2023-06-11T18:40:46,360 Created temporary directory: /tmp/pip-build-tracker-nqtkvczz 2023-06-11T18:40:46,363 Initialized build tracking at /tmp/pip-build-tracker-nqtkvczz 2023-06-11T18:40:46,363 Created build tracker: /tmp/pip-build-tracker-nqtkvczz 2023-06-11T18:40:46,364 Entered build tracker: /tmp/pip-build-tracker-nqtkvczz 2023-06-11T18:40:46,365 Created temporary directory: /tmp/pip-wheel-o5x0s301 2023-06-11T18:40:46,374 Created temporary directory: /tmp/pip-ephem-wheel-cache-2jsj39nr 2023-06-11T18:40:46,426 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-11T18:40:46,434 2 location(s) to search for versions of mmcif-utils: 2023-06-11T18:40:46,434 * https://pypi.org/simple/mmcif-utils/ 2023-06-11T18:40:46,434 * https://www.piwheels.org/simple/mmcif-utils/ 2023-06-11T18:40:46,435 Fetching project page and analyzing links: https://pypi.org/simple/mmcif-utils/ 2023-06-11T18:40:46,436 Getting page https://pypi.org/simple/mmcif-utils/ 2023-06-11T18:40:46,441 Found index url https://pypi.org/simple/ 2023-06-11T18:40:46,636 Fetched page https://pypi.org/simple/mmcif-utils/ as application/vnd.pypi.simple.v1+json 2023-06-11T18:40:46,644 Found link https://files.pythonhosted.org/packages/f3/80/dff5ede1197bfbb9d50741dc973e052961d3c4457c152b13c5349fb59855/mmcif.utils-0.10.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.10 2023-06-11T18:40:46,645 Found link https://files.pythonhosted.org/packages/c7/62/6f15b693673283c3b68c35435e0df4d1b9d98b73a5be5ebabf1f2c1b06f1/mmcif.utils-0.11.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.11 2023-06-11T18:40:46,646 Found link https://files.pythonhosted.org/packages/41/61/30428632dbce0f248e713ec65284af17cbe240cfb1cd3216cbd89bfcd92f/mmcif.utils-0.12.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.12 2023-06-11T18:40:46,647 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/a3/d6/13917debe76d604fe8b6227079b193eec57275f17a914351b4324f0b5bd9/mmcif.utils-0.13-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2023-06-11T18:40:46,647 Found link https://files.pythonhosted.org/packages/31/85/65b76a958d6738629ca31fc2f6271a71247ba8177c18ccbc68c14c34fe62/mmcif.utils-0.13.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.13 2023-06-11T18:40:46,648 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/d7/b4/15b4f49d3c00b9e2235ac12299d45ad3ac52d907eaf3a18f941b86b89a33/mmcif.utils-0.14-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2023-06-11T18:40:46,648 Found link https://files.pythonhosted.org/packages/58/ff/5cd18cad301818120644d408649b210117951378487a195afa570971d3c9/mmcif.utils-0.14.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.14 2023-06-11T18:40:46,649 Found link https://files.pythonhosted.org/packages/09/79/8e5e1a5d01b864d56266f6a327f3bc8822033d9077d3d4f276334b4d341a/mmcif.utils-0.20.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.20 2023-06-11T18:40:46,650 Found link https://files.pythonhosted.org/packages/3d/9c/104dce7f143aecf8eac24ef6cee95dee002f62388777f8ac9d69f08cabde/mmcif.utils-0.21.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.21 2023-06-11T18:40:46,651 Found link https://files.pythonhosted.org/packages/da/df/92ac16434b0cac9df602f0e15172e5b76f45a012d7bc40b3f69703faa459/mmcif.utils-0.22.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.22 2023-06-11T18:40:46,651 Found link https://files.pythonhosted.org/packages/19/67/1d6c70f129b2a04bfde6287bf3303463d80061f93ac967d64a2685a37401/mmcif.utils-0.24.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.24 2023-06-11T18:40:46,652 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/95/89/9d84de63b25907a20ada59f5a91988e3dc63fb083a15ff9c2791a6ae7e63/mmcif.utils-0.25-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2023-06-11T18:40:46,652 Found link https://files.pythonhosted.org/packages/25/cf/493c53bb71f23b7a668c4ec0c3af4d43596dca38305102cd5ec9f800aae7/mmcif.utils-0.25.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.25 2023-06-11T18:40:46,653 Found link https://files.pythonhosted.org/packages/19/23/e8cc30c5e8a38f3c3d1c238d68bf341b368151f7183b6d5a1c13f1c5f834/mmcif.utils-0.26.