_padded.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,617 copying pywfa/WFA2_lib/utils/string_padded.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,621 copying pywfa/WFA2_lib/utils/vector.c -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,625 copying pywfa/WFA2_lib/utils/vector.h -> build/lib/pywfa/WFA2_lib/utils 2023-05-24T10:37:36,630 creating build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,632 copying pywfa/WFA2_lib/wavefront/Makefile -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,636 copying pywfa/WFA2_lib/wavefront/wavefront.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,641 copying pywfa/WFA2_lib/wavefront/wavefront.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,646 copying pywfa/WFA2_lib/wavefront/wavefront_align.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,651 copying pywfa/WFA2_lib/wavefront/wavefront_align.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,655 copying pywfa/WFA2_lib/wavefront/wavefront_aligner.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,660 copying pywfa/WFA2_lib/wavefront/wavefront_aligner.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,665 copying pywfa/WFA2_lib/wavefront/wavefront_attributes.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,669 copying pywfa/WFA2_lib/wavefront/wavefront_attributes.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,675 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,680 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,684 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,690 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,695 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,700 copying pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,705 copying pywfa/WFA2_lib/wavefront/wavefront_bialign.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,710 copying pywfa/WFA2_lib/wavefront/wavefront_bialign.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,715 copying pywfa/WFA2_lib/wavefront/wavefront_components.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,721 copying pywfa/WFA2_lib/wavefront/wavefront_components.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,725 copying pywfa/WFA2_lib/wavefront/wavefront_compute.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,731 copying pywfa/WFA2_lib/wavefront/wavefront_compute.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,735 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,741 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,746 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,751 copying pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,756 copying pywfa/WFA2_lib/wavefront/wavefront_compute_edit.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,761 copying pywfa/WFA2_lib/wavefront/wavefront_compute_edit.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,766 copying pywfa/WFA2_lib/wavefront/wavefront_compute_linear.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,771 copying pywfa/WFA2_lib/wavefront/wavefront_compute_linear.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,775 copying pywfa/WFA2_lib/wavefront/wavefront_debug.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,780 copying pywfa/WFA2_lib/wavefront/wavefront_debug.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,784 copying pywfa/WFA2_lib/wavefront/wavefront_display.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,789 copying pywfa/WFA2_lib/wavefront/wavefront_display.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,793 copying pywfa/WFA2_lib/wavefront/wavefront_extend.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,799 copying pywfa/WFA2_lib/wavefront/wavefront_extend.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,803 copying pywfa/WFA2_lib/wavefront/wavefront_heuristic.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,809 copying pywfa/WFA2_lib/wavefront/wavefront_heuristic.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,814 copying pywfa/WFA2_lib/wavefront/wavefront_offset.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,818 copying pywfa/WFA2_lib/wavefront/wavefront_pcigar.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,823 copying pywfa/WFA2_lib/wavefront/wavefront_pcigar.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,828 copying pywfa/WFA2_lib/wavefront/wavefront_penalties.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,834 copying pywfa/WFA2_lib/wavefront/wavefront_penalties.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,838 copying pywfa/WFA2_lib/wavefront/wavefront_plot.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,843 copying pywfa/WFA2_lib/wavefront/wavefront_plot.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,847 copying pywfa/WFA2_lib/wavefront/wavefront_slab.c -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,853 copying pywfa/WFA2_lib/wavefront/wavefront_slab.h -> build/lib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:36,882 installing to build/bdist.linux-armv7l/wheel 2023-05-24T10:37:36,882 running install 2023-05-24T10:37:36,945 running install_lib 2023-05-24T10:37:36,957 creating build/bdist.linux-armv7l 2023-05-24T10:37:36,958 creating build/bdist.linux-armv7l/wheel 2023-05-24T10:37:36,959 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data 2023-05-24T10:37:36,961 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib 2023-05-24T10:37:36,963 copying build/lib/_custom_build.