2023-05-25T21:56:29,706 Created temporary directory: /tmp/pip-build-tracker-af8lsu6e 2023-05-25T21:56:29,708 Initialized build tracking at /tmp/pip-build-tracker-af8lsu6e 2023-05-25T21:56:29,709 Created build tracker: /tmp/pip-build-tracker-af8lsu6e 2023-05-25T21:56:29,709 Entered build tracker: /tmp/pip-build-tracker-af8lsu6e 2023-05-25T21:56:29,710 Created temporary directory: /tmp/pip-wheel-ailuqtxu 2023-05-25T21:56:29,719 Created temporary directory: /tmp/pip-ephem-wheel-cache-_7awpicx 2023-05-25T21:56:29,775 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-25T21:56:29,783 2 location(s) to search for versions of dnacauldron: 2023-05-25T21:56:29,783 * https://pypi.org/simple/dnacauldron/ 2023-05-25T21:56:29,783 * https://www.piwheels.org/simple/dnacauldron/ 2023-05-25T21:56:29,784 Fetching project page and analyzing links: https://pypi.org/simple/dnacauldron/ 2023-05-25T21:56:29,785 Getting page https://pypi.org/simple/dnacauldron/ 2023-05-25T21:56:29,789 Found index url https://pypi.org/simple/ 2023-05-25T21:56:29,977 Fetched page https://pypi.org/simple/dnacauldron/ as application/vnd.pypi.simple.v1+json 2023-05-25T21:56:29,994 Found link https://files.pythonhosted.org/packages/70/81/efb75a2fd9180ec9c6fc4798ddb2120b4c19a9ee1b2dc57f67b24436f6c0/dnacauldron-0.1.0.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.0 2023-05-25T21:56:29,995 Found link https://files.pythonhosted.org/packages/36/7d/ffa4a2968d5cdd104c2557f1ef7b69dea16527aad970e6f4581d17d45fa4/dnacauldron-0.1.1.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.1 2023-05-25T21:56:29,995 Found link https://files.pythonhosted.org/packages/a5/fc/8541863ce69a0f5401c9770f4053de1551de9567051018207a73e31fe39d/dnacauldron-0.1.2.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.2 2023-05-25T21:56:29,996 Found link https://files.pythonhosted.org/packages/08/76/51fe6d4244834471c40ef1ef9182120ba5999bd2d0dbf11cdd316cf3d059/dnacauldron-0.1.3.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.3 2023-05-25T21:56:29,997 Found link https://files.pythonhosted.org/packages/cd/b1/85b1f3a9d42a63daa3efc20dc8b8a0f124d91320208824845d6329f9af6f/dnacauldron-0.1.4.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.4 2023-05-25T21:56:29,997 Found link https://files.pythonhosted.org/packages/bc/bb/ee372da320440c0dcb433af9c66804fb1b87ce97000e71693ac19e43feb8/dnacauldron-0.1.5.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.5 2023-05-25T21:56:29,998 Found link https://files.pythonhosted.org/packages/64/72/1e55427314288466e7034d40d9ad788d8a635b2cc78eaf5085ce552612f0/dnacauldron-0.1.6.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.6 2023-05-25T21:56:29,999 Found link https://files.pythonhosted.org/packages/4f/6c/7f6c1da4cdb969819854fdcbc99a85a4851c1b87f2014628c1595408c7e2/dnacauldron-0.1.7.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.7 2023-05-25T21:56:30,000 Found link https://files.pythonhosted.org/packages/4d/39/5a02976562ff6f6a1c83596b1c7aea2fcd6d36564e81fee7558cc38e3d10/dnacauldron-0.1.8.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.8 2023-05-25T21:56:30,000 Found link https://files.pythonhosted.org/packages/49/76/784d5d8548f6f4fd0b0bbc938f714440fc094d39feab616f64639f89c99f/dnacauldron-0.1.9.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.9 2023-05-25T21:56:30,001 Found link https://files.pythonhosted.org/packages/2d/01/bb2393997ca8692871b0517c1608fbb8907c7ea4cf20b1a77e54eaddc54a/dnacauldron-0.1.10.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.10 2023-05-25T21:56:30,002 Found link https://files.pythonhosted.org/packages/b1/9e/7902531d008c7528886272eb59fb2d51b81285921c41795f0474bd095847/dnacauldron-0.1.11.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 0.1.11 2023-05-25T21:56:30,002 Found link https://files.pythonhosted.org/packages/a1/b8/0c5c670967ca730ad833a9be3ea8a75fa710aa83876a10b98a94b3e0b44e/dnacauldron-1.0.1.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 1.0.1 2023-05-25T21:56:30,003 Found link https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 1.1.0 2023-05-25T21:56:30,004 Found link https://files.pythonhosted.org/packages/4f/9f/97eb1ba097ce5648b4fbf2db937734e85241805b590246f3985d58fa53da/dnacauldron-1.1.1.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 1.1.1 2023-05-25T21:56:30,004 Found link https://files.pythonhosted.org/packages/ce/c7/59483a3995fb96a44fca7f67b6fec7080a4d53496af693ef13142bf50f47/dnacauldron-1.1.2.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 1.1.2 2023-05-25T21:56:30,005 Found link https://files.pythonhosted.org/packages/b6/d7/9844c428aa24261a1d1c275c67d26aa0dec09c2867cb8b056454bb008695/dnacauldron-2.0.0.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.0 2023-05-25T21:56:30,006 Found link https://files.pythonhosted.org/packages/23/0b/ac1bfda9d3c09eac11285c940a6524db1b1581d0c04ede826f1e5b080a71/dnacauldron-2.0.1.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.1 2023-05-25T21:56:30,006 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/a6/04/8c61138a04d1aac7984344f9623e795f65eb7ec98388236aa75ee83bf7ef/dnacauldron-2.0.2-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,007 Found link https://files.pythonhosted.org/packages/c0/0c/099cfa7ee1993971292d598693ac131b080c62246a99efe353e385989c95/dnacauldron-2.0.2.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.2 2023-05-25T21:56:30,008 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/72/1c/8deb9d187b12e4e91682f0b8b3670f7559f82fa8b85851d3493b51840476/dnacauldron-2.0.3-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,008 Found link https://files.pythonhosted.org/packages/c7/32/c7f8d26237209200e30620c0ec525449bdb0d817ec1386acffa2bddfbe25/dnacauldron-2.0.3.