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.26 2023-06-11T18:40:46,654 Fetching project page and analyzing links: https://www.piwheels.org/simple/mmcif-utils/ 2023-06-11T18:40:46,655 Getting page https://www.piwheels.org/simple/mmcif-utils/ 2023-06-11T18:40:46,657 Found index url https://www.piwheels.org/simple/ 2023-06-11T18:40:46,892 Fetched page https://www.piwheels.org/simple/mmcif-utils/ as text/html 2023-06-11T18:40:46,901 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.25-py2.py3-none-any.whl#sha256=b12500e2bcf2878ce6fac1c7d15678320f93c23e4da777e0da5b24fe1e50915f (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,902 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.24-py2.py3-none-any.whl#sha256=457d40415845bfa576a825dfe5dd1c3fef6ddf06b3bd041255ba408ec2e52b69 (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,902 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.22-py2.py3-none-any.whl#sha256=515d5119f554d4b5af461af196a5378a04b89511f45a6d970ae8db7ab6c5288f (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,903 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.21-py2.py3-none-any.whl#sha256=c377a321ab25586be861c16db0c1368df1a4d01a874e8d0113cdd9f9d9aee075 (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,903 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.20-py2.py3-none-any.whl#sha256=fc5ade185cdd8730fbf2279613dcca175d9085f3461463494b1a21d11246eadb (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,903 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.14-py2.py3-none-any.whl#sha256=72716761c55baf4ef0eff67ae7cd7eb66d4885e5e0c61e3d1eb54a8f9845e60b (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,904 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.13-py2.py3-none-any.whl#sha256=cae721e88ed4c82357ab7769f3edc4f649143fba7ad066bcd6961f532376e8e2 (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,904 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.12-py2.py3-none-any.whl#sha256=d47d9adb052c279e85d6ec1be90c8304d430dd7d7a22c3fffcfb84dbd5b1ced5 (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,905 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.11-py3-none-any.whl#sha256=f6adc078dfd88b38731c56a9821d86c37990dc5ff0ee0cb08e0ac4cfe57f4e38 (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,905 Skipping link: No binaries permitted for mmcif-utils: https://www.piwheels.org/simple/mmcif-utils/mmcif.utils-0.10-py3-none-any.whl#sha256=7dd4286bd5940472372cb5ccb64df4fcf6a466d16c0ad621df9290dab1c0b276 (from https://www.piwheels.org/simple/mmcif-utils/) 2023-06-11T18:40:46,906 Skipping link: not a file: https://www.piwheels.org/simple/mmcif-utils/ 2023-06-11T18:40:46,906 Skipping link: not a file: https://pypi.org/simple/mmcif-utils/ 2023-06-11T18:40:46,943 Given no hashes to check 1 links for project 'mmcif-utils': discarding no candidates 2023-06-11T18:40:46,974 Collecting mmcif-utils==0.26 2023-06-11T18:40:46,979 Created temporary directory: /tmp/pip-unpack-dcjjfg1b 2023-06-11T18:40:47,180 Downloading mmcif.utils-0.26.tar.gz (91 kB) 2023-06-11T18:40:47,596 Added mmcif-utils==0.26 from https://files.pythonhosted.org/packages/19/23/e8cc30c5e8a38f3c3d1c238d68bf341b368151f7183b6d5a1c13f1c5f834/mmcif.utils-0.26.tar.gz to build tracker '/tmp/pip-build-tracker-nqtkvczz' 2023-06-11T18:40:47,599 Running setup.py (path:/tmp/pip-wheel-o5x0s301/mmcif-utils_3864bb93368b47aea9aa4541ae133b63/setup.py) egg_info for package mmcif-utils 2023-06-11T18:40:47,600 Created temporary directory: /tmp/pip-pip-egg-info-2i0ujnx0 2023-06-11T18:40:47,601 Preparing metadata (setup.py): started 2023-06-11T18:40:47,604 Running command python setup.py egg_info 2023-06-11T18:40:48,898 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-06-11T18:40:48,900 !! 2023-06-11T18:40:48,900 ******************************************************************************** 2023-06-11T18:40:48,901 Usage of dash-separated 'description-file' will not be supported in future 2023-06-11T18:40:48,901 versions. Please use the underscore name 'description_file' instead. 2023-06-11T18:40:48,902 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-06-11T18:40:48,902 or your builds will no longer be supported. 