2023-05-25T13:39:59,381 Created temporary directory: /tmp/pip-build-tracker-30wd9a1i 2023-05-25T13:39:59,382 Initialized build tracking at /tmp/pip-build-tracker-30wd9a1i 2023-05-25T13:39:59,382 Created build tracker: /tmp/pip-build-tracker-30wd9a1i 2023-05-25T13:39:59,382 Entered build tracker: /tmp/pip-build-tracker-30wd9a1i 2023-05-25T13:39:59,383 Created temporary directory: /tmp/pip-wheel-9zot3o7g 2023-05-25T13:39:59,386 Created temporary directory: /tmp/pip-ephem-wheel-cache-1ikatieo 2023-05-25T13:39:59,409 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-25T13:39:59,412 2 location(s) to search for versions of funid: 2023-05-25T13:39:59,412 * https://pypi.org/simple/funid/ 2023-05-25T13:39:59,412 * https://www.piwheels.org/simple/funid/ 2023-05-25T13:39:59,413 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2023-05-25T13:39:59,413 Getting page https://pypi.org/simple/funid/ 2023-05-25T13:39:59,415 Found index url https://pypi.org/simple/ 2023-05-25T13:39:59,464 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2023-05-25T13:39:59,469 Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0 2023-05-25T13:39:59,469 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,470 Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2 2023-05-25T13:39:59,470 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,471 Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1 2023-05-25T13:39:59,471 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,472 Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0 2023-05-25T13:39:59,472 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,473 Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1 2023-05-25T13:39:59,473 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,474 Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4 2023-05-25T13:39:59,474 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,475 Found link https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.5 2023-05-25T13:39:59,475 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/b7/27/c64985b174cbfa662e2109d838292a69d1669ad6a3a36294ee03ce81ef2a/FunID-0.3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,475 Found link https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.6.1 2023-05-25T13:39:59,476 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/1f/44/739693947517bbc2e128df01ee142d72ee3358f7cc7daba4a3759fbf34bd/FunID-0.3.7-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,476 Found link https://files.pythonhosted.org/packages/a2/14/7ae571dd6e4b918e2a85ca1625481c5764c15f2f4ecebb64e738e4863c57/FunID-0.3.7.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.7 2023-05-25T13:39:59,476 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/89/e3/e48669d0fdeafd9b79bcd3b601ed05547df828c6f5a3cd0d733e28289738/FunID-0.3.8-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,477 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f4/45/d1bc4761848b0f4ece4dc47311a91a7e85668eb49b3bbc86843e4508dbc1/FunID-0.3.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,477 Found link https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.1 2023-05-25T13:39:59,478 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2023-05-25T13:39:59,478 Getting page https://www.piwheels.org/simple/funid/ 2023-05-25T13:39:59,479 Found index url https://www.piwheels.org/simple/ 2023-05-25T13:39:59,663 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2023-05-25T13:39:59,666 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.7-py3-none-any.whl#sha256=696cfcf7f361ec4e0dd269ac3c0b30051c83fb75dd92ee7b8b0813f1b6c71f6c (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,667 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.6.1-py3-none-any.whl#sha256=9eddeab3cb03eb693bd4e1e231ab1076caa820fd6db88ef6c584b309cf87af4b (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,667 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.5-py3-none-any.whl#sha256=010daca223b2f36ea9811ebd48eb1afa57c9a0ac2f3a3f84f9b86603107db381 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,667 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.4-py3-none-any.whl#sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,667 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,668 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,668 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-05-25T13:39:59,668 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,668 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-05-25T13:39:59,668 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2023-05-25T13:39:59,669 Skipping link: not a file: https://pypi.org/simple/funid/ 2023-05-25T13:39:59,687 Given no hashes to check 1 links for project 'funid': discarding no candidates 2023-05-25T13:39:59,704 Collecting funid==0.3.8.1 2023-05-25T13:39:59,706 Created temporary directory: /tmp/pip-unpack-wenp8x96 2023-05-25T13:39:59,827 Downloading FunID-0.3.8.1.tar.gz (51.4 MB) 2023-05-25T13:40:14,947 Added funid==0.3.8.1 from https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz to build tracker '/tmp/pip-build-tracker-30wd9a1i' 2023-05-25T13:40:14,949 Running setup.py (path:/tmp/pip-wheel-9zot3o7g/funid_38ac9660423b472f990a8bf5a5680bc7/setup.py) egg_info for package funid 2023-05-25T13:40:14,950 Created temporary directory: /tmp/pip-pip-egg-info-et9f1pos 2023-05-25T13:40:14,950 Preparing metadata (setup.py): started 2023-05-25T13:40:14,951 Running command python setup.py egg_info 2023-05-25T13:40:15,562 {'name': 'FunID', 'version': '0.3.8.1', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.8', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-05-25T13:40:15,563 running egg_info 2023-05-25T13:40:15,564 creating /tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info 2023-05-25T13:40:15,589 writing /tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/PKG-INFO 2023-05-25T13:40:15,591 writing dependency_links to /tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/dependency_links.txt 2023-05-25T13:40:15,593 writing entry points to /tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/entry_points.txt 2023-05-25T13:40:15,595 writing requirements to /tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/requires.txt 2023-05-25T13:40:15,596 writing top-level names to /tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/top_level.txt 2023-05-25T13:40:15,598 writing manifest file '/tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/SOURCES.txt' 2023-05-25T13:40:15,686 reading manifest file '/tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/SOURCES.txt' 2023-05-25T13:40:15,688 adding license file 'LICENSE' 2023-05-25T13:40:15,691 writing manifest file '/tmp/pip-pip-egg-info-et9f1pos/FunID.egg-info/SOURCES.txt' 2023-05-25T13:40:15,751 Preparing metadata (setup.py): finished with status 'done' 2023-05-25T13:40:15,756 Source in /tmp/pip-wheel-9zot3o7g/funid_38ac9660423b472f990a8bf5a5680bc7 has version 0.3.8.1, which satisfies requirement funid==0.3.8.1 from https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz 2023-05-25T13:40:15,757 Removed funid==0.3.8.1 from https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz from build tracker '/tmp/pip-build-tracker-30wd9a1i' 2023-05-25T13:40:15,764 Created temporary directory: /tmp/pip-unpack-pd_31kz8 2023-05-25T13:40:15,764 Building wheels for collected packages: funid 2023-05-25T13:40:15,769 Created temporary directory: /tmp/pip-wheel-m15kozcq 2023-05-25T13:40:15,769 Building wheel for funid (setup.py): started 2023-05-25T13:40:15,770 Destination directory: /tmp/pip-wheel-m15kozcq 2023-05-25T13:40:15,770 Running command python setup.py bdist_wheel 2023-05-25T13:40:16,196 {'name': 'FunID', 'version': '0.3.8.1', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.8', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-05-25T13:40:16,570 running bdist_wheel 2023-05-25T13:40:16,843 running build 2023-05-25T13:40:16,844 running build_py 2023-05-25T13:40:16,872 creating build 2023-05-25T13:40:16,872 creating build/lib 2023-05-25T13:40:16,873 creating build/lib/funid 2023-05-25T13:40:16,875 copying funid/main.py -> build/lib/funid 2023-05-25T13:40:16,877 copying funid/__init__.py -> build/lib/funid 2023-05-25T13:40:16,879 copying funid/FunID_GUI.py -> build/lib/funid 2023-05-25T13:40:16,883 creating build/lib/funid/src 2023-05-25T13:40:16,884 copying funid/src/tree.py -> build/lib/funid/src 2023-05-25T13:40:16,886 copying funid/src/dataset.py -> build/lib/funid/src 2023-05-25T13:40:16,889 copying funid/src/search.py -> build/lib/funid/src 2023-05-25T13:40:16,891 copying funid/src/initialize.py -> build/lib/funid/src 2023-05-25T13:40:16,894 copying funid/src/hasher.py -> build/lib/funid/src 2023-05-25T13:40:16,896 copying funid/src/ext.py -> build/lib/funid/src 2023-05-25T13:40:16,898 copying funid/src/logger.py -> build/lib/funid/src 2023-05-25T13:40:16,900 copying funid/src/trim.py -> build/lib/funid/src 2023-05-25T13:40:16,902 copying funid/src/tool.py -> build/lib/funid/src 2023-05-25T13:40:16,904 copying funid/src/reporter.py -> build/lib/funid/src 2023-05-25T13:40:16,907 copying funid/src/validate_option.py -> build/lib/funid/src 2023-05-25T13:40:16,911 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2023-05-25T13:40:16,913 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2023-05-25T13:40:16,917 copying funid/src/validation.py -> build/lib/funid/src 2023-05-25T13:40:16,919 copying funid/src/align.py -> build/lib/funid/src 2023-05-25T13:40:16,921 copying funid/src/ncbi.py -> build/lib/funid/src 2023-05-25T13:40:16,923 copying funid/src/save.py -> build/lib/funid/src 2023-05-25T13:40:16,925 copying funid/src/__init__.py -> build/lib/funid/src 2023-05-25T13:40:16,927 copying funid/src/patch.py -> build/lib/funid/src 2023-05-25T13:40:16,929 copying funid/src/manage_input.py -> build/lib/funid/src 2023-05-25T13:40:16,932 copying funid/src/modeltest.py -> build/lib/funid/src 2023-05-25T13:40:16,935 copying funid/src/concatenate.py -> build/lib/funid/src 2023-05-25T13:40:16,937 copying funid/src/opt_generator.py -> build/lib/funid/src 2023-05-25T13:40:16,939 copying funid/src/logics.py -> build/lib/funid/src 2023-05-25T13:40:16,941 copying funid/src/cluster.py -> build/lib/funid/src 2023-05-25T13:40:16,943 copying funid/src/command.py -> build/lib/funid/src 2023-05-25T13:40:16,946 creating build/lib/funid/data 2023-05-25T13:40:16,947 copying funid/data/__init__.py -> build/lib/funid/data 2023-05-25T13:40:16,949 running egg_info 2023-05-25T13:40:17,007 writing FunID.egg-info/PKG-INFO 2023-05-25T13:40:17,009 writing dependency_links to FunID.egg-info/dependency_links.txt 2023-05-25T13:40:17,011 writing entry points to FunID.egg-info/entry_points.txt 2023-05-25T13:40:17,012 writing requirements to FunID.egg-info/requires.txt 2023-05-25T13:40:17,013 writing top-level names to FunID.egg-info/top_level.txt 2023-05-25T13:40:17,050 reading manifest file 'FunID.egg-info/SOURCES.txt' 2023-05-25T13:40:17,059 adding license file 'LICENSE' 2023-05-25T13:40:17,066 writing manifest file 'FunID.egg-info/SOURCES.txt' 2023-05-25T13:40:17,069 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external' is absent from the `packages` configuration. 2023-05-25T13:40:17,070 !! 2023-05-25T13:40:17,070 ******************************************************************************** 2023-05-25T13:40:17,070 ############################ 2023-05-25T13:40:17,070 # Package would be ignored # 2023-05-25T13:40:17,070 ############################ 2023-05-25T13:40:17,070 Python recognizes 'funid.external' as an importable package[^1], 2023-05-25T13:40:17,070 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,071 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,071 package, please make sure that 'funid.external' is explicitly added 2023-05-25T13:40:17,071 to the `packages` configuration field. 2023-05-25T13:40:17,071 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,071 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,071 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,072 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,072 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,072 If you don't want 'funid.external' to be distributed and are 2023-05-25T13:40:17,072 already explicitly excluding 'funid.external' via 2023-05-25T13:40:17,072 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,072 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,072 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,073 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,073 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,073 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,073 even if it does not contain any `.py` files. 2023-05-25T13:40:17,073 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,074 directory, all directories are treated like packages. 2023-05-25T13:40:17,074 ******************************************************************************** 2023-05-25T13:40:17,074 !! 2023-05-25T13:40:17,074 check.warn(importable) 2023-05-25T13:40:17,074 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows' is absent from the `packages` configuration. 2023-05-25T13:40:17,074 !! 2023-05-25T13:40:17,075 ******************************************************************************** 2023-05-25T13:40:17,075 ############################ 2023-05-25T13:40:17,075 # Package would be ignored # 2023-05-25T13:40:17,075 ############################ 2023-05-25T13:40:17,075 Python recognizes 'funid.external.BLAST_Windows' as an importable package[^1], 2023-05-25T13:40:17,075 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,075 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,076 package, please make sure that 'funid.external.BLAST_Windows' is explicitly added 2023-05-25T13:40:17,076 to the `packages` configuration field. 2023-05-25T13:40:17,076 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,076 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,076 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,076 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,077 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,077 If you don't want 'funid.external.BLAST_Windows' to be distributed and are 2023-05-25T13:40:17,077 already explicitly excluding 'funid.external.BLAST_Windows' via 2023-05-25T13:40:17,077 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,077 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,077 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,078 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,078 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,078 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,078 even if it does not contain any `.py` files. 2023-05-25T13:40:17,078 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,078 directory, all directories are treated like packages. 2023-05-25T13:40:17,079 ******************************************************************************** 2023-05-25T13:40:17,079 !! 2023-05-25T13:40:17,079 check.warn(importable) 2023-05-25T13:40:17,079 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.bin' is absent from the `packages` configuration. 2023-05-25T13:40:17,079 !! 2023-05-25T13:40:17,079 ******************************************************************************** 2023-05-25T13:40:17,079 ############################ 2023-05-25T13:40:17,080 # Package would be ignored # 2023-05-25T13:40:17,080 ############################ 2023-05-25T13:40:17,080 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package[^1], 2023-05-25T13:40:17,080 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,080 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,080 package, please make sure that 'funid.external.BLAST_Windows.bin' is explicitly added 2023-05-25T13:40:17,080 to the `packages` configuration field. 2023-05-25T13:40:17,081 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,081 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,081 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,081 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,081 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,081 If you don't want 'funid.external.BLAST_Windows.bin' to be distributed and are 2023-05-25T13:40:17,082 already explicitly excluding 'funid.external.BLAST_Windows.bin' via 2023-05-25T13:40:17,082 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,082 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,082 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,082 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,082 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,083 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,083 even if it does not contain any `.py` files. 2023-05-25T13:40:17,083 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,083 directory, all directories are treated like packages. 2023-05-25T13:40:17,083 ******************************************************************************** 2023-05-25T13:40:17,083 !! 2023-05-25T13:40:17,083 check.warn(importable) 2023-05-25T13:40:17,084 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.doc' is absent from the `packages` configuration. 2023-05-25T13:40:17,084 !! 2023-05-25T13:40:17,084 ******************************************************************************** 2023-05-25T13:40:17,084 ############################ 2023-05-25T13:40:17,084 # Package would be ignored # 2023-05-25T13:40:17,084 ############################ 2023-05-25T13:40:17,084 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package[^1], 2023-05-25T13:40:17,084 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,085 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,085 package, please make sure that 'funid.external.BLAST_Windows.doc' is explicitly added 2023-05-25T13:40:17,085 to the `packages` configuration field. 