2023-06-06T16:06:00,734 Created temporary directory: /tmp/pip-build-tracker-0n_w3zrv 2023-06-06T16:06:00,737 Initialized build tracking at /tmp/pip-build-tracker-0n_w3zrv 2023-06-06T16:06:00,737 Created build tracker: /tmp/pip-build-tracker-0n_w3zrv 2023-06-06T16:06:00,737 Entered build tracker: /tmp/pip-build-tracker-0n_w3zrv 2023-06-06T16:06:00,738 Created temporary directory: /tmp/pip-wheel-vbhhpomd 2023-06-06T16:06:00,747 Created temporary directory: /tmp/pip-ephem-wheel-cache-ys_s781b 2023-06-06T16:06:00,798 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-06T16:06:00,806 2 location(s) to search for versions of dnachisel: 2023-06-06T16:06:00,806 * https://pypi.org/simple/dnachisel/ 2023-06-06T16:06:00,806 * https://www.piwheels.org/simple/dnachisel/ 2023-06-06T16:06:00,807 Fetching project page and analyzing links: https://pypi.org/simple/dnachisel/ 2023-06-06T16:06:00,808 Getting page https://pypi.org/simple/dnachisel/ 2023-06-06T16:06:00,813 Found index url https://pypi.org/simple/ 2023-06-06T16:06:01,005 Fetched page https://pypi.org/simple/dnachisel/ as application/vnd.pypi.simple.v1+json 2023-06-06T16:06:01,029 Found link https://files.pythonhosted.org/packages/05/47/a96748f3a5b7244f0831e226d5e41739a4d5e9ce407bbc8a2780a75aaff9/dnachisel-0.1.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.0 2023-06-06T16:06:01,030 Found link https://files.pythonhosted.org/packages/f1/47/a7e5698b69ef6ccff6f92c2114b5d4274fafd847309180e643a0463c71ad/dnachisel-0.1.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.1 2023-06-06T16:06:01,031 Found link https://files.pythonhosted.org/packages/44/f2/2ca105de7874b06905dca1ce5889c8523a2c76bc940383cd41ea5e63384a/dnachisel-0.1.2.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.2 2023-06-06T16:06:01,032 Found link https://files.pythonhosted.org/packages/a2/41/df1ebdb209906aa5339e4e07844efd206cdeb535ed3d158d247ee183346b/dnachisel-0.1.3.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.3 2023-06-06T16:06:01,033 Found link https://files.pythonhosted.org/packages/05/8d/6fa334dd787e19a6c059b8b40435c0a92041ecdd350f4d3a3729a0b15380/dnachisel-0.1.4.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.4 2023-06-06T16:06:01,033 Found link https://files.pythonhosted.org/packages/9d/a3/b300e0794e4d26492d5bb17f48d4acb9f5e9ad5a09393ae21e126e2cc38a/dnachisel-0.1.5.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.5 2023-06-06T16:06:01,034 Found link https://files.pythonhosted.org/packages/31/58/e3c107bbfceb08be5b2e7d67c24a4cb779e59300e0591a795ddc53e8eeab/dnachisel-0.1.6.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.6 2023-06-06T16:06:01,035 Found link https://files.pythonhosted.org/packages/a3/23/47c02344131eaeb270e89ca4e38226a0dc7e1b0c156a8b6d92c4a1645c5a/dnachisel-0.1.7.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.7 2023-06-06T16:06:01,035 Found link https://files.pythonhosted.org/packages/92/7c/7d2bc5e0742106a515fe2355493b8c923c8f47dd7c5de84592c9337cbd89/dnachisel-0.1.8.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.8 2023-06-06T16:06:01,036 Found link https://files.pythonhosted.org/packages/c0/c1/7970faf4a8eec61766eb311ee586a70fe838f9e4c58ab812b83276d61f0c/dnachisel-0.1.9.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.1.9 2023-06-06T16:06:01,037 Found link https://files.pythonhosted.org/packages/a0/0b/85ee2c0625a40c535e6a33413d5f523edb5c6546917929ba2e7c03828ab6/dnachisel-0.2.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.2.0 2023-06-06T16:06:01,037 Found link https://files.pythonhosted.org/packages/c0/29/db1c95f8e340101f9332b267e2995935f2f62bb5ff11393180ffd096549e/dnachisel-0.3.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.3.0 2023-06-06T16:06:01,038 Found link https://files.pythonhosted.org/packages/a5/36/fdfbf8e7b94c4bac0c1accae5fc84acac47f3cce59fee55e2d67e2b3a8d0/dnachisel-0.3.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 0.3.1 2023-06-06T16:06:01,039 Found link https://files.pythonhosted.org/packages/29/2c/05743f061b8604c700ced74c2c036f2e02d5bcc179f96670739019d539fb/dnachisel-1.0.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.0.0 2023-06-06T16:06:01,039 Found link https://files.pythonhosted.org/packages/6b/0b/bba0d5cebcba782549cf8b551b97e57b9e9ec0724b010321133f05fc48fe/dnachisel-1.0.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.0.1 2023-06-06T16:06:01,040 Found link https://files.pythonhosted.org/packages/49/d5/8531e5002b8953c1f00bd3ca8160c61860d1e5694af793ac9db1932d530c/dnachisel-1.0.2.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.0.2 2023-06-06T16:06:01,041 Found link https://files.pythonhosted.org/packages/1a/9f/e3a23a2eb761313cbedf0a6eb5eb4839dcd097a2e0f048caf00a0960a875/dnachisel-1.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.1 2023-06-06T16:06:01,041 Found link https://files.pythonhosted.org/packages/28/3a/90c1c8c66ac4d1855e68d84f5ac4b02725b66269fa1e5f3ad659e8aee5ce/dnachisel-1.2.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.2 2023-06-06T16:06:01,042 Found link https://files.pythonhosted.org/packages/17/72/010b47cc62d2106d185010311b30fd8befd2da3b63d824f1f2a14f0acece/dnachisel-1.3.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.3 2023-06-06T16:06:01,043 Found link https://files.pythonhosted.org/packages/17/a4/2d692becb5bb3b9e8cae803bde47b606c26e58b86149c52d13c320150a92/dnachisel-1.4.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.4 2023-06-06T16:06:01,043 Found link https://files.pythonhosted.org/packages/81/f0/c45e6358561f83b95cd1910cb4fdd4158238abed56cc6ece1013b7b88eee/dnachisel-1.4.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 1.4.1 2023-06-06T16:06:01,044 Found link https://files.pythonhosted.org/packages/66/d8/866a7025c8125864ec06e29d23be478f50a38470fa30ef189b5b9445f12e/dnachisel-2.0.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 2.0.0 2023-06-06T16:06:01,045 Found link https://files.pythonhosted.org/packages/79/c2/8d534725f459a631034e367ae792ea8eecfb6a6a9ce5f24aab857a10244b/dnachisel-2.1.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 2.1.0 2023-06-06T16:06:01,046 Found link https://files.pythonhosted.org/packages/17/0e/0477c7314cf9101442887d397f3d8667e512302f76462108e69781f42800/dnachisel-3.0.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.0.0 2023-06-06T16:06:01,046 Found link https://files.pythonhosted.org/packages/b8/c5/f12a80ad9344e5bb51374da19ad03b8ee641ebb9c7c0fc2aefc6483fcf1d/dnachisel-3.0.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.0.1 2023-06-06T16:06:01,047 Found link https://files.pythonhosted.org/packages/79/61/8eaefa82fef964ae1e0a885eb3bf12d848d3da6c4f74435956669c2beb28/dnachisel-3.0.2.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.0.2 2023-06-06T16:06:01,048 Found link https://files.pythonhosted.org/packages/5e/16/d74e12592595d79c467989a69440fdf95e6017a1c8bcdc842cec3dd114c9/dnachisel-3.1.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.1.0 2023-06-06T16:06:01,048 Found link https://files.pythonhosted.org/packages/60/f1/e44f58e59a4f14e278c3a90e7f033a3b440c3c548695416d3a01bcb77042/dnachisel-3.1.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.1.1 2023-06-06T16:06:01,049 Found link https://files.pythonhosted.org/packages/3b/87/edda73242893e94824c14d59156de99f108fc4972a559fc94787cdef67d3/dnachisel-3.2.0.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.0 2023-06-06T16:06:01,050 Found link https://files.pythonhosted.org/packages/e1/be/1b20535a252ad97c3531cc94a0cbcecfe9d3980c67eadbea9cd3684781da/dnachisel-3.2.1.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.1 2023-06-06T16:06:01,050 Found link https://files.pythonhosted.org/packages/7d/b0/880e8b3ba71010a4feb8337b0dda950566615c5dff31993ef5ea6ad4a6a5/dnachisel-3.2.2.