2023-06-13T17:36:08,321 Created temporary directory: /tmp/pip-build-tracker-2qwdo75i
2023-06-13T17:36:08,324 Initialized build tracking at /tmp/pip-build-tracker-2qwdo75i
2023-06-13T17:36:08,325 Created build tracker: /tmp/pip-build-tracker-2qwdo75i
2023-06-13T17:36:08,325 Entered build tracker: /tmp/pip-build-tracker-2qwdo75i
2023-06-13T17:36:08,326 Created temporary directory: /tmp/pip-wheel-x4jn2rtt
2023-06-13T17:36:08,335 Created temporary directory: /tmp/pip-ephem-wheel-cache-mhihxmga
2023-06-13T17:36:08,432 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-13T17:36:08,440 2 location(s) to search for versions of galaxy-tool-util:
2023-06-13T17:36:08,440 * https://pypi.org/simple/galaxy-tool-util/
2023-06-13T17:36:08,440 * https://www.piwheels.org/simple/galaxy-tool-util/
2023-06-13T17:36:08,442 Fetching project page and analyzing links: https://pypi.org/simple/galaxy-tool-util/
2023-06-13T17:36:08,443 Getting page https://pypi.org/simple/galaxy-tool-util/
2023-06-13T17:36:08,447 Found index url https://pypi.org/simple/
2023-06-13T17:36:08,674 Fetched page https://pypi.org/simple/galaxy-tool-util/ as application/vnd.pypi.simple.v1+json
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2023-06-13T17:36:08,782   Found link https://files.pythonhosted.org/packages/ec/81/dd92bfa22aa0535da45af72bda47f1407deacb550907aa29a63439169e00/galaxy-tool-util-23.0.2.tar.gz (from https://pypi.org/simple/galaxy-tool-util/) (requires-python:>=3.7), version: 23.0.2
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2023-06-13T17:36:09,225   Skipping link: No binaries permitted for galaxy-tool-util: https://www.piwheels.org/simple/galaxy-tool-util/galaxy_tool_util-20.9.0.dev2-py2.py3-none-any.whl#sha256=998397ad8197715132eef7e82e4e4b94461fbee62a59a7ded386fb68f6b28b91 (from https://www.piwheels.org/simple/galaxy-tool-util/)
2023-06-13T17:36:09,226   Skipping link: No binaries permitted for galaxy-tool-util: https://www.piwheels.org/simple/galaxy-tool-util/galaxy_tool_util-20.9.0.dev1-py2.py3-none-any.whl#sha256=d37c148bb818e8ea85235cbffb29eaac409ea0bfaf925cd03236539cf43e98fe (from https://www.piwheels.org/simple/galaxy-tool-util/)
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2023-06-13T17:36:09,375 Given no hashes to check 1 links for project 'galaxy-tool-util': discarding no candidates
2023-06-13T17:36:09,407 Collecting galaxy-tool-util==23.0.2
2023-06-13T17:36:09,412   Created temporary directory: /tmp/pip-unpack-s7_6mqgx
2023-06-13T17:36:09,771   Downloading galaxy-tool-util-23.0.2.tar.gz (333 kB)
2023-06-13T17:36:11,354   Added galaxy-tool-util==23.0.2 from https://files.pythonhosted.org/packages/ec/81/dd92bfa22aa0535da45af72bda47f1407deacb550907aa29a63439169e00/galaxy-tool-util-23.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-2qwdo75i'
2023-06-13T17:36:11,360   Created temporary directory: /tmp/pip-build-env-qwqciauy
2023-06-13T17:36:11,380   Installing build dependencies: started
2023-06-13T17:36:11,382   Running command pip subprocess to install build dependencies
2023-06-13T17:36:15,473   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-06-13T17:36:17,439   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-13T17:36:22,757   Collecting setuptools
2023-06-13T17:36:23,186     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.8.0-py3-none-any.whl (1.1 MB)
2023-06-13T17:36:28,617   Installing collected packages: setuptools
2023-06-13T17:36:36,422   Successfully installed setuptools-67.8.0
2023-06-13T17:36:36,863   Installing build dependencies: finished with status 'done'
2023-06-13T17:36:36,878   Getting requirements to build wheel: started
2023-06-13T17:36:36,881   Running command Getting requirements to build wheel
2023-06-13T17:36:39,537   running egg_info
2023-06-13T17:36:39,546   writing galaxy_tool_util.egg-info/PKG-INFO
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2023-06-13T17:36:39,858   writing manifest file 'galaxy_tool_util.egg-info/SOURCES.txt'
2023-06-13T17:36:39,976   Getting requirements to build wheel: finished with status 'done'
2023-06-13T17:36:40,008   Installing backend dependencies: started
2023-06-13T17:36:40,011   Running command pip subprocess to install backend dependencies
2023-06-13T17:36:45,156   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-06-13T17:36:48,585   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-13T17:36:51,068   Collecting wheel
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2023-06-13T17:36:56,252   Installing collected packages: wheel
2023-06-13T17:36:57,213     Creating /tmp/pip-build-env-qwqciauy/normal/bin
2023-06-13T17:36:57,394     changing mode of /tmp/pip-build-env-qwqciauy/normal/bin/wheel to 755
2023-06-13T17:36:57,834   Successfully installed wheel-0.40.0
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2023-06-13T17:37:01,387   Created temporary directory: /tmp/pip-modern-metadata-3svgca1n
2023-06-13T17:37:01,394   Preparing metadata (pyproject.toml): started
2023-06-13T17:37:01,396   Running command Preparing metadata (pyproject.toml)
2023-06-13T17:37:04,140   running dist_info
2023-06-13T17:37:04,228   creating /tmp/pip-modern-metadata-3svgca1n/galaxy_tool_util.egg-info
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2023-06-13T17:37:04,734   creating '/tmp/pip-modern-metadata-3svgca1n/galaxy_tool_util-23.0.2.dist-info'
2023-06-13T17:37:05,100   Preparing metadata (pyproject.toml): finished with status 'done'
2023-06-13T17:37:05,156   Source in /tmp/pip-wheel-x4jn2rtt/galaxy-tool-util_03beacde602945a0a3388f9b39e3a7a9 has version 23.0.2, which satisfies requirement galaxy-tool-util==23.0.2 from https://files.pythonhosted.org/packages/ec/81/dd92bfa22aa0535da45af72bda47f1407deacb550907aa29a63439169e00/galaxy-tool-util-23.0.2.tar.gz
2023-06-13T17:37:05,158   Removed galaxy-tool-util==23.0.2 from https://files.pythonhosted.org/packages/ec/81/dd92bfa22aa0535da45af72bda47f1407deacb550907aa29a63439169e00/galaxy-tool-util-23.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-2qwdo75i'
2023-06-13T17:37:05,173 Created temporary directory: /tmp/pip-unpack-oya1kson
2023-06-13T17:37:05,174 Building wheels for collected packages: galaxy-tool-util
2023-06-13T17:37:05,183   Created temporary directory: /tmp/pip-wheel-3mcwp4l4
2023-06-13T17:37:05,184   Destination directory: /tmp/pip-wheel-3mcwp4l4
2023-06-13T17:37:05,189   Building wheel for galaxy-tool-util (pyproject.toml): started