2023-05-25T13:40:17,085 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,085 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,085 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,086 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,086 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,086 If you don't want 'funid.external.BLAST_Windows.doc' to be distributed and are 2023-05-25T13:40:17,086 already explicitly excluding 'funid.external.BLAST_Windows.doc' via 2023-05-25T13:40:17,086 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,086 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,086 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,087 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,087 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,087 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,087 even if it does not contain any `.py` files. 2023-05-25T13:40:17,087 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,087 directory, all directories are treated like packages. 2023-05-25T13:40:17,088 ******************************************************************************** 2023-05-25T13:40:17,088 !! 2023-05-25T13:40:17,088 check.warn(importable) 2023-05-25T13:40:17,088 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.FastTree_Windows' is absent from the `packages` configuration. 2023-05-25T13:40:17,088 !! 2023-05-25T13:40:17,088 ******************************************************************************** 2023-05-25T13:40:17,089 ############################ 2023-05-25T13:40:17,089 # Package would be ignored # 2023-05-25T13:40:17,089 ############################ 2023-05-25T13:40:17,089 Python recognizes 'funid.external.FastTree_Windows' as an importable package[^1], 2023-05-25T13:40:17,089 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,089 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,089 package, please make sure that 'funid.external.FastTree_Windows' is explicitly added 2023-05-25T13:40:17,089 to the `packages` configuration field. 2023-05-25T13:40:17,090 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,090 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,090 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,090 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,090 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,091 If you don't want 'funid.external.FastTree_Windows' to be distributed and are 2023-05-25T13:40:17,091 already explicitly excluding 'funid.external.FastTree_Windows' via 2023-05-25T13:40:17,091 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,091 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,091 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,091 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,091 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,092 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,092 even if it does not contain any `.py` files. 2023-05-25T13:40:17,092 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,092 directory, all directories are treated like packages. 2023-05-25T13:40:17,092 ******************************************************************************** 2023-05-25T13:40:17,093 !! 2023-05-25T13:40:17,093 check.warn(importable) 2023-05-25T13:40:17,093 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.RAxML_Windows' is absent from the `packages` configuration. 2023-05-25T13:40:17,093 !! 2023-05-25T13:40:17,093 ******************************************************************************** 2023-05-25T13:40:17,093 ############################ 2023-05-25T13:40:17,094 # Package would be ignored # 2023-05-25T13:40:17,094 ############################ 2023-05-25T13:40:17,094 Python recognizes 'funid.external.RAxML_Windows' as an importable package[^1], 2023-05-25T13:40:17,094 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,094 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,095 package, please make sure that 'funid.external.RAxML_Windows' is explicitly added 2023-05-25T13:40:17,095 to the `packages` configuration field. 2023-05-25T13:40:17,095 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,095 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,095 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,096 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,096 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,096 If you don't want 'funid.external.RAxML_Windows' to be distributed and are 2023-05-25T13:40:17,096 already explicitly excluding 'funid.external.RAxML_Windows' via 2023-05-25T13:40:17,096 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,097 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,097 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,097 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,097 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,098 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,098 even if it does not contain any `.py` files. 2023-05-25T13:40:17,098 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,098 directory, all directories are treated like packages. 2023-05-25T13:40:17,098 ******************************************************************************** 2023-05-25T13:40:17,098 !! 2023-05-25T13:40:17,099 check.warn(importable) 2023-05-25T13:40:17,099 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows' is absent from the `packages` configuration. 2023-05-25T13:40:17,099 !! 2023-05-25T13:40:17,099 ******************************************************************************** 2023-05-25T13:40:17,099 ############################ 2023-05-25T13:40:17,099 # Package would be ignored # 2023-05-25T13:40:17,100 ############################ 2023-05-25T13:40:17,100 Python recognizes 'funid.external.mmseqs_Windows' as an importable package[^1], 2023-05-25T13:40:17,100 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,101 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,101 package, please make sure that 'funid.external.mmseqs_Windows' is explicitly added 2023-05-25T13:40:17,101 to the `packages` configuration field. 2023-05-25T13:40:17,101 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,101 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,102 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,102 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,102 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,102 If you don't want 'funid.external.mmseqs_Windows' to be distributed and are 2023-05-25T13:40:17,103 already explicitly excluding 'funid.external.mmseqs_Windows' via 2023-05-25T13:40:17,103 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,103 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,103 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,103 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,103 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,104 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,104 even if it does not contain any `.py` files. 2023-05-25T13:40:17,104 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,104 directory, all directories are treated like packages. 2023-05-25T13:40:17,104 ******************************************************************************** 2023-05-25T13:40:17,104 !! 2023-05-25T13:40:17,105 check.warn(importable) 2023-05-25T13:40:17,105 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.bin' is absent from the `packages` configuration. 2023-05-25T13:40:17,105 !! 2023-05-25T13:40:17,105 ******************************************************************************** 2023-05-25T13:40:17,105 ############################ 2023-05-25T13:40:17,105 # Package would be ignored # 2023-05-25T13:40:17,105 ############################ 2023-05-25T13:40:17,105 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package[^1], 2023-05-25T13:40:17,106 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,106 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,106 package, please make sure that 'funid.external.mmseqs_Windows.bin' is explicitly added 2023-05-25T13:40:17,106 to the `packages` configuration field. 2023-05-25T13:40:17,106 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,106 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,106 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,107 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,107 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,107 If you don't want 'funid.external.mmseqs_Windows.bin' to be distributed and are 2023-05-25T13:40:17,107 already explicitly excluding 'funid.external.mmseqs_Windows.bin' via 2023-05-25T13:40:17,107 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,107 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,108 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,108 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,108 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,108 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,108 even if it does not contain any `.py` files. 