2023-06-11T18:40:48,903 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-06-11T18:40:48,903 ******************************************************************************** 2023-06-11T18:40:48,904 !! 2023-06-11T18:40:48,904 opt = self.warn_dash_deprecation(opt, section) 2023-06-11T18:40:48,904 Warning: 'classifiers' should be a list, got type 'tuple' 2023-06-11T18:40:49,164 running egg_info 2023-06-11T18:40:49,167 creating /tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info 2023-06-11T18:40:49,233 writing /tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/PKG-INFO 2023-06-11T18:40:49,238 writing dependency_links to /tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/dependency_links.txt 2023-06-11T18:40:49,243 writing requirements to /tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/requires.txt 2023-06-11T18:40:49,246 writing top-level names to /tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/top_level.txt 2023-06-11T18:40:49,249 writing manifest file '/tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/SOURCES.txt' 2023-06-11T18:40:49,489 reading manifest file '/tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/SOURCES.txt' 2023-06-11T18:40:49,492 reading manifest template 'MANIFEST.in' 2023-06-11T18:40:49,496 warning: no previously-included files matching '*' found under directory 'mmcif_utils/tests' 2023-06-11T18:40:49,496 adding license file 'LICENSE' 2023-06-11T18:40:49,506 writing manifest file '/tmp/pip-pip-egg-info-2i0ujnx0/mmcif.utils.egg-info/SOURCES.txt' 2023-06-11T18:40:49,627 Preparing metadata (setup.py): finished with status 'done' 2023-06-11T18:40:49,640 Source in /tmp/pip-wheel-o5x0s301/mmcif-utils_3864bb93368b47aea9aa4541ae133b63 has version 0.26, which satisfies requirement mmcif-utils==0.26 from https://files.pythonhosted.org/packages/19/23/e8cc30c5e8a38f3c3d1c238d68bf341b368151f7183b6d5a1c13f1c5f834/mmcif.utils-0.26.tar.gz 2023-06-11T18:40:49,642 Removed mmcif-utils==0.26 from https://files.pythonhosted.org/packages/19/23/e8cc30c5e8a38f3c3d1c238d68bf341b368151f7183b6d5a1c13f1c5f834/mmcif.utils-0.26.tar.gz from build tracker '/tmp/pip-build-tracker-nqtkvczz' 2023-06-11T18:40:49,652 Created temporary directory: /tmp/pip-unpack-ltckijih 2023-06-11T18:40:49,653 Building wheels for collected packages: mmcif-utils 2023-06-11T18:40:49,662 Created temporary directory: /tmp/pip-wheel-4q487v4r 2023-06-11T18:40:49,662 Building wheel for mmcif-utils (setup.py): started 2023-06-11T18:40:49,664 Destination directory: /tmp/pip-wheel-4q487v4r 2023-06-11T18:40:49,665 Running command python setup.py bdist_wheel 2023-06-11T18:40:50,844 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-06-11T18:40:50,845 !! 2023-06-11T18:40:50,846 ******************************************************************************** 2023-06-11T18:40:50,846 Usage of dash-separated 'description-file' will not be supported in future 2023-06-11T18:40:50,847 versions. Please use the underscore name 'description_file' instead. 2023-06-11T18:40:50,847 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-06-11T18:40:50,848 or your builds will no longer be supported. 2023-06-11T18:40:50,848 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-06-11T18:40:50,849 ******************************************************************************** 2023-06-11T18:40:50,849 !! 2023-06-11T18:40:50,849 opt = self.warn_dash_deprecation(opt, section) 2023-06-11T18:40:50,928 Warning: 'classifiers' should be a list, got type 'tuple' 2023-06-11T18:40:51,262 running bdist_wheel 2023-06-11T18:40:51,978 running build 2023-06-11T18:40:51,978 running build_py 2023-06-11T18:40:52,052 creating build 2023-06-11T18:40:52,053 creating build/lib 2023-06-11T18:40:52,054 creating build/lib/mmcif_utils 2023-06-11T18:40:52,057 copying mmcif_utils/__init__.py -> build/lib/mmcif_utils 2023-06-11T18:40:52,063 creating build/lib/mmcif_utils/inventory 2023-06-11T18:40:52,065 copying mmcif_utils/inventory/InventoryIoBatchRunner.py -> build/lib/mmcif_utils/inventory 2023-06-11T18:40:52,070 copying mmcif_utils/inventory/__init__.py -> build/lib/mmcif_utils/inventory 2023-06-11T18:40:52,074 copying mmcif_utils/inventory/InventoryIo.py -> build/lib/mmcif_utils/inventory 2023-06-11T18:40:52,080 creating build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,082 copying mmcif_utils/pdb/__init__.py -> build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,087 copying mmcif_utils/pdb/PdbxConnect.py -> build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,093 copying mmcif_utils/pdb/PdbxConnectTests.py -> build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,097 copying mmcif_utils/pdb/PdbxVersion.py -> build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,101 copying mmcif_utils/pdb/PdbxAnnFeature.py -> build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,106 copying mmcif_utils/pdb/PdbxAtomSite.py -> build/lib/mmcif_utils/pdb 2023-06-11T18:40:52,113 creating build/lib/mmcif_utils/bird 2023-06-11T18:40:52,115 copying mmcif_utils/bird/PdbxPrdIo.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,119 copying mmcif_utils/bird/__init__.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,123 copying mmcif_utils/bird/PdbxBirdIndex.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,127 copying mmcif_utils/bird/PdbxFamilyIo.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,131 copying mmcif_utils/bird/PdbxPrdCcIo.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,136 copying mmcif_utils/bird/PdbxPrd.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,141 copying mmcif_utils/bird/PdbxPrdUtils.py -> build/lib/mmcif_utils/bird 2023-06-11T18:40:52,149 creating build/lib/mmcif_utils/style 2023-06-11T18:40:52,152 copying mmcif_utils/style/PdbxMessageCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,157 copying mmcif_utils/style/ChemCompCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,162 copying mmcif_utils/style/PdbxGeometryReportCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,168 copying mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,173 copying mmcif_utils/style/__init__.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,177 copying mmcif_utils/style/PdbxEntryInfoCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,183 copying mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,188 copying mmcif_utils/style/PdbxCategoryStyleBase.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,193 copying mmcif_utils/style/PdbxReportCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,202 copying mmcif_utils/style/PdbxItemMappingCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,206 copying mmcif_utils/style/PdbxStyleIoUtil.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,213 copying mmcif_utils/style/make-style-from-item-list.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,217 copying mmcif_utils/style/PrdCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,222 copying mmcif_utils/style/ChemCompModelCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,227 copying mmcif_utils/style/PdbxEmExtensionCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,234 copying mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,239 copying mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py -> build/lib/mmcif_utils/style 2023-06-11T18:40:52,244 creating build/lib/mmcif_utils/persist 2023-06-11T18:40:52,246 copying mmcif_utils/persist/PdbxPersist.py -> build/lib/mmcif_utils/persist 2023-06-11T18:40:52,252 copying mmcif_utils/persist/PdbxDictionaryInfo.py -> build/lib/mmcif_utils/persist 2023-06-11T18:40:52,258 copying mmcif_utils/persist/__init__.py -> build/lib/mmcif_utils/persist 2023-06-11T18:40:52,262 copying mmcif_utils/persist/LockFile.py -> build/lib/mmcif_utils/persist 2023-06-11T18:40:52,265 copying mmcif_utils/persist/PdbxPyIoAdapter.py -> build/lib/mmcif_utils/persist 2023-06-11T18:40:52,270 copying mmcif_utils/persist/PdbxCoreIoAdapter.py -> build/lib/mmcif_utils/persist 2023-06-11T18:40:52,276 creating build/lib/mmcif_utils/trans 2023-06-11T18:40:52,277 copying mmcif_utils/trans/__init__.py -> build/lib/mmcif_utils/trans 2023-06-11T18:40:52,281 copying mmcif_utils/trans/DictionaryMapper.py -> build/lib/mmcif_utils/trans 2023-06-11T18:40:52,286 copying mmcif_utils/trans/InstanceMapper.py -> build/lib/mmcif_utils/trans 2023-06-11T18:40:52,291 copying mmcif_utils/trans/FilterCif.py -> build/lib/mmcif_utils/trans 2023-06-11T18:40:52,296 copying mmcif_utils/trans/DictionaryMapperIo.py -> build/lib/mmcif_utils/trans 2023-06-11T18:40:52,301 creating build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,303 copying mmcif_utils/chemcomp/__init__.py -> build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,306 copying mmcif_utils/chemcomp/PdbxChemComp.py -> build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,311 copying mmcif_utils/chemcomp/PdbxChemCompUtils.py -> build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,316 copying mmcif_utils/chemcomp/PdbxChemCompModel.py -> build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,321 copying mmcif_utils/chemcomp/PdbxChemCompIo.py -> build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,325 copying mmcif_utils/chemcomp/PdbxChemCompModelIo.py -> build/lib/mmcif_utils/chemcomp 2023-06-11T18:40:52,330 creating build/lib/mmcif_utils/message 2023-06-11T18:40:52,332 copying mmcif_utils/message/__init__.py -> build/lib/mmcif_utils/message 2023-06-11T18:40:52,335 copying mmcif_utils/message/PdbxMessage.py -> build/lib/mmcif_utils/message 2023-06-11T18:40:52,340 copying mmcif_utils/message/PdbxMessageIo.py -> build/lib/mmcif_utils/message 2023-06-11T18:40:52,345 creating build/lib/mmcif_utils/pdbx 2023-06-11T18:40:52,347 copying mmcif_utils/pdbx/__init__.py -> build/lib/mmcif_utils/pdbx 2023-06-11T18:40:52,350 copying mmcif_utils/pdbx/PdbxIo.py -> build/lib/mmcif_utils/pdbx 2023-06-11T18:40:52,357 creating build/lib/mmcif_utils/bird/cl 2023-06-11T18:40:52,359 copying mmcif_utils/bird/cl/__init__.py -> build/lib/mmcif_utils/bird/cl 2023-06-11T18:40:52,362 copying mmcif_utils/bird/cl/PdbxPrdExec.py -> build/lib/mmcif_utils/bird/cl 2023-06-11T18:40:52,477 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-11T18:40:52,478 !! 2023-06-11T18:40:52,479 ******************************************************************************** 2023-06-11T18:40:52,479 Please avoid running ``setup.py`` directly. 2023-06-11T18:40:52,479 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-11T18:40:52,480 other standards-based tools. 2023-06-11T18:40:52,480 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-11T18:40:52,481 ******************************************************************************** 2023-06-11T18:40:52,482 !! 2023-06-11T18:40:52,482 self.initialize_options() 2023-06-11T18:40:52,545 installing to build/bdist.linux-armv7l/wheel 2023-06-11T18:40:52,546 running install 2023-06-11T18:40:52,606 running install_lib 2023-06-11T18:40:52,676 creating build/bdist.linux-armv7l 2023-06-11T18:40:52,677 creating build/bdist.linux-armv7l/wheel 2023-06-11T18:40:52,680 creating build/bdist.linux-armv7l/wheel/mmcif_utils 2023-06-11T18:40:52,684 creating build/bdist.linux-armv7l/wheel/mmcif_utils/inventory 2023-06-11T18:40:52,686 copying build/lib/mmcif_utils/inventory/InventoryIoBatchRunner.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/inventory 2023-06-11T18:40:52,692 copying build/lib/mmcif_utils/inventory/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/inventory 2023-06-11T18:40:52,695 copying build/lib/mmcif_utils/inventory/InventoryIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/inventory 2023-06-11T18:40:52,699 copying build/lib/mmcif_utils/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils 2023-06-11T18:40:52,704 creating build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,706 copying build/lib/mmcif_utils/pdb/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,710 copying build/lib/mmcif_utils/pdb/PdbxConnect.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,715 copying build/lib/mmcif_utils/pdb/PdbxConnectTests.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,719 copying build/lib/mmcif_utils/pdb/PdbxVersion.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,724 copying build/lib/mmcif_utils/pdb/PdbxAnnFeature.