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.2 2023-06-06T16:06:01,051 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/0d/7a/ce563be340e997fa75d47fb9fe2f170fdb55bc326c42def8072c3e3740fe/dnachisel-3.2.3-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,052 Found link https://files.pythonhosted.org/packages/e7/4d/b56bcf7e8806d602ce9da6ca6f824ac8ddfff9156ddf8fd4a10d9a29ea85/dnachisel-3.2.3.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.3 2023-06-06T16:06:01,052 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/6d/29/5a6823ddb0180141c4c571c0c7e5133d9b3804732a7fd30c3d15560a6b9b/dnachisel-3.2.4-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,053 Found link https://files.pythonhosted.org/packages/a4/1e/ce2cc8eb3dfa9bb8d1fffbaa933adbeabaa11808aabd7389ffa08db33800/dnachisel-3.2.4.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.4 2023-06-06T16:06:01,053 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/46/87/070dbf7eb04b07d1e23edf8cfcf8478db09824238a2950ca68856f09094d/dnachisel-3.2.5-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,054 Found link https://files.pythonhosted.org/packages/fa/4a/9a55f2b32a3038cf81ea2c5b3aa17ba052dea00075aeb99e1420ce984601/dnachisel-3.2.5.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.5 2023-06-06T16:06:01,055 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/c4/92/2a245b4af17d89ff891c2430c214e00fa3ba2855bdcc938539d0c5155ca1/dnachisel-3.2.6-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,055 Found link https://files.pythonhosted.org/packages/8b/46/1489037a75121c9256d07e2abb86c07f675e94e93622e3fdedaba88d36be/dnachisel-3.2.6.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.6 2023-06-06T16:06:01,056 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/a5/87/7bbeab309a8efe4833233996cff2a3aec7d4071105d79ff59ffaac9ee185/dnachisel-3.2.7-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,056 Found link https://files.pythonhosted.org/packages/db/9d/4773a4d8d541dd21122b38e59b29f00e516d78ab6142650eea958fefa3cb/dnachisel-3.2.7.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.7 2023-06-06T16:06:01,057 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/b9/ee/ccee1dbdbc01a1e7a5bd8cf26edffc072d1cf13e72bb9c1eb27fee9c9e55/dnachisel-3.2.8-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,057 Found link https://files.pythonhosted.org/packages/5d/08/02698f76702a937a04bc26662829d0a78bbb3320dae7421bc08e91876070/dnachisel-3.2.8.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.8 2023-06-06T16:06:01,058 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/2d/03/bf2942149e149ad2e7349f118f0210b8cfcc5b2764383821934596a8bb2d/dnachisel-3.2.9-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,059 Found link https://files.pythonhosted.org/packages/f9/a6/e022b5b6c59458d86981762e8ce68847138feb47453d4055aa66ed511e62/dnachisel-3.2.9.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.9 2023-06-06T16:06:01,059 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/27/dd/90dbf7e354ed6705b3b3331cbeb9df08e150c7758a2dd91b2ad42e154e04/dnachisel-3.2.10-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,060 Found link https://files.pythonhosted.org/packages/a4/3d/e98af78449b72f3896c299afe87ae32fa01bdfe58eb1b48f7e5e22641cd8/dnachisel-3.2.10.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.10 2023-06-06T16:06:01,060 Skipping link: No binaries permitted for dnachisel: https://files.pythonhosted.org/packages/8c/bf/1de724d9325a3bc16ef71d34edd8fe325dac36ba575f3129c9185fe87944/dnachisel-3.2.11-py3-none-any.whl (from https://pypi.org/simple/dnachisel/) 2023-06-06T16:06:01,061 Found link https://files.pythonhosted.org/packages/bc/0e/15e8406067f03d098d3d6ebec4ee0e8011e1cef12f0f83ee3f5e6b94a10f/dnachisel-3.2.11.tar.gz (from https://pypi.org/simple/dnachisel/), version: 3.2.11 2023-06-06T16:06:01,062 Fetching project page and analyzing links: https://www.piwheels.org/simple/dnachisel/ 2023-06-06T16:06:01,063 Getting page https://www.piwheels.org/simple/dnachisel/ 2023-06-06T16:06:01,065 Found index url https://www.piwheels.org/simple/ 2023-06-06T16:06:01,932 Fetched page https://www.piwheels.org/simple/dnachisel/ as text/html 2023-06-06T16:06:01,961 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.10-py3-none-any.whl#sha256=48785e658a8ffeed555aeffd1771b585ce4f1bd403662d7895d4407f53aafbe0 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,961 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.9-py3-none-any.whl#sha256=608996ab2fd62fef0b648c5523a5eea47273abe30d09688e6c4cdbd04d860f31 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,962 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.8-py3-none-any.whl#sha256=be8a0c387bfba35e26223cda152136231025d08810fdbf2bba7d683af5363979 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,962 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.7-py3-none-any.whl#sha256=77baada49735e3b5e5042efc6ea5c4d92d135a531da3bebd93bb04a03cc7f106 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,963 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.6-py3-none-any.whl#sha256=f18cf0c0b1b9adc2ec228c4e894843c747b9d97937411834493ce7b8c1cd34cb (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,963 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.5-py3-none-any.whl#sha256=2e38275cc6d0113173701ec1001857c4f9006add1f0bf9aff404cf133a9c1133 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,964 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.4-py3-none-any.whl#sha256=ec718b6a514247a24193c8de61048a559f1cbfb53b9b44ceec7e4d999acc9319 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,964 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.3-py3-none-any.whl#sha256=b39ee450b925f8e2ac55e068ec919edcf504327a0613b1ecee20322402d733ab (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,965 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.2-py3-none-any.whl#sha256=8fd88781f8fff12dc05d66877be8511dc22381ddf81e8a6af24a38f0ca908f37 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,965 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.1-py3-none-any.whl#sha256=1f518024417d4e07faf2a3f0df86e3366ae03ebbd8823372499c0f6d2b8b2e14 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,966 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.2.0-py3-none-any.whl#sha256=b6144427379259a2222c0a86028fc91d14b3fc285c5b806c108a9c18845bf819 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,966 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.1.1-py3-none-any.whl#sha256=a4b2536ca2b5aa02a8ccdb112931fafdd1e4391c9f63d68f3d143de028aa4010 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,967 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.1.0-py3-none-any.whl#sha256=7904678c4af6b20044f26a7f509ab5bad72821d68bffe334210da1a8eb48bc4a (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,967 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.0.2-py3-none-any.whl#sha256=58115ebe1d7da29b468cb6cdc05a3bae282c93101066978c2054cd0d3babdd2c (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,968 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-3.0.1-py3-none-any.whl#sha256=57a7fd8d9c032e6d18c635f1f746f53fdb753766458a2fca9511435b31bd7c55 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,969 Skipping link: No binaries permitted for dnachisel: 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https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,971 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-1.4-py3-none-any.whl#sha256=e17788db7e9fcec27084fa66681c503f24bbc23f904a457c3af6d9f1bec2ea61 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,971 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-1.3-py3-none-any.whl#sha256=6b08ae208ece90496a6acb0a4878914158e137d2152fc828fe76b70a8f3a6df4 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,972 