2023-06-02T05:13:26,381 Created temporary directory: /tmp/pip-build-tracker-cendgmpf 2023-06-02T05:13:26,383 Initialized build tracking at /tmp/pip-build-tracker-cendgmpf 2023-06-02T05:13:26,383 Created build tracker: /tmp/pip-build-tracker-cendgmpf 2023-06-02T05:13:26,383 Entered build tracker: /tmp/pip-build-tracker-cendgmpf 2023-06-02T05:13:26,383 Created temporary directory: /tmp/pip-wheel-dumklyu_ 2023-06-02T05:13:26,387 Created temporary directory: /tmp/pip-ephem-wheel-cache-w76583go 2023-06-02T05:13:26,411 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-02T05:13:26,415 2 location(s) to search for versions of funid: 2023-06-02T05:13:26,415 * https://pypi.org/simple/funid/ 2023-06-02T05:13:26,415 * https://www.piwheels.org/simple/funid/ 2023-06-02T05:13:26,415 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2023-06-02T05:13:26,415 Getting page https://pypi.org/simple/funid/ 2023-06-02T05:13:26,417 Found index url https://pypi.org/simple/ 2023-06-02T05:13:26,466 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2023-06-02T05:13:26,471 Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0 2023-06-02T05:13:26,472 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,472 Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2 2023-06-02T05:13:26,473 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,473 Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1 2023-06-02T05:13:26,474 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,474 Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0 2023-06-02T05:13:26,475 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,475 Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1 2023-06-02T05:13:26,475 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,476 Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4 2023-06-02T05:13:26,476 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,477 Found link https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.5 2023-06-02T05:13:26,477 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/b7/27/c64985b174cbfa662e2109d838292a69d1669ad6a3a36294ee03ce81ef2a/FunID-0.3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,478 Found link https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.6.1 2023-06-02T05:13:26,478 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/1f/44/739693947517bbc2e128df01ee142d72ee3358f7cc7daba4a3759fbf34bd/FunID-0.3.7-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,479 Found link https://files.pythonhosted.org/packages/a2/14/7ae571dd6e4b918e2a85ca1625481c5764c15f2f4ecebb64e738e4863c57/FunID-0.3.7.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.7 2023-06-02T05:13:26,479 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/89/e3/e48669d0fdeafd9b79bcd3b601ed05547df828c6f5a3cd0d733e28289738/FunID-0.3.8-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,479 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f4/45/d1bc4761848b0f4ece4dc47311a91a7e85668eb49b3bbc86843e4508dbc1/FunID-0.3.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,480 Found link https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.1 2023-06-02T05:13:26,480 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f9/05/5a5739948741051441923681ab8f41aeb24b4b67aee087e3911831cd397a/FunID-0.3.8.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,481 Found link https://files.pythonhosted.org/packages/4a/4a/3bf498c2707726c16177fb6d5e4c1fb6b942aa0f857378f22345cee709b9/FunID-0.3.8.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.2 2023-06-02T05:13:26,481 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/51/ac/f8561c5c3715309d959188f62cef662154c247362fa548893dda38582f08/FunID-0.3.9-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,482 Found link https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.9 2023-06-02T05:13:26,482 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2023-06-02T05:13:26,482 Getting page https://www.piwheels.org/simple/funid/ 2023-06-02T05:13:26,483 Found index url https://www.piwheels.org/simple/ 2023-06-02T05:13:26,657 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2023-06-02T05:13:26,661 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.8.2-py3-none-any.whl#sha256=06eb041030a5d98c5317f93863fa0bafdb3bac2e3225487b61109016d3ae8b89 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,661 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.8.1-py3-none-any.whl#sha256=e084fdf424ae421530d153e56c4a7a15849d59762617b101ba672265e1f83ae2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,662 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.7-py3-none-any.whl#sha256=696cfcf7f361ec4e0dd269ac3c0b30051c83fb75dd92ee7b8b0813f1b6c71f6c (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,662 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.6.1-py3-none-any.whl#sha256=9eddeab3cb03eb693bd4e1e231ab1076caa820fd6db88ef6c584b309cf87af4b (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,662 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.5-py3-none-any.whl#sha256=010daca223b2f36ea9811ebd48eb1afa57c9a0ac2f3a3f84f9b86603107db381 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,662 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.4-py3-none-any.whl#sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,662 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,663 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,663 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-02T05:13:26,663 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,663 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-02T05:13:26,663 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2023-06-02T05:13:26,664 Skipping link: not a file: https://pypi.org/simple/funid/ 2023-06-02T05:13:26,682 Given no hashes to check 1 links for project 'funid': discarding no candidates 2023-06-02T05:13:26,699 Collecting funid==0.3.9 2023-06-02T05:13:26,701 Created temporary directory: /tmp/pip-unpack-ivw0n6cd 2023-06-02T05:13:26,853 Downloading FunID-0.3.9.tar.gz (51.5 MB) 2023-06-02T05:13:40,070 Added funid==0.3.9 from https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz to build tracker '/tmp/pip-build-tracker-cendgmpf' 2023-06-02T05:13:40,072 Running setup.py (path:/tmp/pip-wheel-dumklyu_/funid_1238e6bd8a494e1680d6c083c536584d/setup.py) egg_info for package funid 2023-06-02T05:13:40,073 Created temporary directory: /tmp/pip-pip-egg-info-5tkn4li7 2023-06-02T05:13:40,073 Preparing metadata (setup.py): started 2023-06-02T05:13:40,074 Running command python setup.py egg_info 2023-06-02T05:13:40,676 {'name': 'FunID', 'version': '0.3.9', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-06-02T05:13:40,677 running egg_info 2023-06-02T05:13:40,678 creating /tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info 2023-06-02T05:13:40,702 writing /tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/PKG-INFO 2023-06-02T05:13:40,705 writing dependency_links to /tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/dependency_links.txt 2023-06-02T05:13:40,706 writing entry points to /tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/entry_points.txt 2023-06-02T05:13:40,708 writing requirements to /tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/requires.txt 2023-06-02T05:13:40,709 writing top-level names to /tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/top_level.txt 2023-06-02T05:13:40,710 writing manifest file '/tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/SOURCES.txt' 2023-06-02T05:13:40,800 reading manifest file '/tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/SOURCES.txt' 2023-06-02T05:13:40,802 adding license file 'LICENSE' 2023-06-02T05:13:40,805 writing manifest file '/tmp/pip-pip-egg-info-5tkn4li7/FunID.egg-info/SOURCES.txt' 2023-06-02T05:13:40,864 Preparing metadata (setup.py): finished with status 'done' 2023-06-02T05:13:40,869 Source in /tmp/pip-wheel-dumklyu_/funid_1238e6bd8a494e1680d6c083c536584d has version 0.3.9, which satisfies requirement funid==0.3.9 from https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz 2023-06-02T05:13:40,870 Removed funid==0.3.9 from https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz from build tracker '/tmp/pip-build-tracker-cendgmpf' 2023-06-02T05:13:40,877 Created temporary directory: /tmp/pip-unpack-f_3gkt3t 2023-06-02T05:13:40,877 Building wheels for collected packages: funid 2023-06-02T05:13:40,881 Created temporary directory: /tmp/pip-wheel-zmq8fa8m 2023-06-02T05:13:40,882 Building wheel for funid (setup.py): started 2023-06-02T05:13:40,883 Destination directory: /tmp/pip-wheel-zmq8fa8m 2023-06-02T05:13:40,883 Running command python setup.py bdist_wheel 2023-06-02T05:13:41,309 {'name': 'FunID', 'version': '0.3.9', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'PyQt5>=5.9.2', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-06-02T05:13:41,697 running bdist_wheel 2023-06-02T05:13:41,989 running