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib 2023-05-24T10:37:36,968 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:36,970 copying build/lib/pywfa/align.cpython-310-darwin.so -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:37,006 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib 2023-05-24T10:37:37,010 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,012 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_plot.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,016 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,021 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_penalties.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,025 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_slab.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,030 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_align.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,033 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_edit.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,037 copying build/lib/pywfa/WFA2_lib/wavefront/Makefile -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,040 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_backtrace.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,044 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_attributes.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,048 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_plot.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,053 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_components.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,058 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_debug.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,062 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,066 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_bialign.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,071 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_edit.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,076 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,082 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,087 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,092 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_heuristic.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,096 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_align.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,101 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_components.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,105 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,109 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,112 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_pcigar.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,116 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_heuristic.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,122 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,126 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_bialign.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,129 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,133 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_debug.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,138 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_aligner.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,143 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_penalties.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,147 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_pcigar.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,152 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_slab.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,155 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_aligner.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,160 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,164 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_offset.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,168 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_extend.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,172 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_display.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,176 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_extend.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,181 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_linear.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,185 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_display.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,189 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,194 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_backtrace.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,199 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute_linear.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,204 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_compute.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,207 copying build/lib/pywfa/WFA2_lib/wavefront/wavefront_attributes.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront 2023-05-24T10:37:37,212 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,214 copying build/lib/pywfa/WFA2_lib/scripts/fasta2seq.sh -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,217 copying build/lib/pywfa/WFA2_lib/scripts/wfa.alg.rescore.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,222 copying build/lib/pywfa/WFA2_lib/scripts/wfa2png.