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-1.2-py3-none-any.whl#sha256=18ef7992504f10eb2056ed05fe256d3fe239c6342047b6307d58d3bb6791edf6 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,972 Skipping link: No binaries permitted for dnachisel: 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https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,974 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.3.1-py3-none-any.whl#sha256=a598a837493f10bb61e934e4757d36025d1b5b5bb9348edff7bb57d01bf5f24f (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,975 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.3.0-py3-none-any.whl#sha256=d7b03e330c4875a043ecc1ec16106009cf894dc6b0a99b7533c49ebed878fc58 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,975 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.2.0-py3-none-any.whl#sha256=7d61c12fa3638c75829f106e9468ac1b4066b1a4b579649bdcfe3cc344c27a5d (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,976 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.9-py3-none-any.whl#sha256=6ebd850ad81d77043ba20dc582477ddb97facb34372927758a13940ee4d2d149 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,976 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.8-py3-none-any.whl#sha256=d368cca80cf9520850e8ac279a094613da09681d18bfc0e6049941a57db953b4 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,977 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.7-py3-none-any.whl#sha256=4242ba02650e57c774cabd2c1ba0284ee469461b6d2b45cb24d3a51aad5c3c36 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,977 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.6-py3-none-any.whl#sha256=4db6eabde316f2e2b9a710dc3807746a3b3beee41ae631551fc7ab409642f474 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,978 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.5-py3-none-any.whl#sha256=4998f5fcda658998de4c92777a8cac4e65e5114705110bf4d8f1086cdc8f9508 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,978 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.4-py3-none-any.whl#sha256=968fdec0d44d4ea5204340f5772c024b8e0b01b71703ac1207d2a2ff609fe4cb (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,979 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.3-py3-none-any.whl#sha256=318602f99a18c2f77eed77d7d7a31b616d7bfada029a248fb8221754d7221291 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,979 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.2-py3-none-any.whl#sha256=b177947c8b9075f7b835b9ad5f571dc895ad7f503991562de2a08d1ad0a4b74d (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,980 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.1-py3-none-any.whl#sha256=968e1a9ef253338c2e1f85f1184ee77cb9d7e089e9b009aa88d7fe8706290de8 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,980 Skipping link: No binaries permitted for dnachisel: https://www.piwheels.org/simple/dnachisel/dnachisel-0.1.0-py3-none-any.whl#sha256=1f437329a3ec8c1b3fd847a704e5185525a43b3b5fbb2370093c1d9620bed108 (from https://www.piwheels.org/simple/dnachisel/) 2023-06-06T16:06:01,981 Skipping link: not a file: https://www.piwheels.org/simple/dnachisel/ 2023-06-06T16:06:01,981 Skipping link: not a file: https://pypi.org/simple/dnachisel/ 2023-06-06T16:06:02,032 Given no hashes to check 1 links for project 'dnachisel': discarding no candidates 2023-06-06T16:06:02,063 Collecting dnachisel==3.2.11 2023-06-06T16:06:02,067 Created temporary directory: /tmp/pip-unpack-12zkkt5i 2023-06-06T16:06:02,243 Downloading dnachisel-3.2.11.tar.gz (1.5 MB) 2023-06-06T16:06:03,509 Added dnachisel==3.2.11 from https://files.pythonhosted.org/packages/bc/0e/15e8406067f03d098d3d6ebec4ee0e8011e1cef12f0f83ee3f5e6b94a10f/dnachisel-3.2.11.tar.gz to build tracker '/tmp/pip-build-tracker-0n_w3zrv' 2023-06-06T16:06:03,513 Running setup.py (path:/tmp/pip-wheel-vbhhpomd/dnachisel_d8718258c7fb4137a004d170b080f4e9/setup.py) egg_info for package dnachisel 2023-06-06T16:06:03,514 Created temporary directory: /tmp/pip-pip-egg-info-43l89wo3 2023-06-06T16:06:03,514 Preparing metadata (setup.py): started 2023-06-06T16:06:03,517 Running command python setup.py egg_info 2023-06-06T16:06:05,068 running egg_info 2023-06-06T16:06:05,071 creating /tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info 2023-06-06T16:06:05,136 writing /tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/PKG-INFO 2023-06-06T16:06:05,140 writing dependency_links to /tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/dependency_links.txt 2023-06-06T16:06:05,145 writing requirements to /tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/requires.txt 2023-06-06T16:06:05,147 writing top-level names to /tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/top_level.txt 2023-06-06T16:06:05,150 writing manifest file '/tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/SOURCES.txt' 2023-06-06T16:06:05,448 reading manifest file '/tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/SOURCES.txt' 2023-06-06T16:06:05,451 reading manifest template 'MANIFEST.in' 2023-06-06T16:06:05,532 adding license file 'LICENCE.txt' 2023-06-06T16:06:05,552 writing manifest file '/tmp/pip-pip-egg-info-43l89wo3/dnachisel.egg-info/SOURCES.txt' 2023-06-06T16:06:05,674 Preparing metadata (setup.py): finished with status 'done' 2023-06-06T16:06:05,688 Source in /tmp/pip-wheel-vbhhpomd/dnachisel_d8718258c7fb4137a004d170b080f4e9 has version 3.2.11, which satisfies requirement dnachisel==3.2.11 from https://files.pythonhosted.org/packages/bc/0e/15e8406067f03d098d3d6ebec4ee0e8011e1cef12f0f83ee3f5e6b94a10f/dnachisel-3.2.11.tar.gz 2023-06-06T16:06:05,690 Removed dnachisel==3.2.11 from https://files.pythonhosted.org/packages/bc/0e/15e8406067f03d098d3d6ebec4ee0e8011e1cef12f0f83ee3f5e6b94a10f/dnachisel-3.2.11.tar.gz from build tracker '/tmp/pip-build-tracker-0n_w3zrv' 2023-06-06T16:06:05,701 Created temporary directory: /tmp/pip-unpack-7b_ak6s6 2023-06-06T16:06:05,702 Building wheels for collected packages: dnachisel 2023-06-06T16:06:05,711 Created temporary directory: /tmp/pip-wheel-nyna8moz 2023-06-06T16:06:05,712 Building wheel for dnachisel (setup.py): started 2023-06-06T16:06:05,714 Destination directory: /tmp/pip-wheel-nyna8moz 2023-06-06T16:06:05,714 Running command python setup.py bdist_wheel 2023-06-06T16:06:07,323 running bdist_wheel 2023-06-06T16:06:08,047 running build 2023-06-06T16:06:08,048 running build_py 2023-06-06T16:06:08,121 creating build 2023-06-06T16:06:08,123 creating build/lib 2023-06-06T16:06:08,125 creating build/lib/dnachisel 2023-06-06T16:06:08,129 copying dnachisel/Location.py -> build/lib/dnachisel 2023-06-06T16:06:08,134 copying dnachisel/version.py -> build/lib/dnachisel 2023-06-06T16:06:08,138 copying dnachisel/__init__.py -> build/lib/dnachisel 2023-06-06T16:06:08,145 creating build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,147 copying dnachisel/SequencePattern/DnaNotationPattern.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,152 copying dnachisel/SequencePattern/__init__.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,156 copying dnachisel/SequencePattern/RepeatedKmerPattern.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,161 copying dnachisel/SequencePattern/MotifPssmPattern.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,166 copying dnachisel/SequencePattern/EnzymeSitePattern.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,171 copying dnachisel/SequencePattern/SequencePattern.