build 2023-06-02T05:13:41,989 running build_py 2023-06-02T05:13:42,017 creating build 2023-06-02T05:13:42,017 creating build/lib 2023-06-02T05:13:42,018 creating build/lib/funid 2023-06-02T05:13:42,019 copying funid/FunID_GUI.py -> build/lib/funid 2023-06-02T05:13:42,022 copying funid/main.py -> build/lib/funid 2023-06-02T05:13:42,025 copying funid/__init__.py -> build/lib/funid 2023-06-02T05:13:42,027 creating build/lib/funid/src 2023-06-02T05:13:42,028 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2023-06-02T05:13:42,032 copying funid/src/cluster.py -> build/lib/funid/src 2023-06-02T05:13:42,034 copying funid/src/search.py -> build/lib/funid/src 2023-06-02T05:13:42,037 copying funid/src/logger.py -> build/lib/funid/src 2023-06-02T05:13:42,038 copying funid/src/modeltest.py -> build/lib/funid/src 2023-06-02T05:13:42,040 copying funid/src/hasher.py -> build/lib/funid/src 2023-06-02T05:13:42,042 copying funid/src/save.py -> build/lib/funid/src 2023-06-02T05:13:42,044 copying funid/src/validate_option.py -> build/lib/funid/src 2023-06-02T05:13:42,048 copying funid/src/ncbi.py -> build/lib/funid/src 2023-06-02T05:13:42,050 copying funid/src/logics.py -> build/lib/funid/src 2023-06-02T05:13:42,052 copying funid/src/initialize.py -> build/lib/funid/src 2023-06-02T05:13:42,054 copying funid/src/patch.py -> build/lib/funid/src 2023-06-02T05:13:42,056 copying funid/src/command.py -> build/lib/funid/src 2023-06-02T05:13:42,059 copying funid/src/concatenate.py -> build/lib/funid/src 2023-06-02T05:13:42,061 copying funid/src/tree.py -> build/lib/funid/src 2023-06-02T05:13:42,063 copying funid/src/ext.py -> build/lib/funid/src 2023-06-02T05:13:42,065 copying funid/src/__init__.py -> build/lib/funid/src 2023-06-02T05:13:42,067 copying funid/src/tool.py -> build/lib/funid/src 2023-06-02T05:13:42,069 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2023-06-02T05:13:42,072 copying funid/src/opt_generator.py -> build/lib/funid/src 2023-06-02T05:13:42,074 copying funid/src/align.py -> build/lib/funid/src 2023-06-02T05:13:42,075 copying funid/src/reporter.py -> build/lib/funid/src 2023-06-02T05:13:42,079 copying funid/src/validation.py -> build/lib/funid/src 2023-06-02T05:13:42,080 copying funid/src/trim.py -> build/lib/funid/src 2023-06-02T05:13:42,082 copying funid/src/manage_input.py -> build/lib/funid/src 2023-06-02T05:13:42,084 copying funid/src/dataset.py -> build/lib/funid/src 2023-06-02T05:13:42,087 creating build/lib/funid/data 2023-06-02T05:13:42,088 copying funid/data/__init__.py -> build/lib/funid/data 2023-06-02T05:13:42,090 running egg_info 2023-06-02T05:13:42,149 writing FunID.egg-info/PKG-INFO 2023-06-02T05:13:42,151 writing dependency_links to FunID.egg-info/dependency_links.txt 2023-06-02T05:13:42,153 writing entry points to FunID.egg-info/entry_points.txt 2023-06-02T05:13:42,154 writing requirements to FunID.egg-info/requires.txt 2023-06-02T05:13:42,155 writing top-level names to FunID.egg-info/top_level.txt 2023-06-02T05:13:42,191 reading manifest file 'FunID.egg-info/SOURCES.txt' 2023-06-02T05:13:42,200 adding license file 'LICENSE' 2023-06-02T05:13:42,208 writing manifest file 'FunID.egg-info/SOURCES.txt' 2023-06-02T05:13:42,211 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external' is absent from the `packages` configuration. 2023-06-02T05:13:42,211 !! 2023-06-02T05:13:42,211 ******************************************************************************** 2023-06-02T05:13:42,211 ############################ 2023-06-02T05:13:42,212 # Package would be ignored # 2023-06-02T05:13:42,212 ############################ 2023-06-02T05:13:42,212 Python recognizes 'funid.external' as an importable package[^1], 2023-06-02T05:13:42,212 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,212 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,212 package, please make sure that 'funid.external' is explicitly added 2023-06-02T05:13:42,212 to the `packages` configuration field. 2023-06-02T05:13:42,213 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,213 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,213 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,213 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,213 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,214 If you don't want 'funid.external' to be distributed and are 2023-06-02T05:13:42,214 already explicitly excluding 'funid.external' via 2023-06-02T05:13:42,214 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,214 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,214 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,214 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,214 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,215 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,215 even if it does not contain any `.py` files. 2023-06-02T05:13:42,215 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,215 directory, all directories are treated like packages. 2023-06-02T05:13:42,215 ******************************************************************************** 2023-06-02T05:13:42,215 !! 2023-06-02T05:13:42,216 check.warn(importable) 2023-06-02T05:13:42,216 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows' is absent from the `packages` configuration. 2023-06-02T05:13:42,216 !! 2023-06-02T05:13:42,216 ******************************************************************************** 2023-06-02T05:13:42,216 ############################ 2023-06-02T05:13:42,216 # Package would be ignored # 2023-06-02T05:13:42,217 ############################ 2023-06-02T05:13:42,217 Python recognizes 'funid.external.BLAST_Windows' as an importable package[^1], 2023-06-02T05:13:42,217 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,217 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,217 package, please make sure that 'funid.external.BLAST_Windows' is explicitly added 2023-06-02T05:13:42,217 to the `packages` configuration field. 2023-06-02T05:13:42,217 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,218 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,218 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,218 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,218 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,218 If you don't want 'funid.external.BLAST_Windows' to be distributed and are 2023-06-02T05:13:42,218 already explicitly excluding 'funid.external.BLAST_Windows' via 2023-06-02T05:13:42,219 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,219 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,219 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,219 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,219 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,220 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,220 even if it does not contain any `.py` files. 2023-06-02T05:13:42,220 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,220 directory, all directories are treated like packages. 2023-06-02T05:13:42,220 ******************************************************************************** 2023-06-02T05:13:42,220 !! 2023-06-02T05:13:42,220 check.warn(importable) 2023-06-02T05:13:42,220 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.bin' is absent from the `packages` configuration. 2023-06-02T05:13:42,221 !! 2023-06-02T05:13:42,221 ******************************************************************************** 2023-06-02T05:13:42,221 ############################ 2023-06-02T05:13:42,221 # Package would be ignored # 2023-06-02T05:13:42,221 ############################ 2023-06-02T05:13:42,221 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package[^1], 2023-06-02T05:13:42,221 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,222 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,222 package, please make sure that 'funid.external.BLAST_Windows.bin' is explicitly added 2023-06-02T05:13:42,222 to the `packages` configuration field. 2023-06-02T05:13:42,222 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,222 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,222 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,223 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,223 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,223 If you don't want 'funid.external.BLAST_Windows.bin' to be distributed and are 2023-06-02T05:13:42,223 already explicitly excluding 'funid.external.BLAST_Windows.bin' via 2023-06-02T05:13:42,223 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,223 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,223 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,224 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,224 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,224 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,224 even if it does not contain any `.py` files. 2023-06-02T05:13:42,224 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,225 directory, all directories are treated like packages. 