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,227 copying build/lib/pywfa/WFA2_lib/scripts/wfa.alg.cmp.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,232 copying build/lib/pywfa/WFA2_lib/scripts/seq2fasta.sh -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,235 copying build/lib/pywfa/WFA2_lib/scripts/wfa.alg.cmp.score.sh -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts 2023-05-24T10:37:37,240 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,242 copying build/lib/pywfa/WFA2_lib/system/mm_allocator.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,247 copying build/lib/pywfa/WFA2_lib/system/profiler_timer.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,251 copying build/lib/pywfa/WFA2_lib/system/Makefile -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,255 copying build/lib/pywfa/WFA2_lib/system/profiler_timer.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,258 copying build/lib/pywfa/WFA2_lib/system/profiler_counter.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,263 copying build/lib/pywfa/WFA2_lib/system/mm_stack.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,267 copying build/lib/pywfa/WFA2_lib/system/profiler_counter.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,271 copying build/lib/pywfa/WFA2_lib/system/mm_stack.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,275 copying build/lib/pywfa/WFA2_lib/system/mm_allocator.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system 2023-05-24T10:37:37,284 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,286 copying build/lib/pywfa/WFA2_lib/build/wavefront.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,291 copying build/lib/pywfa/WFA2_lib/build/affine2p_penalties.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,295 copying build/lib/pywfa/WFA2_lib/build/string_padded.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,300 copying build/lib/pywfa/WFA2_lib/build/wavefront_display.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,306 copying build/lib/pywfa/WFA2_lib/build/wavefront_penalties.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,311 copying build/lib/pywfa/WFA2_lib/build/wavefront_debug.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,316 copying build/lib/pywfa/WFA2_lib/build/wavefront_compute_edit.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,323 copying build/lib/pywfa/WFA2_lib/build/wavefront_aligner.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,328 copying build/lib/pywfa/WFA2_lib/build/wavefront_components.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,334 copying build/lib/pywfa/WFA2_lib/build/mm_stack.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,339 copying build/lib/pywfa/WFA2_lib/build/wavefront_compute_affine.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,345 copying build/lib/pywfa/WFA2_lib/build/wavefront_backtrace.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,351 copying build/lib/pywfa/WFA2_lib/build/wavefront_extend.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,356 copying build/lib/pywfa/WFA2_lib/build/affine_penalties.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,360 copying build/lib/pywfa/WFA2_lib/build/wavefront_bialign.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,366 copying build/lib/pywfa/WFA2_lib/build/mm_allocator.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,373 copying build/lib/pywfa/WFA2_lib/build/wavefront_backtrace_offload.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,378 copying build/lib/pywfa/WFA2_lib/build/wavefront_compute_linear.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,384 copying build/lib/pywfa/WFA2_lib/build/wavefront_compute_affine2p.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,389 copying build/lib/pywfa/WFA2_lib/build/bitmap.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,394 copying build/lib/pywfa/WFA2_lib/build/wavefront_backtrace_buffer.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,399 copying build/lib/pywfa/WFA2_lib/build/wavefront_plot.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,405 copying build/lib/pywfa/WFA2_lib/build/wavefront_heuristic.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,411 copying build/lib/pywfa/WFA2_lib/build/commons.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,415 copying build/lib/pywfa/WFA2_lib/build/dna_text.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,419 copying build/lib/pywfa/WFA2_lib/build/wavefront_attributes.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,424 copying build/lib/pywfa/WFA2_lib/build/wavefront_slab.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,429 copying build/lib/pywfa/WFA2_lib/build/cigar.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,435 copying build/lib/pywfa/WFA2_lib/build/profiler_timer.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,441 copying build/lib/pywfa/WFA2_lib/build/profiler_counter.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,446 copying build/lib/pywfa/WFA2_lib/build/wavefront_compute.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,452 copying build/lib/pywfa/WFA2_lib/build/score_matrix.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,457 copying build/lib/pywfa/WFA2_lib/build/heatmap.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,461 copying build/lib/pywfa/WFA2_lib/build/wavefront_pcigar.