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.3 2023-05-25T21:56:30,009 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/c8/9a/d9287b4906caa54a04f7b3978880c0a01044c6845ce290c358d6090c00c3/dnacauldron-2.0.4-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,010 Found link https://files.pythonhosted.org/packages/57/69/15e5081ac244c492f2b530557f92f64d9cc6b0ac1a963001bb98498532fc/dnacauldron-2.0.4.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.4 2023-05-25T21:56:30,010 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/2f/e3/d78a128e42d618b2b449a240b5746c5ed6e02485f09a534d1cd843ccfd19/dnacauldron-2.0.5-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,011 Found link https://files.pythonhosted.org/packages/49/81/cc2b06a0afbe101ac56980a0c9e232313763c4055682964f8bfbe57f095c/dnacauldron-2.0.5.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.5 2023-05-25T21:56:30,011 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/d0/30/719a4a57098a92a522cac4fc7007d7333e7b1b39de96e3466f0e1d911790/dnacauldron-2.0.6-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,012 Found link https://files.pythonhosted.org/packages/aa/8e/83d0ea3da09b1f62a38ded4d64177bb2e19e64318af361979dc9fbdd1f38/dnacauldron-2.0.6.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.6 2023-05-25T21:56:30,013 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/9b/49/da67887f69c29f175afc831244d350643f6a488816f9e858a377461f1426/dnacauldron-2.0.7-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,013 Found link https://files.pythonhosted.org/packages/b2/a1/20da92b334aee70fd9bf14c1056c616d7f36a028012f003e0499f09ab6b1/dnacauldron-2.0.7.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.7 2023-05-25T21:56:30,014 Skipping link: No binaries permitted for dnacauldron: https://files.pythonhosted.org/packages/cb/8b/615f11821710ed192bf83151d83e5f3800e3240d64d20fdfee4cfa5df7cb/dnacauldron-2.0.8-py3-none-any.whl (from https://pypi.org/simple/dnacauldron/) 2023-05-25T21:56:30,014 Found link https://files.pythonhosted.org/packages/e5/30/3f5d9071f26e62384fb1b5f4205e5fb07cf539076d95734bfc705ab3e612/dnacauldron-2.0.8.tar.gz (from https://pypi.org/simple/dnacauldron/), version: 2.0.8 2023-05-25T21:56:30,015 Fetching project page and analyzing links: https://www.piwheels.org/simple/dnacauldron/ 2023-05-25T21:56:30,016 Getting page https://www.piwheels.org/simple/dnacauldron/ 2023-05-25T21:56:30,019 Found index url https://www.piwheels.org/simple/ 2023-05-25T21:56:30,240 Fetched page https://www.piwheels.org/simple/dnacauldron/ as text/html 2023-05-25T21:56:30,257 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.7-py3-none-any.whl#sha256=221f562d5da44ec0154a1cec9d40277b7915e901b3ee60c0faf87b69d6c20779 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,258 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.6-py3-none-any.whl#sha256=9d21a1d26b1bc22ec0841b556e1b96b15d42849ccedf7101ec29c99e2de0eb17 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,258 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.5-py3-none-any.whl#sha256=a5192a92f8686cea4570d31a900e451c6fe436cce23fae7b552b2f49bab93fe1 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,259 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.4-py3-none-any.whl#sha256=6d0b8080268c4e0159fd0757e1c4dc355b8bd496ce3887a85ab2bc8f15be861a (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,259 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.3-py3-none-any.whl#sha256=3332f2e025aaae141675b74fb0a87733676bdc7f051aab149d925d671fcc544c (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,260 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.2-py3-none-any.whl#sha256=a0be01d76c148a1498881ba56b83363f1b5fae7767e230d43f05649c7fcfc516 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,260 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.1-py3-none-any.whl#sha256=49cffd8c2f7798ce04e4117b5ea70213aa4ebee67183b4abe14a80c0aa73019d (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,261 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-2.0.0-py3-none-any.whl#sha256=154df1edbc38991aefa0e0abf41ef70cb50fc19aeb6eca802364e5dc65810dec (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,261 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-1.1.2-py3-none-any.whl#sha256=3a41c6cea82ecbf4ea43fa1ef0dd37019d3aab181ed89a725811664d91662e9e (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,262 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-1.1.1-py3-none-any.whl#sha256=0fb45d2cd5deb7cdc6d8bc32ebec384369901cbb1b05a08a0507d109f9384b9a (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,262 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-1.1.0-py3-none-any.whl#sha256=6a81016a4355e03e0a3bb16de7fb01398ec9e12914cd7133939cfd00da308802 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,263 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-1.0.1-py3-none-any.whl#sha256=b1bcc4e83471c27839d77f6456bb24d19cea6c72c5ab964b438a0c1083e817e1 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,263 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.11-py3-none-any.whl#sha256=e6783c248bfe22977276995d114d0956778c0c69dc79c6ed070bb29281e90e9d (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,264 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.10-py3-none-any.whl#sha256=6ef04bf68fad59a1975a8b8cd9871797238e36030ed77f1a429fd160185ed1d8 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,265 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.9-py3-none-any.whl#sha256=3a45fa299b396b4144b204aad0929eefa9a92d0fe676280ffa0f578bfcc13acf (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,265 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.8-py3-none-any.whl#sha256=5ba5488dc826c3fedeff46bf26fa143f856d2c61d40ca3e62c8dddf63b539b93 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,266 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.7-py3-none-any.whl#sha256=4f408b12a6d4f2612f0029239eb7b1416640a0c7675cb84271ff670fdbc8e18c (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,266 