2023-06-09T14:45:12,904 Created temporary directory: /tmp/pip-build-tracker-k8p1dce7
2023-06-09T14:45:12,907 Initialized build tracking at /tmp/pip-build-tracker-k8p1dce7
2023-06-09T14:45:12,907 Created build tracker: /tmp/pip-build-tracker-k8p1dce7
2023-06-09T14:45:12,907 Entered build tracker: /tmp/pip-build-tracker-k8p1dce7
2023-06-09T14:45:12,909 Created temporary directory: /tmp/pip-wheel-7rwf7qve
2023-06-09T14:45:12,917 Created temporary directory: /tmp/pip-ephem-wheel-cache-xzlv2y6n
2023-06-09T14:45:12,969 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-09T14:45:12,977 2 location(s) to search for versions of xalign:
2023-06-09T14:45:12,977 * https://pypi.org/simple/xalign/
2023-06-09T14:45:12,977 * https://www.piwheels.org/simple/xalign/
2023-06-09T14:45:12,978 Fetching project page and analyzing links: https://pypi.org/simple/xalign/
2023-06-09T14:45:12,979 Getting page https://pypi.org/simple/xalign/
2023-06-09T14:45:12,984 Found index url https://pypi.org/simple/
2023-06-09T14:45:13,184 Fetched page https://pypi.org/simple/xalign/ as application/vnd.pypi.simple.v1+json
2023-06-09T14:45:13,187   Found link https://files.pythonhosted.org/packages/93/97/5b42679e7047ebbcef12812c134a669e9eecbd9b01b30eda93b45ec2647e/xalign-0.1.73.tar.gz (from https://pypi.org/simple/xalign/) (requires-python:>=3.6), version: 0.1.73
2023-06-09T14:45:13,189   Found link https://files.pythonhosted.org/packages/f6/79/822e98e6ef0670a245f39338196c73b416b0fc5f63460fa7fba7d0b07b35/xalign-0.1.74.tar.gz (from https://pypi.org/simple/xalign/) (requires-python:>=3.6), version: 0.1.74
2023-06-09T14:45:13,190 Fetching project page and analyzing links: https://www.piwheels.org/simple/xalign/
2023-06-09T14:45:13,190 Getting page https://www.piwheels.org/simple/xalign/
2023-06-09T14:45:13,193 Found index url https://www.piwheels.org/simple/
2023-06-09T14:45:13,717 Fetched page https://www.piwheels.org/simple/xalign/ as text/html
2023-06-09T14:45:13,720   Skipping link: No binaries permitted for xalign: https://www.piwheels.org/simple/xalign/xalign-0.1.73-py3-none-any.whl#sha256=10544edaa8101f86acc69497358615d92c69ad66a7f0ad9adcb8723a96cee18b (from https://www.piwheels.org/simple/xalign/) (requires-python:>=3.6)
2023-06-09T14:45:13,720 Skipping link: not a file: https://www.piwheels.org/simple/xalign/
2023-06-09T14:45:13,721 Skipping link: not a file: https://pypi.org/simple/xalign/
2023-06-09T14:45:13,753 Given no hashes to check 1 links for project 'xalign': discarding no candidates
2023-06-09T14:45:13,784 Collecting xalign==0.1.74
2023-06-09T14:45:13,788   Created temporary directory: /tmp/pip-unpack-bujk3_vv
2023-06-09T14:45:14,066   Downloading xalign-0.1.74.tar.gz (6.1 MB)
2023-06-09T14:45:16,176   Added xalign==0.1.74 from https://files.pythonhosted.org/packages/f6/79/822e98e6ef0670a245f39338196c73b416b0fc5f63460fa7fba7d0b07b35/xalign-0.1.74.tar.gz to build tracker '/tmp/pip-build-tracker-k8p1dce7'
2023-06-09T14:45:16,179   Running setup.py (path:/tmp/pip-wheel-7rwf7qve/xalign_d606cc3abd894b95a75457c6d4c9e356/setup.py) egg_info for package xalign
2023-06-09T14:45:16,181   Created temporary directory: /tmp/pip-pip-egg-info-o8_qb3dh
2023-06-09T14:45:16,181   Preparing metadata (setup.py): started
2023-06-09T14:45:16,183   Running command python setup.py egg_info
2023-06-09T14:45:17,666   running egg_info
2023-06-09T14:45:17,668   creating /tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info
2023-06-09T14:45:17,733   writing /tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/PKG-INFO
2023-06-09T14:45:17,738   writing dependency_links to /tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/dependency_links.txt
2023-06-09T14:45:17,743   writing requirements to /tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/requires.txt
2023-06-09T14:45:17,745   writing top-level names to /tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/top_level.txt
2023-06-09T14:45:17,748   writing manifest file '/tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/SOURCES.txt'
2023-06-09T14:45:17,948   reading manifest file '/tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/SOURCES.txt'
2023-06-09T14:45:17,952   reading manifest template 'MANIFEST.in'
2023-06-09T14:45:17,954   warning: manifest_maker: MANIFEST.in, line 1: 'recursive-include' expects <dir> <pattern1> <pattern2> ...

