2023-05-29T05:50:00,114 Created temporary directory: /tmp/pip-build-tracker-u_g44xma 2023-05-29T05:50:00,117 Initialized build tracking at /tmp/pip-build-tracker-u_g44xma 2023-05-29T05:50:00,118 Created build tracker: /tmp/pip-build-tracker-u_g44xma 2023-05-29T05:50:00,118 Entered build tracker: /tmp/pip-build-tracker-u_g44xma 2023-05-29T05:50:00,119 Created temporary directory: /tmp/pip-wheel-9swztbca 2023-05-29T05:50:00,128 Created temporary directory: /tmp/pip-ephem-wheel-cache-99_endzd 2023-05-29T05:50:00,182 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-29T05:50:00,190 2 location(s) to search for versions of pyfastner: 2023-05-29T05:50:00,190 * https://pypi.org/simple/pyfastner/ 2023-05-29T05:50:00,190 * https://www.piwheels.org/simple/pyfastner/ 2023-05-29T05:50:00,191 Fetching project page and analyzing links: https://pypi.org/simple/pyfastner/ 2023-05-29T05:50:00,192 Getting page https://pypi.org/simple/pyfastner/ 2023-05-29T05:50:00,197 Found index url https://pypi.org/simple/ 2023-05-29T05:50:00,403 Fetched page https://pypi.org/simple/pyfastner/ as application/vnd.pypi.simple.v1+json 2023-05-29T05:50:00,417 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/69/e6/0c573de09cb1dd776400fa867952fd637594a2420bd21b2d770cced3f9af/PyFastNER-1.0.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,417 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/6e/89/4cc7171fa8b98e1cdfee0b6de68cbbee358d75fa51205b18957f720411ca/PyFastNER-1.0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,418 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/7d/b3/58f90d908c6c0625513668bc2994e3ac09e32b3a13dea9dd08eb50844b7c/PyFastNER-1.0.2.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,419 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/b4/ca/d7cdf2374cc3409e8eb0ea72437dac25f376f1f52f6e183ad036fd01e522/PyFastNER-1.0.3.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,419 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/62/1e/76b0e33a96f009bffffb11ff0c3319c4778547d63b8455c0cc32ec214006/PyFastNER-1.0.4.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,420 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/46/51/dac36f080c23d3268da80aefba0284181f130dc7ac85e6c1a248e5f53e7d/PyFastNER-1.0.5.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,420 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/59/08/5252cdf5912eafd31602be167099abfe745cdd0fa51350ec4a3b9a327672/PyFastNER-1.0.6.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,421 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/61/c4/52601fbb09f71ef7ec87a30fb5a6560ee98f0902b8ce8a9c97483211f5c4/PyFastNER-1.0.7.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,421 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/6a/75/9b05fa50ecda371114fd3b36159104a85239254b63776095974b6057c3ca/PyFastNER-1.0.8.dev1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,422 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/56/8a/a817cc3246a30d68d6acf6f83e9e2d0978b63cab1b6e4287c99cc969a613/PyFastNER-1.0.8.dev2-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,422 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/be/54/67c77cf2b60a22f51d85bd101ab134a294d4fb82f9d5203988c258c70713/PyFastNER-1.0.8b1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,423 