2023-06-02T05:13:42,225 ******************************************************************************** 2023-06-02T05:13:42,225 !! 2023-06-02T05:13:42,225 check.warn(importable) 2023-06-02T05:13:42,225 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.doc' is absent from the `packages` configuration. 2023-06-02T05:13:42,225 !! 2023-06-02T05:13:42,225 ******************************************************************************** 2023-06-02T05:13:42,226 ############################ 2023-06-02T05:13:42,226 # Package would be ignored # 2023-06-02T05:13:42,226 ############################ 2023-06-02T05:13:42,226 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package[^1], 2023-06-02T05:13:42,226 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,226 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,226 package, please make sure that 'funid.external.BLAST_Windows.doc' is explicitly added 2023-06-02T05:13:42,227 to the `packages` configuration field. 2023-06-02T05:13:42,227 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,227 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,227 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,227 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,227 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,228 If you don't want 'funid.external.BLAST_Windows.doc' to be distributed and are 2023-06-02T05:13:42,228 already explicitly excluding 'funid.external.BLAST_Windows.doc' via 2023-06-02T05:13:42,228 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,228 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,228 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,228 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,228 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,229 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,229 even if it does not contain any `.py` files. 2023-06-02T05:13:42,229 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,229 directory, all directories are treated like packages. 2023-06-02T05:13:42,229 ******************************************************************************** 2023-06-02T05:13:42,229 !! 2023-06-02T05:13:42,230 check.warn(importable) 2023-06-02T05:13:42,230 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.FastTree_Windows' is absent from the `packages` configuration. 2023-06-02T05:13:42,230 !! 2023-06-02T05:13:42,230 ******************************************************************************** 2023-06-02T05:13:42,230 ############################ 2023-06-02T05:13:42,230 # Package would be ignored # 2023-06-02T05:13:42,230 ############################ 2023-06-02T05:13:42,230 Python recognizes 'funid.external.FastTree_Windows' as an importable package[^1], 2023-06-02T05:13:42,231 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,231 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,231 package, please make sure that 'funid.external.FastTree_Windows' is explicitly added 2023-06-02T05:13:42,231 to the `packages` configuration field. 2023-06-02T05:13:42,231 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,231 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,231 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,232 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,232 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,232 If you don't want 'funid.external.FastTree_Windows' to be distributed and are 2023-06-02T05:13:42,232 already explicitly excluding 'funid.external.FastTree_Windows' via 2023-06-02T05:13:42,232 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,232 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,233 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,233 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,233 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,233 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,233 even if it does not contain any `.py` files. 2023-06-02T05:13:42,234 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,234 directory, all directories are treated like packages. 2023-06-02T05:13:42,234 ******************************************************************************** 2023-06-02T05:13:42,234 !! 2023-06-02T05:13:42,234 check.warn(importable) 2023-06-02T05:13:42,234 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.RAxML_Windows' is absent from the `packages` configuration. 2023-06-02T05:13:42,235 !! 2023-06-02T05:13:42,235 ******************************************************************************** 2023-06-02T05:13:42,235 ############################ 2023-06-02T05:13:42,235 # Package would be ignored # 2023-06-02T05:13:42,235 ############################ 2023-06-02T05:13:42,235 Python recognizes 'funid.external.RAxML_Windows' as an importable package[^1], 2023-06-02T05:13:42,236 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,236 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,236 package, please make sure that 'funid.external.RAxML_Windows' is explicitly added 2023-06-02T05:13:42,236 to the `packages` configuration field. 2023-06-02T05:13:42,236 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,236 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,237 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,237 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,237 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,237 If you don't want 'funid.external.RAxML_Windows' to be distributed and are 2023-06-02T05:13:42,238 already explicitly excluding 'funid.external.RAxML_Windows' via 2023-06-02T05:13:42,238 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,238 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,238 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,238 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,238 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,239 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,239 even if it does not contain any `.py` files. 2023-06-02T05:13:42,239 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,239 directory, all directories are treated like packages. 2023-06-02T05:13:42,239 ******************************************************************************** 2023-06-02T05:13:42,240 !! 2023-06-02T05:13:42,240 check.warn(importable) 2023-06-02T05:13:42,240 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows' is absent from the `packages` configuration. 2023-06-02T05:13:42,240 !! 2023-06-02T05:13:42,240 ******************************************************************************** 2023-06-02T05:13:42,240 ############################ 2023-06-02T05:13:42,240 # Package would be ignored # 2023-06-02T05:13:42,241 ############################ 2023-06-02T05:13:42,241 Python recognizes 'funid.external.mmseqs_Windows' as an importable package[^1], 2023-06-02T05:13:42,241 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,241 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,241 package, please make sure that 'funid.external.mmseqs_Windows' is explicitly added 2023-06-02T05:13:42,241 to the `packages` configuration field. 2023-06-02T05:13:42,242 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,242 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,242 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,242 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,243 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,243 If you don't want 'funid.external.mmseqs_Windows' to be distributed and are 2023-06-02T05:13:42,243 already explicitly excluding 'funid.external.mmseqs_Windows' via 2023-06-02T05:13:42,243 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,243 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,244 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,244 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,244 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,244 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,245 even if it does not contain any `.py` files. 2023-06-02T05:13:42,245 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,245 directory, all directories are treated like packages. 2023-06-02T05:13:42,245 ******************************************************************************** 2023-06-02T05:13:42,245 !! 2023-06-02T05:13:42,245 check.warn(importable) 2023-06-02T05:13:42,245 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.bin' is absent from the `packages` configuration. 2023-06-02T05:13:42,246 !! 2023-06-02T05:13:42,246 ******************************************************************************** 2023-06-02T05:13:42,246 ############################ 2023-06-02T05:13:42,246 # Package would be ignored # 2023-06-02T05:13:42,246 ############################ 2023-06-02T05:13:42,246 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package[^1], 2023-06-02T05:13:42,246 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,247 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,247 package, please make sure that 'funid.external.mmseqs_Windows.bin' is explicitly added 2023-06-02T05:13:42,247 to the `packages` configuration field. 