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.6-py3-none-any.whl#sha256=c649447e5801155952590ac23930b844de0627030479a8088e8be966d7346e5d (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,267 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.5-py3-none-any.whl#sha256=492fd40e11f153e5f87a07e46c919f65ac7f277cfc5d7cd0d97a410b70a49d51 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,267 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.1-py3-none-any.whl#sha256=a500ca3d5781f29f67266d2d1c9c8eba41e40cc54b29ea24308b7f8426009269 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,268 Skipping link: No binaries permitted for dnacauldron: https://www.piwheels.org/simple/dnacauldron/dnacauldron-0.1.0-py3-none-any.whl#sha256=c169eeca2cbba5fbb418b05c656b33623cbb6c4581eed3bbc59d0748da80fa28 (from https://www.piwheels.org/simple/dnacauldron/) 2023-05-25T21:56:30,268 Skipping link: not a file: https://www.piwheels.org/simple/dnacauldron/ 2023-05-25T21:56:30,269 Skipping link: not a file: https://pypi.org/simple/dnacauldron/ 2023-05-25T21:56:30,310 Given no hashes to check 1 links for project 'dnacauldron': discarding no candidates 2023-05-25T21:56:30,345 Collecting dnacauldron==2.0.8 2023-05-25T21:56:30,350 Created temporary directory: /tmp/pip-unpack-3a6gpuq5 2023-05-25T21:56:30,528 Downloading dnacauldron-2.0.8.tar.gz (86 kB) 2023-05-25T21:56:30,984 Added dnacauldron==2.0.8 from https://files.pythonhosted.org/packages/e5/30/3f5d9071f26e62384fb1b5f4205e5fb07cf539076d95734bfc705ab3e612/dnacauldron-2.0.8.tar.gz to build tracker '/tmp/pip-build-tracker-af8lsu6e' 2023-05-25T21:56:30,988 Running setup.py (path:/tmp/pip-wheel-ailuqtxu/dnacauldron_716c4e10661d4178ba1cdae7ac45b698/setup.py) egg_info for package dnacauldron 2023-05-25T21:56:30,989 Created temporary directory: /tmp/pip-pip-egg-info-ow0q5l7_ 2023-05-25T21:56:30,990 Preparing metadata (setup.py): started 2023-05-25T21:56:30,992 Running command python setup.py egg_info 2023-05-25T21:56:33,163 running egg_info 2023-05-25T21:56:33,165 creating /tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info 2023-05-25T21:56:33,233 writing /tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/PKG-INFO 2023-05-25T21:56:33,237 writing dependency_links to /tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/dependency_links.txt 2023-05-25T21:56:33,242 writing requirements to /tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/requires.txt 2023-05-25T21:56:33,244 writing top-level names to /tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/top_level.txt 2023-05-25T21:56:33,246 writing manifest file '/tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/SOURCES.txt' 2023-05-25T21:56:33,545 reading manifest file '/tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/SOURCES.txt' 2023-05-25T21:56:33,548 reading manifest template 'MANIFEST.in' 2023-05-25T21:56:33,592 adding license file 'LICENCE.txt' 2023-05-25T21:56:33,603 writing manifest file '/tmp/pip-pip-egg-info-ow0q5l7_/dnacauldron.egg-info/SOURCES.txt' 2023-05-25T21:56:33,745 Preparing metadata (setup.py): finished with status 'done' 2023-05-25T21:56:33,758 Source in /tmp/pip-wheel-ailuqtxu/dnacauldron_716c4e10661d4178ba1cdae7ac45b698 has version 2.0.8, which satisfies requirement dnacauldron==2.0.8 from https://files.pythonhosted.org/packages/e5/30/3f5d9071f26e62384fb1b5f4205e5fb07cf539076d95734bfc705ab3e612/dnacauldron-2.0.8.tar.gz 2023-05-25T21:56:33,760 Removed dnacauldron==2.0.8 from https://files.pythonhosted.org/packages/e5/30/3f5d9071f26e62384fb1b5f4205e5fb07cf539076d95734bfc705ab3e612/dnacauldron-2.0.8.tar.gz from build tracker '/tmp/pip-build-tracker-af8lsu6e' 2023-05-25T21:56:33,771 Created temporary directory: /tmp/pip-unpack-0xhb7yxt 2023-05-25T21:56:33,772 Building wheels for collected packages: dnacauldron 2023-05-25T21:56:33,782 Created temporary directory: /tmp/pip-wheel-ejterm5h 2023-05-25T21:56:33,782 Building wheel for dnacauldron (setup.py): started 2023-05-25T21:56:33,784 Destination directory: /tmp/pip-wheel-ejterm5h 2023-05-25T21:56:33,785 Running command python setup.py bdist_wheel 2023-05-25T21:56:35,966 running bdist_wheel 2023-05-25T21:56:36,718 running build 2023-05-25T21:56:36,719 running build_py 2023-05-25T21:56:36,792 creating build 2023-05-25T21:56:36,793 creating build/lib 2023-05-25T21:56:36,795 creating build/lib/dnacauldron 2023-05-25T21:56:36,797 copying dnacauldron/Filter.py -> build/lib/dnacauldron 2023-05-25T21:56:36,801 copying dnacauldron/version.py -> build/lib/dnacauldron 2023-05-25T21:56:36,805 copying dnacauldron/SequenceRepository.py -> build/lib/dnacauldron 2023-05-25T21:56:36,809 copying dnacauldron/__init__.py -> build/lib/dnacauldron 2023-05-25T21:56:36,813 copying dnacauldron/reports.py -> build/lib/dnacauldron 2023-05-25T21:56:36,816 copying dnacauldron/tools.py -> build/lib/dnacauldron 2023-05-25T21:56:36,821 creating build/lib/dnacauldron/Fragment 2023-05-25T21:56:36,823 copying dnacauldron/Fragment/__init__.py -> build/lib/dnacauldron/Fragment 2023-05-25T21:56:36,827 copying dnacauldron/Fragment/Fragment.py -> build/lib/dnacauldron/Fragment 2023-05-25T21:56:36,830 copying dnacauldron/Fragment/FragmentChain.py -> build/lib/dnacauldron/Fragment 2023-05-25T21:56:36,836 creating build/lib/dnacauldron/biotools 2023-05-25T21:56:36,838 copying dnacauldron/biotools/__init__.py -> build/lib/dnacauldron/biotools 2023-05-25T21:56:36,842 copying dnacauldron/biotools/sequence_io.py -> build/lib/dnacauldron/biotools 2023-05-25T21:56:36,847 copying dnacauldron/biotools/record_operations.py -> build/lib/dnacauldron/biotools 2023-05-25T21:56:36,851 copying dnacauldron/biotools/autoselect_enzyme.py -> build/lib/dnacauldron/biotools 2023-05-25T21:56:36,856 creating build/lib/dnacauldron/utils 2023-05-25T21:56:36,858 copying dnacauldron/utils/insert_parts_on_backbones.py -> build/lib/dnacauldron/utils 