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,466 copying build/lib/pywfa/WFA2_lib/build/sequence_buffer.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,471 copying build/lib/pywfa/WFA2_lib/build/vector.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,477 copying build/lib/pywfa/WFA2_lib/build/wavefront_align.o -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build 2023-05-24T10:37:37,484 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,486 copying build/lib/pywfa/WFA2_lib/examples/Makefile -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,490 copying build/lib/pywfa/WFA2_lib/examples/wfa_lambda.cpp -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,494 copying build/lib/pywfa/WFA2_lib/examples/wfa_bindings.cpp -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,498 copying build/lib/pywfa/WFA2_lib/examples/wfa_repeated.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,502 copying build/lib/pywfa/WFA2_lib/examples/wfa_basic.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,506 copying build/lib/pywfa/WFA2_lib/examples/README.md -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,510 copying build/lib/pywfa/WFA2_lib/examples/wfa_adapt.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples 2023-05-24T10:37:37,516 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/lib 2023-05-24T10:37:37,518 copying build/lib/pywfa/WFA2_lib/lib/libwfa.a -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/lib 2023-05-24T10:37:37,567 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,569 copying build/lib/pywfa/WFA2_lib/utils/sequence_buffer.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,573 copying build/lib/pywfa/WFA2_lib/utils/Makefile -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,576 copying build/lib/pywfa/WFA2_lib/utils/dna_text.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,580 copying build/lib/pywfa/WFA2_lib/utils/commons.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,584 copying build/lib/pywfa/WFA2_lib/utils/vector.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,588 copying build/lib/pywfa/WFA2_lib/utils/bitmap.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,593 copying build/lib/pywfa/WFA2_lib/utils/sequence_buffer.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,597 copying build/lib/pywfa/WFA2_lib/utils/heatmap.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,601 copying build/lib/pywfa/WFA2_lib/utils/bitmap.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,605 copying build/lib/pywfa/WFA2_lib/utils/string_padded.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,608 copying build/lib/pywfa/WFA2_lib/utils/commons.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,613 copying build/lib/pywfa/WFA2_lib/utils/vector.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,617 copying build/lib/pywfa/WFA2_lib/utils/string_padded.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,622 copying build/lib/pywfa/WFA2_lib/utils/dna_text.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,626 copying build/lib/pywfa/WFA2_lib/utils/heatmap.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils 2023-05-24T10:37:37,631 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,632 copying build/lib/pywfa/WFA2_lib/img/wfa.vs.swg.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,690 copying build/lib/pywfa/WFA2_lib/img/heuristics.none.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,720 copying build/lib/pywfa/WFA2_lib/img/heuristics.band.10.150.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,750 copying build/lib/pywfa/WFA2_lib/img/heuristics.aband.50.50.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,786 copying build/lib/pywfa/WFA2_lib/img/heuristics.wfadap.10.50.10.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,824 copying build/lib/pywfa/WFA2_lib/img/heuristics.wfadap.10.50.1.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,848 copying build/lib/pywfa/WFA2_lib/img/heuristics.aband.10.10.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,871 copying build/lib/pywfa/WFA2_lib/img/heuristics.band.10.10.png -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img 2023-05-24T10:37:37,895 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,897 copying build/lib/pywfa/WFA2_lib/alignment/Makefile -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,901 copying build/lib/pywfa/WFA2_lib/alignment/cigar.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,906 copying build/lib/pywfa/WFA2_lib/alignment/affine_penalties.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,909 copying build/lib/pywfa/WFA2_lib/alignment/affine2p_penalties.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,913 copying build/lib/pywfa/WFA2_lib/alignment/affine2p_penalties.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,917 copying build/lib/pywfa/WFA2_lib/alignment/affine_penalties.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,921 copying build/lib/pywfa/WFA2_lib/alignment/linear_penalties.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,924 copying build/lib/pywfa/WFA2_lib/alignment/cigar.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,928 copying build/lib/pywfa/WFA2_lib/alignment/score_matrix.h -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,932 copying build/lib/pywfa/WFA2_lib/alignment/score_matrix.