2023-06-07T15:22:36,453 Created temporary directory: /tmp/pip-build-tracker-xrhtjhun 2023-06-07T15:22:36,456 Initialized build tracking at /tmp/pip-build-tracker-xrhtjhun 2023-06-07T15:22:36,456 Created build tracker: /tmp/pip-build-tracker-xrhtjhun 2023-06-07T15:22:36,457 Entered build tracker: /tmp/pip-build-tracker-xrhtjhun 2023-06-07T15:22:36,458 Created temporary directory: /tmp/pip-wheel-0siq0xy0 2023-06-07T15:22:36,466 Created temporary directory: /tmp/pip-ephem-wheel-cache-tbdjka_5 2023-06-07T15:22:36,519 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-07T15:22:36,527 2 location(s) to search for versions of xalign: 2023-06-07T15:22:36,527 * https://pypi.org/simple/xalign/ 2023-06-07T15:22:36,527 * https://www.piwheels.org/simple/xalign/ 2023-06-07T15:22:36,528 Fetching project page and analyzing links: https://pypi.org/simple/xalign/ 2023-06-07T15:22:36,529 Getting page https://pypi.org/simple/xalign/ 2023-06-07T15:22:36,533 Found index url https://pypi.org/simple/ 2023-06-07T15:22:36,719 Fetched page https://pypi.org/simple/xalign/ as application/vnd.pypi.simple.v1+json 2023-06-07T15:22:36,722 Found link https://files.pythonhosted.org/packages/93/97/5b42679e7047ebbcef12812c134a669e9eecbd9b01b30eda93b45ec2647e/xalign-0.1.73.tar.gz (from https://pypi.org/simple/xalign/) (requires-python:>=3.6), version: 0.1.73 2023-06-07T15:22:36,723 Fetching project page and analyzing links: https://www.piwheels.org/simple/xalign/ 2023-06-07T15:22:36,724 Getting page https://www.piwheels.org/simple/xalign/ 2023-06-07T15:22:36,726 Found index url https://www.piwheels.org/simple/ 2023-06-07T15:22:36,936 Fetched page https://www.piwheels.org/simple/xalign/ as text/html 2023-06-07T15:22:36,938 Skipping link: not a file: https://www.piwheels.org/simple/xalign/ 2023-06-07T15:22:36,939 Skipping link: not a file: https://pypi.org/simple/xalign/ 2023-06-07T15:22:36,971 Given no hashes to check 1 links for project 'xalign': discarding no candidates 2023-06-07T15:22:37,002 Collecting xalign==0.1.73 2023-06-07T15:22:37,006 Created temporary directory: /tmp/pip-unpack-4d4dmk95 2023-06-07T15:22:37,223 Downloading xalign-0.1.73.tar.gz (6.1 MB) 2023-06-07T15:22:38,965 Added xalign==0.1.73 from https://files.pythonhosted.org/packages/93/97/5b42679e7047ebbcef12812c134a669e9eecbd9b01b30eda93b45ec2647e/xalign-0.1.73.tar.gz to build tracker '/tmp/pip-build-tracker-xrhtjhun' 2023-06-07T15:22:38,968 Running setup.py (path:/tmp/pip-wheel-0siq0xy0/xalign_94250389450b4637abc4bdf08a4cd574/setup.py) egg_info for package xalign 2023-06-07T15:22:38,969 Created temporary directory: /tmp/pip-pip-egg-info-ggdgnqc8 2023-06-07T15:22:38,970 Preparing metadata (setup.py): started 2023-06-07T15:22:38,972 Running command python setup.py egg_info 2023-06-07T15:22:40,472 running egg_info 2023-06-07T15:22:40,475 creating /tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info 2023-06-07T15:22:40,540 writing /tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/PKG-INFO 2023-06-07T15:22:40,545 writing dependency_links to /tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/dependency_links.txt 2023-06-07T15:22:40,549 writing requirements to /tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/requires.txt 2023-06-07T15:22:40,551 writing top-level names to /tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/top_level.txt 2023-06-07T15:22:40,554 writing manifest file '/tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/SOURCES.txt' 2023-06-07T15:22:40,758 reading manifest file '/tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/SOURCES.txt' 2023-06-07T15:22:40,762 adding license file 'LICENSE' 2023-06-07T15:22:40,767 writing manifest file '/tmp/pip-pip-egg-info-ggdgnqc8/xalign.egg-info/SOURCES.txt' 2023-06-07T15:22:40,887 Preparing metadata (setup.py): finished with status 'done' 2023-06-07T15:22:40,900 Source in /tmp/pip-wheel-0siq0xy0/xalign_94250389450b4637abc4bdf08a4cd574 has version 0.1.73, which satisfies requirement xalign==0.1.73 from https://files.pythonhosted.org/packages/93/97/5b42679e7047ebbcef12812c134a669e9eecbd9b01b30eda93b45ec2647e/xalign-0.1.73.tar.gz 