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/cd/92/173cb3051b3e501320ec6b997652edf139f6105966fa0814b63dda186f8f/PyFastNER-1.0.8b2-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,423 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/2c/0c/5852dff19cf2aec10f927593cf92990f05c3060b412c3b68a8504133b9d4/PyFastNER-1.0.8b4-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,424 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/6e/98/f96bdfbd0685d7bd4a0505f5f7ebe2ca4e161b9ba5dbf486f43e4f221188/PyFastNER-1.0.8b6-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,424 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/52/0f/bada16ab363b168b0e0014c5057624366f5095770ef10bbfc3c68d20781e/PyFastNER-1.0.8b7-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,425 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/8e/a7/d4278d5af68e1a0cdf81e560323230c3459ecf7c5fd6f24586702592a7a7/PyFastNER-1.0.8b8-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,425 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/b5/59/69bc37fb1d40e16e0aed0857997c4e96ecc2ed3b69afe61b643532d3a38f/PyFastNER-1.0.8b9-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,426 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/20/78/f41ad19265d950f4190358ab0665c2df573444582119039796cd6cad3485/PyFastNER-1.0.8b10-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,426 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/0c/bf/9adf7ef49985ce8ace8773ff8c8172dcdc00be9b6306dbdca84a5968a546/PyFastNER-1.0.8b13-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,427 Found link https://files.pythonhosted.org/packages/8e/f5/c530a2d3074b6dd5a75c0a3585b721df7dc57a00c473e2e84c0ac61c4c17/PyFastNER-1.0.8b13.tar.gz (from https://pypi.org/simple/pyfastner/), version: 1.0.8b13 2023-05-29T05:50:00,427 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/e6/11/7a9fbf823e872568f6ff88de4b692d332179e9cf187f1cfbe91303d42641/PyFastNER-1.0.8-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,428 Found link https://files.pythonhosted.org/packages/0f/55/2753242e394b930b1742ef823c6d21c8568cb474727ab040cb76c65a43ab/PyFastNER-1.0.8.tar.gz (from https://pypi.org/simple/pyfastner/), version: 1.0.8 2023-05-29T05:50:00,429 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/6a/c9/a8e95542b1d67489afb44210acc23e4a5a31ceef51445b1e73e8a6a35b0f/PyFastNER-1.0.9b1-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,429 Found link https://files.pythonhosted.org/packages/d8/6d/aef1f47a54e20015108bee821f6ed12be5f88f327ce3c1c26035eefb7fab/PyFastNER-1.0.9b1.tar.gz (from https://pypi.org/simple/pyfastner/), version: 1.0.9b1 2023-05-29T05:50:00,430 Skipping link: No binaries permitted for pyfastner: https://files.pythonhosted.org/packages/fe/2b/2e7f8e693de944597fb13a3f3fcb8d1a718880116cfa3711bc85b88c385f/PyFastNER-1.0.9-py3-none-any.whl (from https://pypi.org/simple/pyfastner/) 2023-05-29T05:50:00,430 Found link https://files.pythonhosted.org/packages/6c/1d/69fdcbbf79dc04cf83da5f910348f3449384e518628690dcf2609fda3302/PyFastNER-1.0.9.tar.gz (from https://pypi.org/simple/pyfastner/), version: 1.0.9 2023-05-29T05:50:00,431 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyfastner/ 2023-05-29T05:50:00,432 Getting page https://www.piwheels.org/simple/pyfastner/ 2023-05-29T05:50:00,434 Found index url https://www.piwheels.org/simple/ 2023-05-29T05:50:00,660 Fetched page https://www.piwheels.org/simple/pyfastner/ as text/html 2023-05-29T05:50:00,665 Skipping link: No binaries permitted for pyfastner: https://www.piwheels.org/simple/pyfastner/PyFastNER-1.0.9b1-py3-none-any.whl#sha256=6d44cd70089bb21cf72bd0ec975e7c446d74323fe4d108efb251d5f37cd01992 (from https://www.piwheels.org/simple/pyfastner/) 2023-05-29T05:50:00,665 Skipping link: No binaries permitted for pyfastner: https://www.piwheels.org/simple/pyfastner/PyFastNER-1.0.8-py3-none-any.whl#sha256=0d14bf3f80b77c4fd5c88bd9b2dffe73a699ef15557e3a0b6cbc8091806b6df4 (from https://www.piwheels.org/simple/pyfastner/) 2023-05-29T05:50:00,666 Skipping link: No binaries permitted for pyfastner: https://www.piwheels.org/simple/pyfastner/PyFastNER-1.0.8b13-py3-none-any.whl#sha256=5de60d0dcbd696243f908fa33a63e3d2fbe6133ef0cad39831c0f26fc394aa75 (from https://www.piwheels.org/simple/pyfastner/) 2023-05-29T05:50:00,666 Skipping link: not a file: https://www.piwheels.org/simple/pyfastner/ 2023-05-29T05:50:00,667 Skipping link: not a file: https://pypi.org/simple/pyfastner/ 2023-05-29T05:50:00,700 Given no hashes to check 1 links for project 'pyfastner': discarding no candidates 2023-05-29T05:50:00,745 Collecting pyfastner==1.0.9 2023-05-29T05:50:00,750 Created temporary directory: /tmp/pip-unpack-_pkelohs 2023-05-29T05:50:00,931 Downloading PyFastNER-1.0.9.tar.gz (13 kB) 2023-05-29T05:50:01,034 Added pyfastner==1.0.9 from https://files.pythonhosted.org/packages/6c/1d/69fdcbbf79dc04cf83da5f910348f3449384e518628690dcf2609fda3302/PyFastNER-1.0.9.tar.gz to build tracker '/tmp/pip-build-tracker-u_g44xma' 2023-05-29T05:50:01,038 Running setup.py (path:/tmp/pip-wheel-9swztbca/pyfastner_16574e4e5a304474bbccdcf0cd7afaeb/setup.py) egg_info for package pyfastner 2023-05-29T05:50:01,039 Created temporary directory: /tmp/pip-pip-egg-info-7wgt9iv2 2023-05-29T05:50:01,040 Preparing metadata (setup.py): started 2023-05-29T05:50:01,042 Running command python setup.py egg_info 2023-05-29T05:50:04,059 include dir ['/tmp/pip-wheel-9swztbca/pyfastner_16574e4e5a304474bbccdcf0cd7afaeb/PyFastNER', '/tmp/pip-wheel-9swztbca/pyfastner_16574e4e5a304474bbccdcf0cd7afaeb'] 2023-05-29T05:50:04,465 running egg_info 2023-05-29T05:50:04,469 creating /tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info 2023-05-29T05:50:04,527 writing /tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/PKG-INFO 2023-05-29T05:50:04,532 writing dependency_links to /tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/dependency_links.txt 2023-05-29T05:50:04,537 writing requirements to /tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/requires.txt 2023-05-29T05:50:04,540 writing top-level names to /tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/top_level.txt 2023-05-29T05:50:04,543 writing manifest file '/tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/SOURCES.txt' 2023-05-29T05:50:04,727 reading manifest file '/tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/SOURCES.txt' 2023-05-29T05:50:04,731 adding license file 'LICENSE' 2023-05-29T05:50:04,737 writing manifest file '/tmp/pip-pip-egg-info-7wgt9iv2/PyFastNER.egg-info/SOURCES.txt' 2023-05-29T05:50:04,932 Preparing metadata (setup.py): finished with status 'done' 2023-05-29T05:50:04,945 Source in /tmp/pip-wheel-9swztbca/pyfastner_16574e4e5a304474bbccdcf0cd7afaeb has version 1.0.9, which satisfies requirement pyfastner==1.0.9 