2023-05-30T10:35:06,202 Created temporary directory: /tmp/pip-build-tracker-6ssmhm_t
2023-05-30T10:35:06,205 Initialized build tracking at /tmp/pip-build-tracker-6ssmhm_t
2023-05-30T10:35:06,205 Created build tracker: /tmp/pip-build-tracker-6ssmhm_t
2023-05-30T10:35:06,205 Entered build tracker: /tmp/pip-build-tracker-6ssmhm_t
2023-05-30T10:35:06,207 Created temporary directory: /tmp/pip-wheel-2nuund_n
2023-05-30T10:35:06,215 Created temporary directory: /tmp/pip-ephem-wheel-cache-zrrs9jub
2023-05-30T10:35:06,267 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-05-30T10:35:06,275 2 location(s) to search for versions of kmergenetyper:
2023-05-30T10:35:06,275 * https://pypi.org/simple/kmergenetyper/
2023-05-30T10:35:06,275 * https://www.piwheels.org/simple/kmergenetyper/
2023-05-30T10:35:06,276 Fetching project page and analyzing links: https://pypi.org/simple/kmergenetyper/
2023-05-30T10:35:06,277 Getting page https://pypi.org/simple/kmergenetyper/
2023-05-30T10:35:06,280 Found index url https://pypi.org/simple/
2023-05-30T10:35:06,467 Fetched page https://pypi.org/simple/kmergenetyper/ as application/vnd.pypi.simple.v1+json
2023-05-30T10:35:06,476   Found link https://files.pythonhosted.org/packages/07/e1/32da0abd3e1a424d0dfdfababf8f55009a9070f094daba8269857c24b6fb/kmergenetyper-1.0.0.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.0
2023-05-30T10:35:06,477   Found link https://files.pythonhosted.org/packages/ef/4b/5da7fc6c85ee329fdbad2f7cd0c556baf9e43a19267f4693def6b0e9bf55/kmergenetyper-1.0.1.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.1
2023-05-30T10:35:06,477   Found link https://files.pythonhosted.org/packages/0c/ea/c9704184cd46f95e44d28df008c16492f8d116a0312a524a40dc33015ad4/kmergenetyper-1.0.2.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.2
2023-05-30T10:35:06,478   Found link https://files.pythonhosted.org/packages/05/8b/76626c85314fa93a971a8a1fd2b8b5d2e29819511dca49ae79cc1d81bf6e/kmergenetyper-1.0.3.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.3
2023-05-30T10:35:06,479   Found link https://files.pythonhosted.org/packages/43/78/c63fbd748d8a0ebe0451ec683eb39c2402c05cf366bf298b352eaaf05378/kmergenetyper-1.0.4.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.4
2023-05-30T10:35:06,480   Found link https://files.pythonhosted.org/packages/91/e7/399c3dc59073bec9c6ee33ea6b3c6b12d1cc23e1393fa0cc6e2c53fe7937/kmergenetyper-1.0.5.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.5
2023-05-30T10:35:06,480   Found link https://files.pythonhosted.org/packages/f4/f9/8fe8e7c0cce978be0f000eaa3a1b9b9c49b3584a3913a2eec332a4146569/kmergenetyper-1.0.6.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.6
2023-05-30T10:35:06,481   Found link https://files.pythonhosted.org/packages/f1/44/d05bf03b067d18bc15e9e57a6e114b876418bb8c83be502c712cef3a958a/kmergenetyper-1.0.7.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.7
2023-05-30T10:35:06,482   Found link https://files.pythonhosted.org/packages/e3/e7/127c1d33013b6176bd975ec56c2793b2888b903479794639d464251ebf17/kmergenetyper-1.0.8.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.8
2023-05-30T10:35:06,482   Found link https://files.pythonhosted.org/packages/5d/ae/321fdf636e730e328a51851060905d6ad88481ecfc38352aafe0bb250ef7/kmergenetyper-1.0.9.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.9
2023-05-30T10:35:06,483   Found link https://files.pythonhosted.org/packages/55/85/e138b090fcfdc379c7e6e06291249c0d11c1fc68c7f841f61c0f7f57a2c7/kmergenetyper-1.0.10.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.10
2023-05-30T10:35:06,484   Found link https://files.pythonhosted.org/packages/51/c4/176bfaed5541263924c240d450b6bf5c81c4f1441901b47960ec21eaed7b/kmergenetyper-1.0.11.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.11
2023-05-30T10:35:06,484   Found link https://files.pythonhosted.org/packages/d0/51/c73da5eb63d32adf7dd6bcc811fc3862bd0d8e1cdac86aa0df8b775cf4e2/kmergenetyper-1.0.12.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.12
2023-05-30T10:35:06,485   Found link https://files.pythonhosted.org/packages/42/78/df8483c2da802b63762585695071bfafaee487fccce55b8a1f578c67129b/kmergenetyper-1.0.13.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.13