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,176 copying dnachisel/SequencePattern/HomopolymerPattern.py -> build/lib/dnachisel/SequencePattern 2023-06-06T16:06:08,182 creating build/lib/dnachisel/Specification 2023-06-06T16:06:08,185 copying dnachisel/Specification/SpecificationSet.py -> build/lib/dnachisel/Specification 2023-06-06T16:06:08,189 copying dnachisel/Specification/__init__.py -> build/lib/dnachisel/Specification 2023-06-06T16:06:08,193 copying dnachisel/Specification/FeatureRepresentationMixin.py -> build/lib/dnachisel/Specification 2023-06-06T16:06:08,198 copying dnachisel/Specification/Specification.py -> build/lib/dnachisel/Specification 2023-06-06T16:06:08,206 creating build/lib/dnachisel/biotools 2023-06-06T16:06:08,209 copying dnachisel/biotools/bowtie.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,213 copying dnachisel/biotools/genbank_operations.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,218 copying dnachisel/biotools/__init__.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,223 copying dnachisel/biotools/formatting_operations.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,227 copying dnachisel/biotools/sequences_differences.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,232 copying dnachisel/biotools/indices_operations.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,237 copying dnachisel/biotools/blast_sequence.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,242 copying dnachisel/biotools/biotables.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,246 copying dnachisel/biotools/sequences_operations.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,251 copying dnachisel/biotools/enzymes_operations.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,256 copying dnachisel/biotools/gc_content.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,260 copying dnachisel/biotools/random_sequences.py -> build/lib/dnachisel/biotools 2023-06-06T16:06:08,266 creating build/lib/dnachisel/utils 2023-06-06T16:06:08,268 copying dnachisel/utils/__init__.py -> build/lib/dnachisel/utils 2023-06-06T16:06:08,273 copying dnachisel/utils/utils.py -> build/lib/dnachisel/utils 2023-06-06T16:06:08,278 creating build/lib/dnachisel/MutationSpace 2023-06-06T16:06:08,280 copying dnachisel/MutationSpace/MutationSpace.py -> build/lib/dnachisel/MutationSpace 2023-06-06T16:06:08,285 copying dnachisel/MutationSpace/__init__.py -> build/lib/dnachisel/MutationSpace 2023-06-06T16:06:08,289 copying dnachisel/MutationSpace/MutationChoice.py -> build/lib/dnachisel/MutationSpace 2023-06-06T16:06:08,294 creating build/lib/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:08,296 copying dnachisel/DnaOptimizationProblem/CircularDnaOptimizationProblem.py -> build/lib/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:08,301 copying dnachisel/DnaOptimizationProblem/__init__.py -> build/lib/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:08,304 copying dnachisel/DnaOptimizationProblem/NoSolutionError.py -> build/lib/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:08,308 copying dnachisel/DnaOptimizationProblem/DnaOptimizationProblem.py -> build/lib/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:08,316 creating build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,318 copying dnachisel/builtin_specifications/EnforceTerminalGCContent.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,322 copying dnachisel/builtin_specifications/__init__.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,326 copying dnachisel/builtin_specifications/AvoidChanges.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,330 copying dnachisel/builtin_specifications/AvoidBlastMatches.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,334 copying dnachisel/builtin_specifications/AllowPrimer.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,338 copying dnachisel/builtin_specifications/EnforceChoice.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,342 copying dnachisel/builtin_specifications/SequenceLengthBounds.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,346 copying dnachisel/builtin_specifications/TerminalSpecification.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,350 copying dnachisel/builtin_specifications/CodonSpecification.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,354 copying dnachisel/builtin_specifications/AvoidPattern.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,358 copying dnachisel/builtin_specifications/EnforceRegionsCompatibility.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,362 copying dnachisel/builtin_specifications/EnforceSequence.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,366 copying dnachisel/builtin_specifications/UniquifyAllKmers.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,371 copying dnachisel/builtin_specifications/EnforceTranslation.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,376 copying dnachisel/builtin_specifications/EnforceMeltingTemperature.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,379 copying dnachisel/builtin_specifications/EnforceGCContent.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,384 copying dnachisel/builtin_specifications/AvoidHeterodimerization.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,388 copying dnachisel/builtin_specifications/EnforceChanges.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,392 copying dnachisel/builtin_specifications/EnforcePatternOccurence.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,397 copying dnachisel/builtin_specifications/AvoidStopCodons.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,401 copying dnachisel/builtin_specifications/AvoidHairpins.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,405 copying dnachisel/builtin_specifications/AvoidMatches.py -> build/lib/dnachisel/builtin_specifications 2023-06-06T16:06:08,411 creating build/lib/dnachisel/reports 2023-06-06T16:06:08,412 copying dnachisel/reports/__init__.py -> build/lib/dnachisel/reports 2023-06-06T16:06:08,416 copying dnachisel/reports/colors_cycle.py -> build/lib/dnachisel/reports 2023-06-06T16:06:08,420 copying dnachisel/reports/SpecAnnotationsTranslator.py -> build/lib/dnachisel/reports 2023-06-06T16:06:08,424 copying dnachisel/reports/tools.py -> build/lib/dnachisel/reports 2023-06-06T16:06:08,428 copying dnachisel/reports/optimization_reports.py -> build/lib/dnachisel/reports 2023-06-06T16:06:08,434 creating build/lib/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:08,436 copying dnachisel/Specification/SpecEvaluation/__init__.py -> build/lib/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:08,440 copying dnachisel/Specification/SpecEvaluation/SpecEvaluations.py -> build/lib/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:08,445 copying dnachisel/Specification/SpecEvaluation/ProblemConstraintsEvaluations.py -> build/lib/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:08,448 copying dnachisel/Specification/SpecEvaluation/ProblemObjectivesEvaluations.py -> build/lib/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:08,452 copying dnachisel/Specification/SpecEvaluation/SpecEvaluation.py -> build/lib/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:08,458 creating build/lib/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:08,460 copying dnachisel/DnaOptimizationProblem/mixins/__init__.py -> build/lib/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:08,464 copying dnachisel/DnaOptimizationProblem/mixins/ConstraintsSolverMixin.py -> build/lib/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:08,469 copying dnachisel/DnaOptimizationProblem/mixins/RecordRepresentationMixin.py -> build/lib/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:08,473 copying dnachisel/DnaOptimizationProblem/mixins/ObjectivesMaximizerMixin.py -> build/lib/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:08,480 creating build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,481 copying dnachisel/builtin_specifications/codon_optimization/__init__.