2023-05-25T21:56:36,863 copying dnacauldron/utils/__init__.py -> build/lib/dnacauldron/utils 2023-05-25T21:56:36,866 copying dnacauldron/utils/utils.py -> build/lib/dnacauldron/utils 2023-05-25T21:56:36,872 creating build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,874 copying dnacauldron/AssemblyMix/HomologousAssemblyMix.py -> build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,878 copying dnacauldron/AssemblyMix/__init__.py -> build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,881 copying dnacauldron/AssemblyMix/LigaseCyclingReactionMix.py -> build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,885 copying dnacauldron/AssemblyMix/RestrictionLigationMix.py -> build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,889 copying dnacauldron/AssemblyMix/AssemblyMix.py -> build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,893 copying dnacauldron/AssemblyMix/AssemblyMixError.py -> build/lib/dnacauldron/AssemblyMix 2023-05-25T21:56:36,898 creating build/lib/dnacauldron/Assembly 2023-05-25T21:56:36,899 copying dnacauldron/Assembly/__init__.py -> build/lib/dnacauldron/Assembly 2023-05-25T21:56:36,903 copying dnacauldron/Assembly/Assembly.py -> build/lib/dnacauldron/Assembly 2023-05-25T21:56:36,907 copying dnacauldron/Assembly/AssemblySimulation.py -> build/lib/dnacauldron/Assembly 2023-05-25T21:56:36,912 copying dnacauldron/Assembly/AssemblyFlaw.py -> build/lib/dnacauldron/Assembly 2023-05-25T21:56:36,917 creating build/lib/dnacauldron/AssemblyPlan 2023-05-25T21:56:36,919 copying dnacauldron/AssemblyPlan/AssemblyPlan.py -> build/lib/dnacauldron/AssemblyPlan 2023-05-25T21:56:36,923 copying dnacauldron/AssemblyPlan/__init__.py -> build/lib/dnacauldron/AssemblyPlan 2023-05-25T21:56:36,927 copying dnacauldron/AssemblyPlan/plot_leveled_graph.py -> build/lib/dnacauldron/AssemblyPlan 2023-05-25T21:56:36,931 copying dnacauldron/AssemblyPlan/AssemblyPlanSimulation.py -> build/lib/dnacauldron/AssemblyPlan 2023-05-25T21:56:36,938 creating build/lib/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:36,939 copying dnacauldron/Fragment/HomologousFragment/__init__.py -> build/lib/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:36,944 copying dnacauldron/Fragment/HomologousFragment/HomologousFragment.py -> build/lib/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:36,948 copying dnacauldron/Fragment/HomologousFragment/HomologyChecker.py -> build/lib/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:36,954 creating build/lib/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:36,955 copying dnacauldron/Fragment/StickyEndFragment/__init__.py -> build/lib/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:36,959 copying dnacauldron/Fragment/StickyEndFragment/StickyEndSeq.py -> build/lib/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:36,964 copying dnacauldron/Fragment/StickyEndFragment/StickyEndFragment.py -> build/lib/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:36,968 copying dnacauldron/Fragment/StickyEndFragment/StickyEnd.py -> build/lib/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:36,974 creating build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:36,976 copying dnacauldron/AssemblyMix/mixins/GraphsMixin.py -> build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:36,981 copying dnacauldron/AssemblyMix/mixins/__init__.py -> build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:36,984 copying dnacauldron/AssemblyMix/mixins/ConnectorsMixin.py -> build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:36,988 copying dnacauldron/AssemblyMix/mixins/PlotsMixin.py -> build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:36,992 copying dnacauldron/AssemblyMix/mixins/ConstructsMixin.py -> build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:36,997 copying dnacauldron/AssemblyMix/mixins/FragmentsMixin.py -> build/lib/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,002 creating build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,004 copying dnacauldron/AssemblyMix/StickyEndAssemblyMix/SlotsMixin.py -> build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,008 copying dnacauldron/AssemblyMix/StickyEndAssemblyMix/__init__.py -> build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,012 copying dnacauldron/AssemblyMix/StickyEndAssemblyMix/PlotsMixin.py -> build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,017 copying dnacauldron/AssemblyMix/StickyEndAssemblyMix/StickyEndAssemblyMix.py -> build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,022 creating build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,024 copying dnacauldron/Assembly/builtin_assembly_classes/__init__.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,028 copying dnacauldron/Assembly/builtin_assembly_classes/Type2sRestrictionAssembly.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,034 copying dnacauldron/Assembly/builtin_assembly_classes/OligoPairAnnealing.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,037 copying dnacauldron/Assembly/builtin_assembly_classes/GibsonAssembly.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,042 copying dnacauldron/Assembly/builtin_assembly_classes/BASICAssembly.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,047 copying dnacauldron/Assembly/builtin_assembly_classes/BioBrickStandardAssembly.