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment 2023-05-24T10:37:37,936 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/tools 2023-05-24T10:37:37,938 copying build/lib/pywfa/WFA2_lib/tools/.DS_Store -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/tools 2023-05-24T10:37:37,942 copying build/lib/pywfa/WFA2_lib/tools/README.md -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/tools 2023-05-24T10:37:37,947 copying build/lib/pywfa/align.cpython-39-darwin.so -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:37,972 copying build/lib/pywfa/WFA_wrap.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:37,982 copying build/lib/pywfa/WFA_wrap.pxd -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:37,988 copying build/lib/pywfa/.DS_Store -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:37,993 copying build/lib/pywfa/__init__.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:37,998 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:37,999 copying build/lib/pywfa/tests/test.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:38,004 copying build/lib/pywfa/tests/long.fa -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:38,007 copying build/lib/pywfa/tests/long.reference.fa -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:38,010 copying build/lib/pywfa/tests/short.fa -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:38,014 copying build/lib/pywfa/tests/short.reference.fa -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:38,018 copying build/lib/pywfa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa/tests 2023-05-24T10:37:38,020 copying build/lib/pywfa/align.pyx -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:38,025 copying build/lib/pywfa/align.c -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:38,068 copying build/lib/pywfa/align.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:38,097 copying build/lib/pywfa/align.pxd -> build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa 2023-05-24T10:37:38,101 running install_egg_info 2023-05-24T10:37:38,113 Copying pywfa.egg-info to build/bdist.linux-armv7l/wheel/pywfa-0.4.2.data/platlib/pywfa-0.4.2-py3.7.egg-info 2023-05-24T10:37:38,130 running install_scripts 2023-05-24T10:37:38,159 creating build/bdist.linux-armv7l/wheel/pywfa-0.4.2.dist-info/WHEEL 2023-05-24T10:37:38,165 creating '/tmp/pip-wheel-l05q6zlg/.tmp-pmbr0x6p/pywfa-0.4.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-24T10:37:38,172 adding 'pywfa-0.4.2.data/platlib/_custom_build.py' 2023-05-24T10:37:38,176 adding 'pywfa-0.4.2.data/platlib/pywfa/.DS_Store' 2023-05-24T10:37:38,204 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA_wrap.c' 2023-05-24T10:37:38,212 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA_wrap.pxd' 2023-05-24T10:37:38,215 adding 'pywfa-0.4.2.data/platlib/pywfa/__init__.py' 2023-05-24T10:37:38,339 adding 'pywfa-0.4.2.data/platlib/pywfa/align.c' 2023-05-24T10:37:38,574 adding 'pywfa-0.4.2.data/platlib/pywfa/align.cpython-310-darwin.so' 2023-05-24T10:37:38,723 adding 'pywfa-0.4.2.data/platlib/pywfa/align.cpython-37m-arm-linux-gnueabihf.so' 2023-05-24T10:37:38,869 adding 'pywfa-0.4.2.data/platlib/pywfa/align.cpython-39-darwin.so' 2023-05-24T10:37:38,879 adding 'pywfa-0.4.2.data/platlib/pywfa/align.pxd' 2023-05-24T10:37:38,885 adding 'pywfa-0.4.2.data/platlib/pywfa/align.pyx' 2023-05-24T10:37:38,892 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/Makefile' 2023-05-24T10:37:38,894 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/affine2p_penalties.c' 2023-05-24T10:37:38,897 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/affine2p_penalties.h' 2023-05-24T10:37:38,900 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/affine_penalties.c' 2023-05-24T10:37:38,903 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/affine_penalties.h' 2023-05-24T10:37:38,908 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/cigar.c' 2023-05-24T10:37:38,911 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/cigar.h' 2023-05-24T10:37:38,914 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/linear_penalties.h' 2023-05-24T10:37:38,917 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/score_matrix.c' 2023-05-24T10:37:38,920 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/alignment/score_matrix.h' 2023-05-24T10:37:38,925 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/affine2p_penalties.o' 2023-05-24T10:37:38,928 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/affine_penalties.o' 2023-05-24T10:37:38,933 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/bitmap.o' 2023-05-24T10:37:38,945 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/cigar.o' 2023-05-24T10:37:38,950 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/commons.o' 2023-05-24T10:37:38,953 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/dna_text.o' 2023-05-24T10:37:38,959 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/heatmap.o' 2023-05-24T10:37:38,973 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/mm_allocator.o' 2023-05-24T10:37:38,982 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/mm_stack.o' 2023-05-24T10:37:38,991 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/profiler_counter.o' 2023-05-24T10:37:39,002 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/profiler_timer.o' 2023-05-24T10:37:39,008 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/score_matrix.o' 2023-05-24T10:37:39,014 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/sequence_buffer.o' 2023-05-24T10:37:39,020 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/string_padded.o' 2023-05-24T10:37:39,025 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/vector.o' 