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,485 copying dnachisel/builtin_specifications/codon_optimization/CodonOptimize.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,490 copying dnachisel/builtin_specifications/codon_optimization/MatchTargetCodonUsage.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,494 copying dnachisel/builtin_specifications/codon_optimization/AvoidRareCodons.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,498 copying dnachisel/builtin_specifications/codon_optimization/BaseCodonOptimizationClass.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,502 copying dnachisel/builtin_specifications/codon_optimization/MaximizeCAI.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,507 copying dnachisel/builtin_specifications/codon_optimization/HarmonizeRCA.py -> build/lib/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:08,512 creating build/lib/dnachisel/reports/constraints_reports 2023-06-06T16:06:08,514 copying dnachisel/reports/constraints_reports/__init__.py -> build/lib/dnachisel/reports/constraints_reports 2023-06-06T16:06:08,518 copying dnachisel/reports/constraints_reports/constraints_reports.py -> build/lib/dnachisel/reports/constraints_reports 2023-06-06T16:06:08,523 copying dnachisel/reports/constraints_reports/GraphicTranslator.py -> build/lib/dnachisel/reports/constraints_reports 2023-06-06T16:06:08,526 copying dnachisel/reports/constraints_reports/constraints_breaches_dataframe.py -> build/lib/dnachisel/reports/constraints_reports 2023-06-06T16:06:08,530 running egg_info 2023-06-06T16:06:08,680 writing dnachisel.egg-info/PKG-INFO 2023-06-06T16:06:08,684 writing dependency_links to dnachisel.egg-info/dependency_links.txt 2023-06-06T16:06:08,688 writing requirements to dnachisel.egg-info/requires.txt 2023-06-06T16:06:08,691 writing top-level names to dnachisel.egg-info/top_level.txt 2023-06-06T16:06:08,784 reading manifest file 'dnachisel.egg-info/SOURCES.txt' 2023-06-06T16:06:08,818 reading manifest template 'MANIFEST.in' 2023-06-06T16:06:08,895 adding license file 'LICENCE.txt' 2023-06-06T16:06:08,922 writing manifest file 'dnachisel.egg-info/SOURCES.txt' 2023-06-06T16:06:08,929 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'dnachisel.biotools.data' is absent from the `packages` configuration. 2023-06-06T16:06:08,930 !! 2023-06-06T16:06:08,930 ******************************************************************************** 2023-06-06T16:06:08,931 ############################ 2023-06-06T16:06:08,931 # Package would be ignored # 2023-06-06T16:06:08,931 ############################ 2023-06-06T16:06:08,932 Python recognizes 'dnachisel.biotools.data' as an importable package[^1], 2023-06-06T16:06:08,932 but it is absent from setuptools' `packages` configuration. 2023-06-06T16:06:08,933 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-06T16:06:08,933 package, please make sure that 'dnachisel.biotools.data' is explicitly added 2023-06-06T16:06:08,933 to the `packages` configuration field. 2023-06-06T16:06:08,934 Alternatively, you can also rely on setuptools' discovery methods 2023-06-06T16:06:08,934 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-06T16:06:08,934 instead of `find_packages(...)`/`find:`). 2023-06-06T16:06:08,935 You can read more about "package discovery" on setuptools documentation page: 2023-06-06T16:06:08,935 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-06T16:06:08,936 If you don't want 'dnachisel.biotools.data' to be distributed and are 2023-06-06T16:06:08,936 already explicitly excluding 'dnachisel.biotools.data' via 2023-06-06T16:06:08,937 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-06T16:06:08,937 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-06T16:06:08,937 combination with a more fine grained `package-data` configuration. 2023-06-06T16:06:08,938 You can read more about "package data files" on setuptools documentation page: 2023-06-06T16:06:08,938 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-06T16:06:08,939 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-06T16:06:08,940 even if it does not contain any `.py` files. 2023-06-06T16:06:08,940 On the other hand, currently there is no concept of package data 2023-06-06T16:06:08,940 directory, all directories are treated like packages. 2023-06-06T16:06:08,940 ******************************************************************************** 2023-06-06T16:06:08,941 !! 2023-06-06T16:06:08,941 check.warn(importable) 2023-06-06T16:06:08,942 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'dnachisel.reports.assets' is absent from the `packages` configuration. 2023-06-06T16:06:08,942 !! 2023-06-06T16:06:08,943 ******************************************************************************** 2023-06-06T16:06:08,943 ############################ 2023-06-06T16:06:08,943 # Package would be ignored # 2023-06-06T16:06:08,943 ############################ 2023-06-06T16:06:08,944 Python recognizes 'dnachisel.reports.assets' as an importable package[^1], 2023-06-06T16:06:08,944 but it is absent from setuptools' `packages` configuration. 2023-06-06T16:06:08,945 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-06T16:06:08,945 package, please make sure that 'dnachisel.reports.assets' is explicitly added 2023-06-06T16:06:08,945 to the `packages` configuration field. 2023-06-06T16:06:08,946 Alternatively, you can also rely on setuptools' discovery methods 2023-06-06T16:06:08,946 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-06T16:06:08,947 instead of `find_packages(...)`/`find:`). 2023-06-06T16:06:08,947 You can read more about "package discovery" on setuptools documentation page: 2023-06-06T16:06:08,948 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-06T16:06:08,949 If you don't want 'dnachisel.reports.assets' to be distributed and are 2023-06-06T16:06:08,949 already explicitly excluding 'dnachisel.reports.assets' via 2023-06-06T16:06:08,950 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-06T16:06:08,950 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-06T16:06:08,951 combination with a more fine grained `package-data` configuration. 2023-06-06T16:06:08,952 You can read more about "package data files" on setuptools documentation page: 2023-06-06T16:06:08,953 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-06T16:06:08,954 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-06T16:06:08,954 even if it does not contain any `.py` files. 2023-06-06T16:06:08,954 On the other hand, currently there is no concept of package data 2023-06-06T16:06:08,955 directory, all directories are treated like packages. 2023-06-06T16:06:08,956 ******************************************************************************** 2023-06-06T16:06:08,956 !! 2023-06-06T16:06:08,957 check.warn(importable) 2023-06-06T16:06:08,957 creating build/lib/dnachisel/biotools/data 2023-06-06T16:06:08,958 copying dnachisel/biotools/data/README.md -> build/lib/dnachisel/biotools/data 2023-06-06T16:06:08,958 copying dnachisel/biotools/data/complements.csv -> build/lib/dnachisel/biotools/data 2023-06-06T16:06:08,959 copying dnachisel/biotools/data/iupac_notation.csv -> build/lib/dnachisel/biotools/data 2023-06-06T16:06:08,962 copying dnachisel/biotools/data/nucleotide_to_regexpr.csv -> build/lib/dnachisel/biotools/data 2023-06-06T16:06:08,966 creating build/lib/dnachisel/reports/assets 2023-06-06T16:06:08,968 copying dnachisel/reports/assets/logo.png -> build/lib/dnachisel/reports/assets 2023-06-06T16:06:08,975 copying dnachisel/reports/assets/optimization_report.pug -> build/lib/dnachisel/reports/assets 2023-06-06T16:06:08,979 copying dnachisel/reports/assets/style.css -> build/lib/dnachisel/reports/assets 2023-06-06T16:06:09,002 running build_scripts 2023-06-06T16:06:09,003 creating build/scripts-3.7 2023-06-06T16:06:09,005 copying and adjusting scripts/dnachisel -> build/scripts-3.7 2023-06-06T16:06:09,009 changing mode of build/scripts-3.7/dnachisel from 644 to 755 2023-06-06T16:06:09,081 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-06T16:06:09,082 !! 