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,729 copying build/lib/mmcif_utils/pdb/PdbxAtomSite.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2023-06-11T18:40:52,735 creating build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,737 copying build/lib/mmcif_utils/bird/PdbxPrdIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,742 copying build/lib/mmcif_utils/bird/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,745 copying build/lib/mmcif_utils/bird/PdbxBirdIndex.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,749 copying build/lib/mmcif_utils/bird/PdbxFamilyIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,754 copying build/lib/mmcif_utils/bird/PdbxPrdCcIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,759 copying build/lib/mmcif_utils/bird/PdbxPrd.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,765 creating build/bdist.linux-armv7l/wheel/mmcif_utils/bird/cl 2023-06-11T18:40:52,766 copying build/lib/mmcif_utils/bird/cl/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird/cl 2023-06-11T18:40:52,770 copying build/lib/mmcif_utils/bird/cl/PdbxPrdExec.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird/cl 2023-06-11T18:40:52,775 copying build/lib/mmcif_utils/bird/PdbxPrdUtils.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2023-06-11T18:40:52,783 creating build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,784 copying build/lib/mmcif_utils/style/PdbxMessageCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,789 copying build/lib/mmcif_utils/style/ChemCompCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,794 copying build/lib/mmcif_utils/style/PdbxGeometryReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,798 copying build/lib/mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,802 copying build/lib/mmcif_utils/style/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,805 copying build/lib/mmcif_utils/style/PdbxEntryInfoCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,810 copying build/lib/mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,815 copying build/lib/mmcif_utils/style/PdbxCategoryStyleBase.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,819 copying build/lib/mmcif_utils/style/PdbxReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,828 copying build/lib/mmcif_utils/style/PdbxItemMappingCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,832 copying build/lib/mmcif_utils/style/PdbxStyleIoUtil.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,838 copying build/lib/mmcif_utils/style/make-style-from-item-list.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,842 copying build/lib/mmcif_utils/style/PrdCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,847 copying build/lib/mmcif_utils/style/ChemCompModelCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,851 copying build/lib/mmcif_utils/style/PdbxEmExtensionCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,858 copying build/lib/mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,862 copying build/lib/mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/style 2023-06-11T18:40:52,866 creating build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,868 copying build/lib/mmcif_utils/persist/PdbxPersist.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,874 copying build/lib/mmcif_utils/persist/PdbxDictionaryInfo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,881 copying build/lib/mmcif_utils/persist/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,884 copying build/lib/mmcif_utils/persist/LockFile.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,888 copying build/lib/mmcif_utils/persist/PdbxPyIoAdapter.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,892 copying build/lib/mmcif_utils/persist/PdbxCoreIoAdapter.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2023-06-11T18:40:52,897 creating build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2023-06-11T18:40:52,899 copying build/lib/mmcif_utils/trans/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2023-06-11T18:40:52,902 copying build/lib/mmcif_utils/trans/DictionaryMapper.