2023-06-02T05:13:42,247 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,247 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,247 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,248 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,248 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,248 If you don't want 'funid.external.mmseqs_Windows.bin' to be distributed and are 2023-06-02T05:13:42,248 already explicitly excluding 'funid.external.mmseqs_Windows.bin' via 2023-06-02T05:13:42,248 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,248 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,248 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,249 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,249 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,249 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,249 even if it does not contain any `.py` files. 2023-06-02T05:13:42,249 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,250 directory, all directories are treated like packages. 2023-06-02T05:13:42,250 ******************************************************************************** 2023-06-02T05:13:42,250 !! 2023-06-02T05:13:42,250 check.warn(importable) 2023-06-02T05:13:42,250 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.examples' is absent from the `packages` configuration. 2023-06-02T05:13:42,250 !! 2023-06-02T05:13:42,250 ******************************************************************************** 2023-06-02T05:13:42,251 ############################ 2023-06-02T05:13:42,251 # Package would be ignored # 2023-06-02T05:13:42,251 ############################ 2023-06-02T05:13:42,251 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package[^1], 2023-06-02T05:13:42,251 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,251 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,251 package, please make sure that 'funid.external.mmseqs_Windows.examples' is explicitly added 2023-06-02T05:13:42,252 to the `packages` configuration field. 2023-06-02T05:13:42,252 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,252 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,252 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,252 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,253 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,253 If you don't want 'funid.external.mmseqs_Windows.examples' to be distributed and are 2023-06-02T05:13:42,253 already explicitly excluding 'funid.external.mmseqs_Windows.examples' via 2023-06-02T05:13:42,253 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,253 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,253 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,254 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,254 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,254 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,254 even if it does not contain any `.py` files. 2023-06-02T05:13:42,254 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,254 directory, all directories are treated like packages. 2023-06-02T05:13:42,255 ******************************************************************************** 2023-06-02T05:13:42,255 !! 2023-06-02T05:13:42,255 check.warn(importable) 2023-06-02T05:13:42,255 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.matrices' is absent from the `packages` configuration. 2023-06-02T05:13:42,255 !! 2023-06-02T05:13:42,255 ******************************************************************************** 2023-06-02T05:13:42,256 ############################ 2023-06-02T05:13:42,256 # Package would be ignored # 2023-06-02T05:13:42,256 ############################ 2023-06-02T05:13:42,256 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package[^1], 2023-06-02T05:13:42,256 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,256 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,256 package, please make sure that 'funid.external.mmseqs_Windows.matrices' is explicitly added 2023-06-02T05:13:42,256 to the `packages` configuration field. 2023-06-02T05:13:42,257 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,257 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,257 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,257 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,257 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,258 If you don't want 'funid.external.mmseqs_Windows.matrices' to be distributed and are 2023-06-02T05:13:42,258 already explicitly excluding 'funid.external.mmseqs_Windows.matrices' via 2023-06-02T05:13:42,258 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,258 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,258 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,258 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,259 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,259 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,259 even if it does not contain any `.py` files. 2023-06-02T05:13:42,259 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,259 directory, all directories are treated like packages. 2023-06-02T05:13:42,259 ******************************************************************************** 2023-06-02T05:13:42,260 !! 2023-06-02T05:13:42,260 check.warn(importable) 2023-06-02T05:13:42,260 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.util' is absent from the `packages` configuration. 2023-06-02T05:13:42,260 !! 2023-06-02T05:13:42,260 ******************************************************************************** 2023-06-02T05:13:42,260 ############################ 2023-06-02T05:13:42,260 # Package would be ignored # 2023-06-02T05:13:42,261 ############################ 2023-06-02T05:13:42,261 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package[^1], 2023-06-02T05:13:42,261 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,261 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,261 package, please make sure that 'funid.external.mmseqs_Windows.util' is explicitly added 2023-06-02T05:13:42,261 to the `packages` configuration field. 2023-06-02T05:13:42,262 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,262 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,262 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,262 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,262 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,262 If you don't want 'funid.external.mmseqs_Windows.util' to be distributed and are 2023-06-02T05:13:42,263 already explicitly excluding 'funid.external.mmseqs_Windows.util' via 2023-06-02T05:13:42,263 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,263 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,263 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,263 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,263 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,264 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,264 even if it does not contain any `.py` files. 2023-06-02T05:13:42,264 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,264 directory, all directories are treated like packages. 2023-06-02T05:13:42,264 ******************************************************************************** 2023-06-02T05:13:42,264 !! 2023-06-02T05:13:42,265 check.warn(importable) 2023-06-02T05:13:42,265 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium' is absent from the `packages` configuration. 2023-06-02T05:13:42,265 !! 2023-06-02T05:13:42,265 ******************************************************************************** 2023-06-02T05:13:42,265 ############################ 2023-06-02T05:13:42,265 # Package would be ignored # 2023-06-02T05:13:42,265 ############################ 2023-06-02T05:13:42,266 Python recognizes 'funid.test_dataset.penicillium' as an importable package[^1], 2023-06-02T05:13:42,266 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,266 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,266 package, please make sure that 'funid.test_dataset.penicillium' is explicitly added 2023-06-02T05:13:42,266 to the `packages` configuration field. 2023-06-02T05:13:42,266 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,266 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,267 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,267 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,267 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,267 If you don't want 'funid.test_dataset.penicillium' to be distributed and are 2023-06-02T05:13:42,267 already explicitly excluding 'funid.test_dataset.penicillium' via 2023-06-02T05:13:42,267 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,268 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,268 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,268 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,268 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,268 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,269 even if it does not contain any `.py` files. 