2023-06-07T15:22:40,902 Removed xalign==0.1.73 from https://files.pythonhosted.org/packages/93/97/5b42679e7047ebbcef12812c134a669e9eecbd9b01b30eda93b45ec2647e/xalign-0.1.73.tar.gz from build tracker '/tmp/pip-build-tracker-xrhtjhun' 2023-06-07T15:22:40,918 Created temporary directory: /tmp/pip-unpack-a34m26k1 2023-06-07T15:22:40,920 Building wheels for collected packages: xalign 2023-06-07T15:22:40,929 Created temporary directory: /tmp/pip-wheel-u02t3ebi 2023-06-07T15:22:40,929 Building wheel for xalign (setup.py): started 2023-06-07T15:22:40,932 Destination directory: /tmp/pip-wheel-u02t3ebi 2023-06-07T15:22:40,932 Running command python setup.py bdist_wheel 2023-06-07T15:22:42,499 running bdist_wheel 2023-06-07T15:22:43,213 running build 2023-06-07T15:22:43,214 running build_py 2023-06-07T15:22:43,286 creating build 2023-06-07T15:22:43,287 creating build/lib 2023-06-07T15:22:43,289 creating build/lib/xalign 2023-06-07T15:22:43,291 copying xalign/ensembl.py -> build/lib/xalign 2023-06-07T15:22:43,296 copying xalign/sra.py -> build/lib/xalign 2023-06-07T15:22:43,300 copying xalign/file.py -> build/lib/xalign 2023-06-07T15:22:43,304 copying xalign/utils.py -> build/lib/xalign 2023-06-07T15:22:43,308 copying xalign/__init__.py -> build/lib/xalign 2023-06-07T15:22:43,312 running egg_info 2023-06-07T15:22:43,463 writing xalign.egg-info/PKG-INFO 2023-06-07T15:22:43,468 writing dependency_links to xalign.egg-info/dependency_links.txt 2023-06-07T15:22:43,472 writing requirements to xalign.egg-info/requires.txt 2023-06-07T15:22:43,475 writing top-level names to xalign.egg-info/top_level.txt 2023-06-07T15:22:43,547 reading manifest file 'xalign.egg-info/SOURCES.txt' 2023-06-07T15:22:43,551 adding license file 'LICENSE' 2023-06-07T15:22:43,557 writing manifest file 'xalign.egg-info/SOURCES.txt' 2023-06-07T15:22:43,562 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'xalign.data' is absent from the `packages` configuration. 2023-06-07T15:22:43,562 !! 2023-06-07T15:22:43,563 ******************************************************************************** 2023-06-07T15:22:43,564 ############################ 2023-06-07T15:22:43,564 # Package would be ignored # 2023-06-07T15:22:43,565 ############################ 2023-06-07T15:22:43,565 Python recognizes 'xalign.data' as an importable package[^1], 2023-06-07T15:22:43,565 but it is absent from setuptools' `packages` configuration. 2023-06-07T15:22:43,566 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-07T15:22:43,567 package, please make sure that 'xalign.data' is explicitly added 2023-06-07T15:22:43,567 to the `packages` configuration field. 2023-06-07T15:22:43,568 Alternatively, you can also rely on setuptools' discovery methods 2023-06-07T15:22:43,568 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-07T15:22:43,569 instead of `find_packages(...)`/`find:`). 2023-06-07T15:22:43,570 You can read more about "package discovery" on setuptools documentation page: 2023-06-07T15:22:43,571 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-07T15:22:43,572 If you don't want 'xalign.data' to be distributed and are 2023-06-07T15:22:43,572 already explicitly excluding 'xalign.data' via 2023-06-07T15:22:43,573 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-07T15:22:43,573 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-07T15:22:43,574 combination with a more fine grained `package-data` configuration. 2023-06-07T15:22:43,574 You can read more about "package data files" on setuptools documentation page: 2023-06-07T15:22:43,575 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-07T15:22:43,576 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-07T15:22:43,576 even if it does not contain any `.py` files. 2023-06-07T15:22:43,577 On the other hand, currently there is no concept of package data 2023-06-07T15:22:43,577 directory, all directories are treated like packages. 2023-06-07T15:22:43,577 ******************************************************************************** 2023-06-07T15:22:43,578 !! 