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2023-06-11T18:40:52,906 copying build/lib/mmcif_utils/trans/InstanceMapper.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2023-06-11T18:40:52,911 copying build/lib/mmcif_utils/trans/FilterCif.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2023-06-11T18:40:52,915 copying build/lib/mmcif_utils/trans/DictionaryMapperIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2023-06-11T18:40:52,920 creating build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,922 copying build/lib/mmcif_utils/chemcomp/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,925 copying build/lib/mmcif_utils/chemcomp/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,929 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompUtils.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,935 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompModel.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,939 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,943 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompModelIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2023-06-11T18:40:52,948 creating build/bdist.linux-armv7l/wheel/mmcif_utils/message 2023-06-11T18:40:52,949 copying build/lib/mmcif_utils/message/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/message 2023-06-11T18:40:52,952 copying build/lib/mmcif_utils/message/PdbxMessage.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/message 2023-06-11T18:40:52,957 copying build/lib/mmcif_utils/message/PdbxMessageIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/message 2023-06-11T18:40:52,962 creating build/bdist.linux-armv7l/wheel/mmcif_utils/pdbx 2023-06-11T18:40:52,964 copying build/lib/mmcif_utils/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdbx 2023-06-11T18:40:52,967 copying build/lib/mmcif_utils/pdbx/PdbxIo.py -> build/bdist.linux-armv7l/wheel/mmcif_utils/pdbx 2023-06-11T18:40:52,972 running install_egg_info 2023-06-11T18:40:53,130 running egg_info 2023-06-11T18:40:53,193 writing mmcif.utils.egg-info/PKG-INFO 2023-06-11T18:40:53,197 writing dependency_links to mmcif.utils.egg-info/dependency_links.txt 2023-06-11T18:40:53,203 writing requirements to mmcif.utils.egg-info/requires.txt 2023-06-11T18:40:53,206 writing top-level names to mmcif.utils.egg-info/top_level.txt 2023-06-11T18:40:53,307 reading manifest file 'mmcif.utils.egg-info/SOURCES.txt' 2023-06-11T18:40:53,314 reading manifest template 'MANIFEST.in' 2023-06-11T18:40:53,317 warning: no previously-included files matching '*' found under directory 'mmcif_utils/tests' 2023-06-11T18:40:53,318 adding license file 'LICENSE' 2023-06-11T18:40:53,330 writing manifest file 'mmcif.utils.egg-info/SOURCES.txt' 2023-06-11T18:40:53,333 Copying mmcif.utils.egg-info to build/bdist.linux-armv7l/wheel/mmcif.utils-0.26-py3.7.egg-info 2023-06-11T18:40:53,355 running install_scripts 2023-06-11T18:40:53,388 creating build/bdist.linux-armv7l/wheel/mmcif.utils-0.26.dist-info/WHEEL 2023-06-11T18:40:53,393 creating '/tmp/pip-wheel-4q487v4r/mmcif.utils-0.26-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-11T18:40:53,400 adding 'mmcif_utils/__init__.py' 2023-06-11T18:40:53,405 adding 'mmcif_utils/bird/PdbxBirdIndex.py' 2023-06-11T18:40:53,408 adding 'mmcif_utils/bird/PdbxFamilyIo.py' 2023-06-11T18:40:53,412 adding 'mmcif_utils/bird/PdbxPrd.py' 2023-06-11T18:40:53,416 adding 'mmcif_utils/bird/PdbxPrdCcIo.py' 2023-06-11T18:40:53,419 adding 'mmcif_utils/bird/PdbxPrdIo.py' 2023-06-11T18:40:53,424 adding 'mmcif_utils/bird/PdbxPrdUtils.py' 2023-06-11T18:40:53,426 adding 'mmcif_utils/bird/__init__.py' 2023-06-11T18:40:53,433 adding 'mmcif_utils/bird/cl/PdbxPrdExec.py' 2023-06-11T18:40:53,436 adding 'mmcif_utils/bird/cl/__init__.py' 2023-06-11T18:40:53,440 adding 'mmcif_utils/chemcomp/PdbxChemComp.py' 2023-06-11T18:40:53,443 adding 'mmcif_utils/chemcomp/PdbxChemCompIo.py' 2023-06-11T18:40:53,446 adding 'mmcif_utils/chemcomp/PdbxChemCompModel.py' 2023-06-11T18:40:53,449 adding 'mmcif_utils/chemcomp/PdbxChemCompModelIo.py' 2023-06-11T18:40:53,455 adding 'mmcif_utils/chemcomp/PdbxChemCompUtils.py' 2023-06-11T18:40:53,458 adding 