2023-06-13T17:37:05,191   Running command Building wheel for galaxy-tool-util (pyproject.toml)
2023-06-13T17:37:07,397   running bdist_wheel
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2023-06-13T17:37:07,732   creating build/lib/galaxy/tool_util/linters
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2023-06-13T17:37:07,781   creating build/lib/galaxy/tool_util/data
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2023-06-13T17:37:07,822   creating build/lib/galaxy/tool_util/deps
2023-06-13T17:37:07,823   copying galaxy/tool_util/deps/docker_util.py -> build/lib/galaxy/tool_util/deps
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2023-06-13T17:37:07,928   copying galaxy/tool_util/deps/__init__.py -> build/lib/galaxy/tool_util/deps
2023-06-13T17:37:07,932   copying galaxy/tool_util/deps/container_classes.py -> build/lib/galaxy/tool_util/deps
2023-06-13T17:37:07,936   copying galaxy/tool_util/deps/dockerfiles.py -> build/lib/galaxy/tool_util/deps
2023-06-13T17:37:07,941   creating build/lib/galaxy/tool_util/verify
2023-06-13T17:37:07,943   copying galaxy/tool_util/verify/wait.py -> build/lib/galaxy/tool_util/verify
2023-06-13T17:37:07,947   copying galaxy/tool_util/verify/script.py -> build/lib/galaxy/tool_util/verify
2023-06-13T17:37:07,951   copying galaxy/tool_util/verify/interactor.py -> build/lib/galaxy/tool_util/verify
2023-06-13T17:37:07,960   copying galaxy/tool_util/verify/__init__.py -> build/lib/galaxy/tool_util/verify
2023-06-13T17:37:07,965   copying galaxy/tool_util/verify/test_data.py -> build/lib/galaxy/tool_util/verify
2023-06-13T17:37:07,969   creating build/lib/galaxy/tool_util/unittest_utils
2023-06-13T17:37:07,971   copying galaxy/tool_util/unittest_utils/sample_data.py -> build/lib/galaxy/tool_util/unittest_utils
2023-06-13T17:37:07,975   copying galaxy/tool_util/unittest_utils/interactor.py -> build/lib/galaxy/tool_util/unittest_utils
2023-06-13T17:37:07,978   copying galaxy/tool_util/unittest_utils/__init__.py -> build/lib/galaxy/tool_util/unittest_utils
2023-06-13T17:37:08,025   creating build/lib/galaxy/tool_util/biotools
2023-06-13T17:37:08,027   copying galaxy/tool_util/biotools/source.py -> build/lib/galaxy/tool_util/biotools
2023-06-13T17:37:08,031   copying galaxy/tool_util/biotools/__init__.py -> build/lib/galaxy/tool_util/biotools
2023-06-13T17:37:08,034   copying galaxy/tool_util/biotools/interface.py -> build/lib/galaxy/tool_util/biotools
2023-06-13T17:37:08,039   creating build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,041   copying galaxy/tool_util/cwl/parser.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,048   copying galaxy/tool_util/cwl/cwltool_deps.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,052   copying galaxy/tool_util/cwl/runtime_actions.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,056   copying galaxy/tool_util/cwl/representation.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,061   copying galaxy/tool_util/cwl/__init__.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,064   copying galaxy/tool_util/cwl/util.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,069   copying galaxy/tool_util/cwl/runnable.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,072   copying galaxy/tool_util/cwl/schema.py -> build/lib/galaxy/tool_util/cwl
2023-06-13T17:37:08,077   creating build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,164   copying galaxy/tool_util/toolbox/tags.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,168   copying galaxy/tool_util/toolbox/base.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,175   copying galaxy/tool_util/toolbox/parser.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,179   copying galaxy/tool_util/toolbox/integrated_panel.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,183   copying galaxy/tool_util/toolbox/panel.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,187   copying galaxy/tool_util/toolbox/__init__.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,190   copying galaxy/tool_util/toolbox/watcher.py -> build/lib/galaxy/tool_util/toolbox
2023-06-13T17:37:08,196   creating build/lib/galaxy/tool_util/locations
2023-06-13T17:37:08,197   copying galaxy/tool_util/locations/http.py -> build/lib/galaxy/tool_util/locations
2023-06-13T17:37:08,201   copying galaxy/tool_util/locations/dockstore.py -> build/lib/galaxy/tool_util/locations
2023-06-13T17:37:08,204   copying galaxy/tool_util/locations/file.py -> build/lib/galaxy/tool_util/locations
2023-06-13T17:37:08,207   copying galaxy/tool_util/locations/__init__.py -> build/lib/galaxy/tool_util/locations
2023-06-13T17:37:08,213   creating build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,214   copying galaxy/tool_util/deps/mulled/mulled_list.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,243   copying galaxy/tool_util/deps/mulled/get_tests.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,248   copying galaxy/tool_util/deps/mulled/mulled_build_channel.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,251   copying galaxy/tool_util/deps/mulled/mulled_hash.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,254   copying galaxy/tool_util/deps/mulled/mulled_search.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,259   copying galaxy/tool_util/deps/mulled/mulled_build.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,264   copying galaxy/tool_util/deps/mulled/__init__.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,267   copying galaxy/tool_util/deps/mulled/util.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,272   copying galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,276   copying galaxy/tool_util/deps/mulled/_cli.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,280   copying galaxy/tool_util/deps/mulled/mulled_build_tool.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,283   copying galaxy/tool_util/deps/mulled/mulled_build_files.py -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:08,288   creating build/lib/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:08,289   copying galaxy/tool_util/deps/container_resolvers/mulled.py -> build/lib/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:08,295   copying galaxy/tool_util/deps/container_resolvers/__init__.py -> build/lib/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:08,298   copying galaxy/tool_util/deps/container_resolvers/explicit.py -> build/lib/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:08,305   creating build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,306   copying galaxy/tool_util/deps/resolvers/galaxy_packages.