2023-06-13T17:12:49,220 Created temporary directory: /tmp/pip-build-tracker-d1ki957u 2023-06-13T17:12:49,221 Initialized build tracking at /tmp/pip-build-tracker-d1ki957u 2023-06-13T17:12:49,222 Created build tracker: /tmp/pip-build-tracker-d1ki957u 2023-06-13T17:12:49,222 Entered build tracker: /tmp/pip-build-tracker-d1ki957u 2023-06-13T17:12:49,223 Created temporary directory: /tmp/pip-wheel-f2025wag 2023-06-13T17:12:49,226 Created temporary directory: /tmp/pip-ephem-wheel-cache-6vw6ixni 2023-06-13T17:12:49,254 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-13T17:12:49,258 2 location(s) to search for versions of cpdb-protein: 2023-06-13T17:12:49,258 * https://pypi.org/simple/cpdb-protein/ 2023-06-13T17:12:49,258 * https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T17:12:49,258 Fetching project page and analyzing links: https://pypi.org/simple/cpdb-protein/ 2023-06-13T17:12:49,259 Getting page https://pypi.org/simple/cpdb-protein/ 2023-06-13T17:12:49,260 Found index url https://pypi.org/simple/ 2023-06-13T17:12:49,317 Fetched page https://pypi.org/simple/cpdb-protein/ as application/vnd.pypi.simple.v1+json 2023-06-13T17:12:49,318 Found link https://files.pythonhosted.org/packages/ed/58/a6f6d0924c7e4be968b8703eec99179403a13ce5e143660abef310a7717b/cpdb-protein-0.0.2.tar.gz (from https://pypi.org/simple/cpdb-protein/), version: 0.0.2 2023-06-13T17:12:49,318 Fetching project page and analyzing links: https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T17:12:49,318 Getting page https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T17:12:49,319 Found index url https://www.piwheels.org/simple/ 2023-06-13T17:12:49,486 Fetched page https://www.piwheels.org/simple/cpdb-protein/ as text/html 2023-06-13T17:12:49,487 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=1bb3a8682dcca32281b7e6f610373ebf0e762ad6e260460f0c7036cfb7263c8a (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T17:12:49,488 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=1bb3a8682dcca32281b7e6f610373ebf0e762ad6e260460f0c7036cfb7263c8a (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T17:12:49,488 Skipping link: not a file: https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T17:12:49,488 Skipping link: not a file: https://pypi.org/simple/cpdb-protein/ 2023-06-13T17:12:49,506 Given no hashes to check 1 links for project 'cpdb-protein': discarding no candidates 2023-06-13T17:12:49,522 Collecting cpdb-protein==0.0.2 2023-06-13T17:12:49,524 Created temporary directory: /tmp/pip-unpack-0ljwtv2s 2023-06-13T17:12:49,581 Downloading cpdb-protein-0.0.2.tar.gz (58 kB) 2023-06-13T17:12:49,652 Added cpdb-protein==0.0.2 from https://files.pythonhosted.org/packages/ed/58/a6f6d0924c7e4be968b8703eec99179403a13ce5e143660abef310a7717b/cpdb-protein-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-d1ki957u' 2023-06-13T17:12:49,654 Running setup.py (path:/tmp/pip-wheel-f2025wag/cpdb-protein_b4109983fc3c4e92a8b8c2a8122acf07/setup.py) egg_info for package cpdb-protein 2023-06-13T17:12:49,654 Created temporary directory: /tmp/pip-pip-egg-info-xiiwjfut 2023-06-13T17:12:49,655 Preparing metadata (setup.py): started 2023-06-13T17:12:49,656 Running command python setup.py egg_info 2023-06-13T17:12:51,528 running egg_info 2023-06-13T17:12:51,529 creating /tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info 2023-06-13T17:12:51,556 writing /tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/PKG-INFO 2023-06-13T17:12:51,558 writing dependency_links to /tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/dependency_links.txt 2023-06-13T17:12:51,560 writing requirements to /tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/requires.txt 2023-06-13T17:12:51,561 writing top-level names to /tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/top_level.txt 2023-06-13T17:12:51,562 writing manifest file '/tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T17:12:51,641 reading manifest file '/tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T17:12:51,643 reading manifest template 'MANIFEST.in' 2023-06-13T17:12:51,645 adding license file 'LICENSE' 2023-06-13T17:12:51,647 writing manifest file '/tmp/pip-pip-egg-info-xiiwjfut/cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T17:12:51,785 Preparing metadata (setup.py): finished with status 'done' 2023-06-13T17:12:51,790 Source in /tmp/pip-wheel-f2025wag/cpdb-protein_b4109983fc3c4e92a8b8c2a8122acf07 has version 0.0.2, which satisfies requirement cpdb-protein==0.0.2 from https://files.pythonhosted.org/packages/ed/58/a6f6d0924c7e4be968b8703eec99179403a13ce5e143660abef310a7717b/cpdb-protein-0.0.2.tar.gz 2023-06-13T17:12:51,791 Removed cpdb-protein==0.0.2 from https://files.pythonhosted.org/packages/ed/58/a6f6d0924c7e4be968b8703eec99179403a13ce5e143660abef310a7717b/cpdb-protein-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-d1ki957u' 