2023-05-30T10:35:06,486   Found link https://files.pythonhosted.org/packages/3f/23/7d74cddb379e944d4cbbf67f3c0a13d0cc95f56ab4a55ce30cd4a66a52dd/kmergenetyper-1.0.14.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.14
2023-05-30T10:35:06,486   Found link https://files.pythonhosted.org/packages/d2/08/8c7b265b349069d6e31a0e7dcff02504bf65e718bfe2caf9004322c39b37/kmergenetyper-1.0.15.tar.gz (from https://pypi.org/simple/kmergenetyper/), version: 1.0.15
2023-05-30T10:35:06,487 Fetching project page and analyzing links: https://www.piwheels.org/simple/kmergenetyper/
2023-05-30T10:35:06,488 Getting page https://www.piwheels.org/simple/kmergenetyper/
2023-05-30T10:35:06,490 Found index url https://www.piwheels.org/simple/
2023-05-30T10:35:06,719 Fetched page https://www.piwheels.org/simple/kmergenetyper/ as text/html
2023-05-30T10:35:06,731   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.14-py3-none-any.whl#sha256=3b2ab624826a59e5cca07414927ee52c0eda6d7c08260bed3659cddcd23fcfe2 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,732   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.13-py3-none-any.whl#sha256=341290b193c7afe7299d36a6f411ef417c2dd9f8efb458df58f5f9e00eb3eb0c (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,733   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.12-py3-none-any.whl#sha256=ed88ae39d918929cb04f7b35a1eaa4b44e8ba20766d066b207ea5467914de98f (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,733   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.11-py3-none-any.whl#sha256=d2ecf2fade1268e8e33fb44e3533dca334e9e36ff49c440f771ce7599520acc6 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,734   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.10-py3-none-any.whl#sha256=0db04840ee71fceaae2c473197c75fe0e9154b992a3a81b6782a021021ae09e6 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,734   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.9-py3-none-any.whl#sha256=40f073c81e4978a692271b72407989b00fc9f270d6f1e7aca670d8447780a87f (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,735   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.8-py3-none-any.whl#sha256=76cf8c5c5e4fbe86b1a27920802be0604fd45a6cc94cc96a92daae48225b7d98 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,735   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.7-py3-none-any.whl#sha256=bcc5f48a2e49e413f851d462683071f08e582ba2e79e4fea6566510c5a4b768a (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,736   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.6-py3-none-any.whl#sha256=ab143997e9a6010d7564b7eb332e30020e906dccb16109f80e7d9e7a4f7f522c (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,736   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.5-py3-none-any.whl#sha256=877e9f780151c571325541fd815a495ffc63a5d59a10bb71b900d649a52791b3 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,737   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.4-py3-none-any.whl#sha256=d48c366b8f5b9a584c25199de4ad637d9148de4f7e690cf89dbc99bc0bf3cd12 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,737   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.3-py3-none-any.whl#sha256=4da0dc59a822ade5f5437e73b699edf2efd0c1ced5911496db506d0f99f8c6fc (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,738   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.2-py3-none-any.whl#sha256=8647efa3afcd2812e0cddd6b46be8e62ba9cee51f8c364a62820efc5faf54b69 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,738   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.1-py3-none-any.whl#sha256=0ac6724b8b358e46144560e2fc69d753c7ebfa34243a55477bdb59221da645dd (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,739   Skipping link: No binaries permitted for kmergenetyper: https://www.piwheels.org/simple/kmergenetyper/kmergenetyper-1.0.0-py3-none-any.whl#sha256=f9349c95e0500e10963c0c41b8419305a344ceda1e21cd271ff2ac1b6e0652f6 (from https://www.piwheels.org/simple/kmergenetyper/)
2023-05-30T10:35:06,740 Skipping link: not a file: https://www.piwheels.org/simple/kmergenetyper/
2023-05-30T10:35:06,740 Skipping link: not a file: https://pypi.org/simple/kmergenetyper/
2023-05-30T10:35:06,778 Given no hashes to check 1 links for project 'kmergenetyper': discarding no candidates
2023-05-30T10:35:06,809 Collecting kmergenetyper==1.0.15
2023-05-30T10:35:06,814   Created temporary directory: /tmp/pip-unpack-uiez5djm