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,310   copying galaxy/tool_util/deps/resolvers/lmod.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,314   copying galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,318   copying galaxy/tool_util/deps/resolvers/tool_shed_packages.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,322   copying galaxy/tool_util/deps/resolvers/resolver_mixins.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,325   copying galaxy/tool_util/deps/resolvers/modules.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,330   copying galaxy/tool_util/deps/resolvers/homebrew.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,333   copying galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,337   copying galaxy/tool_util/deps/resolvers/conda.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,342   copying galaxy/tool_util/deps/resolvers/__init__.py -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:08,349   creating build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,350   copying galaxy/tool_util/verify/asserts/tabular.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,354   copying galaxy/tool_util/verify/asserts/size.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,357   copying galaxy/tool_util/verify/asserts/archive.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,361   copying galaxy/tool_util/verify/asserts/xml.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,365   copying galaxy/tool_util/verify/asserts/text.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,369   copying galaxy/tool_util/verify/asserts/_util.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,372   copying galaxy/tool_util/verify/asserts/__init__.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,375   copying galaxy/tool_util/verify/asserts/hdf5.py -> build/lib/galaxy/tool_util/verify/asserts
2023-06-13T17:37:08,432   creating build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,434   copying galaxy/tool_util/toolbox/views/static.py -> build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,438   copying galaxy/tool_util/toolbox/views/sources.py -> build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,442   copying galaxy/tool_util/toolbox/views/edam.py -> build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,446   copying galaxy/tool_util/toolbox/views/__init__.py -> build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,448   copying galaxy/tool_util/toolbox/views/interface.py -> build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,452   copying galaxy/tool_util/toolbox/views/definitions.py -> build/lib/galaxy/tool_util/toolbox/views
2023-06-13T17:37:08,457   creating build/lib/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:08,458   copying galaxy/tool_util/toolbox/lineages/factory.py -> build/lib/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:08,462   copying galaxy/tool_util/toolbox/lineages/__init__.py -> build/lib/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:08,465   copying galaxy/tool_util/toolbox/lineages/interface.py -> build/lib/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:08,470   creating build/lib/galaxy/tool_util/toolbox/filters
2023-06-13T17:37:08,471   copying galaxy/tool_util/toolbox/filters/__init__.py -> build/lib/galaxy/tool_util/toolbox/filters
2023-06-13T17:37:08,475   running egg_info
2023-06-13T17:37:08,658   writing galaxy_tool_util.egg-info/PKG-INFO
2023-06-13T17:37:08,662   writing dependency_links to galaxy_tool_util.egg-info/dependency_links.txt
2023-06-13T17:37:08,666   writing entry points to galaxy_tool_util.egg-info/entry_points.txt
2023-06-13T17:37:08,669   writing requirements to galaxy_tool_util.egg-info/requires.txt
2023-06-13T17:37:08,671   writing top-level names to galaxy_tool_util.egg-info/top_level.txt
2023-06-13T17:37:08,793   reading manifest file 'galaxy_tool_util.egg-info/SOURCES.txt'
2023-06-13T17:37:08,805   reading manifest template 'MANIFEST.in'
2023-06-13T17:37:08,816   adding license file 'LICENSE'
2023-06-13T17:37:08,841   writing manifest file 'galaxy_tool_util.egg-info/SOURCES.txt'
2023-06-13T17:37:08,946   copying galaxy/py.typed -> build/lib/galaxy
2023-06-13T17:37:08,950   creating build/lib/galaxy/tool_util/xsd
2023-06-13T17:37:08,951   copying galaxy/tool_util/xsd/LICENSE -> build/lib/galaxy/tool_util/xsd
2023-06-13T17:37:08,955   copying galaxy/tool_util/xsd/README.md -> build/lib/galaxy/tool_util/xsd
2023-06-13T17:37:08,959   copying galaxy/tool_util/xsd/galaxy.jxb -> build/lib/galaxy/tool_util/xsd
2023-06-13T17:37:08,963   copying galaxy/tool_util/xsd/galaxy.xsd -> build/lib/galaxy/tool_util/xsd
2023-06-13T17:37:08,987   copying galaxy/tool_util/ontologies/biotools_mappings.tsv -> build/lib/galaxy/tool_util/ontologies
2023-06-13T17:37:09,030   copying galaxy/tool_util/ontologies/edam_operation_mappings.tsv -> build/lib/galaxy/tool_util/ontologies
2023-06-13T17:37:09,034   copying galaxy/tool_util/ontologies/edam_topic_mappings.tsv -> build/lib/galaxy/tool_util/ontologies
2023-06-13T17:37:09,038   copying galaxy/tool_util/verify/test_config.sample.yml -> build/lib/galaxy/tool_util/verify
2023-06-13T17:37:09,042   copying galaxy/tool_util/deps/mulled/invfile.lua -> build/lib/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,046   copying galaxy/tool_util/deps/resolvers/default_conda_mapping.yml -> build/lib/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,050   copying galaxy/tool_util/toolbox/filters/examples.py.sample -> build/lib/galaxy/tool_util/toolbox/filters
2023-06-13T17:37:09,156   installing to build/bdist.linux-armv7l/wheel
2023-06-13T17:37:09,157   running install
2023-06-13T17:37:09,219   running install_lib
2023-06-13T17:37:09,244   creating build/bdist.linux-armv7l
2023-06-13T17:37:09,245   creating build/bdist.linux-armv7l/wheel
2023-06-13T17:37:09,248   creating build/bdist.linux-armv7l/wheel/galaxy
2023-06-13T17:37:09,250   copying build/lib/galaxy/py.typed -> build/bdist.linux-armv7l/wheel/galaxy
2023-06-13T17:37:09,254   copying build/lib/galaxy/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy
2023-06-13T17:37:09,259   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:09,261   copying build/lib/galaxy/tool_util/provided_metadata.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:09,267   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies
2023-06-13T17:37:09,269   copying build/lib/galaxy/tool_util/ontologies/biotools_mappings.tsv -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies
2023-06-13T17:37:09,277   copying build/lib/galaxy/tool_util/ontologies/ontology_data.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies
2023-06-13T17:37:09,280   copying build/lib/galaxy/tool_util/ontologies/edam_topic_mappings.tsv -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies
2023-06-13T17:37:09,336   copying build/lib/galaxy/tool_util/ontologies/edam_operation_mappings.tsv -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies
2023-06-13T17:37:09,341   copying build/lib/galaxy/tool_util/ontologies/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies
2023-06-13T17:37:09,345   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,347   copying build/lib/galaxy/tool_util/parser/yaml.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,352   copying build/lib/galaxy/tool_util/parser/stdio.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,357   copying build/lib/galaxy/tool_util/parser/output_objects.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,362   copying build/lib/galaxy/tool_util/parser/output_actions.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,368   copying build/lib/galaxy/tool_util/parser/cwl.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,373   copying build/lib/galaxy/tool_util/parser/xml.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,380   copying build/lib/galaxy/tool_util/parser/factory.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,385   copying build/lib/galaxy/tool_util/parser/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,388   copying build/lib/galaxy/tool_util/parser/output_collection_def.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,440   copying build/lib/galaxy/tool_util/parser/util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,444   copying build/lib/galaxy/tool_util/parser/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser
2023-06-13T17:37:09,449   copying build/lib/galaxy/tool_util/loader.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:09,453   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/client
2023-06-13T17:37:09,455   copying build/lib/galaxy/tool_util/client/staging.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/client
2023-06-13T17:37:09,460   copying build/lib/galaxy/tool_util/client/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/client
2023-06-13T17:37:09,465   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,466   copying build/lib/galaxy/tool_util/linters/stdio.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,470   copying build/lib/galaxy/tool_util/linters/inputs.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,475   copying build/lib/galaxy/tool_util/linters/cwl.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,479   copying build/lib/galaxy/tool_util/linters/citations.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,482   copying build/lib/galaxy/tool_util/linters/xml_order.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,486   copying build/lib/galaxy/tool_util/linters/command.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,489   copying build/lib/galaxy/tool_util/linters/outputs.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,493   copying build/lib/galaxy/tool_util/linters/help.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,497   copying build/lib/galaxy/tool_util/linters/_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,500   copying build/lib/galaxy/tool_util/linters/general.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,503   copying build/lib/galaxy/tool_util/linters/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,507   copying build/lib/galaxy/tool_util/linters/tests.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters
2023-06-13T17:37:09,511   copying build/lib/galaxy/tool_util/fetcher.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:09,554   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd
2023-06-13T17:37:09,555   copying build/lib/galaxy/tool_util/xsd/LICENSE -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd
2023-06-13T17:37:09,559   copying build/lib/galaxy/tool_util/xsd/galaxy.xsd -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd
2023-06-13T17:37:09,578   copying build/lib/galaxy/tool_util/xsd/README.md -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd
2023-06-13T17:37:09,582   copying build/lib/galaxy/tool_util/xsd/galaxy.jxb -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd
2023-06-13T17:37:09,585   copying build/lib/galaxy/tool_util/lint.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:09,591   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/data
2023-06-13T17:37:09,592   copying build/lib/galaxy/tool_util/data/_schema.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/data
2023-06-13T17:37:09,596   copying build/lib/galaxy/tool_util/data/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/data
2023-06-13T17:37:09,604   copying build/lib/galaxy/tool_util/loader_directory.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:09,609   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,611   copying build/lib/galaxy/tool_util/deps/docker_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,616   copying build/lib/galaxy/tool_util/deps/brew_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,620   copying build/lib/galaxy/tool_util/deps/singularity_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,654   copying build/lib/galaxy/tool_util/deps/conda_compat.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,659   copying build/lib/galaxy/tool_util/deps/conda_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,665   copying build/lib/galaxy/tool_util/deps/containers.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,670   copying build/lib/galaxy/tool_util/deps/dependencies.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,675   copying build/lib/galaxy/tool_util/deps/container_volumes.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,679   copying build/lib/galaxy/tool_util/deps/commands.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,685   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,687   copying build/lib/galaxy/tool_util/deps/mulled/mulled_list.