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,051 copying dnacauldron/Assembly/builtin_assembly_classes/LigaseCyclingReactionAssembly.py -> build/lib/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,057 creating build/lib/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,059 copying dnacauldron/Assembly/AssemblyReportWriter/AssemblyPlotTranslator.py -> build/lib/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,063 copying dnacauldron/Assembly/AssemblyReportWriter/__init__.py -> build/lib/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,066 copying dnacauldron/Assembly/AssemblyReportWriter/plot_cuts.py -> build/lib/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,070 copying dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportPlotsMixin.py -> build/lib/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,074 copying dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportWriter.py -> build/lib/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,078 running egg_info 2023-05-25T21:56:37,227 writing dnacauldron.egg-info/PKG-INFO 2023-05-25T21:56:37,230 writing dependency_links to dnacauldron.egg-info/dependency_links.txt 2023-05-25T21:56:37,235 writing requirements to dnacauldron.egg-info/requires.txt 2023-05-25T21:56:37,237 writing top-level names to dnacauldron.egg-info/top_level.txt 2023-05-25T21:56:37,325 reading manifest file 'dnacauldron.egg-info/SOURCES.txt' 2023-05-25T21:56:37,337 reading manifest template 'MANIFEST.in' 2023-05-25T21:56:37,373 adding license file 'LICENCE.txt' 2023-05-25T21:56:37,388 writing manifest file 'dnacauldron.egg-info/SOURCES.txt' 2023-05-25T21:56:37,396 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'dnacauldron.report_assets' is absent from the `packages` configuration. 2023-05-25T21:56:37,396 !! 2023-05-25T21:56:37,397 ******************************************************************************** 2023-05-25T21:56:37,397 ############################ 2023-05-25T21:56:37,398 # Package would be ignored # 2023-05-25T21:56:37,398 ############################ 2023-05-25T21:56:37,398 Python recognizes 'dnacauldron.report_assets' as an importable package[^1], 2023-05-25T21:56:37,398 but it is absent from setuptools' `packages` configuration. 2023-05-25T21:56:37,399 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T21:56:37,399 package, please make sure that 'dnacauldron.report_assets' is explicitly added 2023-05-25T21:56:37,400 to the `packages` configuration field. 2023-05-25T21:56:37,400 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T21:56:37,401 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T21:56:37,401 instead of `find_packages(...)`/`find:`). 2023-05-25T21:56:37,402 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T21:56:37,403 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T21:56:37,404 If you don't want 'dnacauldron.report_assets' to be distributed and are 2023-05-25T21:56:37,404 already explicitly excluding 'dnacauldron.report_assets' via 2023-05-25T21:56:37,405 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T21:56:37,405 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T21:56:37,406 combination with a more fine grained `package-data` configuration. 2023-05-25T21:56:37,407 You can read more about "package data files" on setuptools documentation page: 2023-05-25T21:56:37,407 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T21:56:37,409 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T21:56:37,409 even if it does not contain any `.py` files. 2023-05-25T21:56:37,409 On the other hand, currently there is no concept of package data 2023-05-25T21:56:37,410 directory, all directories are treated like packages. 2023-05-25T21:56:37,410 ******************************************************************************** 2023-05-25T21:56:37,411 !! 2023-05-25T21:56:37,412 check.warn(importable) 2023-05-25T21:56:37,412 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'dnacauldron.report_assets.imgs' is absent from the `packages` configuration. 2023-05-25T21:56:37,413 !! 2023-05-25T21:56:37,414 ******************************************************************************** 2023-05-25T21:56:37,414 ############################ 2023-05-25T21:56:37,414 # Package would be ignored # 2023-05-25T21:56:37,415 ############################ 2023-05-25T21:56:37,415 Python recognizes 'dnacauldron.report_assets.imgs' as an importable package[^1], 2023-05-25T21:56:37,416 but it is absent from setuptools' `packages` configuration. 2023-05-25T21:56:37,418 This leads to an ambiguous overall configuration. If you want to distribute this 2023-05-25T21:56:37,418 package, please make sure that 'dnacauldron.report_assets.imgs' is explicitly added 2023-05-25T21:56:37,418 to the `packages` configuration field. 2023-05-25T21:56:37,419 Alternatively, you can also rely on setuptools' discovery methods 2023-05-25T21:56:37,419 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-05-25T21:56:37,420 instead of `find_packages(...)`/`find:`). 2023-05-25T21:56:37,421 You can read more about "package discovery" on setuptools documentation page: 2023-05-25T21:56:37,421 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-05-25T21:56:37,422 If you don't want 'dnacauldron.report_assets.imgs' to be distributed and are 2023-05-25T21:56:37,422 already explicitly excluding 'dnacauldron.report_assets.imgs' via 2023-05-25T21:56:37,423 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-05-25T21:56:37,423 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-05-25T21:56:37,423 combination with a more fine grained `package-data` configuration. 2023-05-25T21:56:37,424 You can read more about "package data files" on setuptools documentation page: 2023-05-25T21:56:37,425 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-05-25T21:56:37,426 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-05-25T21:56:37,426 even if it does not contain any `.py` files. 2023-05-25T21:56:37,426 On the other hand, currently there is no concept of package data 2023-05-25T21:56:37,427 directory, all directories are treated like packages. 2023-05-25T21:56:37,427 ******************************************************************************** 2023-05-25T21:56:37,428 !! 