2023-06-06T16:06:09,083 ******************************************************************************** 2023-06-06T16:06:09,083 Please avoid running ``setup.py`` directly. 2023-06-06T16:06:09,083 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-06T16:06:09,084 other standards-based tools. 2023-06-06T16:06:09,084 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-06T16:06:09,085 ******************************************************************************** 2023-06-06T16:06:09,085 !! 2023-06-06T16:06:09,086 self.initialize_options() 2023-06-06T16:06:09,147 installing to build/bdist.linux-armv7l/wheel 2023-06-06T16:06:09,148 running install 2023-06-06T16:06:09,207 running install_lib 2023-06-06T16:06:09,276 creating build/bdist.linux-armv7l 2023-06-06T16:06:09,276 creating build/bdist.linux-armv7l/wheel 2023-06-06T16:06:09,280 creating build/bdist.linux-armv7l/wheel/dnachisel 2023-06-06T16:06:09,283 copying build/lib/dnachisel/Location.py -> build/bdist.linux-armv7l/wheel/dnachisel 2023-06-06T16:06:09,288 copying build/lib/dnachisel/version.py -> build/bdist.linux-armv7l/wheel/dnachisel 2023-06-06T16:06:09,291 copying build/lib/dnachisel/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel 2023-06-06T16:06:09,296 creating build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,298 copying build/lib/dnachisel/SequencePattern/DnaNotationPattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,302 copying build/lib/dnachisel/SequencePattern/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,306 copying build/lib/dnachisel/SequencePattern/RepeatedKmerPattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,310 copying build/lib/dnachisel/SequencePattern/MotifPssmPattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,314 copying build/lib/dnachisel/SequencePattern/EnzymeSitePattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,318 copying build/lib/dnachisel/SequencePattern/SequencePattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,323 copying build/lib/dnachisel/SequencePattern/HomopolymerPattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/SequencePattern 2023-06-06T16:06:09,328 creating build/bdist.linux-armv7l/wheel/dnachisel/Specification 2023-06-06T16:06:09,329 copying build/lib/dnachisel/Specification/SpecificationSet.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification 2023-06-06T16:06:09,333 copying build/lib/dnachisel/Specification/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification 2023-06-06T16:06:09,338 creating build/bdist.linux-armv7l/wheel/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:09,340 copying build/lib/dnachisel/Specification/SpecEvaluation/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:09,344 copying build/lib/dnachisel/Specification/SpecEvaluation/SpecEvaluations.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:09,349 copying build/lib/dnachisel/Specification/SpecEvaluation/ProblemConstraintsEvaluations.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:09,353 copying build/lib/dnachisel/Specification/SpecEvaluation/ProblemObjectivesEvaluations.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:09,357 copying build/lib/dnachisel/Specification/SpecEvaluation/SpecEvaluation.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification/SpecEvaluation 2023-06-06T16:06:09,361 copying build/lib/dnachisel/Specification/FeatureRepresentationMixin.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification 2023-06-06T16:06:09,366 copying build/lib/dnachisel/Specification/Specification.py -> build/bdist.linux-armv7l/wheel/dnachisel/Specification 2023-06-06T16:06:09,372 creating build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,373 copying build/lib/dnachisel/biotools/bowtie.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,377 copying build/lib/dnachisel/biotools/genbank_operations.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,382 copying build/lib/dnachisel/biotools/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,386 copying build/lib/dnachisel/biotools/formatting_operations.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,389 copying build/lib/dnachisel/biotools/sequences_differences.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,393 copying build/lib/dnachisel/biotools/indices_operations.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,398 creating build/bdist.linux-armv7l/wheel/dnachisel/biotools/data 2023-06-06T16:06:09,399 copying build/lib/dnachisel/biotools/data/README.md -> build/bdist.linux-armv7l/wheel/dnachisel/biotools/data 2023-06-06T16:06:09,403 copying build/lib/dnachisel/biotools/data/nucleotide_to_regexpr.csv -> build/bdist.linux-armv7l/wheel/dnachisel/biotools/data 2023-06-06T16:06:09,407 copying build/lib/dnachisel/biotools/data/complements.csv -> build/bdist.linux-armv7l/wheel/dnachisel/biotools/data 2023-06-06T16:06:09,410 copying build/lib/dnachisel/biotools/data/iupac_notation.csv -> build/bdist.linux-armv7l/wheel/dnachisel/biotools/data 2023-06-06T16:06:09,414 copying build/lib/dnachisel/biotools/blast_sequence.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,418 copying build/lib/dnachisel/biotools/biotables.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,422 copying build/lib/dnachisel/biotools/sequences_operations.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,425 copying build/lib/dnachisel/biotools/enzymes_operations.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,429 copying build/lib/dnachisel/biotools/gc_content.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,432 copying build/lib/dnachisel/biotools/random_sequences.py -> build/bdist.linux-armv7l/wheel/dnachisel/biotools 2023-06-06T16:06:09,437 creating build/bdist.linux-armv7l/wheel/dnachisel/utils 2023-06-06T16:06:09,439 copying build/lib/dnachisel/utils/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/utils 2023-06-06T16:06:09,443 copying build/lib/dnachisel/utils/utils.py -> build/bdist.linux-armv7l/wheel/dnachisel/utils 2023-06-06T16:06:09,447 creating build/bdist.linux-armv7l/wheel/dnachisel/MutationSpace 2023-06-06T16:06:09,449 copying build/lib/dnachisel/MutationSpace/MutationSpace.py -> build/bdist.linux-armv7l/wheel/dnachisel/MutationSpace 2023-06-06T16:06:09,454 copying build/lib/dnachisel/MutationSpace/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/MutationSpace 2023-06-06T16:06:09,458 copying build/lib/dnachisel/MutationSpace/MutationChoice.py -> build/bdist.linux-armv7l/wheel/dnachisel/MutationSpace 2023-06-06T16:06:09,464 creating build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:09,466 copying build/lib/dnachisel/DnaOptimizationProblem/CircularDnaOptimizationProblem.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:09,471 creating build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:09,473 copying build/lib/dnachisel/DnaOptimizationProblem/mixins/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:09,477 copying build/lib/dnachisel/DnaOptimizationProblem/mixins/ConstraintsSolverMixin.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:09,482 copying build/lib/dnachisel/DnaOptimizationProblem/mixins/RecordRepresentationMixin.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:09,487 copying build/lib/dnachisel/DnaOptimizationProblem/mixins/ObjectivesMaximizerMixin.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem/mixins 2023-06-06T16:06:09,491 copying build/lib/dnachisel/DnaOptimizationProblem/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:09,495 copying build/lib/dnachisel/DnaOptimizationProblem/NoSolutionError.