2023-05-25T13:40:17,109 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,109 directory, all directories are treated like packages. 2023-05-25T13:40:17,109 ******************************************************************************** 2023-05-25T13:40:17,109 !! 2023-05-25T13:40:17,109 check.warn(importable) 2023-05-25T13:40:17,109 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.examples' is absent from the `packages` configuration. 2023-05-25T13:40:17,109 !! 2023-05-25T13:40:17,110 ******************************************************************************** 2023-05-25T13:40:17,110 ############################ 2023-05-25T13:40:17,110 # Package would be ignored # 2023-05-25T13:40:17,110 ############################ 2023-05-25T13:40:17,110 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package[^1], 2023-05-25T13:40:17,110 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,110 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,111 package, please make sure that 'funid.external.mmseqs_Windows.examples' is explicitly added 2023-05-25T13:40:17,111 to the `packages` configuration field. 2023-05-25T13:40:17,111 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,111 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,111 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,111 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,112 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,112 If you don't want 'funid.external.mmseqs_Windows.examples' to be distributed and are 2023-05-25T13:40:17,112 already explicitly excluding 'funid.external.mmseqs_Windows.examples' via 2023-05-25T13:40:17,112 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,112 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,112 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,112 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,113 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,113 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,113 even if it does not contain any `.py` files. 2023-05-25T13:40:17,113 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,113 directory, all directories are treated like packages. 2023-05-25T13:40:17,113 ******************************************************************************** 2023-05-25T13:40:17,114 !! 2023-05-25T13:40:17,114 check.warn(importable) 2023-05-25T13:40:17,114 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.matrices' is absent from the `packages` configuration. 2023-05-25T13:40:17,114 !! 2023-05-25T13:40:17,114 ******************************************************************************** 2023-05-25T13:40:17,114 ############################ 2023-05-25T13:40:17,114 # Package would be ignored # 2023-05-25T13:40:17,115 ############################ 2023-05-25T13:40:17,115 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package[^1], 2023-05-25T13:40:17,115 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,115 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,115 package, please make sure that 'funid.external.mmseqs_Windows.matrices' is explicitly added 2023-05-25T13:40:17,115 to the `packages` configuration field. 2023-05-25T13:40:17,115 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,116 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,116 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,116 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,116 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,116 If you don't want 'funid.external.mmseqs_Windows.matrices' to be distributed and are 2023-05-25T13:40:17,117 already explicitly excluding 'funid.external.mmseqs_Windows.matrices' via 2023-05-25T13:40:17,117 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,117 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,117 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,117 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,117 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,118 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,118 even if it does not contain any `.py` files. 2023-05-25T13:40:17,118 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,118 directory, all directories are treated like packages. 2023-05-25T13:40:17,118 ******************************************************************************** 2023-05-25T13:40:17,118 !! 2023-05-25T13:40:17,118 check.warn(importable) 2023-05-25T13:40:17,119 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.util' is absent from the `packages` configuration. 2023-05-25T13:40:17,119 !! 2023-05-25T13:40:17,119 ******************************************************************************** 2023-05-25T13:40:17,119 ############################ 2023-05-25T13:40:17,119 # Package would be ignored # 2023-05-25T13:40:17,119 ############################ 2023-05-25T13:40:17,119 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package[^1], 2023-05-25T13:40:17,119 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,120 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,120 package, please make sure that 'funid.external.mmseqs_Windows.util' is explicitly added 2023-05-25T13:40:17,120 to the `packages` configuration field. 2023-05-25T13:40:17,120 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,120 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,120 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,121 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,121 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,121 If you don't want 'funid.external.mmseqs_Windows.util' to be distributed and are 2023-05-25T13:40:17,121 already explicitly excluding 'funid.external.mmseqs_Windows.util' via 2023-05-25T13:40:17,121 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,121 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,121 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,122 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,122 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,122 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,122 even if it does not contain any `.py` files. 2023-05-25T13:40:17,122 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,123 directory, all directories are treated like packages. 2023-05-25T13:40:17,123 ******************************************************************************** 2023-05-25T13:40:17,123 !! 2023-05-25T13:40:17,123 check.warn(importable) 2023-05-25T13:40:17,123 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium' is absent from the `packages` configuration. 2023-05-25T13:40:17,123 !! 2023-05-25T13:40:17,123 ******************************************************************************** 2023-05-25T13:40:17,124 ############################ 2023-05-25T13:40:17,124 # Package would be ignored # 2023-05-25T13:40:17,124 ############################ 2023-05-25T13:40:17,124 Python recognizes 'funid.test_dataset.penicillium' as an importable package[^1], 2023-05-25T13:40:17,124 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,124 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,124 package, please make sure that 'funid.test_dataset.penicillium' is explicitly added 2023-05-25T13:40:17,124 to the `packages` configuration field. 2023-05-25T13:40:17,125 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,125 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,125 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,125 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,125 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,126 If you don't want 'funid.test_dataset.penicillium' to be distributed and are 2023-05-25T13:40:17,126 already explicitly excluding 'funid.test_dataset.penicillium' via 2023-05-25T13:40:17,126 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,126 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,126 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,126 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,126 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,127 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,127 even if it does not contain any `.py` files. 2023-05-25T13:40:17,127 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,127 directory, all directories are treated like packages. 2023-05-25T13:40:17,127 ******************************************************************************** 2023-05-25T13:40:17,127 !! 2023-05-25T13:40:17,128 check.warn(importable) 2023-05-25T13:40:17,128 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.DB' is absent from the `packages` configuration. 2023-05-25T13:40:17,128 !! 