2023-05-25T21:56:37,428 check.warn(importable) 2023-05-25T21:56:37,429 creating build/lib/dnacauldron/report_assets 2023-05-25T21:56:37,429 copying dnacauldron/report_assets/report_style.css -> build/lib/dnacauldron/report_assets 2023-05-25T21:56:37,429 copying dnacauldron/report_assets/simulation_report.pug -> build/lib/dnacauldron/report_assets 2023-05-25T21:56:37,430 creating build/lib/dnacauldron/report_assets/imgs 2023-05-25T21:56:37,430 copying dnacauldron/report_assets/imgs/logo.png -> build/lib/dnacauldron/report_assets/imgs 2023-05-25T21:56:37,438 running build_scripts 2023-05-25T21:56:37,439 creating build/scripts-3.7 2023-05-25T21:56:37,440 copying and adjusting scripts/dnacauldron -> build/scripts-3.7 2023-05-25T21:56:37,443 changing mode of build/scripts-3.7/dnacauldron from 644 to 755 2023-05-25T21:56:37,517 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-25T21:56:37,517 !! 2023-05-25T21:56:37,518 ******************************************************************************** 2023-05-25T21:56:37,519 Please avoid running ``setup.py`` directly. 2023-05-25T21:56:37,519 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-25T21:56:37,519 other standards-based tools. 2023-05-25T21:56:37,520 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-25T21:56:37,520 ******************************************************************************** 2023-05-25T21:56:37,521 !! 2023-05-25T21:56:37,521 self.initialize_options() 2023-05-25T21:56:37,583 installing to build/bdist.linux-armv7l/wheel 2023-05-25T21:56:37,584 running install 2023-05-25T21:56:37,645 running install_lib 2023-05-25T21:56:37,713 creating build/bdist.linux-armv7l 2023-05-25T21:56:37,714 creating build/bdist.linux-armv7l/wheel 2023-05-25T21:56:37,718 creating build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,720 copying build/lib/dnacauldron/Filter.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,725 creating build/bdist.linux-armv7l/wheel/dnacauldron/report_assets 2023-05-25T21:56:37,726 copying build/lib/dnacauldron/report_assets/report_style.css -> build/bdist.linux-armv7l/wheel/dnacauldron/report_assets 2023-05-25T21:56:37,732 creating build/bdist.linux-armv7l/wheel/dnacauldron/report_assets/imgs 2023-05-25T21:56:37,733 copying build/lib/dnacauldron/report_assets/imgs/logo.png -> build/bdist.linux-armv7l/wheel/dnacauldron/report_assets/imgs 2023-05-25T21:56:37,739 copying build/lib/dnacauldron/report_assets/simulation_report.pug -> build/bdist.linux-armv7l/wheel/dnacauldron/report_assets 2023-05-25T21:56:37,742 copying build/lib/dnacauldron/version.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,746 copying build/lib/dnacauldron/SequenceRepository.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,751 creating build/bdist.linux-armv7l/wheel/dnacauldron/Fragment 2023-05-25T21:56:37,754 creating build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:37,756 copying build/lib/dnacauldron/Fragment/HomologousFragment/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:37,759 copying build/lib/dnacauldron/Fragment/HomologousFragment/HomologousFragment.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:37,764 copying build/lib/dnacauldron/Fragment/HomologousFragment/HomologyChecker.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/HomologousFragment 2023-05-25T21:56:37,768 creating build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:37,770 copying build/lib/dnacauldron/Fragment/StickyEndFragment/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:37,774 copying build/lib/dnacauldron/Fragment/StickyEndFragment/StickyEndSeq.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:37,778 copying build/lib/dnacauldron/Fragment/StickyEndFragment/StickyEndFragment.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:37,782 copying build/lib/dnacauldron/Fragment/StickyEndFragment/StickyEnd.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment/StickyEndFragment 2023-05-25T21:56:37,786 copying build/lib/dnacauldron/Fragment/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment 2023-05-25T21:56:37,789 copying build/lib/dnacauldron/Fragment/Fragment.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment 2023-05-25T21:56:37,793 copying build/lib/dnacauldron/Fragment/FragmentChain.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Fragment 2023-05-25T21:56:37,797 copying build/lib/dnacauldron/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,802 creating build/bdist.linux-armv7l/wheel/dnacauldron/biotools 2023-05-25T21:56:37,804 copying build/lib/dnacauldron/biotools/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/biotools 2023-05-25T21:56:37,808 copying build/lib/dnacauldron/biotools/sequence_io.py -> build/bdist.linux-armv7l/wheel/dnacauldron/biotools 2023-05-25T21:56:37,812 copying build/lib/dnacauldron/biotools/record_operations.py -> build/bdist.linux-armv7l/wheel/dnacauldron/biotools 2023-05-25T21:56:37,816 copying build/lib/dnacauldron/biotools/autoselect_enzyme.py -> build/bdist.linux-armv7l/wheel/dnacauldron/biotools 2023-05-25T21:56:37,822 creating build/bdist.linux-armv7l/wheel/dnacauldron/utils 2023-05-25T21:56:37,825 copying build/lib/dnacauldron/utils/insert_parts_on_backbones.py -> build/bdist.linux-armv7l/wheel/dnacauldron/utils 2023-05-25T21:56:37,829 copying build/lib/dnacauldron/utils/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/utils 2023-05-25T21:56:37,833 copying build/lib/dnacauldron/utils/utils.py -> build/bdist.linux-armv7l/wheel/dnacauldron/utils 2023-05-25T21:56:37,837 copying build/lib/dnacauldron/reports.