from https://files.pythonhosted.org/packages/6c/1d/69fdcbbf79dc04cf83da5f910348f3449384e518628690dcf2609fda3302/PyFastNER-1.0.9.tar.gz 2023-05-29T05:50:04,947 Removed pyfastner==1.0.9 from https://files.pythonhosted.org/packages/6c/1d/69fdcbbf79dc04cf83da5f910348f3449384e518628690dcf2609fda3302/PyFastNER-1.0.9.tar.gz from build tracker '/tmp/pip-build-tracker-u_g44xma' 2023-05-29T05:50:04,957 Created temporary directory: /tmp/pip-unpack-u5sgdrr1 2023-05-29T05:50:04,959 Building wheels for collected packages: pyfastner 2023-05-29T05:50:04,967 Created temporary directory: /tmp/pip-wheel-5drqayf9 2023-05-29T05:50:04,968 Building wheel for pyfastner (setup.py): started 2023-05-29T05:50:04,975 Destination directory: /tmp/pip-wheel-5drqayf9 2023-05-29T05:50:04,975 Running command python setup.py bdist_wheel 2023-05-29T05:50:06,550 include dir ['/tmp/pip-wheel-9swztbca/pyfastner_16574e4e5a304474bbccdcf0cd7afaeb/PyFastNER', '/tmp/pip-wheel-9swztbca/pyfastner_16574e4e5a304474bbccdcf0cd7afaeb'] 2023-05-29T05:50:08,615 running bdist_wheel 2023-05-29T05:50:08,793 running build 2023-05-29T05:50:08,794 running build_py 2023-05-29T05:50:08,859 creating build 2023-05-29T05:50:08,861 creating build/lib 2023-05-29T05:50:08,863 creating build/lib/PyFastNER 2023-05-29T05:50:08,866 copying PyFastNER/IOUtils.py -> build/lib/PyFastNER 2023-05-29T05:50:08,871 copying PyFastNER/ReplicationFunctionsLambda.py -> build/lib/PyFastNER 2023-05-29T05:50:08,876 copying PyFastNER/version.py -> build/lib/PyFastNER 2023-05-29T05:50:08,880 copying PyFastNER/FastCNER.py -> build/lib/PyFastNER 2023-05-29T05:50:08,885 copying PyFastNER/WildCardFunctions.py -> build/lib/PyFastNER 2023-05-29T05:50:08,889 copying PyFastNER/FastNER.py -> build/lib/PyFastNER 2023-05-29T05:50:08,892 copying PyFastNER/__init__.py -> build/lib/PyFastNER 2023-05-29T05:50:08,899 copying PyFastNER/CFastCNER.pyx -> build/lib/PyFastNER 2023-05-29T05:50:08,976 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-29T05:50:08,976 !! 2023-05-29T05:50:08,977 ******************************************************************************** 2023-05-29T05:50:08,977 Please avoid running ``setup.py`` directly. 2023-05-29T05:50:08,978 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-29T05:50:08,978 other standards-based tools. 2023-05-29T05:50:08,979 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-29T05:50:08,979 ******************************************************************************** 2023-05-29T05:50:08,980 !! 2023-05-29T05:50:08,980 self.initialize_options() 2023-05-29T05:50:09,037 installing to build/bdist.linux-armv7l/wheel 2023-05-29T05:50:09,037 running install 2023-05-29T05:50:09,095 running install_lib 2023-05-29T05:50:09,159 creating build/bdist.linux-armv7l 2023-05-29T05:50:09,160 creating build/bdist.linux-armv7l/wheel 2023-05-29T05:50:09,165 creating build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,167 copying build/lib/PyFastNER/IOUtils.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,173 copying build/lib/PyFastNER/CFastCNER.pyx -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,179 copying build/lib/PyFastNER/ReplicationFunctionsLambda.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,183 copying build/lib/PyFastNER/version.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,187 copying build/lib/PyFastNER/FastCNER.