'mmcif_utils/chemcomp/__init__.py' 2023-06-11T18:40:53,462 adding 'mmcif_utils/inventory/InventoryIo.py' 2023-06-11T18:40:53,466 adding 'mmcif_utils/inventory/InventoryIoBatchRunner.py' 2023-06-11T18:40:53,468 adding 'mmcif_utils/inventory/__init__.py' 2023-06-11T18:40:53,473 adding 'mmcif_utils/message/PdbxMessage.py' 2023-06-11T18:40:53,476 adding 'mmcif_utils/message/PdbxMessageIo.py' 2023-06-11T18:40:53,478 adding 'mmcif_utils/message/__init__.py' 2023-06-11T18:40:53,484 adding 'mmcif_utils/pdb/PdbxAnnFeature.py' 2023-06-11T18:40:53,488 adding 'mmcif_utils/pdb/PdbxAtomSite.py' 2023-06-11T18:40:53,493 adding 'mmcif_utils/pdb/PdbxConnect.py' 2023-06-11T18:40:53,496 adding 'mmcif_utils/pdb/PdbxConnectTests.py' 2023-06-11T18:40:53,500 adding 'mmcif_utils/pdb/PdbxVersion.py' 2023-06-11T18:40:53,502 adding 'mmcif_utils/pdb/__init__.py' 2023-06-11T18:40:53,510 adding 'mmcif_utils/pdbx/PdbxIo.py' 2023-06-11T18:40:53,513 adding 'mmcif_utils/pdbx/__init__.py' 2023-06-11T18:40:53,517 adding 'mmcif_utils/persist/LockFile.py' 2023-06-11T18:40:53,520 adding 'mmcif_utils/persist/PdbxCoreIoAdapter.py' 2023-06-11T18:40:53,530 adding 'mmcif_utils/persist/PdbxDictionaryInfo.py' 2023-06-11T18:40:53,537 adding 'mmcif_utils/persist/PdbxPersist.py' 2023-06-11T18:40:53,541 adding 'mmcif_utils/persist/PdbxPyIoAdapter.py' 2023-06-11T18:40:53,544 adding 'mmcif_utils/persist/__init__.py' 2023-06-11T18:40:53,548 adding 'mmcif_utils/style/ChemCompCategoryStyle.py' 2023-06-11T18:40:53,552 adding 'mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py' 2023-06-11T18:40:53,555 adding 'mmcif_utils/style/ChemCompModelCategoryStyle.py' 2023-06-11T18:40:53,558 adding 'mmcif_utils/style/PdbxCategoryStyleBase.py' 2023-06-11T18:40:53,565 adding 'mmcif_utils/style/PdbxEmExtensionCategoryStyle.py' 2023-06-11T18:40:53,570 adding 'mmcif_utils/style/PdbxEntryInfoCategoryStyle.py' 2023-06-11T18:40:53,574 adding 'mmcif_utils/style/PdbxGeometryReportCategoryStyle.py' 2023-06-11T18:40:53,577 adding 'mmcif_utils/style/PdbxItemMappingCategoryStyle.py' 2023-06-11T18:40:53,579 adding 'mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py' 2023-06-11T18:40:53,582 adding 'mmcif_utils/style/PdbxMessageCategoryStyle.py' 2023-06-11T18:40:53,594 adding 'mmcif_utils/style/PdbxReportCategoryStyle.py' 2023-06-11T18:40:53,598 adding 'mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py' 2023-06-11T18:40:53,605 adding 'mmcif_utils/style/PdbxStyleIoUtil.py' 2023-06-11T18:40:53,609 adding 'mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py' 2023-06-11T18:40:53,613 adding 'mmcif_utils/style/PrdCategoryStyle.py' 2023-06-11T18:40:53,616 adding 'mmcif_utils/style/__init__.py' 2023-06-11T18:40:53,618 adding 'mmcif_utils/style/make-style-from-item-list.py' 2023-06-11T18:40:53,623 adding 'mmcif_utils/trans/DictionaryMapper.py' 2023-06-11T18:40:53,626 adding 'mmcif_utils/trans/DictionaryMapperIo.py' 2023-06-11T18:40:53,630 adding 'mmcif_utils/trans/FilterCif.py' 2023-06-11T18:40:53,636 adding 'mmcif_utils/trans/InstanceMapper.py' 2023-06-11T18:40:53,638 adding 'mmcif_utils/trans/__init__.py' 2023-06-11T18:40:53,640 adding 'mmcif.utils-0.26.dist-info/LICENSE' 2023-06-11T18:40:53,643 adding 'mmcif.utils-0.26.dist-info/METADATA' 2023-06-11T18:40:53,644 adding 'mmcif.utils-0.26.dist-info/WHEEL' 2023-06-11T18:40:53,646 adding 'mmcif.utils-0.26.dist-info/top_level.txt' 2023-06-11T18:40:53,648 adding 'mmcif.utils-0.26.dist-info/zip-safe' 2023-06-11T18:40:53,651 adding 'mmcif.utils-0.26.dist-info/RECORD' 2023-06-11T18:40:53,660 removing build/bdist.linux-armv7l/wheel 2023-06-11T18:40:53,855 Building wheel for mmcif-utils (setup.py): finished with status 'done' 2023-06-11T18:40:53,865 Created wheel for mmcif-utils: filename=mmcif.utils-0.26-py2.py3-none-any.whl size=121526 sha256=a11baa27411af32c357fc28ab18a540dd7310e6d31d2b8cfbc82dbdf6ea349ce 2023-06-11T18:40:53,867 Stored in directory: /tmp/pip-ephem-wheel-cache-2jsj39nr/wheels/fe/53/bc/1b0139cfc26fcaf138e989ad143e8bc96da5121715528723ac 2023-06-11T18:40:53,898 Successfully built mmcif-utils 2023-06-11T18:40:53,915 Removed build tracker: '/tmp/pip-build-tracker-nqtkvczz'