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,841 creating build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,844 creating build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,846 copying build/lib/dnacauldron/AssemblyMix/mixins/GraphsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,850 copying build/lib/dnacauldron/AssemblyMix/mixins/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,853 copying build/lib/dnacauldron/AssemblyMix/mixins/ConnectorsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,857 copying build/lib/dnacauldron/AssemblyMix/mixins/PlotsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,861 copying build/lib/dnacauldron/AssemblyMix/mixins/ConstructsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,865 copying build/lib/dnacauldron/AssemblyMix/mixins/FragmentsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/mixins 2023-05-25T21:56:37,869 copying build/lib/dnacauldron/AssemblyMix/HomologousAssemblyMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,872 copying build/lib/dnacauldron/AssemblyMix/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,876 copying build/lib/dnacauldron/AssemblyMix/LigaseCyclingReactionMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,880 copying build/lib/dnacauldron/AssemblyMix/RestrictionLigationMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,885 creating build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,887 copying build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix/SlotsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,890 copying build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,894 copying build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix/PlotsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,898 copying build/lib/dnacauldron/AssemblyMix/StickyEndAssemblyMix/StickyEndAssemblyMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix/StickyEndAssemblyMix 2023-05-25T21:56:37,902 copying build/lib/dnacauldron/AssemblyMix/AssemblyMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,905 copying build/lib/dnacauldron/AssemblyMix/AssemblyMixError.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2023-05-25T21:56:37,910 creating build/bdist.linux-armv7l/wheel/dnacauldron/Assembly 2023-05-25T21:56:37,913 creating build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,915 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,918 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/Type2sRestrictionAssembly.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,923 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/OligoPairAnnealing.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,926 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/GibsonAssembly.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,931 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/BASICAssembly.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,935 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/BioBrickStandardAssembly.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,940 copying build/lib/dnacauldron/Assembly/builtin_assembly_classes/LigaseCyclingReactionAssembly.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/builtin_assembly_classes 2023-05-25T21:56:37,944 copying build/lib/dnacauldron/Assembly/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly 2023-05-25T21:56:37,947 copying build/lib/dnacauldron/Assembly/Assembly.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly 2023-05-25T21:56:37,952 copying build/lib/dnacauldron/Assembly/AssemblySimulation.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly 2023-05-25T21:56:37,957 creating build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,958 copying build/lib/dnacauldron/Assembly/AssemblyReportWriter/AssemblyPlotTranslator.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,962 copying build/lib/dnacauldron/Assembly/AssemblyReportWriter/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,965 copying build/lib/dnacauldron/Assembly/AssemblyReportWriter/plot_cuts.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,969 copying build/lib/dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportPlotsMixin.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,973 copying build/lib/dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportWriter.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly/AssemblyReportWriter 2023-05-25T21:56:37,977 copying build/lib/dnacauldron/Assembly/AssemblyFlaw.py -> build/bdist.linux-armv7l/wheel/dnacauldron/Assembly 2023-05-25T21:56:37,982 copying build/lib/dnacauldron/tools.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2023-05-25T21:56:37,987 creating build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyPlan 2023-05-25T21:56:37,989 copying build/lib/dnacauldron/AssemblyPlan/AssemblyPlan.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyPlan 2023-05-25T21:56:37,995 copying build/lib/dnacauldron/AssemblyPlan/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyPlan 2023-05-25T21:56:38,000 copying build/lib/dnacauldron/AssemblyPlan/plot_leveled_graph.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyPlan 2023-05-25T21:56:38,005 copying build/lib/dnacauldron/AssemblyPlan/AssemblyPlanSimulation.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyPlan 2023-05-25T21:56:38,009 running install_egg_info 2023-05-25T21:56:38,078 Copying dnacauldron.egg-info to build/bdist.linux-armv7l/wheel/dnacauldron-2.0.8-py3.7.egg-info 2023-05-25T21:56:38,098 running install_scripts 2023-05-25T21:56:38,100 creating build/bdist.linux-armv7l/wheel/dnacauldron-2.0.8.data 2023-05-25T21:56:38,101 creating build/bdist.linux-armv7l/wheel/dnacauldron-2.0.8.data/scripts 2023-05-25T21:56:38,103 copying build/scripts-3.7/dnacauldron -> build/bdist.linux-armv7l/wheel/dnacauldron-2.0.8.data/scripts 2023-05-25T21:56:38,106 changing mode of build/bdist.linux-armv7l/wheel/dnacauldron-2.0.8.data/scripts/dnacauldron to 755 2023-05-25T21:56:38,142 creating build/bdist.linux-armv7l/wheel/dnacauldron-2.0.8.dist-info/WHEEL 2023-05-25T21:56:38,146 creating '/tmp/pip-wheel-ejterm5h/dnacauldron-2.0.