2023-06-07T15:22:43,578 check.warn(importable) 2023-06-07T15:22:43,578 creating build/lib/xalign/data 2023-06-07T15:22:43,579 copying xalign/data/config.json -> build/lib/xalign/data 2023-06-07T15:22:43,579 copying xalign/data/fasterq-dump.tar.gz -> build/lib/xalign/data 2023-06-07T15:22:43,673 copying xalign/data/fasterq.tar.gz -> build/lib/xalign/data 2023-06-07T15:22:43,958 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-07T15:22:43,959 !! 2023-06-07T15:22:43,960 ******************************************************************************** 2023-06-07T15:22:43,960 Please avoid running ``setup.py`` directly. 2023-06-07T15:22:43,961 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-07T15:22:43,961 other standards-based tools. 2023-06-07T15:22:43,962 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-07T15:22:43,962 ******************************************************************************** 2023-06-07T15:22:43,963 !! 2023-06-07T15:22:43,963 self.initialize_options() 2023-06-07T15:22:44,027 installing to build/bdist.linux-armv7l/wheel 2023-06-07T15:22:44,027 running install 2023-06-07T15:22:44,091 running install_lib 2023-06-07T15:22:44,162 creating build/bdist.linux-armv7l 2023-06-07T15:22:44,163 creating build/bdist.linux-armv7l/wheel 2023-06-07T15:22:44,166 creating build/bdist.linux-armv7l/wheel/xalign 2023-06-07T15:22:44,169 copying build/lib/xalign/ensembl.py -> build/bdist.linux-armv7l/wheel/xalign 2023-06-07T15:22:44,175 creating build/bdist.linux-armv7l/wheel/xalign/data 2023-06-07T15:22:44,176 copying build/lib/xalign/data/config.json -> build/bdist.linux-armv7l/wheel/xalign/data 2023-06-07T15:22:44,180 copying build/lib/xalign/data/fasterq.tar.gz -> build/bdist.linux-armv7l/wheel/xalign/data 2023-06-07T15:22:44,380 copying build/lib/xalign/data/fasterq-dump.tar.gz -> build/bdist.linux-armv7l/wheel/xalign/data 2023-06-07T15:22:44,480 copying build/lib/xalign/sra.py -> build/bdist.linux-armv7l/wheel/xalign 2023-06-07T15:22:44,484 copying build/lib/xalign/file.py -> build/bdist.linux-armv7l/wheel/xalign 2023-06-07T15:22:44,488 copying build/lib/xalign/utils.py -> build/bdist.linux-armv7l/wheel/xalign 2023-06-07T15:22:44,491 copying build/lib/xalign/__init__.py -> build/bdist.linux-armv7l/wheel/xalign 2023-06-07T15:22:44,495 running install_egg_info 2023-06-07T15:22:44,573 Copying xalign.egg-info to build/bdist.linux-armv7l/wheel/xalign-0.1.73-py3.7.egg-info 2023-06-07T15:22:44,594 running install_scripts 2023-06-07T15:22:44,629 creating build/bdist.linux-armv7l/wheel/xalign-0.1.73.dist-info/WHEEL 2023-06-07T15:22:44,635 creating '/tmp/pip-wheel-u02t3ebi/xalign-0.1.73-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-07T15:22:44,641 adding 'xalign/__init__.py' 2023-06-07T15:22:44,645 adding 'xalign/ensembl.py' 2023-06-07T15:22:44,647 adding 'xalign/file.py' 2023-06-07T15:22:44,650 adding 'xalign/sra.py' 2023-06-07T15:22:44,653 adding 'xalign/utils.py' 2023-06-07T15:22:44,656 adding 'xalign/data/config.json' 2023-06-07T15:22:45,216 adding 'xalign/data/fasterq-dump.tar.gz' 2023-06-07T15:22:46,412 adding 'xalign/data/fasterq.tar.gz' 2023-06-07T15:22:46,501 adding 'xalign-0.1.73.dist-info/LICENSE' 2023-06-07T15:22:46,504 adding 'xalign-0.1.73.dist-info/METADATA' 2023-06-07T15:22:46,507 adding 'xalign-0.1.73.dist-info/WHEEL' 2023-06-07T15:22:46,508 adding 'xalign-0.1.73.dist-info/top_level.txt' 2023-06-07T15:22:46,510 adding 'xalign-0.1.73.dist-info/RECORD' 2023-06-07T15:22:46,689 removing build/bdist.linux-armv7l/wheel 2023-06-07T15:22:46,856 Building wheel for xalign (setup.py): finished with status 'done' 2023-06-07T15:22:47,041 Created wheel for xalign: filename=xalign-0.1.73-py3-none-any.whl size=6052408 sha256=10544edaa8101f86acc69497358615d92c69ad66a7f0ad9adcb8723a96cee18b 2023-06-07T15:22:47,044 Stored in directory: /tmp/pip-ephem-wheel-cache-tbdjka_5/wheels/9b/3e/04/a2f9ca7f3114a7b14e31d6fca18c648e034a2c8dd7c8d3d608 2023-06-07T15:22:47,078 Successfully built xalign 2023-06-07T15:22:47,513 Removed build tracker: '/tmp/pip-build-tracker-xrhtjhun'