2023-05-24T10:37:39,031 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront.o' 2023-05-24T10:37:39,044 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_align.o' 2023-05-24T10:37:39,059 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_aligner.o' 2023-05-24T10:37:39,064 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_attributes.o' 2023-05-24T10:37:39,079 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_backtrace.o' 2023-05-24T10:37:39,091 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_backtrace_buffer.o' 2023-05-24T10:37:39,102 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_backtrace_offload.o' 2023-05-24T10:37:39,118 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_bialign.o' 2023-05-24T10:37:39,132 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_components.o' 2023-05-24T10:37:39,147 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_compute.o' 2023-05-24T10:37:39,157 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_compute_affine.o' 2023-05-24T10:37:39,169 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_compute_affine2p.o' 2023-05-24T10:37:39,184 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_compute_edit.o' 2023-05-24T10:37:39,195 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_compute_linear.o' 2023-05-24T10:37:39,205 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_debug.o' 2023-05-24T10:37:39,219 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_display.o' 2023-05-24T10:37:39,230 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_extend.o' 2023-05-24T10:37:39,245 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_heuristic.o' 2023-05-24T10:37:39,255 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_pcigar.o' 2023-05-24T10:37:39,261 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_penalties.o' 2023-05-24T10:37:39,272 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_plot.o' 2023-05-24T10:37:39,280 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/build/wavefront_slab.o' 2023-05-24T10:37:39,284 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/Makefile' 2023-05-24T10:37:39,286 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/README.md' 2023-05-24T10:37:39,289 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/wfa_adapt.c' 2023-05-24T10:37:39,292 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/wfa_basic.c' 2023-05-24T10:37:39,295 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/wfa_bindings.cpp' 2023-05-24T10:37:39,298 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/wfa_lambda.cpp' 2023-05-24T10:37:39,301 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/examples/wfa_repeated.c' 2023-05-24T10:37:39,370 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.aband.10.10.png' 2023-05-24T10:37:39,468 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.aband.50.50.png' 2023-05-24T10:37:39,547 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.band.10.10.png' 2023-05-24T10:37:39,643 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.band.10.150.png' 2023-05-24T10:37:39,767 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.none.png' 2023-05-24T10:37:39,856 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.wfadap.10.50.1.png' 2023-05-24T10:37:39,976 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/heuristics.wfadap.10.50.10.png' 2023-05-24T10:37:40,242 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/img/wfa.vs.swg.png' 2023-05-24T10:37:40,579 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/lib/libwfa.a' 2023-05-24T10:37:40,600 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts/fasta2seq.sh' 2023-05-24T10:37:40,602 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts/seq2fasta.sh' 2023-05-24T10:37:40,606 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts/wfa.alg.cmp.py' 2023-05-24T10:37:40,609 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts/wfa.alg.cmp.score.sh' 2023-05-24T10:37:40,612 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts/wfa.alg.rescore.py' 2023-05-24T10:37:40,616 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/scripts/wfa2png.py' 2023-05-24T10:37:40,620 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/Makefile' 2023-05-24T10:37:40,627 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/mm_allocator.c' 2023-05-24T10:37:40,630 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/mm_allocator.h' 2023-05-24T10:37:40,634 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/mm_stack.c' 2023-05-24T10:37:40,637 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/mm_stack.h' 2023-05-24T10:37:40,641 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/profiler_counter.c' 2023-05-24T10:37:40,644 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/profiler_counter.h' 2023-05-24T10:37:40,648 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/profiler_timer.c' 2023-05-24T10:37:40,651 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/system/profiler_timer.h' 2023-05-24T10:37:40,655 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/tools/.DS_Store' 2023-05-24T10:37:40,660 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/tools/README.md' 2023-05-24T10:37:40,664 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/Makefile' 2023-05-24T10:37:40,667 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/bitmap.c' 2023-05-24T10:37:40,670 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/bitmap.h' 2023-05-24T10:37:40,673 