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,692   copying build/lib/galaxy/tool_util/deps/mulled/get_tests.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,698   copying build/lib/galaxy/tool_util/deps/mulled/mulled_build_channel.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,702   copying build/lib/galaxy/tool_util/deps/mulled/mulled_hash.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,706   copying build/lib/galaxy/tool_util/deps/mulled/invfile.lua -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,757   copying build/lib/galaxy/tool_util/deps/mulled/mulled_search.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,762   copying build/lib/galaxy/tool_util/deps/mulled/mulled_build.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,768   copying build/lib/galaxy/tool_util/deps/mulled/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,771   copying build/lib/galaxy/tool_util/deps/mulled/util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,776   copying build/lib/galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,781   copying build/lib/galaxy/tool_util/deps/mulled/_cli.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,784   copying build/lib/galaxy/tool_util/deps/mulled/mulled_build_tool.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,787   copying build/lib/galaxy/tool_util/deps/mulled/mulled_build_files.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled
2023-06-13T17:37:09,791   copying build/lib/galaxy/tool_util/deps/views.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,796   copying build/lib/galaxy/tool_util/deps/installable.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,799   copying build/lib/galaxy/tool_util/deps/brew_exts.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,803   copying build/lib/galaxy/tool_util/deps/requirements.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,808   copying build/lib/galaxy/tool_util/deps/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,862   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:09,865   copying build/lib/galaxy/tool_util/deps/container_resolvers/mulled.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:09,870   copying build/lib/galaxy/tool_util/deps/container_resolvers/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:09,874   copying build/lib/galaxy/tool_util/deps/container_resolvers/explicit.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers
2023-06-13T17:37:09,878   copying build/lib/galaxy/tool_util/deps/container_classes.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,883   copying build/lib/galaxy/tool_util/deps/dockerfiles.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps
2023-06-13T17:37:09,888   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,889   copying build/lib/galaxy/tool_util/deps/resolvers/galaxy_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,894   copying build/lib/galaxy/tool_util/deps/resolvers/lmod.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,898   copying build/lib/galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,902   copying build/lib/galaxy/tool_util/deps/resolvers/tool_shed_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,905   copying build/lib/galaxy/tool_util/deps/resolvers/default_conda_mapping.yml -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,909   copying build/lib/galaxy/tool_util/deps/resolvers/resolver_mixins.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,962   copying build/lib/galaxy/tool_util/deps/resolvers/modules.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,966   copying build/lib/galaxy/tool_util/deps/resolvers/homebrew.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,970   copying build/lib/galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,974   copying build/lib/galaxy/tool_util/deps/resolvers/conda.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,979   copying build/lib/galaxy/tool_util/deps/resolvers/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers
2023-06-13T17:37:09,984   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:09,986   copying build/lib/galaxy/tool_util/verify/test_config.sample.yml -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:09,990   copying build/lib/galaxy/tool_util/verify/wait.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:09,995   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:09,996   copying build/lib/galaxy/tool_util/verify/asserts/tabular.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,000   copying build/lib/galaxy/tool_util/verify/asserts/size.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,004   copying build/lib/galaxy/tool_util/verify/asserts/archive.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,007   copying build/lib/galaxy/tool_util/verify/asserts/xml.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,012   copying build/lib/galaxy/tool_util/verify/asserts/text.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,016   copying build/lib/galaxy/tool_util/verify/asserts/_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,019   copying build/lib/galaxy/tool_util/verify/asserts/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,023   copying build/lib/galaxy/tool_util/verify/asserts/hdf5.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts
2023-06-13T17:37:10,026   copying build/lib/galaxy/tool_util/verify/script.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:10,032   copying build/lib/galaxy/tool_util/verify/interactor.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:10,089   copying build/lib/galaxy/tool_util/verify/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:10,094   copying build/lib/galaxy/tool_util/verify/test_data.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify
2023-06-13T17:37:10,098   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils
2023-06-13T17:37:10,100   copying build/lib/galaxy/tool_util/unittest_utils/sample_data.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils
2023-06-13T17:37:10,104   copying build/lib/galaxy/tool_util/unittest_utils/interactor.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils
2023-06-13T17:37:10,107   copying build/lib/galaxy/tool_util/unittest_utils/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils
2023-06-13T17:37:10,111   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools
2023-06-13T17:37:10,113   copying build/lib/galaxy/tool_util/biotools/source.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools
2023-06-13T17:37:10,117   copying build/lib/galaxy/tool_util/biotools/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools
2023-06-13T17:37:10,120   copying build/lib/galaxy/tool_util/biotools/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools
2023-06-13T17:37:10,125   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,126   copying build/lib/galaxy/tool_util/cwl/parser.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,133   copying build/lib/galaxy/tool_util/cwl/cwltool_deps.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,137   copying build/lib/galaxy/tool_util/cwl/runtime_actions.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,141   copying build/lib/galaxy/tool_util/cwl/representation.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,147   copying build/lib/galaxy/tool_util/cwl/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,150   copying build/lib/galaxy/tool_util/cwl/util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,157   copying build/lib/galaxy/tool_util/cwl/runnable.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,161   copying build/lib/galaxy/tool_util/cwl/schema.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl
2023-06-13T17:37:10,219   copying build/lib/galaxy/tool_util/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:10,224   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,226   copying build/lib/galaxy/tool_util/toolbox/tags.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,230   copying build/lib/galaxy/tool_util/toolbox/base.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,238   copying build/lib/galaxy/tool_util/toolbox/parser.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,243   copying build/lib/galaxy/tool_util/toolbox/integrated_panel.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,247   copying build/lib/galaxy/tool_util/toolbox/panel.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,254   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,256   copying build/lib/galaxy/tool_util/toolbox/views/static.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,261   copying build/lib/galaxy/tool_util/toolbox/views/sources.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,265   copying build/lib/galaxy/tool_util/toolbox/views/edam.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,270   copying build/lib/galaxy/tool_util/toolbox/views/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,273   copying build/lib/galaxy/tool_util/toolbox/views/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,277   copying build/lib/galaxy/tool_util/toolbox/views/definitions.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views
2023-06-13T17:37:10,282   copying build/lib/galaxy/tool_util/toolbox/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,286   copying build/lib/galaxy/tool_util/toolbox/watcher.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox
2023-06-13T17:37:10,292   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:10,330   copying build/lib/galaxy/tool_util/toolbox/lineages/factory.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:10,335   copying build/lib/galaxy/tool_util/toolbox/lineages/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:10,339   copying build/lib/galaxy/tool_util/toolbox/lineages/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages
2023-06-13T17:37:10,344   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/filters
2023-06-13T17:37:10,346   copying build/lib/galaxy/tool_util/toolbox/filters/examples.py.sample -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/filters
2023-06-13T17:37:10,352   copying build/lib/galaxy/tool_util/toolbox/filters/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/filters
2023-06-13T17:37:10,357   creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations
2023-06-13T17:37:10,359   copying build/lib/galaxy/tool_util/locations/http.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations
2023-06-13T17:37:10,364   copying build/lib/galaxy/tool_util/locations/dockstore.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations
2023-06-13T17:37:10,368   copying build/lib/galaxy/tool_util/locations/file.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations
2023-06-13T17:37:10,372   copying build/lib/galaxy/tool_util/locations/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations
2023-06-13T17:37:10,376   copying build/lib/galaxy/tool_util/output_checker.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:10,453   copying build/lib/galaxy/tool_util/edam_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util
2023-06-13T17:37:10,457   running install_egg_info
2023-06-13T17:37:10,482   Copying galaxy_tool_util.egg-info to build/bdist.linux-armv7l/wheel/galaxy_tool_util-23.0.2-py3.7.egg-info
2023-06-13T17:37:10,537   running install_scripts
2023-06-13T17:37:10,583   creating build/bdist.linux-armv7l/wheel/galaxy_tool_util-23.0.2.dist-info/WHEEL
2023-06-13T17:37:10,588   creating '/tmp/pip-wheel-3mcwp4l4/.tmp-5bsfdze6/galaxy_tool_util-23.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-13T17:37:10,594   adding 'galaxy/__init__.py'
2023-06-13T17:37:10,597   adding 'galaxy/py.typed'
2023-06-13T17:37:10,602   adding 'galaxy/tool_util/__init__.py'
2023-06-13T17:37:10,605   adding 'galaxy/tool_util/edam_util.py'
2023-06-13T17:37:10,608   adding 'galaxy/tool_util/fetcher.py'
2023-06-13T17:37:10,614   adding 'galaxy/tool_util/lint.py'
2023-06-13T17:37:10,664   adding 'galaxy/tool_util/loader.py'
2023-06-13T17:37:10,669   adding 'galaxy/tool_util/loader_directory.py'
2023-06-13T17:37:10,674   adding 'galaxy/tool_util/output_checker.py'
2023-06-13T17:37:10,678   adding 'galaxy/tool_util/provided_metadata.py'
2023-06-13T17:37:10,683   adding 'galaxy/tool_util/biotools/__init__.py'
2023-06-13T17:37:10,686   adding 'galaxy/tool_util/biotools/interface.py'
2023-06-13T17:37:10,689   adding 'galaxy/tool_util/biotools/source.py'
2023-06-13T17:37:10,693   adding 'galaxy/tool_util/client/__init__.py'
2023-06-13T17:37:10,699   adding 'galaxy/tool_util/client/staging.py'
2023-06-13T17:37:10,704   adding 'galaxy/tool_util/cwl/__init__.py'
2023-06-13T17:37:10,707   adding 'galaxy/tool_util/cwl/cwltool_deps.py'
2023-06-13T17:37:10,722   adding 'galaxy/tool_util/cwl/parser.py'
