2023-06-13T17:36:43,523 Created temporary directory: /tmp/pip-build-tracker-mpgv93rc 2023-06-13T17:36:43,526 Initialized build tracking at /tmp/pip-build-tracker-mpgv93rc 2023-06-13T17:36:43,527 Created build tracker: /tmp/pip-build-tracker-mpgv93rc 2023-06-13T17:36:43,527 Entered build tracker: /tmp/pip-build-tracker-mpgv93rc 2023-06-13T17:36:43,528 Created temporary directory: /tmp/pip-wheel-xot0vfxz 2023-06-13T17:36:43,537 Created temporary directory: /tmp/pip-ephem-wheel-cache-7_xrmy5_ 2023-06-13T17:36:43,619 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-13T17:36:43,627 2 location(s) to search for versions of galaxy-data: 2023-06-13T17:36:43,627 * https://pypi.org/simple/galaxy-data/ 2023-06-13T17:36:43,627 * https://www.piwheels.org/simple/galaxy-data/ 2023-06-13T17:36:43,629 Fetching project page and analyzing links: https://pypi.org/simple/galaxy-data/ 2023-06-13T17:36:43,630 Getting page https://pypi.org/simple/galaxy-data/ 2023-06-13T17:36:43,634 Found index url https://pypi.org/simple/ 2023-06-13T17:36:43,968 Fetched page https://pypi.org/simple/galaxy-data/ as application/vnd.pypi.simple.v1+json 2023-06-13T17:36:43,980 Found link https://files.pythonhosted.org/packages/1f/fa/d8f43cf473dabba250bd9d5fed96b1a5acc89517739bc26b91489f61fa57/galaxy-data-19.9.0.dev0.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 19.9.0.dev0 2023-06-13T17:36:43,980 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/42/ed/b96a4bff7db2009e0aaf27fa1b4e85c7dc2d247792888f0ba985a77da73c/galaxy_data-19.9.0.dev0-py2-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,981 Found link https://files.pythonhosted.org/packages/6e/e3/475e99a40432070b9490ccf497bcfb330899422c99301b23609eb73a04c2/galaxy-data-19.9.0.dev1.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 19.9.0.dev1 2023-06-13T17:36:43,982 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/40/9c/08f87528234ce742ff8f0df8ba1a5836dfeb4802efc91dc15a5046cb80e9/galaxy_data-19.9.0.dev1-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,982 Found link https://files.pythonhosted.org/packages/d7/42/c628115e4203827524f5b34f069f9bfb68b1ed478eb84f90c7eeb9eb5b2c/galaxy-data-19.9.0.dev2.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 19.9.0.dev2 2023-06-13T17:36:43,983 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/26/b7/9bb5d2672098376f1bb7b0cbea5fa55c7665e79696277057ea35ef934c0b/galaxy_data-19.9.0.dev2-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,984 Found link https://files.pythonhosted.org/packages/bf/66/f08a183222ff1bdb7a0367aad5ce8dbe810022bc357db3b9ffbabcdb2f1c/galaxy-data-19.9.0.dev3.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 19.9.0.dev3 2023-06-13T17:36:43,984 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/27/e4/844649b239845c00fde8467cb354aeb47cec9de628f6c05e9e0392722b0c/galaxy_data-19.9.0.dev3-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,985 Found link https://files.pythonhosted.org/packages/e8/3e/8acd9a701d24ddc783e34f6cc18e9be72cf541747a440632999e87c3f8d3/galaxy-data-20.5.0.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 20.5.0 2023-06-13T17:36:43,986 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/c0/5f/9fa5b30c59efdb5984639155be0ca5976ef23d17199d2c09ea63f2193450/galaxy_data-20.5.0-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,986 Found link https://files.pythonhosted.org/packages/0e/4e/43a7eaecae187c4a6fe983ed4199cbd399f2388f41e8477d5669ff43b727/galaxy-data-20.9.0.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 20.9.0 2023-06-13T17:36:43,987 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/04/2a/d65221ef740586bffa704237024479b7a7fcec5ee0c0f2ee9502dc083947/galaxy_data-20.9.0-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,988 Found link https://files.pythonhosted.org/packages/48/16/05f17f54f93b93498f4860abfce891b2fda325eede2541c18ba9e271c5a2/galaxy-data-20.9.1.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 20.9.1 2023-06-13T17:36:43,988 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/3f/a1/71fb190d7da03a532a45f56d196c22065c453cd1bc8aa5fa9879f4ddc6f6/galaxy_data-20.9.1-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,989 Found link https://files.pythonhosted.org/packages/93/f5/6696da2b2f223df9abcc16d3c4e0ffca2540ddcfb190cf2cd39013b89c92/galaxy-data-21.9.0.