2023-06-09T14:45:17,956   warning: no previously-included files matching '*fastq.gz' found anywhere in distribution
2023-06-09T14:45:17,958   warning: no previously-included files matching '*kallisto.tar.gz' found anywhere in distribution
2023-06-09T14:45:17,959   warning: no previously-included files matching '*ids.json' found anywhere in distribution
2023-06-09T14:45:17,960   adding license file 'LICENSE'
2023-06-09T14:45:17,964   writing manifest file '/tmp/pip-pip-egg-info-o8_qb3dh/xalign.egg-info/SOURCES.txt'
2023-06-09T14:45:18,085   Preparing metadata (setup.py): finished with status 'done'
2023-06-09T14:45:18,098   Source in /tmp/pip-wheel-7rwf7qve/xalign_d606cc3abd894b95a75457c6d4c9e356 has version 0.1.74, which satisfies requirement xalign==0.1.74 from https://files.pythonhosted.org/packages/f6/79/822e98e6ef0670a245f39338196c73b416b0fc5f63460fa7fba7d0b07b35/xalign-0.1.74.tar.gz
2023-06-09T14:45:18,100   Removed xalign==0.1.74 from https://files.pythonhosted.org/packages/f6/79/822e98e6ef0670a245f39338196c73b416b0fc5f63460fa7fba7d0b07b35/xalign-0.1.74.tar.gz from build tracker '/tmp/pip-build-tracker-k8p1dce7'
2023-06-09T14:45:18,116 Created temporary directory: /tmp/pip-unpack-0mkyy4ts
2023-06-09T14:45:18,117 Building wheels for collected packages: xalign
2023-06-09T14:45:18,125   Created temporary directory: /tmp/pip-wheel-m4yinyqu
2023-06-09T14:45:18,126   Building wheel for xalign (setup.py): started
2023-06-09T14:45:18,128   Destination directory: /tmp/pip-wheel-m4yinyqu
2023-06-09T14:45:18,129   Running command python setup.py bdist_wheel
2023-06-09T14:45:19,914   running bdist_wheel
2023-06-09T14:45:20,621   running build
2023-06-09T14:45:20,622   running build_py
2023-06-09T14:45:20,698   creating build
2023-06-09T14:45:20,699   creating build/lib
2023-06-09T14:45:20,700   creating build/lib/xalign
2023-06-09T14:45:20,702   copying xalign/__init__.py -> build/lib/xalign
2023-06-09T14:45:20,707   copying xalign/utils.py -> build/lib/xalign
2023-06-09T14:45:20,711   copying xalign/sra.py -> build/lib/xalign
2023-06-09T14:45:20,715   copying xalign/file.py -> build/lib/xalign
2023-06-09T14:45:20,719   copying xalign/ensembl.py -> build/lib/xalign
2023-06-09T14:45:20,722   running egg_info
2023-06-09T14:45:20,870   writing xalign.egg-info/PKG-INFO
2023-06-09T14:45:20,875   writing dependency_links to xalign.egg-info/dependency_links.txt
2023-06-09T14:45:20,879   writing requirements to xalign.egg-info/requires.txt
2023-06-09T14:45:20,882   writing top-level names to xalign.egg-info/top_level.txt
2023-06-09T14:45:20,954   reading manifest file 'xalign.egg-info/SOURCES.txt'
2023-06-09T14:45:20,958   reading manifest template 'MANIFEST.in'
2023-06-09T14:45:20,960   warning: manifest_maker: MANIFEST.in, line 1: 'recursive-include' expects <dir> <pattern1> <pattern2> ...