2023-06-02T05:13:42,269 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,269 directory, all directories are treated like packages. 2023-06-02T05:13:42,269 ******************************************************************************** 2023-06-02T05:13:42,269 !! 2023-06-02T05:13:42,269 check.warn(importable) 2023-06-02T05:13:42,269 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.DB' is absent from the `packages` configuration. 2023-06-02T05:13:42,270 !! 2023-06-02T05:13:42,270 ******************************************************************************** 2023-06-02T05:13:42,270 ############################ 2023-06-02T05:13:42,270 # Package would be ignored # 2023-06-02T05:13:42,270 ############################ 2023-06-02T05:13:42,270 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package[^1], 2023-06-02T05:13:42,270 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,271 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,271 package, please make sure that 'funid.test_dataset.penicillium.DB' is explicitly added 2023-06-02T05:13:42,271 to the `packages` configuration field. 2023-06-02T05:13:42,271 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,271 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,271 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,272 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,272 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,272 If you don't want 'funid.test_dataset.penicillium.DB' to be distributed and are 2023-06-02T05:13:42,272 already explicitly excluding 'funid.test_dataset.penicillium.DB' via 2023-06-02T05:13:42,272 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,273 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,273 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,273 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,273 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,273 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,274 even if it does not contain any `.py` files. 2023-06-02T05:13:42,274 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,274 directory, all directories are treated like packages. 2023-06-02T05:13:42,274 ******************************************************************************** 2023-06-02T05:13:42,274 !! 2023-06-02T05:13:42,274 check.warn(importable) 2023-06-02T05:13:42,274 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.Query' is absent from the `packages` configuration. 2023-06-02T05:13:42,275 !! 2023-06-02T05:13:42,275 ******************************************************************************** 2023-06-02T05:13:42,275 ############################ 2023-06-02T05:13:42,275 # Package would be ignored # 2023-06-02T05:13:42,275 ############################ 2023-06-02T05:13:42,275 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package[^1], 2023-06-02T05:13:42,275 but it is absent from setuptools' `packages` configuration. 2023-06-02T05:13:42,276 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-02T05:13:42,276 package, please make sure that 'funid.test_dataset.penicillium.Query' is explicitly added 2023-06-02T05:13:42,276 to the `packages` configuration field. 2023-06-02T05:13:42,276 Alternatively, you can also rely on setuptools' discovery methods 2023-06-02T05:13:42,276 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-02T05:13:42,276 instead of `find_packages(...)`/`find:`). 2023-06-02T05:13:42,276 You can read more about "package discovery" on setuptools documentation page: 2023-06-02T05:13:42,277 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-02T05:13:42,277 If you don't want 'funid.test_dataset.penicillium.Query' to be distributed and are 2023-06-02T05:13:42,277 already explicitly excluding 'funid.test_dataset.penicillium.Query' via 2023-06-02T05:13:42,277 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-02T05:13:42,277 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-02T05:13:42,277 combination with a more fine grained `package-data` configuration. 2023-06-02T05:13:42,278 You can read more about "package data files" on setuptools documentation page: 2023-06-02T05:13:42,278 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-02T05:13:42,278 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-02T05:13:42,278 even if it does not contain any `.py` files. 2023-06-02T05:13:42,278 On the other hand, currently there is no concept of package data 2023-06-02T05:13:42,279 directory, all directories are treated like packages. 2023-06-02T05:13:42,279 ******************************************************************************** 2023-06-02T05:13:42,279 !! 2023-06-02T05:13:42,279 check.warn(importable) 2023-06-02T05:13:42,279 creating build/lib/funid/external 2023-06-02T05:13:42,279 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2023-06-02T05:13:42,279 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2023-06-02T05:13:42,619 copying funid/external/__init__.py -> build/lib/funid/external 2023-06-02T05:13:42,621 creating build/lib/funid/external/BLAST_Windows 2023-06-02T05:13:42,622 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2023-06-02T05:13:42,625 creating build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:42,626 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:42,869 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:42,872 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:42,875 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:42,878 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:43,053 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:43,058 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-06-02T05:13:43,060 creating build/lib/funid/external/BLAST_Windows/doc 2023-06-02T05:13:43,061 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2023-06-02T05:13:43,063 creating build/lib/funid/external/FastTree_Windows 2023-06-02T05:13:43,064 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2023-06-02T05:13:43,071 creating build/lib/funid/external/Gblocks_Windows_0.91b 2023-06-02T05:13:43,071 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:43,072 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:43,078 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:43,080 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:43,083 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-02T05:13:43,083 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-02T05:13:43,087 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:43,088 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:43,090 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:43,093 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:43,095 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:43,097 creating build/lib/funid/external/RAxML_Windows 2023-06-02T05:13:43,098 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2023-06-02T05:13:43,101 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2023-06-02T05:13:43,103 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-06-02T05:13:43,128 creating build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:43,129 copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:43,164 copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:43,166 copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:43,169 copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:43,173 creating build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-02T05:13:43,173 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-02T05:13:43,316 copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-02T05:13:43,334 creating build/lib/funid/external/mmseqs_Windows 2023-06-02T05:13:43,336 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2023-06-02T05:13:43,339 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2023-06-02T05:13:43,343 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2023-06-02T05:13:43,345 creating build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,346 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,358 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,361 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,365 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,371 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,401 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,463 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,467 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:43,650 creating build/lib/funid/external/mmseqs_Windows/examples 2023-06-02T05:13:43,651 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-06-02T05:13:43,658 creating