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 21.9.0 2023-06-13T17:36:43,990 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/66/8f/48d4c76155cfb93741848fd3de3ba1de5896a4ef959e25fe73ef6a4aafb9/galaxy_data-21.9.0-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,990 Found link https://files.pythonhosted.org/packages/67/0d/2ff944e5a9c78637800a640178995e11032cb64e6b132757cf6989379e33/galaxy-data-22.1.1.tar.gz (from https://pypi.org/simple/galaxy-data/), version: 22.1.1 2023-06-13T17:36:43,991 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/1d/f4/f015626c1e52bac0b29d06275ecba0008a4bc5964bbf1c0c5be9215b0959/galaxy_data-22.1.1-py2.py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) 2023-06-13T17:36:43,992 Found link https://files.pythonhosted.org/packages/63/da/655e1185fbe036e648199e7b4855970222a5b4be103afb96846d92a07f36/galaxy-data-23.0.1.tar.gz (from https://pypi.org/simple/galaxy-data/) (requires-python:>=3.7), version: 23.0.1 2023-06-13T17:36:43,993 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/fd/d9/8f25d0006c3db60a67ebdd7bbe0bfc0c11a898a36707bf7ef8938d33cde7/galaxy_data-23.0.1-py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) (requires-python:>=3.7) 2023-06-13T17:36:43,994 Found link https://files.pythonhosted.org/packages/3f/40/b647bdbe48ac7d52498a68168b8444495fea77e7c5e71ee5dc6bd88b18ee/galaxy-data-23.0.2.tar.gz (from https://pypi.org/simple/galaxy-data/) (requires-python:>=3.7), version: 23.0.2 2023-06-13T17:36:43,995 Skipping link: No binaries permitted for galaxy-data: https://files.pythonhosted.org/packages/d5/90/21a42e3dbc907e37b211ac59d2936a0f70983c9d647660de7e5c36a470f0/galaxy_data-23.0.2-py3-none-any.whl (from https://pypi.org/simple/galaxy-data/) (requires-python:>=3.7) 2023-06-13T17:36:43,996 Fetching project page and analyzing links: https://www.piwheels.org/simple/galaxy-data/ 2023-06-13T17:36:43,997 Getting page https://www.piwheels.org/simple/galaxy-data/ 2023-06-13T17:36:43,999 Found index url https://www.piwheels.org/simple/ 2023-06-13T17:36:44,342 Fetched page https://www.piwheels.org/simple/galaxy-data/ as text/html 2023-06-13T17:36:44,351 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-23.0.1-py3-none-any.whl#sha256=38f45c3df5f937ec7f557046dca6148d6b279b6706c66a18de89ab5c111c712c (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2023-06-13T17:36:44,352 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-22.1.1-py2.py3-none-any.whl#sha256=ecc837f08336d9e32b26184803927f5386aec84e8d67d2a30e198498bb951b19 (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,353 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-21.9.0-py2.py3-none-any.whl#sha256=7bd7fa30190a424a66c62f96012c6dd667990fc8ae39dcb1e4ddc6811e6c9a4d (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,353 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-20.9.1-py2.py3-none-any.whl#sha256=6a456ec927643665dae5c649a6a18460d79474bd5e1277274ea2174e952f94c2 (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,354 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-20.9.0-py2.py3-none-any.whl#sha256=ec937bfcfff347039541431d9724018b14a295ecc49f0831145f8947264a5d3b (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,354 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-20.5.0-py2.py3-none-any.whl#sha256=7ee3d488fc5ef68f91d03116383adac3f4db74334062abb069386b01b39d80f4 (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,355 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev3-py2.py3-none-any.whl#sha256=52651203dfccbfdf8b37326330598785a8c0002d69a461fba17f6a7031bdce85 (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,355 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev2-py2.py3-none-any.whl#sha256=be58e78b806fa3f85a8a8d45b7f040439a0c95d461003172d2b7b4430002d33f (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,356 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev1-py2.py3-none-any.whl#sha256=ef242b3d745ced066c572d137b43095eb7df42074a5e1e8eca76ea52cf065a92 (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,356 Skipping link: No binaries permitted for galaxy-data: https://www.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev0-py3-none-any.whl#sha256=d4831c48a07316758b909a471cb006e270083f3ceccc3d174f78b44b07a914ff (from https://www.piwheels.org/simple/galaxy-data/) 2023-06-13T17:36:44,357 Skipping link: not a file: https://www.piwheels.org/simple/galaxy-data/ 2023-06-13T17:36:44,358 Skipping link: not a file: https://pypi.org/simple/galaxy-data/ 2023-06-13T17:36:44,392 Given no hashes to check 1 links for project 'galaxy-data': discarding no candidates 2023-06-13T17:36:44,590 Collecting galaxy-data==23.0.2 2023-06-13T17:36:44,594 Created temporary directory: /tmp/pip-unpack-6twjzk71 2023-06-13T17:36:44,793 Downloading galaxy-data-23.0.2.tar.gz (529 kB) 2023-06-13T17:36:47,916 Added galaxy-data==23.0.2 from https://files.pythonhosted.org/packages/3f/40/b647bdbe48ac7d52498a68168b8444495fea77e7c5e71ee5dc6bd88b18ee/galaxy-data-23.