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,192 copying build/lib/PyFastNER/WildCardFunctions.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,196 copying build/lib/PyFastNER/FastNER.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,200 copying build/lib/PyFastNER/__init__.py -> build/bdist.linux-armv7l/wheel/PyFastNER 2023-05-29T05:50:09,203 running install_data 2023-05-29T05:50:09,264 creating build/bdist.linux-armv7l/wheel/PyFastNER-1.0.9.data 2023-05-29T05:50:09,265 creating build/bdist.linux-armv7l/wheel/PyFastNER-1.0.9.data/data 2023-05-29T05:50:09,268 creating build/bdist.linux-armv7l/wheel/PyFastNER-1.0.9.data/data/demo_data 2023-05-29T05:50:09,270 copying conf/crule_test.tsv -> build/bdist.linux-armv7l/wheel/PyFastNER-1.0.9.data/data/demo_data 2023-05-29T05:50:09,274 running install_egg_info 2023-05-29T05:50:09,422 running egg_info 2023-05-29T05:50:09,479 writing PyFastNER.egg-info/PKG-INFO 2023-05-29T05:50:09,483 writing dependency_links to PyFastNER.egg-info/dependency_links.txt 2023-05-29T05:50:09,487 writing requirements to PyFastNER.egg-info/requires.txt 2023-05-29T05:50:09,489 writing top-level names to PyFastNER.egg-info/top_level.txt 2023-05-29T05:50:09,556 reading manifest file 'PyFastNER.egg-info/SOURCES.txt' 2023-05-29T05:50:09,560 adding license file 'LICENSE' 2023-05-29T05:50:09,566 writing manifest file 'PyFastNER.egg-info/SOURCES.txt' 2023-05-29T05:50:09,569 Copying PyFastNER.egg-info to build/bdist.linux-armv7l/wheel/PyFastNER-1.0.9-py3.7.egg-info 2023-05-29T05:50:09,591 running install_scripts 2023-05-29T05:50:09,622 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-05-29T05:50:09,632 creating build/bdist.linux-armv7l/wheel/PyFastNER-1.0.9.dist-info/WHEEL 2023-05-29T05:50:09,637 creating '/tmp/pip-wheel-5drqayf9/PyFastNER-1.0.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-29T05:50:09,646 adding 'PyFastNER/CFastCNER.pyx' 2023-05-29T05:50:09,652 adding 'PyFastNER/FastCNER.py' 2023-05-29T05:50:09,656 adding 'PyFastNER/FastNER.py' 2023-05-29T05:50:09,660 adding 'PyFastNER/IOUtils.py' 2023-05-29T05:50:09,663 adding 'PyFastNER/ReplicationFunctionsLambda.py' 2023-05-29T05:50:09,667 adding 'PyFastNER/WildCardFunctions.py' 2023-05-29T05:50:09,670 adding 'PyFastNER/__init__.py' 2023-05-29T05:50:09,673 adding 'PyFastNER/version.py' 2023-05-29T05:50:09,679 adding 'PyFastNER-1.0.9.data/data/demo_data/crule_test.tsv' 2023-05-29T05:50:09,687 adding 'PyFastNER-1.0.9.dist-info/LICENSE' 2023-05-29T05:50:09,690 adding 'PyFastNER-1.0.9.dist-info/METADATA' 2023-05-29T05:50:09,693 adding 'PyFastNER-1.0.9.dist-info/WHEEL' 2023-05-29T05:50:09,696 adding 'PyFastNER-1.0.9.dist-info/top_level.txt' 2023-05-29T05:50:09,698 adding 'PyFastNER-1.0.9.dist-info/RECORD' 2023-05-29T05:50:09,701 removing build/bdist.linux-armv7l/wheel 2023-05-29T05:50:09,938 Building wheel for pyfastner (setup.py): finished with status 'done' 2023-05-29T05:50:09,946 Created wheel for pyfastner: filename=PyFastNER-1.0.9-py3-none-any.whl size=18303 sha256=3612d218c6a6db54cf6434efe042c426af853fcfa9f1a27d2f30b583d039a1e9 2023-05-29T05:50:09,948 Stored in directory: /tmp/pip-ephem-wheel-cache-99_endzd/wheels/a4/59/9f/22a13e8e9ba73de38e4c28858384538f6136453f0bb04764c7 2023-05-29T05:50:09,975 Successfully built pyfastner 2023-05-29T05:50:10,001 Removed build tracker: '/tmp/pip-build-tracker-u_g44xma'