build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,660 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,662 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,664 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,667 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,669 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,672 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,675 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,677 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,679 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,682 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,684 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,686 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,689 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,691 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,694 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,696 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,698 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,701 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,703 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,706 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,708 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,711 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,713 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,716 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,718 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,721 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,724 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,727 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,729 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,732 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,734 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,737 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,739 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,742 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,744 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,747 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,750 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,752 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,755 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,757 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,760 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,762 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:43,765 creating build/lib/funid/external/mmseqs_Windows/util 2023-06-02T05:13:43,766 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2023-06-02T05:13:43,769 creating build/lib/funid/external/trimal.v1.2rev59 2023-06-02T05:13:43,769 creating build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:43,771 copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:43,773 copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:43,776 copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:43,779 copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:43,782 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-02T05:13:43,783 copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-02T05:13:43,800 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,801 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,806 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,809 copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,811 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,814 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,816 copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,821 copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,825 copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,829 copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,834 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,836 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,839 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,842 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,844 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,847 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,850 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,852 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,855 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,858 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,860 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,863 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,866 copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:43,868 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2023-06-02T05:13:43,871 copying funid/data/genus_line.txt -> build/lib/funid/data 2023-06-02T05:13:43,875 creating build/lib/funid/test_dataset 2023-06-02T05:13:43,876 creating build/lib/funid/test_dataset/penicillium 2023-06-02T05:13:43,877 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2023-06-02T05:13:43,880 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2023-06-02T05:13:43,882 creating build/lib/funid/test_dataset/penicillium/DB 2023-06-02T05:13:43,883 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2023-06-02T05:13:43,894 creating build/lib/funid/test_dataset/penicillium/Query 2023-06-02T05:13:43,895 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2023-06-02T05:13:43,902 creating build/lib/funid/preset 2023-06-02T05:13:43,903 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2023-06-02T05:13:43,904 copying funid/preset/fast.yaml -> build/lib/funid/preset 2023-06-02T05:13:43,936 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-02T05:13:43,937 !! 2023-06-02T05:13:43,937 ******************************************************************************** 2023-06-02T05:13:43,937 Please avoid running ``setup.py`` directly. 2023-06-02T05:13:43,937 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-02T05:13:43,937 other standards-based tools. 2023-06-02T05:13:43,938 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-02T05:13:43,938 ******************************************************************************** 2023-06-02T05:13:43,938 !! 2023-06-02T05:13:43,938 self.initialize_options() 2023-06-02T05:13:43,962 installing to build/bdist.linux-armv7l/wheel 2023-06-02T05:13:43,962 running install 2023-06-02T05:13:43,987 running install_lib 2023-06-02T05:13:44,013 creating build/bdist.linux-armv7l 2023-06-02T05:13:44,013 creating build/bdist.linux-armv7l/wheel 2023-06-02T05:13:44,015 creating build/bdist.linux-armv7l/wheel/funid 2023-06-02T05:13:44,016 creating build/bdist.linux-armv7l/wheel/funid/data 2023-06-02T05:13:44,017 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-02T05:13:44,020 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-02T05:13:44,021 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-02T05:13:44,024 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-02T05:13:44,026 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2023-06-02T05:13:44,028 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-02T05:13:44,028 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-02T05:13:44,031 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-06-02T05:13:44,031 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-06-02T05:13:44,041 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-02T05:13:44,043 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-06-02T05:13:44,044 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-06-02T05:13:44,049 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-02T05:13:44,051 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-02T05:13:44,053 creating build/bdist.linux-armv7l/wheel/funid/preset 2023-06-02T05:13:44,054 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-06-02T05:13:44,055 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-06-02T05:13:44,058 creating build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,059 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,062 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,064 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,066 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,068 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,070 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,072 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,074 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,077 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,079 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,081 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,083 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,085 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,088 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,090 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,092 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,094 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,095 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,097 