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-mpgv93rc' 2023-06-13T17:36:47,922 Created temporary directory: /tmp/pip-build-env-vwtudatq 2023-06-13T17:36:47,997 Installing build dependencies: started 2023-06-13T17:36:47,999 Running command pip subprocess to install build dependencies 2023-06-13T17:36:52,880 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-06-13T17:36:54,438 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-13T17:36:59,662 Collecting setuptools 2023-06-13T17:37:00,695 Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.8.0-py3-none-any.whl (1.1 MB) 2023-06-13T17:37:06,461 Installing collected packages: setuptools 2023-06-13T17:37:13,192 Successfully installed setuptools-67.8.0 2023-06-13T17:37:13,635 Installing build dependencies: finished with status 'done' 2023-06-13T17:37:15,715 Getting requirements to build wheel: started 2023-06-13T17:37:15,717 Running command Getting requirements to build wheel 2023-06-13T17:37:18,781 running egg_info 2023-06-13T17:37:18,793 writing galaxy_data.egg-info/PKG-INFO 2023-06-13T17:37:18,798 writing dependency_links to galaxy_data.egg-info/dependency_links.txt 2023-06-13T17:37:18,804 writing entry points to galaxy_data.egg-info/entry_points.txt 2023-06-13T17:37:18,808 writing requirements to galaxy_data.egg-info/requires.txt 2023-06-13T17:37:18,811 writing top-level names to galaxy_data.egg-info/top_level.txt 2023-06-13T17:37:18,898 reading manifest file 'galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:18,940 reading manifest template 'MANIFEST.in' 2023-06-13T17:37:18,992 adding license file 'LICENSE' 2023-06-13T17:37:19,043 writing manifest file 'galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:19,161 Getting requirements to build wheel: finished with status 'done' 2023-06-13T17:37:19,186 Installing backend dependencies: started 2023-06-13T17:37:19,188 Running command pip subprocess to install backend dependencies 2023-06-13T17:37:21,878 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-06-13T17:37:22,632 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-13T17:37:23,497 Collecting wheel 2023-06-13T17:37:23,535 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-06-13T17:37:27,401 Installing collected packages: wheel 2023-06-13T17:37:27,933 Creating /tmp/pip-build-env-vwtudatq/normal/bin 2023-06-13T17:37:27,938 changing mode of /tmp/pip-build-env-vwtudatq/normal/bin/wheel to 755 2023-06-13T17:37:27,964 Successfully installed wheel-0.40.0 2023-06-13T17:37:28,343 Installing backend dependencies: finished with status 'done' 2023-06-13T17:37:28,349 Created temporary directory: /tmp/pip-modern-metadata-9g80obtj 2023-06-13T17:37:28,355 Preparing metadata (pyproject.toml): started 2023-06-13T17:37:28,358 Running command Preparing metadata (pyproject.toml) 2023-06-13T17:37:29,699 running dist_info 2023-06-13T17:37:29,739 creating /tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info 2023-06-13T17:37:29,748 writing /tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/PKG-INFO 2023-06-13T17:37:29,753 writing dependency_links to /tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/dependency_links.txt 2023-06-13T17:37:29,758 writing entry points to /tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/entry_points.txt 2023-06-13T17:37:29,761 writing requirements to /tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/requires.txt 2023-06-13T17:37:29,763 writing top-level names to /tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/top_level.txt 2023-06-13T17:37:29,766 writing manifest file '/tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:29,891 reading manifest file '/tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:29,896 reading manifest template 'MANIFEST.in' 2023-06-13T17:37:29,965 adding license file 'LICENSE' 2023-06-13T17:37:29,998 writing manifest file '/tmp/pip-modern-metadata-9g80obtj/galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:30,001 creating '/tmp/pip-modern-metadata-9g80obtj/galaxy_data-23.0.2.dist-info' 2023-06-13T17:37:30,327 Preparing metadata (pyproject.toml): finished with status 'done' 2023-06-13T17:37:30,344 Source in /tmp/pip-wheel-xot0vfxz/galaxy-data_af69e147a2204efcbbaa38a672e6fff1 has version 23.0.2, which satisfies requirement galaxy-data==23.0.2 from https://files.pythonhosted.org/packages/3f/40/b647bdbe48ac7d52498a68168b8444495fea77e7c5e71ee5dc6bd88b18ee/galaxy-data-23.0.2.tar.gz 2023-06-13T17:37:30,346 Removed galaxy-data==23.0.2 from https://files.pythonhosted.org/packages/3f/40/b647bdbe48ac7d52498a68168b8444495fea77e7c5e71ee5dc6bd88b18ee/galaxy-data-23.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-mpgv93rc' 2023-06-13T17:37:30,362 Created temporary directory: /tmp/pip-unpack-qz3pzhlq 2023-06-13T17:37:30,363 Building wheels for collected packages: galaxy-data 2023-06-13T17:37:30,372 Created temporary directory: /tmp/pip-wheel-1zr9054i 2023-06-13T17:37:30,373 Destination directory: /tmp/pip-wheel-1zr9054i 2023-06-13T17:37:30,378 Building wheel for galaxy-data (pyproject.toml): started 2023-06-13T17:37:30,380 Running command Building wheel for galaxy-data (pyproject.toml) 2023-06-13T17:37:31,902 running bdist_wheel 2023-06-13T17:37:31,979 running build 2023-06-13T17:37:31,979 running build_py 2023-06-13T17:37:31,996 creating build 2023-06-13T17:37:31,997 creating build/lib 2023-06-13T17:37:31,998 creating build/lib/galaxy 2023-06-13T17:37:32,000 copying galaxy/__init__.py -> build/lib/galaxy 2023-06-13T17:37:32,010 creating build/lib/galaxy/datatypes 2023-06-13T17:37:32,012 copying galaxy/datatypes/gis.