2023-05-30T10:35:06,984   Downloading kmergenetyper-1.0.15.tar.gz (8.1 kB)
2023-05-30T10:35:07,068   Added kmergenetyper==1.0.15 from https://files.pythonhosted.org/packages/d2/08/8c7b265b349069d6e31a0e7dcff02504bf65e718bfe2caf9004322c39b37/kmergenetyper-1.0.15.tar.gz to build tracker '/tmp/pip-build-tracker-6ssmhm_t'
2023-05-30T10:35:07,072   Running setup.py (path:/tmp/pip-wheel-2nuund_n/kmergenetyper_06b4a0b7c6cb47269b17406677868c32/setup.py) egg_info for package kmergenetyper
2023-05-30T10:35:07,073   Created temporary directory: /tmp/pip-pip-egg-info-oc3zw_nr
2023-05-30T10:35:07,074   Preparing metadata (setup.py): started
2023-05-30T10:35:07,076   Running command python setup.py egg_info
2023-05-30T10:35:08,564   running egg_info
2023-05-30T10:35:08,575   creating /tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info
2023-05-30T10:35:08,633   writing /tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info/PKG-INFO
2023-05-30T10:35:08,638   writing dependency_links to /tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info/dependency_links.txt
2023-05-30T10:35:08,644   writing top-level names to /tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info/top_level.txt
2023-05-30T10:35:08,647   writing manifest file '/tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info/SOURCES.txt'
2023-05-30T10:35:08,897   reading manifest file '/tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info/SOURCES.txt'
2023-05-30T10:35:08,901   adding license file 'LICENSE'
2023-05-30T10:35:08,907   writing manifest file '/tmp/pip-pip-egg-info-oc3zw_nr/kmergenetyper.egg-info/SOURCES.txt'
2023-05-30T10:35:09,027   Preparing metadata (setup.py): finished with status 'done'
2023-05-30T10:35:09,038   Source in /tmp/pip-wheel-2nuund_n/kmergenetyper_06b4a0b7c6cb47269b17406677868c32 has version 1.0.15, which satisfies requirement kmergenetyper==1.0.15 from https://files.pythonhosted.org/packages/d2/08/8c7b265b349069d6e31a0e7dcff02504bf65e718bfe2caf9004322c39b37/kmergenetyper-1.0.15.tar.gz
2023-05-30T10:35:09,040   Removed kmergenetyper==1.0.15 from https://files.pythonhosted.org/packages/d2/08/8c7b265b349069d6e31a0e7dcff02504bf65e718bfe2caf9004322c39b37/kmergenetyper-1.0.15.tar.gz from build tracker '/tmp/pip-build-tracker-6ssmhm_t'
2023-05-30T10:35:09,049 Created temporary directory: /tmp/pip-unpack-vrkbvg0m
2023-05-30T10:35:09,050 Building wheels for collected packages: kmergenetyper
2023-05-30T10:35:09,059   Created temporary directory: /tmp/pip-wheel-nt3_ta46
2023-05-30T10:35:09,060   Building wheel for kmergenetyper (setup.py): started
2023-05-30T10:35:09,062   Destination directory: /tmp/pip-wheel-nt3_ta46
2023-05-30T10:35:09,063   Running command python setup.py bdist_wheel
2023-05-30T10:35:11,002   running bdist_wheel
2023-05-30T10:35:11,181   running build
2023-05-30T10:35:11,182   running build_py
2023-05-30T10:35:11,247   creating build
2023-05-30T10:35:11,247   creating build/lib
2023-05-30T10:35:11,249   creating build/lib/kmergenetyper
2023-05-30T10:35:11,251   copying kmergenetyper/version.py -> build/lib/kmergenetyper
2023-05-30T10:35:11,255   copying kmergenetyper/realignConsensus.py -> build/lib/kmergenetyper
2023-05-30T10:35:11,259   copying kmergenetyper/kma.py -> build/lib/kmergenetyper
2023-05-30T10:35:11,262   copying kmergenetyper/__init__.py -> build/lib/kmergenetyper
2023-05-30T10:35:11,265   copying kmergenetyper/typeGenes.py -> build/lib/kmergenetyper
2023-05-30T10:35:11,267   running egg_info
2023-05-30T10:35:11,412   writing kmergenetyper.egg-info/PKG-INFO
2023-05-30T10:35:11,415   writing dependency_links to kmergenetyper.egg-info/dependency_links.txt
2023-05-30T10:35:11,420   writing top-level names to kmergenetyper.egg-info/top_level.txt
2023-05-30T10:35:11,484   reading manifest file 'kmergenetyper.egg-info/SOURCES.txt'
2023-05-30T10:35:11,488   adding license file 'LICENSE'
2023-05-30T10:35:11,493   writing manifest file 'kmergenetyper.egg-info/SOURCES.txt'
2023-05-30T10:35:11,498   running build_scripts
2023-05-30T10:35:11,499   creating build/scripts-3.7
2023-05-30T10:35:11,501   copying and adjusting bin/kmergenetyper -> build/scripts-3.7
2023-05-30T10:35:11,503   changing mode of build/scripts-3.7/kmergenetyper from 644 to 755
2023-05-30T10:35:11,572   /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-05-30T10:35:11,573   !!