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,100 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,101 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,103 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,106 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,107 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,109 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,112 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-02T05:13:44,114 creating build/bdist.linux-armv7l/wheel/funid/external 2023-06-02T05:13:44,116 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:44,117 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:44,118 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:44,121 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:44,161 copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-02T05:13:44,165 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-02T05:13:44,166 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-02T05:13:44,349 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-02T05:13:44,367 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-02T05:13:44,368 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-02T05:13:44,369 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-02T05:13:44,400 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-02T05:13:44,404 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59 2023-06-02T05:13:44,405 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:44,406 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:44,409 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,409 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,411 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,413 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,416 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,417 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,419 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,423 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,424 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,427 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,429 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,431 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,435 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,437 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,438 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,441 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,444 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,445 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,448 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,451 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,455 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,457 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,460 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-02T05:13:44,462 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:44,464 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:44,467 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-02T05:13:44,470 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-02T05:13:44,471 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-02T05:13:44,488 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-02T05:13:44,862 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-02T05:13:44,862 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-02T05:13:44,864 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-02T05:13:44,868 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-06-02T05:13:44,868 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-06-02T05:13:44,871 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-06-02T05:13:44,872 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-06-02T05:13:44,879 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,880 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,882 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,883 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,885 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,887 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,889 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,890 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,892 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,894 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,896 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,897 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,899 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,901 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,903 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,905 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,908 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,910 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,912 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,914 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,916 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,918 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,919 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,921 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,923 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,925 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,926 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,928 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,930 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,932 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,933 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,935 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,937 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,938 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,940 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,942 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,943 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,946 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,948 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,950 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,952 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,954 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,956 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-02T05:13:44,959 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-02T05:13:44,962 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:44,962 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:44,982 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:44,987 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:45,058 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:45,061 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:45,065 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:45,070 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:45,243 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-02T05:13:45,272 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-02T05:13:45,274 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-02T05:13:45,276 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-06-02T05:13:45,277 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-06-02T05:13:45,284 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2023-06-02T05:13:45,285 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:45,287 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:45,288 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:45,295 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-02T05:13:45,296 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-02T05:13:45,299 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-02T05:13:45,301 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:45,301 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:45,303 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:45,305 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:45,307 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-02T05:13:45,310 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-06-02T05:13:45,311 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-06-02T05:13:45,314 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-06-02T05:13:45,315 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-06-02T05:13:45,317 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,318 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,322 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,325 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,502 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,751 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,754 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,756 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-02T05:13:45,759 running install_egg_info 2023-06-02T05:13:45,788 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.9-py3.9.egg-info 2023-06-02T05:13:45,801 running install_scripts 2023-06-02T05:13:45,824 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-06-02T05:13:45,829 creating build/bdist.linux-armv7l/wheel/FunID-0.3.9.dist-info/WHEEL 2023-06-02T05:13:45,832 creating '/tmp/pip-wheel-zmq8fa8m/FunID-0.3.