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:09,498 copying build/lib/dnachisel/DnaOptimizationProblem/DnaOptimizationProblem.py -> build/bdist.linux-armv7l/wheel/dnachisel/DnaOptimizationProblem 2023-06-06T16:06:09,505 creating build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,506 copying build/lib/dnachisel/builtin_specifications/EnforceTerminalGCContent.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,510 copying build/lib/dnachisel/builtin_specifications/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,514 copying build/lib/dnachisel/builtin_specifications/AvoidChanges.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,518 copying build/lib/dnachisel/builtin_specifications/AvoidBlastMatches.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,522 copying build/lib/dnachisel/builtin_specifications/AllowPrimer.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,526 copying build/lib/dnachisel/builtin_specifications/EnforceChoice.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,530 copying build/lib/dnachisel/builtin_specifications/SequenceLengthBounds.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,534 copying build/lib/dnachisel/builtin_specifications/TerminalSpecification.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,538 copying build/lib/dnachisel/builtin_specifications/CodonSpecification.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,543 creating build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,545 copying build/lib/dnachisel/builtin_specifications/codon_optimization/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,549 copying build/lib/dnachisel/builtin_specifications/codon_optimization/CodonOptimize.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,554 copying build/lib/dnachisel/builtin_specifications/codon_optimization/MatchTargetCodonUsage.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,558 copying build/lib/dnachisel/builtin_specifications/codon_optimization/AvoidRareCodons.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,562 copying build/lib/dnachisel/builtin_specifications/codon_optimization/BaseCodonOptimizationClass.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,566 copying build/lib/dnachisel/builtin_specifications/codon_optimization/MaximizeCAI.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,570 copying build/lib/dnachisel/builtin_specifications/codon_optimization/HarmonizeRCA.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications/codon_optimization 2023-06-06T16:06:09,575 copying build/lib/dnachisel/builtin_specifications/AvoidPattern.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,579 copying build/lib/dnachisel/builtin_specifications/EnforceRegionsCompatibility.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,583 copying build/lib/dnachisel/builtin_specifications/EnforceSequence.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,587 copying build/lib/dnachisel/builtin_specifications/UniquifyAllKmers.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,592 copying build/lib/dnachisel/builtin_specifications/EnforceTranslation.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,596 copying build/lib/dnachisel/builtin_specifications/EnforceMeltingTemperature.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,600 copying build/lib/dnachisel/builtin_specifications/EnforceGCContent.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,605 copying build/lib/dnachisel/builtin_specifications/AvoidHeterodimerization.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,608 copying build/lib/dnachisel/builtin_specifications/EnforceChanges.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,613 copying build/lib/dnachisel/builtin_specifications/EnforcePatternOccurence.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,617 copying build/lib/dnachisel/builtin_specifications/AvoidStopCodons.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,622 copying build/lib/dnachisel/builtin_specifications/AvoidHairpins.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,626 copying build/lib/dnachisel/builtin_specifications/AvoidMatches.py -> build/bdist.linux-armv7l/wheel/dnachisel/builtin_specifications 2023-06-06T16:06:09,631 creating build/bdist.linux-armv7l/wheel/dnachisel/reports 2023-06-06T16:06:09,634 creating build/bdist.linux-armv7l/wheel/dnachisel/reports/assets 2023-06-06T16:06:09,636 copying build/lib/dnachisel/reports/assets/logo.png -> build/bdist.linux-armv7l/wheel/dnachisel/reports/assets 2023-06-06T16:06:09,641 copying build/lib/dnachisel/reports/assets/style.css -> build/bdist.linux-armv7l/wheel/dnachisel/reports/assets 2023-06-06T16:06:09,644 copying build/lib/dnachisel/reports/assets/optimization_report.pug -> build/bdist.linux-armv7l/wheel/dnachisel/reports/assets 2023-06-06T16:06:09,648 copying build/lib/dnachisel/reports/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports 2023-06-06T16:06:09,653 creating build/bdist.linux-armv7l/wheel/dnachisel/reports/constraints_reports 2023-06-06T16:06:09,654 copying build/lib/dnachisel/reports/constraints_reports/__init__.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports/constraints_reports 2023-06-06T16:06:09,658 copying build/lib/dnachisel/reports/constraints_reports/constraints_reports.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports/constraints_reports 2023-06-06T16:06:09,662 copying build/lib/dnachisel/reports/constraints_reports/GraphicTranslator.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports/constraints_reports 2023-06-06T16:06:09,666 copying build/lib/dnachisel/reports/constraints_reports/constraints_breaches_dataframe.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports/constraints_reports 2023-06-06T16:06:09,670 copying build/lib/dnachisel/reports/colors_cycle.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports 2023-06-06T16:06:09,673 copying build/lib/dnachisel/reports/SpecAnnotationsTranslator.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports 2023-06-06T16:06:09,677 copying build/lib/dnachisel/reports/tools.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports 2023-06-06T16:06:09,681 copying build/lib/dnachisel/reports/optimization_reports.py -> build/bdist.linux-armv7l/wheel/dnachisel/reports 2023-06-06T16:06:09,685 running install_egg_info 2023-06-06T16:06:09,763 Copying dnachisel.egg-info to build/bdist.linux-armv7l/wheel/dnachisel-3.2.11-py3.7.egg-info 2023-06-06T16:06:09,784 running install_scripts 2023-06-06T16:06:09,786 creating build/bdist.linux-armv7l/wheel/dnachisel-3.2.11.data 2023-06-06T16:06:09,787 creating build/bdist.linux-armv7l/wheel/dnachisel-3.2.11.data/scripts 2023-06-06T16:06:09,789 copying build/scripts-3.7/dnachisel -> build/bdist.linux-armv7l/wheel/dnachisel-3.2.11.data/scripts 2023-06-06T16:06:09,792 changing mode of build/bdist.linux-armv7l/wheel/dnachisel-3.2.11.data/scripts/dnachisel to 755 2023-06-06T16:06:09,832 creating build/bdist.linux-armv7l/wheel/dnachisel-3.2.11.dist-info/WHEEL 2023-06-06T16:06:09,837 creating '/tmp/pip-wheel-nyna8moz/dnachisel-3.2.