2023-05-30T10:35:11,573           ********************************************************************************
2023-05-30T10:35:11,574           Please avoid running ``setup.py`` directly.
2023-05-30T10:35:11,574           Instead, use pypa/build, pypa/installer, pypa/build or
2023-05-30T10:35:11,574           other standards-based tools.

2023-05-30T10:35:11,575           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-05-30T10:35:11,575           ********************************************************************************

2023-05-30T10:35:11,576   !!
2023-05-30T10:35:11,576     self.initialize_options()
2023-05-30T10:35:11,634   installing to build/bdist.linux-armv7l/wheel
2023-05-30T10:35:11,634   running install
2023-05-30T10:35:11,695   running install_lib
2023-05-30T10:35:11,769   creating build/bdist.linux-armv7l
2023-05-30T10:35:11,770   creating build/bdist.linux-armv7l/wheel
2023-05-30T10:35:11,775   creating build/bdist.linux-armv7l/wheel/kmergenetyper
2023-05-30T10:35:11,778   copying build/lib/kmergenetyper/version.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-05-30T10:35:11,782   copying build/lib/kmergenetyper/realignConsensus.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-05-30T10:35:11,787   copying build/lib/kmergenetyper/kma.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-05-30T10:35:11,791   copying build/lib/kmergenetyper/__init__.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-05-30T10:35:11,794   copying build/lib/kmergenetyper/typeGenes.py -> build/bdist.linux-armv7l/wheel/kmergenetyper
2023-05-30T10:35:11,798   running install_egg_info
2023-05-30T10:35:11,876   Copying kmergenetyper.egg-info to build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.15-py3.7.egg-info
2023-05-30T10:35:11,893   running install_scripts
2023-05-30T10:35:11,895   creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.15.data
2023-05-30T10:35:11,896   creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.15.data/scripts
2023-05-30T10:35:11,899   copying build/scripts-3.7/kmergenetyper -> build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.15.data/scripts
2023-05-30T10:35:11,902   changing mode of build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.15.data/scripts/kmergenetyper to 755
2023-05-30T10:35:11,927   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2023-05-30T10:35:11,936   creating build/bdist.linux-armv7l/wheel/kmergenetyper-1.0.15.dist-info/WHEEL
2023-05-30T10:35:11,941   creating '/tmp/pip-wheel-nt3_ta46/kmergenetyper-1.0.15-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-05-30T10:35:11,946   adding 'kmergenetyper/__init__.py'
2023-05-30T10:35:11,949   adding 'kmergenetyper/kma.py'
2023-05-30T10:35:11,953   adding 'kmergenetyper/realignConsensus.py'
2023-05-30T10:35:11,955   adding 'kmergenetyper/typeGenes.py'
2023-05-30T10:35:11,958   adding 'kmergenetyper/version.py'
2023-05-30T10:35:11,962   adding 'kmergenetyper-1.0.15.data/scripts/kmergenetyper'
2023-05-30T10:35:11,969   adding 'kmergenetyper-1.0.15.dist-info/LICENSE'
2023-05-30T10:35:11,972   adding 'kmergenetyper-1.0.15.dist-info/METADATA'
2023-05-30T10:35:11,974   adding 'kmergenetyper-1.0.15.dist-info/WHEEL'
2023-05-30T10:35:11,976   adding 'kmergenetyper-1.0.15.dist-info/top_level.txt'
2023-05-30T10:35:11,977   adding 'kmergenetyper-1.0.15.dist-info/RECORD'
2023-05-30T10:35:11,979   removing build/bdist.linux-armv7l/wheel
2023-05-30T10:35:12,138   Building wheel for kmergenetyper (setup.py): finished with status 'done'
2023-05-30T10:35:12,145   Created wheel for kmergenetyper: filename=kmergenetyper-1.0.15-py3-none-any.whl size=9482 sha256=67a751289471ce868245874a7f4fd154e023031bcd853bb85c8e4a7ae5cbd69a
2023-05-30T10:35:12,148   Stored in directory: /tmp/pip-ephem-wheel-cache-zrrs9jub/wheels/97/90/1a/d0dc0883669b5ec47b88d2f5d3f850dbb41abfdbc0b9eba393
2023-05-30T10:35:12,174 Successfully built kmergenetyper
2023-05-30T10:35:12,181 Removed build tracker: '/tmp/pip-build-tracker-6ssmhm_t'