2023-05-25T13:40:17,128 ******************************************************************************** 2023-05-25T13:40:17,128 ############################ 2023-05-25T13:40:17,128 # Package would be ignored # 2023-05-25T13:40:17,128 ############################ 2023-05-25T13:40:17,128 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package[^1], 2023-05-25T13:40:17,129 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,129 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,129 package, please make sure that 'funid.test_dataset.penicillium.DB' is explicitly added 2023-05-25T13:40:17,129 to the `packages` configuration field. 2023-05-25T13:40:17,129 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,129 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,130 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,130 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,130 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,130 If you don't want 'funid.test_dataset.penicillium.DB' to be distributed and are 2023-05-25T13:40:17,130 already explicitly excluding 'funid.test_dataset.penicillium.DB' via 2023-05-25T13:40:17,130 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,131 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,131 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,131 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,131 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,131 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,132 even if it does not contain any `.py` files. 2023-05-25T13:40:17,132 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,132 directory, all directories are treated like packages. 2023-05-25T13:40:17,132 ******************************************************************************** 2023-05-25T13:40:17,132 !! 2023-05-25T13:40:17,132 check.warn(importable) 2023-05-25T13:40:17,132 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.Query' is absent from the `packages` configuration. 2023-05-25T13:40:17,132 !! 2023-05-25T13:40:17,133 ******************************************************************************** 2023-05-25T13:40:17,133 ############################ 2023-05-25T13:40:17,133 # Package would be ignored # 2023-05-25T13:40:17,133 ############################ 2023-05-25T13:40:17,133 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package[^1], 2023-05-25T13:40:17,133 but it is absent from setuptools' `packages` configuration. 2023-05-25T13:40:17,133 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T13:40:17,134 package, please make sure that 'funid.test_dataset.penicillium.Query' is explicitly added 2023-05-25T13:40:17,134 to the `packages` configuration field. 2023-05-25T13:40:17,134 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T13:40:17,134 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T13:40:17,134 instead of `find_packages(...)`/`find:`). 2023-05-25T13:40:17,134 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T13:40:17,135 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T13:40:17,135 If you don't want 'funid.test_dataset.penicillium.Query' to be distributed and are 2023-05-25T13:40:17,135 already explicitly excluding 'funid.test_dataset.penicillium.Query' via 2023-05-25T13:40:17,135 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T13:40:17,135 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T13:40:17,135 combination with a more fine grained `package-data` configuration. 2023-05-25T13:40:17,135 You can read more about "package data files" on setuptools documentation page: 2023-05-25T13:40:17,136 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T13:40:17,136 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T13:40:17,136 even if it does not contain any `.py` files. 2023-05-25T13:40:17,136 On the other hand, currently there is no concept of package data 2023-05-25T13:40:17,136 directory, all directories are treated like packages. 2023-05-25T13:40:17,136 ******************************************************************************** 2023-05-25T13:40:17,137 !! 2023-05-25T13:40:17,137 check.warn(importable) 2023-05-25T13:40:17,137 creating build/lib/funid/external 2023-05-25T13:40:17,137 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2023-05-25T13:40:17,137 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2023-05-25T13:40:17,497 copying funid/external/__init__.py -> build/lib/funid/external 2023-05-25T13:40:17,498 creating build/lib/funid/external/BLAST_Windows 2023-05-25T13:40:17,499 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2023-05-25T13:40:17,503 creating build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:17,504 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:17,801 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:17,803 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:17,805 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:17,809 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:18,064 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:18,069 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-05-25T13:40:18,072 creating build/lib/funid/external/BLAST_Windows/doc 2023-05-25T13:40:18,073 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2023-05-25T13:40:18,076 creating build/lib/funid/external/FastTree_Windows 2023-05-25T13:40:18,077 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2023-05-25T13:40:18,085 creating build/lib/funid/external/Gblocks_Windows_0.91b 2023-05-25T13:40:18,086 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:18,087 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:18,097 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:18,099 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:18,101 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-05-25T13:40:18,102 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-05-25T13:40:18,106 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:18,107 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:18,109 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:18,112 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:18,114 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:18,117 creating build/lib/funid/external/RAxML_Windows 2023-05-25T13:40:18,118 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2023-05-25T13:40:18,121 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2023-05-25T13:40:18,123 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-05-25T13:40:18,166 creating build/lib/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:18,167 copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:18,205 copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:18,207 copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:18,210 copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:18,214 creating build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-05-25T13:40:18,215 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-05-25T13:40:18,358 copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-05-25T13:40:18,377 creating build/lib/funid/external/mmseqs_Windows 2023-05-25T13:40:18,378 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2023-05-25T13:40:18,381 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2023-05-25T13:40:18,384 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2023-05-25T13:40:18,386 creating build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,387 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,405 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,410 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,414 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,422 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,475 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,542 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,546 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:18,723 creating build/lib/funid/external/mmseqs_Windows/examples 2023-05-25T13:40:18,724 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-05-25T13:40:18,731 creating build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,732 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,734 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,736 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,739 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,741 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,743 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,745 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,747 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,749 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,752 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,754 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,756 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,758 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,760 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,762 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,764 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,766 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,769 