2023-06-13T17:37:10,770   adding 'galaxy/tool_util/cwl/representation.py'
2023-06-13T17:37:10,774   adding 'galaxy/tool_util/cwl/runnable.py'
2023-06-13T17:37:10,778   adding 'galaxy/tool_util/cwl/runtime_actions.py'
2023-06-13T17:37:10,782   adding 'galaxy/tool_util/cwl/schema.py'
2023-06-13T17:37:10,790   adding 'galaxy/tool_util/cwl/util.py'
2023-06-13T17:37:10,809   adding 'galaxy/tool_util/data/__init__.py'
2023-06-13T17:37:10,814   adding 'galaxy/tool_util/data/_schema.py'
2023-06-13T17:37:10,822   adding 'galaxy/tool_util/deps/__init__.py'
2023-06-13T17:37:10,891   adding 'galaxy/tool_util/deps/brew_exts.py'
2023-06-13T17:37:10,895   adding 'galaxy/tool_util/deps/brew_util.py'
2023-06-13T17:37:10,898   adding 'galaxy/tool_util/deps/commands.py'
2023-06-13T17:37:10,901   adding 'galaxy/tool_util/deps/conda_compat.py'
2023-06-13T17:37:10,910   adding 'galaxy/tool_util/deps/conda_util.py'
2023-06-13T17:37:10,916   adding 'galaxy/tool_util/deps/container_classes.py'
2023-06-13T17:37:10,920   adding 'galaxy/tool_util/deps/container_volumes.py'
2023-06-13T17:37:10,926   adding 'galaxy/tool_util/deps/containers.py'
2023-06-13T17:37:10,930   adding 'galaxy/tool_util/deps/dependencies.py'
2023-06-13T17:37:10,934   adding 'galaxy/tool_util/deps/docker_util.py'
2023-06-13T17:37:10,938   adding 'galaxy/tool_util/deps/dockerfiles.py'
2023-06-13T17:37:10,974   adding 'galaxy/tool_util/deps/installable.py'
2023-06-13T17:37:10,979   adding 'galaxy/tool_util/deps/requirements.py'
2023-06-13T17:37:10,983   adding 'galaxy/tool_util/deps/singularity_util.py'
2023-06-13T17:37:10,988   adding 'galaxy/tool_util/deps/views.py'
2023-06-13T17:37:10,993   adding 'galaxy/tool_util/deps/container_resolvers/__init__.py'
2023-06-13T17:37:10,998   adding 'galaxy/tool_util/deps/container_resolvers/explicit.py'
2023-06-13T17:37:11,006   adding 'galaxy/tool_util/deps/container_resolvers/mulled.py'
2023-06-13T17:37:11,011   adding 'galaxy/tool_util/deps/mulled/__init__.py'
2023-06-13T17:37:11,014   adding 'galaxy/tool_util/deps/mulled/_cli.py'
2023-06-13T17:37:11,019   adding 'galaxy/tool_util/deps/mulled/get_tests.py'
2023-06-13T17:37:11,022   adding 'galaxy/tool_util/deps/mulled/invfile.lua'
2023-06-13T17:37:11,029   adding 'galaxy/tool_util/deps/mulled/mulled_build.py'
2023-06-13T17:37:11,033   adding 'galaxy/tool_util/deps/mulled/mulled_build_channel.py'
2023-06-13T17:37:11,036   adding 'galaxy/tool_util/deps/mulled/mulled_build_files.py'
2023-06-13T17:37:11,039   adding 'galaxy/tool_util/deps/mulled/mulled_build_tool.py'
2023-06-13T17:37:11,042   adding 'galaxy/tool_util/deps/mulled/mulled_hash.py'
2023-06-13T17:37:11,045   adding 'galaxy/tool_util/deps/mulled/mulled_list.py'
2023-06-13T17:37:11,050   adding 'galaxy/tool_util/deps/mulled/mulled_search.py'
2023-06-13T17:37:11,055   adding 'galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py'
2023-06-13T17:37:11,060   adding 'galaxy/tool_util/deps/mulled/util.py'
2023-06-13T17:37:11,066   adding 'galaxy/tool_util/deps/resolvers/__init__.py'
2023-06-13T17:37:11,069   adding 'galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py'
2023-06-13T17:37:11,075   adding 'galaxy/tool_util/deps/resolvers/conda.py'
2023-06-13T17:37:11,078   adding 'galaxy/tool_util/deps/resolvers/default_conda_mapping.yml'
2023-06-13T17:37:11,082   adding 'galaxy/tool_util/deps/resolvers/galaxy_packages.py'
2023-06-13T17:37:11,085   adding 'galaxy/tool_util/deps/resolvers/homebrew.py'
2023-06-13T17:37:11,088   adding 'galaxy/tool_util/deps/resolvers/lmod.py'
2023-06-13T17:37:11,092   adding 'galaxy/tool_util/deps/resolvers/modules.py'
2023-06-13T17:37:11,096   adding 'galaxy/tool_util/deps/resolvers/resolver_mixins.py'
2023-06-13T17:37:11,098   adding 'galaxy/tool_util/deps/resolvers/tool_shed_packages.py'
2023-06-13T17:37:11,102   adding 'galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py'
2023-06-13T17:37:11,106   adding 'galaxy/tool_util/linters/__init__.py'
2023-06-13T17:37:11,109   adding 'galaxy/tool_util/linters/_util.py'
2023-06-13T17:37:11,112   adding 'galaxy/tool_util/linters/citations.py'
2023-06-13T17:37:11,114   adding 'galaxy/tool_util/linters/command.py'
2023-06-13T17:37:11,117   adding 'galaxy/tool_util/linters/cwl.py'
2023-06-13T17:37:11,146   adding 'galaxy/tool_util/linters/general.py'
2023-06-13T17:37:11,149   adding 'galaxy/tool_util/linters/help.py'
2023-06-13T17:37:11,155   adding 'galaxy/tool_util/linters/inputs.py'
2023-06-13T17:37:11,159   adding 'galaxy/tool_util/linters/outputs.py'
2023-06-13T17:37:11,162   adding 'galaxy/tool_util/linters/stdio.py'
2023-06-13T17:37:11,166   adding 'galaxy/tool_util/linters/tests.py'
2023-06-13T17:37:11,169   adding 'galaxy/tool_util/linters/xml_order.py'
2023-06-13T17:37:11,172   adding 'galaxy/tool_util/locations/__init__.py'
2023-06-13T17:37:11,175   adding 'galaxy/tool_util/locations/dockstore.py'
2023-06-13T17:37:11,178   adding 'galaxy/tool_util/locations/file.py'
2023-06-13T17:37:11,180   adding 'galaxy/tool_util/locations/http.py'
2023-06-13T17:37:11,183   adding 'galaxy/tool_util/ontologies/__init__.py'
2023-06-13T17:37:11,197   adding 'galaxy/tool_util/ontologies/biotools_mappings.tsv'
2023-06-13T17:37:11,201   adding 'galaxy/tool_util/ontologies/edam_operation_mappings.tsv'
2023-06-13T17:37:11,254   adding 'galaxy/tool_util/ontologies/edam_topic_mappings.tsv'
2023-06-13T17:37:11,257   adding 'galaxy/tool_util/ontologies/ontology_data.py'
2023-06-13T17:37:11,261   adding 'galaxy/tool_util/parser/__init__.py'
2023-06-13T17:37:11,264   adding 'galaxy/tool_util/parser/cwl.py'
2023-06-13T17:37:11,267   adding 'galaxy/tool_util/parser/factory.py'
2023-06-13T17:37:11,273   adding 'galaxy/tool_util/parser/interface.py'
2023-06-13T17:37:11,279   adding 'galaxy/tool_util/parser/output_actions.py'
2023-06-13T17:37:11,283   adding 'galaxy/tool_util/parser/output_collection_def.py'
2023-06-13T17:37:11,288   adding 'galaxy/tool_util/parser/output_objects.py'
2023-06-13T17:37:11,292   adding 'galaxy/tool_util/parser/stdio.py'
2023-06-13T17:37:11,294   adding 'galaxy/tool_util/parser/util.py'
2023-06-13T17:37:11,308   adding 'galaxy/tool_util/parser/xml.py'
2023-06-13T17:37:11,355   adding 'galaxy/tool_util/parser/yaml.py'
2023-06-13T17:37:11,359   adding 'galaxy/tool_util/toolbox/__init__.py'
2023-06-13T17:37:11,379   adding 'galaxy/tool_util/toolbox/base.py'
2023-06-13T17:37:11,384   adding 'galaxy/tool_util/toolbox/integrated_panel.py'