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,017 copying galaxy/datatypes/flow.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,020 copying galaxy/datatypes/interval.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,029 copying galaxy/datatypes/text.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,036 copying galaxy/datatypes/annotation.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,039 copying galaxy/datatypes/qualityscore.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,042 copying galaxy/datatypes/graph.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,047 copying galaxy/datatypes/assembly.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,051 copying galaxy/datatypes/xml.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,055 copying galaxy/datatypes/registry.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,062 copying galaxy/datatypes/microarrays.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,066 copying galaxy/datatypes/media.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,070 copying galaxy/datatypes/neo4j.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,074 copying galaxy/datatypes/isa.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,078 copying galaxy/datatypes/__init__.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,081 copying galaxy/datatypes/phylip.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,085 copying galaxy/datatypes/plant_tribes.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,089 copying galaxy/datatypes/msa.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,093 copying galaxy/datatypes/_schema.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,097 copying galaxy/datatypes/sniff.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,103 copying galaxy/datatypes/constructive_solid_geometry.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,109 copying galaxy/datatypes/proteomics.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,114 copying galaxy/datatypes/goldenpath.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,119 copying galaxy/datatypes/ngsindex.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,122 copying galaxy/datatypes/triples.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,127 copying galaxy/datatypes/data.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,133 copying galaxy/datatypes/molecules.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,140 copying galaxy/datatypes/metadata.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,143 copying galaxy/datatypes/hdf5.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,147 copying galaxy/datatypes/mothur.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,154 copying galaxy/datatypes/checkers.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,157 copying galaxy/datatypes/qiime2.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,161 copying galaxy/datatypes/blast.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,166 copying galaxy/datatypes/speech.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,170 copying galaxy/datatypes/upload_util.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,174 copying galaxy/datatypes/coverage.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,179 copying galaxy/datatypes/tracks.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,184 copying galaxy/datatypes/anvio.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,190 copying galaxy/datatypes/images.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,194 copying galaxy/datatypes/spaln.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,198 copying galaxy/datatypes/genetics.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,204 copying galaxy/datatypes/sequence.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,212 copying galaxy/datatypes/tabular.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,222 copying galaxy/datatypes/binary.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,233 copying galaxy/datatypes/metacyto.