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,771 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,773 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,775 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,777 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,780 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,782 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,784 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,787 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,789 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,791 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,793 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,796 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,798 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,800 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,802 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,805 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,807 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,809 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,811 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,813 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,816 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,818 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,820 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,822 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:18,824 creating build/lib/funid/external/mmseqs_Windows/util 2023-05-25T13:40:18,825 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2023-05-25T13:40:18,828 creating build/lib/funid/external/trimal.v1.2rev59 2023-05-25T13:40:18,828 creating build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:18,829 copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:18,832 copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:18,834 copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:18,837 copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:18,839 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-05-25T13:40:18,840 copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-05-25T13:40:18,852 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,853 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,857 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,860 copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,863 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,866 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,868 copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,872 copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,874 copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,877 copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,880 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,883 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,885 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,888 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,890 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,893 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,895 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,898 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,900 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,903 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,905 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,908 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,910 copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:18,912 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2023-05-25T13:40:18,915 copying funid/data/genus_line.txt -> build/lib/funid/data 2023-05-25T13:40:18,918 creating build/lib/funid/test_dataset 2023-05-25T13:40:18,919 creating build/lib/funid/test_dataset/penicillium 2023-05-25T13:40:18,920 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2023-05-25T13:40:18,922 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2023-05-25T13:40:18,924 creating build/lib/funid/test_dataset/penicillium/DB 2023-05-25T13:40:18,925 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2023-05-25T13:40:18,932 creating build/lib/funid/test_dataset/penicillium/Query 2023-05-25T13:40:18,933 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2023-05-25T13:40:18,939 creating build/lib/funid/preset 2023-05-25T13:40:18,940 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2023-05-25T13:40:18,942 copying funid/preset/fast.yaml -> build/lib/funid/preset 2023-05-25T13:40:18,975 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-25T13:40:18,975 !! 2023-05-25T13:40:18,976 ******************************************************************************** 2023-05-25T13:40:18,976 Please avoid running ``setup.py`` directly. 2023-05-25T13:40:18,976 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-25T13:40:18,976 other standards-based tools. 2023-05-25T13:40:18,976 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-25T13:40:18,976 ******************************************************************************** 2023-05-25T13:40:18,977 !! 2023-05-25T13:40:18,977 self.initialize_options() 2023-05-25T13:40:19,001 installing to build/bdist.linux-armv7l/wheel 2023-05-25T13:40:19,001 running install 2023-05-25T13:40:19,027 running install_lib 2023-05-25T13:40:19,054 creating build/bdist.linux-armv7l 2023-05-25T13:40:19,054 creating build/bdist.linux-armv7l/wheel 2023-05-25T13:40:19,056 creating build/bdist.linux-armv7l/wheel/funid 2023-05-25T13:40:19,058 creating build/bdist.linux-armv7l/wheel/funid/external 2023-05-25T13:40:19,059 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2023-05-25T13:40:19,473 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2023-05-25T13:40:19,476 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-05-25T13:40:19,477 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-05-25T13:40:19,478 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-05-25T13:40:19,485 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-05-25T13:40:19,487 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-05-25T13:40:19,488 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-05-25T13:40:19,491 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,492 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,494 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,496 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,497 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,500 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,502 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,503 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,505 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,507 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,509 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,511 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,512 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,514 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,516 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,517 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,519 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,521 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,523 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,524 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,526 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,527 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,529 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,531 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,532 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,534 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,536 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,538 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,539 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,541 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,543 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,544 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,546 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,548 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,549 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,551 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,553 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,555 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,556 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,558 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,560 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,561 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,563 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-05-25T13:40:19,564 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-05-25T13:40:19,568 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-05-25T13:40:19,570 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,571 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,575 