2023-06-13T17:37:11,388   adding 'galaxy/tool_util/toolbox/panel.py'
2023-06-13T17:37:11,391   adding 'galaxy/tool_util/toolbox/parser.py'
2023-06-13T17:37:11,394   adding 'galaxy/tool_util/toolbox/tags.py'
2023-06-13T17:37:11,397   adding 'galaxy/tool_util/toolbox/watcher.py'
2023-06-13T17:37:11,402   adding 'galaxy/tool_util/toolbox/filters/__init__.py'
2023-06-13T17:37:11,405   adding 'galaxy/tool_util/toolbox/filters/examples.py.sample'
2023-06-13T17:37:11,408   adding 'galaxy/tool_util/toolbox/lineages/__init__.py'
2023-06-13T17:37:11,411   adding 'galaxy/tool_util/toolbox/lineages/factory.py'
2023-06-13T17:37:11,414   adding 'galaxy/tool_util/toolbox/lineages/interface.py'
2023-06-13T17:37:11,417   adding 'galaxy/tool_util/toolbox/views/__init__.py'
2023-06-13T17:37:11,420   adding 'galaxy/tool_util/toolbox/views/definitions.py'
2023-06-13T17:37:11,424   adding 'galaxy/tool_util/toolbox/views/edam.py'
2023-06-13T17:37:11,426   adding 'galaxy/tool_util/toolbox/views/interface.py'
2023-06-13T17:37:11,429   adding 'galaxy/tool_util/toolbox/views/sources.py'
2023-06-13T17:37:11,433   adding 'galaxy/tool_util/toolbox/views/static.py'
2023-06-13T17:37:11,437   adding 'galaxy/tool_util/unittest_utils/__init__.py'
2023-06-13T17:37:11,440   adding 'galaxy/tool_util/unittest_utils/interactor.py'
2023-06-13T17:37:11,443   adding 'galaxy/tool_util/unittest_utils/sample_data.py'
2023-06-13T17:37:11,449   adding 'galaxy/tool_util/verify/__init__.py'
2023-06-13T17:37:11,470   adding 'galaxy/tool_util/verify/interactor.py'
2023-06-13T17:37:11,479   adding 'galaxy/tool_util/verify/script.py'
2023-06-13T17:37:11,482   adding 'galaxy/tool_util/verify/test_config.sample.yml'
2023-06-13T17:37:11,485   adding 'galaxy/tool_util/verify/test_data.py'
2023-06-13T17:37:11,487   adding 'galaxy/tool_util/verify/wait.py'
2023-06-13T17:37:11,492   adding 'galaxy/tool_util/verify/asserts/__init__.py'
2023-06-13T17:37:11,495   adding 'galaxy/tool_util/verify/asserts/_util.py'
2023-06-13T17:37:11,498   adding 'galaxy/tool_util/verify/asserts/archive.py'
2023-06-13T17:37:11,500   adding 'galaxy/tool_util/verify/asserts/hdf5.py'
2023-06-13T17:37:11,597   adding 'galaxy/tool_util/verify/asserts/size.py'
2023-06-13T17:37:11,600   adding 'galaxy/tool_util/verify/asserts/tabular.py'
2023-06-13T17:37:11,603   adding 'galaxy/tool_util/verify/asserts/text.py'
2023-06-13T17:37:11,606   adding 'galaxy/tool_util/verify/asserts/xml.py'
2023-06-13T17:37:11,609   adding 'galaxy/tool_util/xsd/LICENSE'
2023-06-13T17:37:11,612   adding 'galaxy/tool_util/xsd/README.md'
2023-06-13T17:37:11,615   adding 'galaxy/tool_util/xsd/galaxy.jxb'
2023-06-13T17:37:11,712   adding 'galaxy/tool_util/xsd/galaxy.xsd'
2023-06-13T17:37:11,771   adding 'galaxy_tool_util-23.0.2.dist-info/LICENSE'
2023-06-13T17:37:11,774   adding 'galaxy_tool_util-23.0.2.dist-info/METADATA'
2023-06-13T17:37:11,776   adding 'galaxy_tool_util-23.0.2.dist-info/WHEEL'
2023-06-13T17:37:11,778   adding 'galaxy_tool_util-23.0.2.dist-info/entry_points.txt'
2023-06-13T17:37:11,780   adding 'galaxy_tool_util-23.0.2.dist-info/top_level.txt'
2023-06-13T17:37:11,786   adding 'galaxy_tool_util-23.0.2.dist-info/RECORD'
2023-06-13T17:37:11,808   removing build/bdist.linux-armv7l/wheel
2023-06-13T17:37:11,895   /tmp/pip-build-env-qwqciauy/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.tool_util.xsd' is absent from the `packages` configuration.
2023-06-13T17:37:11,896   !!

2023-06-13T17:37:11,897           ********************************************************************************
2023-06-13T17:37:11,897           ############################
2023-06-13T17:37:11,897           # Package would be ignored #
2023-06-13T17:37:11,898           ############################
2023-06-13T17:37:11,898           Python recognizes 'galaxy.tool_util.xsd' as an importable package[^1],
2023-06-13T17:37:11,898           but it is absent from setuptools' `packages` configuration.

2023-06-13T17:37:11,899           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-13T17:37:11,899           package, please make sure that 'galaxy.tool_util.xsd' is explicitly added
2023-06-13T17:37:11,899           to the `packages` configuration field.

2023-06-13T17:37:11,900           Alternatively, you can also rely on setuptools' discovery methods
2023-06-13T17:37:11,900           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-13T17:37:11,900           instead of `find_packages(...)`/`find:`).

2023-06-13T17:37:11,901           You can read more about "package discovery" on setuptools documentation page:

2023-06-13T17:37:11,902           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-13T17:37:11,903           If you don't want 'galaxy.tool_util.xsd' to be distributed and are
2023-06-13T17:37:11,903           already explicitly excluding 'galaxy.tool_util.xsd' via
2023-06-13T17:37:11,904           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-13T17:37:11,904           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-13T17:37:11,905           combination with a more fine grained `package-data` configuration.

2023-06-13T17:37:11,905           You can read more about "package data files" on setuptools documentation page:

2023-06-13T17:37:11,906           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-13T17:37:11,908           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-13T17:37:11,908                 even if it does not contain any `.py` files.
2023-06-13T17:37:11,909                 On the other hand, currently there is no concept of package data
2023-06-13T17:37:11,909                 directory, all directories are treated like packages.
2023-06-13T17:37:11,910           ********************************************************************************

2023-06-13T17:37:11,910   !!
2023-06-13T17:37:11,911     check.warn(importable)
2023-06-13T17:37:12,035   Building wheel for galaxy-tool-util (pyproject.toml): finished with status 'done'
2023-06-13T17:37:12,072   Created wheel for galaxy-tool-util: filename=galaxy_tool_util-23.0.2-py3-none-any.whl size=391592 sha256=ce2dab03064a3b13a28f913b3da8153f58e63211af0fda6a2973d57993807f43
2023-06-13T17:37:12,074   Stored in directory: /tmp/pip-ephem-wheel-cache-mhihxmga/wheels/c0/53/c3/336d69ac16c9f96a3568d61246a0c2fc9aa451903998fbc1a2
2023-06-13T17:37:12,256 Successfully built galaxy-tool-util
2023-06-13T17:37:12,294 Removed build tracker: '/tmp/pip-build-tracker-2qwdo75i'