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/commons.c' 2023-05-24T10:37:40,677 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/commons.h' 2023-05-24T10:37:40,680 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/dna_text.c' 2023-05-24T10:37:40,683 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/dna_text.h' 2023-05-24T10:37:40,686 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/heatmap.c' 2023-05-24T10:37:40,689 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/heatmap.h' 2023-05-24T10:37:40,693 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/sequence_buffer.c' 2023-05-24T10:37:40,696 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/sequence_buffer.h' 2023-05-24T10:37:40,699 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/string_padded.c' 2023-05-24T10:37:40,702 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/string_padded.h' 2023-05-24T10:37:40,705 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/vector.c' 2023-05-24T10:37:40,708 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/utils/vector.h' 2023-05-24T10:37:40,714 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/Makefile' 2023-05-24T10:37:40,717 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront.c' 2023-05-24T10:37:40,720 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront.h' 2023-05-24T10:37:40,726 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_align.c' 2023-05-24T10:37:40,729 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_align.h' 2023-05-24T10:37:40,734 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_aligner.c' 2023-05-24T10:37:40,738 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_aligner.h' 2023-05-24T10:37:40,742 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_attributes.c' 2023-05-24T10:37:40,745 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_attributes.h' 2023-05-24T10:37:40,750 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_backtrace.c' 2023-05-24T10:37:40,754 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_backtrace.h' 2023-05-24T10:37:40,759 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.c' 2023-05-24T10:37:40,763 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_buffer.h' 2023-05-24T10:37:40,767 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.c' 2023-05-24T10:37:40,770 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_backtrace_offload.h' 2023-05-24T10:37:40,776 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_bialign.c' 2023-05-24T10:37:40,779 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_bialign.h' 2023-05-24T10:37:40,784 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_components.c' 2023-05-24T10:37:40,788 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_components.h' 2023-05-24T10:37:40,793 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute.c' 2023-05-24T10:37:40,796 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute.h' 2023-05-24T10:37:40,800 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine.c' 2023-05-24T10:37:40,803 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine.h' 2023-05-24T10:37:40,807 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.c' 2023-05-24T10:37:40,810 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_affine2p.h' 2023-05-24T10:37:40,815 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_edit.c' 2023-05-24T10:37:40,818 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_edit.h' 2023-05-24T10:37:40,821 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_linear.c' 2023-05-24T10:37:40,824 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_compute_linear.h' 2023-05-24T10:37:40,828 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_debug.c' 2023-05-24T10:37:40,831 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_debug.h' 2023-05-24T10:37:40,835 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_display.c' 2023-05-24T10:37:40,837 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_display.h' 2023-05-24T10:37:40,842 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_extend.c' 2023-05-24T10:37:40,845 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_extend.h' 2023-05-24T10:37:40,851 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_heuristic.c' 2023-05-24T10:37:40,855 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_heuristic.h' 2023-05-24T10:37:40,857 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_offset.h' 2023-05-24T10:37:40,861 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_pcigar.c' 2023-05-24T10:37:40,864 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_pcigar.h' 2023-05-24T10:37:40,868 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_penalties.c' 2023-05-24T10:37:40,871 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_penalties.h' 2023-05-24T10:37:40,875 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_plot.c' 2023-05-24T10:37:40,878 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_plot.h' 2023-05-24T10:37:40,882 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_slab.c' 2023-05-24T10:37:40,886 adding 'pywfa-0.4.2.data/platlib/pywfa/WFA2_lib/wavefront/wavefront_slab.h' 2023-05-24T10:37:40,889 adding 'pywfa-0.4.2.data/platlib/pywfa/tests/__init__.py' 2023-05-24T10:37:40,892 adding 'pywfa-0.4.2.data/platlib/pywfa/tests/long.fa' 2023-05-24T10:37:40,895 adding 'pywfa-0.4.2.data/platlib/pywfa/tests/long.reference.fa' 2023-05-24T10:37:40,897 adding 'pywfa-0.4.2.data/platlib/pywfa/tests/short.fa' 2023-05-24T10:37:40,901 adding 'pywfa-0.4.2.data/platlib/pywfa/tests/short.reference.fa' 2023-05-24T10:37:40,904 adding 'pywfa-0.4.2.data/platlib/pywfa/tests/test.py' 2023-05-24T10:37:40,909 adding 'pywfa-0.4.2.dist-info/LICENSE' 2023-05-24T10:37:40,913 adding 'pywfa-0.4.2.dist-info/METADATA' 2023-05-24T10:37:40,915 adding 'pywfa-0.4.2.dist-info/WHEEL' 2023-05-24T10:37:40,917 adding 'pywfa-0.4.2.dist-info/top_level.txt' 2023-05-24T10:37:40,924 adding 'pywfa-0.4.2.dist-info/RECORD' 2023-05-24T10:37:41,072 removing build/bdist.linux-armv7l/wheel 2023-05-24T10:37:41,166 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.utils' is absent from the `packages` configuration. 