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-02T05:13:45,837 adding 'funid/FunID_GUI.py' 2023-06-02T05:13:45,839 adding 'funid/__init__.py' 2023-06-02T05:13:45,841 adding 'funid/main.py' 2023-06-02T05:13:45,845 adding 'funid/data/Option_manager.xlsx' 2023-06-02T05:13:45,847 adding 'funid/data/__init__.py' 2023-06-02T05:13:45,855 adding 'funid/data/genus_line.txt' 2023-06-02T05:13:45,862 adding 'funid/external/MAFFT_LICENSE' 2023-06-02T05:13:48,923 adding 'funid/external/MAFFT_Windows.zip' 2023-06-02T05:13:49,092 adding 'funid/external/__init__.py' 2023-06-02T05:13:49,101 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2023-06-02T05:13:52,055 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2023-06-02T05:13:52,161 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2023-06-02T05:13:52,163 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2023-06-02T05:13:52,168 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2023-06-02T05:13:54,220 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2023-06-02T05:13:54,320 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2023-06-02T05:13:54,324 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2023-06-02T05:13:54,326 adding 'funid/external/BLAST_Windows/doc/README.txt' 2023-06-02T05:13:54,383 adding 'funid/external/FastTree_Windows/FastTree.exe' 2023-06-02T05:13:54,425 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2023-06-02T05:13:54,428 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2023-06-02T05:13:54,429 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2023-06-02T05:13:54,435 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2023-06-02T05:13:54,438 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2023-06-02T05:13:54,441 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2023-06-02T05:13:54,442 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2023-06-02T05:13:54,445 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2023-06-02T05:13:54,452 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2023-06-02T05:13:54,454 adding 'funid/external/RAxML_Windows/README' 2023-06-02T05:13:54,746 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2023-06-02T05:13:54,839 adding 'funid/external/iqtree-2.1.3-Windows/example.cf' 2023-06-02T05:13:54,854 adding 'funid/external/iqtree-2.1.3-Windows/example.nex' 2023-06-02T05:13:54,867 adding 'funid/external/iqtree-2.1.3-Windows/example.phy' 2023-06-02T05:13:54,898 adding 'funid/external/iqtree-2.1.3-Windows/models.nex' 2023-06-02T05:13:56,614 adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe' 2023-06-02T05:13:56,864 adding 'funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll' 2023-06-02T05:13:56,878 adding 'funid/external/mmseqs_Windows/LICENSE.md' 2023-06-02T05:13:56,880 adding 'funid/external/mmseqs_Windows/README.md' 2023-06-02T05:13:56,882 adding 'funid/external/mmseqs_Windows/mmseqs.bat' 2023-06-02T05:13:57,016 adding 'funid/external/mmseqs_Windows/bin/busybox.exe' 2023-06-02T05:13:57,031 adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll' 2023-06-02T05:13:57,045 adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2023-06-02T05:13:57,088 adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll' 2023-06-02T05:13:57,351 adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2023-06-02T05:13:57,952 adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll' 2023-06-02T05:13:57,989 adding 'funid/external/mmseqs_Windows/bin/cygz.dll' 2023-06-02T05:14:01,258 adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe' 2023-06-02T05:14:01,381 adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta' 2023-06-02T05:14:01,386 adding 'funid/external/mmseqs_Windows/matrices/PAM10.out' 2023-06-02T05:14:01,387 adding 'funid/external/mmseqs_Windows/matrices/PAM100.out' 2023-06-02T05:14:01,389 adding 'funid/external/mmseqs_Windows/matrices/PAM110.out' 2023-06-02T05:14:01,391 adding 'funid/external/mmseqs_Windows/matrices/PAM120.out' 2023-06-02T05:14:01,392 adding 'funid/external/mmseqs_Windows/matrices/PAM130.out' 2023-06-02T05:14:01,394 adding 'funid/external/mmseqs_Windows/matrices/PAM140.out' 2023-06-02T05:14:01,395 adding 'funid/external/mmseqs_Windows/matrices/PAM150.out' 2023-06-02T05:14:01,397 adding 'funid/external/mmseqs_Windows/matrices/PAM160.out' 2023-06-02T05:14:01,399 adding 'funid/external/mmseqs_Windows/matrices/PAM170.out' 2023-06-02T05:14:01,400 adding 'funid/external/mmseqs_Windows/matrices/PAM180.out' 2023-06-02T05:14:01,402 adding 'funid/external/mmseqs_Windows/matrices/PAM190.out' 2023-06-02T05:14:01,404 adding 'funid/external/mmseqs_Windows/matrices/PAM20.out' 2023-06-02T05:14:01,405 adding 'funid/external/mmseqs_Windows/matrices/PAM30.out' 2023-06-02T05:14:01,407 adding 'funid/external/mmseqs_Windows/matrices/PAM40.out' 2023-06-02T05:14:01,408 adding 'funid/external/mmseqs_Windows/matrices/PAM50.out' 2023-06-02T05:14:01,410 adding 'funid/external/mmseqs_Windows/matrices/PAM60.out' 2023-06-02T05:14:01,412 adding 'funid/external/mmseqs_Windows/matrices/PAM70.out' 2023-06-02T05:14:01,413 adding 'funid/external/mmseqs_Windows/matrices/PAM80.out' 2023-06-02T05:14:01,415 adding 'funid/external/mmseqs_Windows/matrices/PAM90.out' 2023-06-02T05:14:01,417 adding 'funid/external/mmseqs_Windows/matrices/VTML10.out' 2023-06-02T05:14:01,418 adding 'funid/external/mmseqs_Windows/matrices/VTML120.out' 2023-06-02T05:14:01,420 adding 'funid/external/mmseqs_Windows/matrices/VTML160.out' 2023-06-02T05:14:01,422 adding 'funid/external/mmseqs_Windows/matrices/VTML20.out' 2023-06-02T05:14:01,423 adding 'funid/external/mmseqs_Windows/matrices/VTML40.out' 2023-06-02T05:14:01,425 adding 'funid/external/mmseqs_Windows/matrices/VTML80.out' 2023-06-02T05:14:01,427 adding 'funid/external/mmseqs_Windows/matrices/blosum100.out' 2023-06-02T05:14:01,429 adding 'funid/external/mmseqs_Windows/matrices/blosum30.out' 2023-06-02T05:14:01,430 adding 'funid/external/mmseqs_Windows/matrices/blosum35.out' 2023-06-02T05:14:01,432 adding 'funid/external/mmseqs_Windows/matrices/blosum40.out' 2023-06-02T05:14:01,434 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'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h' 2023-06-02T05:14:01,588 adding 'funid/external/trimal.v1.2rev59/trimAl/source/main.cpp' 2023-06-02T05:14:01,589 adding 'funid/external/trimal.v1.2rev59/trimAl/source/makefile' 2023-06-02T05:14:01,591 adding 'funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp' 2023-06-02T05:14:01,596 adding 'funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp' 2023-06-02T05:14:01,598 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp' 2023-06-02T05:14:01,599 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h' 2023-06-02T05:14:01,601 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp' 2023-06-02T05:14:01,603 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h' 2023-06-02T05:14:01,605 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp' 2023-06-02T05:14:01,607 adding 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'funid/src/cluster.py' 2023-06-02T05:14:01,628 adding 'funid/src/command.py' 2023-06-02T05:14:01,630 adding 'funid/src/concatenate.py' 2023-06-02T05:14:01,632 adding 'funid/src/dataset.py' 2023-06-02T05:14:01,634 adding 'funid/src/ext.py' 2023-06-02T05:14:01,636 adding 'funid/src/hasher.py' 2023-06-02T05:14:01,638 adding 'funid/src/initialize.py' 2023-06-02T05:14:01,639 adding 'funid/src/logger.py' 2023-06-02T05:14:01,640 adding 'funid/src/logics.py' 2023-06-02T05:14:01,644 adding 'funid/src/manage_input.py' 2023-06-02T05:14:01,646 adding 'funid/src/modeltest.py' 2023-06-02T05:14:01,647 adding 'funid/src/ncbi.py' 2023-06-02T05:14:01,648 adding 'funid/src/opt_generator.py' 2023-06-02T05:14:01,650 adding 'funid/src/patch.py' 2023-06-02T05:14:01,654 adding 'funid/src/reporter.py' 2023-06-02T05:14:01,656 adding 'funid/src/save.py' 2023-06-02T05:14:01,658 adding 'funid/src/search.py' 2023-06-02T05:14:01,660 adding 'funid/src/tool.py' 2023-06-02T05:14:01,661 adding 'funid/src/tree.py' 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'FunID-0.3.9.dist-info/RECORD' 2023-06-02T05:14:02,280 removing build/bdist.linux-armv7l/wheel 2023-06-02T05:14:02,442 Building wheel for funid (setup.py): finished with status 'done' 2023-06-02T05:14:02,984 Created wheel for funid: filename=FunID-0.3.9-py3-none-any.whl size=51619494 sha256=4431b10bd1c85b826c3ec29a0d6012ea6c189c62b3b9a78ca40cb341e5aba58a 2023-06-02T05:14:02,985 Stored in directory: /tmp/pip-ephem-wheel-cache-w76583go/wheels/e3/d2/33/b87f3fa98693ab8f273c7a74f576c7e462aabe66ca150b3e38 2023-06-02T05:14:03,017 Successfully built funid 2023-06-02T05:14:04,198 Removed build tracker: '/tmp/pip-build-tracker-cendgmpf'