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-25T21:56:38,152 adding 'dnacauldron/Filter.py' 2023-05-25T21:56:38,156 adding 'dnacauldron/SequenceRepository.py' 2023-05-25T21:56:38,160 adding 'dnacauldron/__init__.py' 2023-05-25T21:56:38,163 adding 'dnacauldron/reports.py' 2023-05-25T21:56:38,165 adding 'dnacauldron/tools.py' 2023-05-25T21:56:38,167 adding 'dnacauldron/version.py' 2023-05-25T21:56:38,172 adding 'dnacauldron/Assembly/Assembly.py' 2023-05-25T21:56:38,174 adding 'dnacauldron/Assembly/AssemblyFlaw.py' 2023-05-25T21:56:38,178 adding 'dnacauldron/Assembly/AssemblySimulation.py' 2023-05-25T21:56:38,180 adding 'dnacauldron/Assembly/__init__.py' 2023-05-25T21:56:38,184 adding 'dnacauldron/Assembly/AssemblyReportWriter/AssemblyPlotTranslator.py' 2023-05-25T21:56:38,186 adding 'dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportPlotsMixin.py' 2023-05-25T21:56:38,190 adding 'dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportWriter.py' 2023-05-25T21:56:38,194 adding 'dnacauldron/Assembly/AssemblyReportWriter/__init__.py' 2023-05-25T21:56:38,197 adding 'dnacauldron/Assembly/AssemblyReportWriter/plot_cuts.py' 2023-05-25T21:56:38,202 adding 'dnacauldron/Assembly/builtin_assembly_classes/BASICAssembly.py' 2023-05-25T21:56:38,206 adding 'dnacauldron/Assembly/builtin_assembly_classes/BioBrickStandardAssembly.py' 2023-05-25T21:56:38,211 adding 'dnacauldron/Assembly/builtin_assembly_classes/GibsonAssembly.py' 2023-05-25T21:56:38,215 adding 'dnacauldron/Assembly/builtin_assembly_classes/LigaseCyclingReactionAssembly.py' 2023-05-25T21:56:38,219 adding 'dnacauldron/Assembly/builtin_assembly_classes/OligoPairAnnealing.py' 2023-05-25T21:56:38,224 adding 'dnacauldron/Assembly/builtin_assembly_classes/Type2sRestrictionAssembly.py' 2023-05-25T21:56:38,227 adding 'dnacauldron/Assembly/builtin_assembly_classes/__init__.py' 2023-05-25T21:56:38,232 adding 'dnacauldron/AssemblyMix/AssemblyMix.py' 2023-05-25T21:56:38,235 adding 'dnacauldron/AssemblyMix/AssemblyMixError.py' 2023-05-25T21:56:38,238 adding 'dnacauldron/AssemblyMix/HomologousAssemblyMix.py' 2023-05-25T21:56:38,242 adding 'dnacauldron/AssemblyMix/LigaseCyclingReactionMix.py' 2023-05-25T21:56:38,246 adding 'dnacauldron/AssemblyMix/RestrictionLigationMix.py' 2023-05-25T21:56:38,249 adding 'dnacauldron/AssemblyMix/__init__.py' 2023-05-25T21:56:38,254 adding 'dnacauldron/AssemblyMix/StickyEndAssemblyMix/PlotsMixin.py' 2023-05-25T21:56:38,258 adding 'dnacauldron/AssemblyMix/StickyEndAssemblyMix/SlotsMixin.py' 2023-05-25T21:56:38,262 adding 'dnacauldron/AssemblyMix/StickyEndAssemblyMix/StickyEndAssemblyMix.py' 2023-05-25T21:56:38,265 adding 'dnacauldron/AssemblyMix/StickyEndAssemblyMix/__init__.py' 2023-05-25T21:56:38,269 adding 'dnacauldron/AssemblyMix/mixins/ConnectorsMixin.py' 2023-05-25T21:56:38,274 adding 'dnacauldron/AssemblyMix/mixins/ConstructsMixin.py' 2023-05-25T21:56:38,277 adding 'dnacauldron/AssemblyMix/mixins/FragmentsMixin.py' 2023-05-25T21:56:38,281 adding 'dnacauldron/AssemblyMix/mixins/GraphsMixin.py' 2023-05-25T21:56:38,284 adding 'dnacauldron/AssemblyMix/mixins/PlotsMixin.py' 2023-05-25T21:56:38,287 adding 'dnacauldron/AssemblyMix/mixins/__init__.py' 2023-05-25T21:56:38,293 adding 'dnacauldron/AssemblyPlan/AssemblyPlan.py' 2023-05-25T21:56:38,299 adding 'dnacauldron/AssemblyPlan/AssemblyPlanSimulation.py' 2023-05-25T21:56:38,302 adding 'dnacauldron/AssemblyPlan/__init__.py' 2023-05-25T21:56:38,306 adding 'dnacauldron/AssemblyPlan/plot_leveled_graph.py' 2023-05-25T21:56:38,310 adding 'dnacauldron/Fragment/Fragment.py' 2023-05-25T21:56:38,314 adding 'dnacauldron/Fragment/FragmentChain.py' 2023-05-25T21:56:38,317 adding 'dnacauldron/Fragment/__init__.py' 2023-05-25T21:56:38,321 adding 'dnacauldron/Fragment/HomologousFragment/HomologousFragment.py' 2023-05-25T21:56:38,324 adding 'dnacauldron/Fragment/HomologousFragment/HomologyChecker.py' 2023-05-25T21:56:38,328 adding 'dnacauldron/Fragment/HomologousFragment/__init__.py' 2023-05-25T21:56:38,331 adding 'dnacauldron/Fragment/StickyEndFragment/StickyEnd.py' 2023-05-25T21:56:38,335 adding 'dnacauldron/Fragment/StickyEndFragment/StickyEndFragment.py' 2023-05-25T21:56:38,339 adding 'dnacauldron/Fragment/StickyEndFragment/StickyEndSeq.py' 2023-05-25T21:56:38,342 adding 'dnacauldron/Fragment/StickyEndFragment/__init__.py' 2023-05-25T21:56:38,346 adding 'dnacauldron/biotools/__init__.py' 2023-05-25T21:56:38,348 adding 'dnacauldron/biotools/autoselect_enzyme.py' 2023-05-25T21:56:38,351 adding 'dnacauldron/biotools/record_operations.py' 2023-05-25T21:56:38,355 adding 'dnacauldron/biotools/sequence_io.py' 2023-05-25T21:56:38,359 adding 'dnacauldron/report_assets/report_style.css' 2023-05-25T21:56:38,361 adding 'dnacauldron/report_assets/simulation_report.pug' 2023-05-25T21:56:38,369 adding 'dnacauldron/report_assets/imgs/logo.png' 2023-05-25T21:56:38,373 adding 'dnacauldron/utils/__init__.py' 2023-05-25T21:56:38,377 adding 'dnacauldron/utils/insert_parts_on_backbones.py' 2023-05-25T21:56:38,381 adding 'dnacauldron/utils/utils.py' 2023-05-25T21:56:38,385 adding 'dnacauldron-2.0.8.data/scripts/dnacauldron' 2023-05-25T21:56:38,390 adding 'dnacauldron-2.0.8.dist-info/LICENCE.txt' 2023-05-25T21:56:38,392 adding 'dnacauldron-2.0.8.dist-info/METADATA' 2023-05-25T21:56:38,395 adding 'dnacauldron-2.0.8.dist-info/WHEEL' 2023-05-25T21:56:38,397 adding 'dnacauldron-2.0.8.dist-info/top_level.txt' 2023-05-25T21:56:38,401 adding 'dnacauldron-2.0.8.dist-info/RECORD' 2023-05-25T21:56:38,410 removing build/bdist.linux-armv7l/wheel 2023-05-25T21:56:38,630 Building wheel for dnacauldron (setup.py): finished with status 'done' 2023-05-25T21:56:38,640 Created wheel for dnacauldron: filename=dnacauldron-2.0.8-py3-none-any.whl size=104942 sha256=86ec60f02ceafe347eb22a0f734861bc7e3c3c61c23ef5d6512509c878f210c9 2023-05-25T21:56:38,643 Stored in directory: /tmp/pip-ephem-wheel-cache-_7awpicx/wheels/3b/64/a4/504abcd4b68a88e59a4d2c9920c07930097ac124049824d631 2023-05-25T21:56:38,674 Successfully built dnacauldron 2023-05-25T21:56:38,690 Removed build tracker: '/tmp/pip-build-tracker-af8lsu6e'