2023-06-09T14:45:20,963   warning: no previously-included files matching '*fastq.gz' found anywhere in distribution
2023-06-09T14:45:20,964   warning: no previously-included files matching '*kallisto.tar.gz' found anywhere in distribution
2023-06-09T14:45:20,966   warning: no previously-included files matching '*ids.json' found anywhere in distribution
2023-06-09T14:45:20,966   adding license file 'LICENSE'
2023-06-09T14:45:20,972   writing manifest file 'xalign.egg-info/SOURCES.txt'
2023-06-09T14:45:20,977   /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'xalign.data' is absent from the `packages` configuration.
2023-06-09T14:45:20,977   !!

2023-06-09T14:45:20,978           ********************************************************************************
2023-06-09T14:45:20,978           ############################
2023-06-09T14:45:20,979           # Package would be ignored #
2023-06-09T14:45:20,979           ############################
2023-06-09T14:45:20,979           Python recognizes 'xalign.data' as an importable package[^1],
2023-06-09T14:45:20,980           but it is absent from setuptools' `packages` configuration.

2023-06-09T14:45:20,980           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-09T14:45:20,981           package, please make sure that 'xalign.data' is explicitly added
2023-06-09T14:45:20,981           to the `packages` configuration field.

2023-06-09T14:45:20,982           Alternatively, you can also rely on setuptools' discovery methods
2023-06-09T14:45:20,982           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-09T14:45:20,982           instead of `find_packages(...)`/`find:`).

2023-06-09T14:45:20,983           You can read more about "package discovery" on setuptools documentation page:

2023-06-09T14:45:20,984           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-09T14:45:20,984           If you don't want 'xalign.data' to be distributed and are
2023-06-09T14:45:20,985           already explicitly excluding 'xalign.data' via
2023-06-09T14:45:20,985           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-09T14:45:20,985           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-09T14:45:20,986           combination with a more fine grained `package-data` configuration.

2023-06-09T14:45:20,986           You can read more about "package data files" on setuptools documentation page:

2023-06-09T14:45:20,987           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-09T14:45:20,988           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-09T14:45:20,988                 even if it does not contain any `.py` files.
2023-06-09T14:45:20,989                 On the other hand, currently there is no concept of package data
2023-06-09T14:45:20,989                 directory, all directories are treated like packages.
2023-06-09T14:45:20,989           ********************************************************************************

2023-06-09T14:45:20,990   !!
2023-06-09T14:45:20,990     check.warn(importable)
2023-06-09T14:45:20,991   creating build/lib/xalign/data
2023-06-09T14:45:20,991   copying xalign/data/config.json -> build/lib/xalign/data
2023-06-09T14:45:20,991   copying xalign/data/fasterq-dump.tar.gz -> build/lib/xalign/data
2023-06-09T14:45:21,109   copying xalign/data/fasterq.tar.gz -> build/lib/xalign/data
2023-06-09T14:45:21,400   /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-06-09T14:45:21,401   !!

2023-06-09T14:45:21,402           ********************************************************************************
2023-06-09T14:45:21,402           Please avoid running ``setup.py`` directly.
2023-06-09T14:45:21,402           Instead, use pypa/build, pypa/installer, pypa/build or
2023-06-09T14:45:21,403           other standards-based tools.