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,639 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,670 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,676 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,687 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,690 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,885 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-05-25T13:40:19,889 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59 2023-05-25T13:40:19,890 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:19,891 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:19,894 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,895 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,897 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,899 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,901 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,904 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,908 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,910 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,912 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,915 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,918 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,920 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,923 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,925 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,927 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,930 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,933 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,935 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,937 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,939 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,941 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,943 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,945 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-05-25T13:40:19,947 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:19,949 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:19,951 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-05-25T13:40:19,955 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-05-25T13:40:19,956 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-05-25T13:40:19,971 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-05-25T13:40:19,972 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-05-25T13:40:19,982 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-05-25T13:40:19,983 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-05-25T13:40:20,011 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-05-25T13:40:20,013 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-05-25T13:40:20,015 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2023-05-25T13:40:20,017 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-05-25T13:40:20,018 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-05-25T13:40:20,022 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,022 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,200 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,205 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,208 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,210 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,212 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,214 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-05-25T13:40:20,466 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-05-25T13:40:20,467 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-05-25T13:40:20,469 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2023-05-25T13:40:20,471 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:20,473 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:20,474 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:20,476 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:20,479 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:20,481 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-05-25T13:40:20,484 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-05-25T13:40:20,485 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-05-25T13:40:20,489 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:20,491 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:20,497 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-05-25T13:40:20,499 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:20,500 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:20,501 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:20,543 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-05-25T13:40:20,544 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-05-25T13:40:20,703 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-05-25T13:40:20,723 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:20,725 copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-05-25T13:40:20,730 creating build/bdist.linux-armv7l/wheel/funid/data 2023-05-25T13:40:20,731 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2023-05-25T13:40:20,732 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2023-05-25T13:40:20,734 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2023-05-25T13:40:20,738 creating build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,739 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,741 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,743 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,745 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,748 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,750 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,752 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,754 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,755 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,758 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,761 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,764 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,766 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,769 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,771 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,773 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,775 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,777 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,779 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,781 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,784 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,786 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,788 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,790 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,792 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,795 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-05-25T13:40:20,797 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2023-05-25T13:40:20,799 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2023-05-25T13:40:20,801 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2023-05-25T13:40:20,804 creating build/bdist.linux-armv7l/wheel/funid/preset 2023-05-25T13:40:20,805 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-05-25T13:40:20,806 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-05-25T13:40:20,809 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2023-05-25T13:40:20,810 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-05-25T13:40:20,811 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-05-25T13:40:20,813 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-05-25T13:40:20,814 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-05-25T13:40:20,824 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-05-25T13:40:20,826 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-05-25T13:40:20,827 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-05-25T13:40:20,833 running install_egg_info 2023-05-25T13:40:20,863 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.8.1-py3.9.egg-info 2023-05-25T13:40:20,876 running install_scripts 2023-05-25T13:40:20,898 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-05-25T13:40:20,904 creating build/bdist.linux-armv7l/wheel/FunID-0.3.8.1.dist-info/WHEEL 2023-05-25T13:40:20,906 creating '/tmp/pip-wheel-m15kozcq/FunID-0.3.8.