2023-05-24T10:37:41,166 !! 2023-05-24T10:37:41,167 ******************************************************************************** 2023-05-24T10:37:41,167 ############################ 2023-05-24T10:37:41,168 # Package would be ignored # 2023-05-24T10:37:41,168 ############################ 2023-05-24T10:37:41,170 Python recognizes 'pywfa.WFA2_lib.utils' as an importable package[^1], 2023-05-24T10:37:41,170 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:41,171 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:41,171 package, please make sure that 'pywfa.WFA2_lib.utils' is explicitly added 2023-05-24T10:37:41,171 to the `packages` configuration field. 2023-05-24T10:37:41,172 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:41,172 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:41,173 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:41,173 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:41,174 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:41,175 If you don't want 'pywfa.WFA2_lib.utils' to be distributed and are 2023-05-24T10:37:41,175 already explicitly excluding 'pywfa.WFA2_lib.utils' via 2023-05-24T10:37:41,175 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:41,175 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:41,176 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:41,176 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:41,177 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:41,178 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:41,178 even if it does not contain any `.py` files. 2023-05-24T10:37:41,179 On the other hand, currently there is no concept of package data 2023-05-24T10:37:41,179 directory, all directories are treated like packages. 2023-05-24T10:37:41,180 ******************************************************************************** 2023-05-24T10:37:41,181 !! 2023-05-24T10:37:41,181 check.warn(importable) 2023-05-24T10:37:41,182 /tmp/pip-build-env-qgce2coh/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pywfa.WFA2_lib.wavefront' is absent from the `packages` configuration. 2023-05-24T10:37:41,182 !! 2023-05-24T10:37:41,183 ******************************************************************************** 2023-05-24T10:37:41,184 ############################ 2023-05-24T10:37:41,184 # Package would be ignored # 2023-05-24T10:37:41,185 ############################ 2023-05-24T10:37:41,185 Python recognizes 'pywfa.WFA2_lib.wavefront' as an importable package[^1], 2023-05-24T10:37:41,185 but it is absent from setuptools' `packages` configuration. 2023-05-24T10:37:41,186 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-24T10:37:41,187 package, please make sure that 'pywfa.WFA2_lib.wavefront' is explicitly added 2023-05-24T10:37:41,187 to the `packages` configuration field. 2023-05-24T10:37:41,188 Alternatively, you can also rely on setuptools' discovery methods 2023-05-24T10:37:41,189 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-24T10:37:41,189 instead of `find_packages(...)`/`find:`). 2023-05-24T10:37:41,190 You can read more about "package discovery" on setuptools documentation page: 2023-05-24T10:37:41,191 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-24T10:37:41,192 If you don't want 'pywfa.WFA2_lib.wavefront' to be distributed and are 2023-05-24T10:37:41,193 already explicitly excluding 'pywfa.WFA2_lib.wavefront' via 2023-05-24T10:37:41,193 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-24T10:37:41,194 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-24T10:37:41,194 combination with a more fine grained `package-data` configuration. 2023-05-24T10:37:41,195 You can read more about "package data files" on setuptools documentation page: 2023-05-24T10:37:41,196 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-24T10:37:41,197 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-24T10:37:41,197 even if it does not contain any `.py` files. 2023-05-24T10:37:41,198 On the other hand, currently there is no concept of package data 2023-05-24T10:37:41,198 directory, all directories are treated like packages. 2023-05-24T10:37:41,199 ******************************************************************************** 2023-05-24T10:37:41,199 !! 2023-05-24T10:37:41,200 check.warn(importable) 2023-05-24T10:37:41,438 Building wheel for pywfa (pyproject.toml): finished with status 'done' 2023-05-24T10:37:41,668 Created wheel for pywfa: filename=pywfa-0.4.2-py3-none-any.whl size=3748513 sha256=d9564e7692d318eb5fb46303238ced3000b975f8a2548b171f2f72dc5410e12a 2023-05-24T10:37:41,670 Stored in directory: /tmp/pip-ephem-wheel-cache-jp2vb_kt/wheels/12/ce/67/0dbecf9a41f8cd10372d29d7f9e3e821e0c972293509526f95 2023-05-24T10:37:41,715 Successfully built pywfa 2023-05-24T10:37:42,013 Removed build tracker: '/tmp/pip-build-tracker-mo_39j2o'