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-06T16:06:09,844 adding 'dnachisel/Location.py' 2023-06-06T16:06:09,847 adding 'dnachisel/__init__.py' 2023-06-06T16:06:09,850 adding 'dnachisel/version.py' 2023-06-06T16:06:09,855 adding 'dnachisel/DnaOptimizationProblem/CircularDnaOptimizationProblem.py' 2023-06-06T16:06:09,860 adding 'dnachisel/DnaOptimizationProblem/DnaOptimizationProblem.py' 2023-06-06T16:06:09,862 adding 'dnachisel/DnaOptimizationProblem/NoSolutionError.py' 2023-06-06T16:06:09,865 adding 'dnachisel/DnaOptimizationProblem/__init__.py' 2023-06-06T16:06:09,871 adding 'dnachisel/DnaOptimizationProblem/mixins/ConstraintsSolverMixin.py' 2023-06-06T16:06:09,875 adding 'dnachisel/DnaOptimizationProblem/mixins/ObjectivesMaximizerMixin.py' 2023-06-06T16:06:09,879 adding 'dnachisel/DnaOptimizationProblem/mixins/RecordRepresentationMixin.py' 2023-06-06T16:06:09,882 adding 'dnachisel/DnaOptimizationProblem/mixins/__init__.py' 2023-06-06T16:06:09,886 adding 'dnachisel/MutationSpace/MutationChoice.py' 2023-06-06T16:06:09,891 adding 'dnachisel/MutationSpace/MutationSpace.py' 2023-06-06T16:06:09,894 adding 'dnachisel/MutationSpace/__init__.py' 2023-06-06T16:06:09,898 adding 'dnachisel/SequencePattern/DnaNotationPattern.py' 2023-06-06T16:06:09,900 adding 'dnachisel/SequencePattern/EnzymeSitePattern.py' 2023-06-06T16:06:09,903 adding 'dnachisel/SequencePattern/HomopolymerPattern.py' 2023-06-06T16:06:09,906 adding 'dnachisel/SequencePattern/MotifPssmPattern.py' 2023-06-06T16:06:09,909 adding 'dnachisel/SequencePattern/RepeatedKmerPattern.py' 2023-06-06T16:06:09,913 adding 'dnachisel/SequencePattern/SequencePattern.py' 2023-06-06T16:06:09,915 adding 'dnachisel/SequencePattern/__init__.py' 2023-06-06T16:06:09,920 adding 'dnachisel/Specification/FeatureRepresentationMixin.py' 2023-06-06T16:06:09,924 adding 'dnachisel/Specification/Specification.py' 2023-06-06T16:06:09,926 adding 'dnachisel/Specification/SpecificationSet.py' 2023-06-06T16:06:09,929 adding 'dnachisel/Specification/__init__.py' 2023-06-06T16:06:09,933 adding 'dnachisel/Specification/SpecEvaluation/ProblemConstraintsEvaluations.py' 2023-06-06T16:06:09,935 adding 'dnachisel/Specification/SpecEvaluation/ProblemObjectivesEvaluations.py' 2023-06-06T16:06:09,939 adding 'dnachisel/Specification/SpecEvaluation/SpecEvaluation.py' 2023-06-06T16:06:09,942 adding 'dnachisel/Specification/SpecEvaluation/SpecEvaluations.py' 2023-06-06T16:06:09,945 adding 'dnachisel/Specification/SpecEvaluation/__init__.py' 2023-06-06T16:06:09,949 adding 'dnachisel/biotools/__init__.py' 2023-06-06T16:06:09,952 adding 'dnachisel/biotools/biotables.py' 2023-06-06T16:06:09,955 adding 'dnachisel/biotools/blast_sequence.py' 2023-06-06T16:06:09,958 adding 'dnachisel/biotools/bowtie.py' 2023-06-06T16:06:09,961 adding 'dnachisel/biotools/enzymes_operations.py' 2023-06-06T16:06:09,963 adding 'dnachisel/biotools/formatting_operations.py' 2023-06-06T16:06:09,966 adding 'dnachisel/biotools/gc_content.py' 2023-06-06T16:06:09,970 adding 'dnachisel/biotools/genbank_operations.py' 2023-06-06T16:06:09,973 adding 'dnachisel/biotools/indices_operations.py' 2023-06-06T16:06:09,976 adding 'dnachisel/biotools/random_sequences.py' 2023-06-06T16:06:09,979 adding 'dnachisel/biotools/sequences_differences.py' 2023-06-06T16:06:09,982 adding 'dnachisel/biotools/sequences_operations.py' 2023-06-06T16:06:09,986 adding 'dnachisel/biotools/data/README.md' 2023-06-06T16:06:09,988 adding 'dnachisel/biotools/data/complements.csv' 2023-06-06T16:06:09,990 adding 'dnachisel/biotools/data/iupac_notation.csv' 2023-06-06T16:06:09,993 adding 'dnachisel/biotools/data/nucleotide_to_regexpr.csv' 2023-06-06T16:06:09,998 adding 'dnachisel/builtin_specifications/AllowPrimer.py' 2023-06-06T16:06:10,001 adding 'dnachisel/builtin_specifications/AvoidBlastMatches.py' 2023-06-06T16:06:10,005 adding 'dnachisel/builtin_specifications/AvoidChanges.py' 2023-06-06T16:06:10,008 adding 'dnachisel/builtin_specifications/AvoidHairpins.py' 2023-06-06T16:06:10,011 adding 'dnachisel/builtin_specifications/AvoidHeterodimerization.py' 2023-06-06T16:06:10,014 adding 'dnachisel/builtin_specifications/AvoidMatches.py' 2023-06-06T16:06:10,017 adding 'dnachisel/builtin_specifications/AvoidPattern.py' 2023-06-06T16:06:10,020 adding 'dnachisel/builtin_specifications/AvoidStopCodons.py' 2023-06-06T16:06:10,023 adding 'dnachisel/builtin_specifications/CodonSpecification.py' 2023-06-06T16:06:10,027 adding 'dnachisel/builtin_specifications/EnforceChanges.py' 2023-06-06T16:06:10,031 adding 'dnachisel/builtin_specifications/EnforceChoice.py' 2023-06-06T16:06:10,034 adding 'dnachisel/builtin_specifications/EnforceGCContent.py' 2023-06-06T16:06:10,037 adding 'dnachisel/builtin_specifications/EnforceMeltingTemperature.py' 2023-06-06T16:06:10,041 adding 'dnachisel/builtin_specifications/EnforcePatternOccurence.py' 2023-06-06T16:06:10,044 adding 'dnachisel/builtin_specifications/EnforceRegionsCompatibility.py' 2023-06-06T16:06:10,047 adding 'dnachisel/builtin_specifications/EnforceSequence.py' 2023-06-06T16:06:10,050 adding 'dnachisel/builtin_specifications/EnforceTerminalGCContent.py' 2023-06-06T16:06:10,054 adding 'dnachisel/builtin_specifications/EnforceTranslation.py' 2023-06-06T16:06:10,057 adding 'dnachisel/builtin_specifications/SequenceLengthBounds.py' 2023-06-06T16:06:10,060 adding 'dnachisel/builtin_specifications/TerminalSpecification.py' 2023-06-06T16:06:10,064 adding 'dnachisel/builtin_specifications/UniquifyAllKmers.py' 2023-06-06T16:06:10,067 adding 'dnachisel/builtin_specifications/__init__.py' 2023-06-06T16:06:10,072 adding 'dnachisel/builtin_specifications/codon_optimization/AvoidRareCodons.py' 2023-06-06T16:06:10,075 adding 'dnachisel/builtin_specifications/codon_optimization/BaseCodonOptimizationClass.py' 2023-06-06T16:06:10,078 adding 'dnachisel/builtin_specifications/codon_optimization/CodonOptimize.py' 2023-06-06T16:06:10,082 adding 'dnachisel/builtin_specifications/codon_optimization/HarmonizeRCA.py' 2023-06-06T16:06:10,086 adding 'dnachisel/builtin_specifications/codon_optimization/MatchTargetCodonUsage.py' 2023-06-06T16:06:10,089 adding 'dnachisel/builtin_specifications/codon_optimization/MaximizeCAI.py' 2023-06-06T16:06:10,092 adding 'dnachisel/builtin_specifications/codon_optimization/__init__.py' 2023-06-06T16:06:10,096 adding 'dnachisel/reports/SpecAnnotationsTranslator.py' 2023-06-06T16:06:10,099 adding 'dnachisel/reports/__init__.py' 2023-06-06T16:06:10,101 adding 'dnachisel/reports/colors_cycle.py' 2023-06-06T16:06:10,106 adding 'dnachisel/reports/optimization_reports.py' 2023-06-06T16:06:10,108 adding 'dnachisel/reports/tools.py' 2023-06-06T16:06:10,117 adding 'dnachisel/reports/assets/logo.png' 2023-06-06T16:06:10,120 adding 'dnachisel/reports/assets/optimization_report.pug' 2023-06-06T16:06:10,122 adding 'dnachisel/reports/assets/style.css' 2023-06-06T16:06:10,126 adding 'dnachisel/reports/constraints_reports/GraphicTranslator.py' 2023-06-06T16:06:10,128 adding 'dnachisel/reports/constraints_reports/__init__.py' 2023-06-06T16:06:10,132 adding 'dnachisel/reports/constraints_reports/constraints_breaches_dataframe.py' 2023-06-06T16:06:10,135 adding 'dnachisel/reports/constraints_reports/constraints_reports.py' 2023-06-06T16:06:10,139 adding 'dnachisel/utils/__init__.py' 2023-06-06T16:06:10,141 adding 'dnachisel/utils/utils.py' 2023-06-06T16:06:10,146 adding 'dnachisel-3.2.11.data/scripts/dnachisel' 2023-06-06T16:06:10,151 adding 'dnachisel-3.2.11.dist-info/LICENCE.txt' 2023-06-06T16:06:10,153 adding 'dnachisel-3.2.11.dist-info/METADATA' 2023-06-06T16:06:10,155 adding 'dnachisel-3.2.11.dist-info/WHEEL' 2023-06-06T16:06:10,157 adding 'dnachisel-3.2.11.dist-info/top_level.txt' 2023-06-06T16:06:10,162 adding 'dnachisel-3.2.11.dist-info/RECORD' 2023-06-06T16:06:10,173 removing build/bdist.linux-armv7l/wheel 2023-06-06T16:06:10,383 Building wheel for dnachisel (setup.py): finished with status 'done' 2023-06-06T16:06:10,395 Created wheel for dnachisel: filename=dnachisel-3.2.11-py3-none-any.whl size=146681 sha256=84d6eaf40839fdc892f2575def704997d95c79626bdca219354f148eedd16349 2023-06-06T16:06:10,397 Stored in directory: /tmp/pip-ephem-wheel-cache-ys_s781b/wheels/85/40/07/a015fa8f8f55faf9c505a0c1338816ebbad215afa31d352c44 2023-06-06T16:06:10,431 Successfully built dnachisel 2023-06-06T16:06:10,450 Removed build tracker: '/tmp/pip-build-tracker-0n_w3zrv'