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-25T13:40:20,911 adding 'funid/FunID_GUI.py' 2023-05-25T13:40:20,912 adding 'funid/__init__.py' 2023-05-25T13:40:20,914 adding 'funid/main.py' 2023-05-25T13:40:20,918 adding 'funid/data/Option_manager.xlsx' 2023-05-25T13:40:20,920 adding 'funid/data/__init__.py' 2023-05-25T13:40:20,927 adding 'funid/data/genus_line.txt' 2023-05-25T13:40:20,934 adding 'funid/external/MAFFT_LICENSE' 2023-05-25T13:40:24,002 adding 'funid/external/MAFFT_Windows.zip' 2023-05-25T13:40:24,170 adding 'funid/external/__init__.py' 2023-05-25T13:40:24,179 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2023-05-25T13:40:27,151 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2023-05-25T13:40:27,257 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2023-05-25T13:40:27,259 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2023-05-25T13:40:27,263 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2023-05-25T13:40:29,326 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2023-05-25T13:40:29,425 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2023-05-25T13:40:29,429 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2023-05-25T13:40:29,431 adding 'funid/external/BLAST_Windows/doc/README.txt' 2023-05-25T13:40:29,488 adding 'funid/external/FastTree_Windows/FastTree.exe' 2023-05-25T13:40:29,529 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2023-05-25T13:40:29,532 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2023-05-25T13:40:29,533 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2023-05-25T13:40:29,539 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2023-05-25T13:40:29,542 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2023-05-25T13:40:29,543 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2023-05-25T13:40:29,545 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2023-05-25T13:40:29,548 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2023-05-25T13:40:29,555 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2023-05-25T13:40:29,556 adding 'funid/external/RAxML_Windows/README' 2023-05-25T13:40:29,850 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2023-05-25T13:40:29,943 adding 'funid/external/iqtree-2.1.3-Windows/example.cf' 2023-05-25T13:40:29,958 adding 'funid/external/iqtree-2.1.3-Windows/example.nex' 2023-05-25T13:40:29,970 adding 'funid/external/iqtree-2.1.3-Windows/example.phy' 2023-05-25T13:40:30,001 adding 'funid/external/iqtree-2.1.3-Windows/models.nex' 2023-05-25T13:40:31,726 adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe' 2023-05-25T13:40:31,976 adding 'funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll' 2023-05-25T13:40:31,990 adding 'funid/external/mmseqs_Windows/LICENSE.md' 2023-05-25T13:40:31,993 adding 'funid/external/mmseqs_Windows/README.md' 2023-05-25T13:40:31,994 adding 'funid/external/mmseqs_Windows/mmseqs.bat' 2023-05-25T13:40:32,128 adding 'funid/external/mmseqs_Windows/bin/busybox.exe' 2023-05-25T13:40:32,142 adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll' 2023-05-25T13:40:32,156 adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2023-05-25T13:40:32,199 adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll' 2023-05-25T13:40:32,462 adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2023-05-25T13:40:33,063 adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll' 2023-05-25T13:40:33,101 adding 'funid/external/mmseqs_Windows/bin/cygz.dll' 2023-05-25T13:40:36,398 adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe' 2023-05-25T13:40:36,521 adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta' 2023-05-25T13:40:36,526 adding 'funid/external/mmseqs_Windows/matrices/PAM10.out' 2023-05-25T13:40:36,527 adding 'funid/external/mmseqs_Windows/matrices/PAM100.out' 2023-05-25T13:40:36,529 adding 'funid/external/mmseqs_Windows/matrices/PAM110.out' 2023-05-25T13:40:36,530 adding 'funid/external/mmseqs_Windows/matrices/PAM120.out' 2023-05-25T13:40:36,531 adding 'funid/external/mmseqs_Windows/matrices/PAM130.out' 2023-05-25T13:40:36,533 adding 'funid/external/mmseqs_Windows/matrices/PAM140.out' 2023-05-25T13:40:36,534 adding 'funid/external/mmseqs_Windows/matrices/PAM150.out' 2023-05-25T13:40:36,535 adding 'funid/external/mmseqs_Windows/matrices/PAM160.out' 2023-05-25T13:40:36,537 adding 'funid/external/mmseqs_Windows/matrices/PAM170.out' 2023-05-25T13:40:36,538 adding 'funid/external/mmseqs_Windows/matrices/PAM180.out' 2023-05-25T13:40:36,539 adding 'funid/external/mmseqs_Windows/matrices/PAM190.out' 2023-05-25T13:40:36,541 adding 'funid/external/mmseqs_Windows/matrices/PAM20.out' 2023-05-25T13:40:36,542 adding 'funid/external/mmseqs_Windows/matrices/PAM30.out' 2023-05-25T13:40:36,544 adding 'funid/external/mmseqs_Windows/matrices/PAM40.out' 2023-05-25T13:40:36,545 adding 'funid/external/mmseqs_Windows/matrices/PAM50.out' 2023-05-25T13:40:36,546 adding 'funid/external/mmseqs_Windows/matrices/PAM60.out' 2023-05-25T13:40:36,548 adding 'funid/external/mmseqs_Windows/matrices/PAM70.out' 2023-05-25T13:40:36,549 adding 'funid/external/mmseqs_Windows/matrices/PAM80.out' 2023-05-25T13:40:36,550 adding 'funid/external/mmseqs_Windows/matrices/PAM90.out' 2023-05-25T13:40:36,552 adding 'funid/external/mmseqs_Windows/matrices/VTML10.out' 2023-05-25T13:40:36,553 adding 'funid/external/mmseqs_Windows/matrices/VTML120.out' 2023-05-25T13:40:36,555 adding 'funid/external/mmseqs_Windows/matrices/VTML160.out' 2023-05-25T13:40:36,556 adding 'funid/external/mmseqs_Windows/matrices/VTML20.out' 2023-05-25T13:40:36,558 adding 'funid/external/mmseqs_Windows/matrices/VTML40.out' 2023-05-25T13:40:36,559 adding 'funid/external/mmseqs_Windows/matrices/VTML80.out' 2023-05-25T13:40:36,561 adding 'funid/external/mmseqs_Windows/matrices/blosum100.out' 2023-05-25T13:40:36,562 adding 'funid/external/mmseqs_Windows/matrices/blosum30.out' 2023-05-25T13:40:36,564 adding 'funid/external/mmseqs_Windows/matrices/blosum35.out' 2023-05-25T13:40:36,565 adding 'funid/external/mmseqs_Windows/matrices/blosum40.out' 2023-05-25T13:40:36,567 adding 'funid/external/mmseqs_Windows/matrices/blosum45.out' 2023-05-25T13:40:36,569 adding 'funid/external/mmseqs_Windows/matrices/blosum50.out' 2023-05-25T13:40:36,570 adding 'funid/external/mmseqs_Windows/matrices/blosum55.out' 2023-05-25T13:40:36,572 adding 'funid/external/mmseqs_Windows/matrices/blosum60.out' 2023-05-25T13:40:36,573 adding 'funid/external/mmseqs_Windows/matrices/blosum62.out' 2023-05-25T13:40:36,575 adding 'funid/external/mmseqs_Windows/matrices/blosum65.out' 2023-05-25T13:40:36,576 adding 'funid/external/mmseqs_Windows/matrices/blosum70.out' 2023-05-25T13:40:36,578 adding 'funid/external/mmseqs_Windows/matrices/blosum75.out' 2023-05-25T13:40:36,579 adding 'funid/external/mmseqs_Windows/matrices/blosum80.out' 2023-05-25T13:40:36,581 adding 'funid/external/mmseqs_Windows/matrices/blosum85.out' 2023-05-25T13:40:36,583 adding 'funid/external/mmseqs_Windows/matrices/blosum90.out' 2023-05-25T13:40:36,584 adding 'funid/external/mmseqs_Windows/matrices/blosum95.out' 2023-05-25T13:40:36,585 adding 'funid/external/mmseqs_Windows/matrices/nucleotide.out' 2023-05-25T13:40:36,587 adding 'funid/external/mmseqs_Windows/util/bash-completion.sh' 2023-05-25T13:40:36,589 adding 'funid/external/trimal.v1.2rev59/trimAl/AUTHORS' 2023-05-25T13:40:36,591 adding 'funid/external/trimal.v1.2rev59/trimAl/CHANGELOG' 2023-05-25T13:40:36,597 adding 'funid/external/trimal.v1.2rev59/trimAl/LICENSE' 2023-05-25T13:40:36,598 adding 'funid/external/trimal.v1.2rev59/trimAl/README' 2023-05-25T13:40:36,690 adding 'funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe' 2023-05-25T13:40:36,701 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp' 2023-05-25T13:40:36,704 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.h' 2023-05-25T13:40:36,705 adding 'funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp' 2023-05-25T13:40:36,707 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp' 2023-05-25T13:40:36,709 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h' 2023-05-25T13:40:36,714 adding 'funid/external/trimal.v1.2rev59/trimAl/source/main.cpp' 2023-05-25T13:40:36,715 adding 'funid/external/trimal.v1.2rev59/trimAl/source/makefile' 2023-05-25T13:40:36,717 adding 'funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp' 2023-05-25T13:40:36,723 adding 'funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp' 2023-05-25T13:40:36,725 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp' 2023-05-25T13:40:36,726 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h' 2023-05-25T13:40:36,729 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp' 2023-05-25T13:40:36,730 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h' 2023-05-25T13:40:36,732 adding 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2023-05-25T13:40:36,878 adding 'FunID-0.3.8.1.dist-info/top_level.txt' 2023-05-25T13:40:36,881 adding 'FunID-0.3.8.1.dist-info/RECORD' 2023-05-25T13:40:37,429 removing build/bdist.linux-armv7l/wheel 2023-05-25T13:40:37,594 Building wheel for funid (setup.py): finished with status 'done' 2023-05-25T13:40:38,103 Created wheel for funid: filename=FunID-0.3.8.1-py3-none-any.whl size=51619262 sha256=e084fdf424ae421530d153e56c4a7a15849d59762617b101ba672265e1f83ae2 2023-05-25T13:40:38,104 Stored in directory: /tmp/pip-ephem-wheel-cache-1ikatieo/wheels/88/63/49/1c6f7870fe98ce7106ee83dbe61c7db4069c685091d0a0fce4 2023-05-25T13:40:38,136 Successfully built funid 2023-05-25T13:40:39,347 Removed build tracker: '/tmp/pip-build-tracker-30wd9a1i'