2023-06-13T17:12:51,796 Created temporary directory: /tmp/pip-unpack-oi8bm3oc 2023-06-13T17:12:51,796 Building wheels for collected packages: cpdb-protein 2023-06-13T17:12:51,801 Created temporary directory: /tmp/pip-wheel-vcyuvyu3 2023-06-13T17:12:51,801 Building wheel for cpdb-protein (setup.py): started 2023-06-13T17:12:51,802 Destination directory: /tmp/pip-wheel-vcyuvyu3 2023-06-13T17:12:51,802 Running command python setup.py bdist_wheel 2023-06-13T17:12:53,360 running bdist_wheel 2023-06-13T17:12:53,464 running build 2023-06-13T17:12:53,464 running build_ext 2023-06-13T17:12:53,470 building 'parser' extension 2023-06-13T17:12:53,471 creating build 2023-06-13T17:12:53,471 creating build/temp.linux-armv7l-cpython-39 2023-06-13T17:12:53,472 creating build/temp.linux-armv7l-cpython-39/cpdb 2023-06-13T17:12:53,473 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c ./cpdb/parser.c -o build/temp.linux-armv7l-cpython-39/./cpdb/parser.o 2023-06-13T17:12:53,939 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-06-13T17:12:53,939 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-06-13T17:12:53,939 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-06-13T17:12:53,939 from ./cpdb/parser.c:763: 2023-06-13T17:12:53,939 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-06-13T17:12:53,940 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-06-13T17:12:53,940 | ^~~~~~~ 2023-06-13T17:13:00,277 creating build/lib.linux-armv7l-cpython-39 2023-06-13T17:13:00,277 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/./cpdb/parser.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/parser.cpython-39-arm-linux-gnueabihf.so 2023-06-13T17:13:00,459 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-13T17:13:00,459 !! 2023-06-13T17:13:00,460 ******************************************************************************** 2023-06-13T17:13:00,460 Please avoid running ``setup.py`` directly. 2023-06-13T17:13:00,460 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-13T17:13:00,460 other standards-based tools. 2023-06-13T17:13:00,460 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-13T17:13:00,460 ******************************************************************************** 2023-06-13T17:13:00,461 !! 2023-06-13T17:13:00,461 self.initialize_options() 2023-06-13T17:13:00,487 installing to build/bdist.linux-armv7l/wheel 2023-06-13T17:13:00,487 running install 2023-06-13T17:13:00,513 running install_lib 2023-06-13T17:13:00,541 creating build/bdist.linux-armv7l 2023-06-13T17:13:00,541 creating build/bdist.linux-armv7l/wheel 2023-06-13T17:13:00,543 copying build/lib.linux-armv7l-cpython-39/parser.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-06-13T17:13:00,550 running install_egg_info 2023-06-13T17:13:00,615 running egg_info 2023-06-13T17:13:00,640 writing cpdb_protein.egg-info/PKG-INFO 2023-06-13T17:13:00,642 writing dependency_links to cpdb_protein.egg-info/dependency_links.txt 2023-06-13T17:13:00,644 writing requirements to cpdb_protein.egg-info/requires.txt 2023-06-13T17:13:00,645 writing top-level names to cpdb_protein.egg-info/top_level.txt 2023-06-13T17:13:00,673 reading manifest file 'cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T17:13:00,675 reading manifest template 'MANIFEST.in' 2023-06-13T17:13:00,677 adding license file 'LICENSE' 2023-06-13T17:13:00,679 writing manifest file 'cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T17:13:00,680 Copying cpdb_protein.egg-info to build/bdist.linux-armv7l/wheel/cpdb_protein-0.0.2-py3.9.egg-info 2023-06-13T17:13:00,690 running install_scripts 2023-06-13T17:13:00,738 creating build/bdist.linux-armv7l/wheel/cpdb_protein-0.0.2.dist-info/WHEEL 2023-06-13T17:13:00,741 creating '/tmp/pip-wheel-vcyuvyu3/cpdb_protein-0.0.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-13T17:13:00,805 adding 'parser.cpython-39-arm-linux-gnueabihf.so' 2023-06-13T17:13:00,810 adding 'cpdb_protein-0.0.2.dist-info/LICENSE' 2023-06-13T17:13:00,811 adding 'cpdb_protein-0.0.2.dist-info/METADATA' 2023-06-13T17:13:00,812 adding 'cpdb_protein-0.0.2.dist-info/WHEEL' 2023-06-13T17:13:00,813 adding 'cpdb_protein-0.0.2.dist-info/top_level.txt' 2023-06-13T17:13:00,814 adding 'cpdb_protein-0.0.2.dist-info/RECORD' 2023-06-13T17:13:00,817 removing build/bdist.linux-armv7l/wheel 2023-06-13T17:13:00,973 Building wheel for cpdb-protein (setup.py): finished with status 'done' 2023-06-13T17:13:01,060 Created wheel for cpdb-protein: filename=cpdb_protein-0.0.2-cp39-cp39-linux_armv7l.whl size=123286 sha256=20b2a381b6c48b7d95899055fcaedad232305b5e3e72404912e427110ca2af51 2023-06-13T17:13:01,061 Stored in directory: /tmp/pip-ephem-wheel-cache-6vw6ixni/wheels/ee/9c/20/6475b08294595539b906dd06ec62c6c52f218737dc84cf68b0 2023-06-13T17:13:01,214 Successfully built cpdb-protein 2023-06-13T17:13:01,221 Removed build tracker: '/tmp/pip-build-tracker-d1ki957u'