2023-06-09T14:45:21,403           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-06-09T14:45:21,404           ********************************************************************************

2023-06-09T14:45:21,404   !!
2023-06-09T14:45:21,405     self.initialize_options()
2023-06-09T14:45:21,466   installing to build/bdist.linux-armv7l/wheel
2023-06-09T14:45:21,467   running install
2023-06-09T14:45:21,527   running install_lib
2023-06-09T14:45:21,597   creating build/bdist.linux-armv7l
2023-06-09T14:45:21,598   creating build/bdist.linux-armv7l/wheel
2023-06-09T14:45:21,602   creating build/bdist.linux-armv7l/wheel/xalign
2023-06-09T14:45:21,604   copying build/lib/xalign/__init__.py -> build/bdist.linux-armv7l/wheel/xalign
2023-06-09T14:45:21,609   copying build/lib/xalign/utils.py -> build/bdist.linux-armv7l/wheel/xalign
2023-06-09T14:45:21,612   copying build/lib/xalign/sra.py -> build/bdist.linux-armv7l/wheel/xalign
2023-06-09T14:45:21,616   copying build/lib/xalign/file.py -> build/bdist.linux-armv7l/wheel/xalign
2023-06-09T14:45:21,620   copying build/lib/xalign/ensembl.py -> build/bdist.linux-armv7l/wheel/xalign
2023-06-09T14:45:21,625   creating build/bdist.linux-armv7l/wheel/xalign/data
2023-06-09T14:45:21,627   copying build/lib/xalign/data/fasterq-dump.tar.gz -> build/bdist.linux-armv7l/wheel/xalign/data
2023-06-09T14:45:21,739   copying build/lib/xalign/data/fasterq.tar.gz -> build/bdist.linux-armv7l/wheel/xalign/data
2023-06-09T14:45:21,947   copying build/lib/xalign/data/config.json -> build/bdist.linux-armv7l/wheel/xalign/data
2023-06-09T14:45:21,951   running install_egg_info
2023-06-09T14:45:22,028   Copying xalign.egg-info to build/bdist.linux-armv7l/wheel/xalign-0.1.74-py3.7.egg-info
2023-06-09T14:45:22,048   running install_scripts
2023-06-09T14:45:22,083   creating build/bdist.linux-armv7l/wheel/xalign-0.1.74.dist-info/WHEEL
2023-06-09T14:45:22,089   creating '/tmp/pip-wheel-m4yinyqu/xalign-0.1.74-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-09T14:45:22,096   adding 'xalign/__init__.py'
2023-06-09T14:45:22,100   adding 'xalign/ensembl.py'
2023-06-09T14:45:22,103   adding 'xalign/file.py'
2023-06-09T14:45:22,106   adding 'xalign/sra.py'
2023-06-09T14:45:22,109   adding 'xalign/utils.py'
2023-06-09T14:45:22,112   adding 'xalign/data/config.json'
2023-06-09T14:45:22,669   adding 'xalign/data/fasterq-dump.tar.gz'
2023-06-09T14:45:23,870   adding 'xalign/data/fasterq.tar.gz'
2023-06-09T14:45:23,968   adding 'xalign-0.1.74.dist-info/LICENSE'
2023-06-09T14:45:23,973   adding 'xalign-0.1.74.dist-info/METADATA'
2023-06-09T14:45:23,975   adding 'xalign-0.1.74.dist-info/WHEEL'
2023-06-09T14:45:23,977   adding 'xalign-0.1.74.dist-info/top_level.txt'
2023-06-09T14:45:23,979   adding 'xalign-0.1.74.dist-info/RECORD'
2023-06-09T14:45:24,203   removing build/bdist.linux-armv7l/wheel
2023-06-09T14:45:24,372   Building wheel for xalign (setup.py): finished with status 'done'
2023-06-09T14:45:24,557   Created wheel for xalign: filename=xalign-0.1.74-py3-none-any.whl size=6053271 sha256=3abc9bd63f1d6ebb5f4f94fca5d03532821e9a1dcff8646da2b72b330f15f373
2023-06-09T14:45:24,560   Stored in directory: /tmp/pip-ephem-wheel-cache-xzlv2y6n/wheels/6b/e6/ec/1f77046dda9529997d77c9d0b962be19ff16f281232d23e07d
2023-06-09T14:45:24,594 Successfully built xalign
2023-06-09T14:45:25,027 Removed build tracker: '/tmp/pip-build-tracker-k8p1dce7'