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,237 copying galaxy/datatypes/chrominfo.py -> build/lib/galaxy/datatypes 2023-06-13T17:37:32,242 creating build/lib/galaxy/model 2023-06-13T17:37:32,244 copying galaxy/model/scoped_session.py -> build/lib/galaxy/model 2023-06-13T17:37:32,248 copying galaxy/model/database_utils.py -> build/lib/galaxy/model 2023-06-13T17:37:32,252 copying galaxy/model/tags.py -> build/lib/galaxy/model 2023-06-13T17:37:32,257 copying galaxy/model/search.py -> build/lib/galaxy/model 2023-06-13T17:37:32,262 copying galaxy/model/__init__.py -> build/lib/galaxy/model 2023-06-13T17:37:32,285 copying galaxy/model/item_attrs.py -> build/lib/galaxy/model 2023-06-13T17:37:32,289 copying galaxy/model/index_filter_util.py -> build/lib/galaxy/model 2023-06-13T17:37:32,293 copying galaxy/model/mapping.py -> build/lib/galaxy/model 2023-06-13T17:37:32,296 copying galaxy/model/deferred.py -> build/lib/galaxy/model 2023-06-13T17:37:32,300 copying galaxy/model/metadata.py -> build/lib/galaxy/model 2023-06-13T17:37:32,305 copying galaxy/model/none_like.py -> build/lib/galaxy/model 2023-06-13T17:37:32,309 copying galaxy/model/custom_types.py -> build/lib/galaxy/model 2023-06-13T17:37:32,313 copying galaxy/model/database_heartbeat.py -> build/lib/galaxy/model 2023-06-13T17:37:32,316 copying galaxy/model/base.py -> build/lib/galaxy/model 2023-06-13T17:37:32,320 copying galaxy/model/security.py -> build/lib/galaxy/model 2023-06-13T17:37:32,331 creating build/lib/galaxy/security 2023-06-13T17:37:32,332 copying galaxy/security/ssh_util.py -> build/lib/galaxy/security 2023-06-13T17:37:32,336 copying galaxy/security/vault.py -> build/lib/galaxy/security 2023-06-13T17:37:32,340 copying galaxy/security/__init__.py -> build/lib/galaxy/security 2023-06-13T17:37:32,345 copying galaxy/security/validate_user_input.py -> build/lib/galaxy/security 2023-06-13T17:37:32,349 copying galaxy/security/idencoding.py -> build/lib/galaxy/security 2023-06-13T17:37:32,353 copying galaxy/security/passwords.py -> build/lib/galaxy/security 2023-06-13T17:37:32,357 copying galaxy/security/object_wrapper.py -> build/lib/galaxy/security 2023-06-13T17:37:32,363 creating build/lib/galaxy/quota 2023-06-13T17:37:32,365 copying galaxy/quota/__init__.py -> build/lib/galaxy/quota 2023-06-13T17:37:32,370 copying galaxy/quota/_schema.py -> build/lib/galaxy/quota 2023-06-13T17:37:32,376 creating build/lib/galaxy/schema 2023-06-13T17:37:32,377 copying galaxy/schema/invocation.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,382 copying galaxy/schema/types.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,385 copying galaxy/schema/schema.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,394 copying galaxy/schema/__init__.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,397 copying galaxy/schema/fields.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,400 copying galaxy/schema/fetch_data.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,404 copying galaxy/schema/tasks.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,408 copying galaxy/schema/remote_files.py -> build/lib/galaxy/schema 2023-06-13T17:37:32,415 creating build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,417 copying galaxy/datatypes/converters/fastqsolexa_to_qual_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,421 copying galaxy/datatypes/converters/interval_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,424 copying galaxy/datatypes/converters/pileup_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,428 copying galaxy/datatypes/converters/interval_to_fli.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,431 copying galaxy/datatypes/converters/gff_to_bed_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,434 copying galaxy/datatypes/converters/interval_to_bed_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,438 copying galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,441 copying galaxy/datatypes/converters/pbed_ldreduced_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,445 copying galaxy/datatypes/converters/__init__.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,448 copying galaxy/datatypes/converters/bed_to_gff_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,451 copying galaxy/datatypes/converters/fastq_to_fqtoc.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,454 copying galaxy/datatypes/converters/fasta_to_tabular_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,457 copying galaxy/datatypes/converters/vcf_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,461 copying galaxy/datatypes/converters/maf_to_interval_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,464 copying galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,468 copying galaxy/datatypes/converters/wiggle_to_simple_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,471 copying galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,474 copying galaxy/datatypes/converters/parquet_to_csv_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,477 copying galaxy/datatypes/converters/fasta_to_len.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,481 copying galaxy/datatypes/converters/gff_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,484 copying galaxy/datatypes/converters/lped_to_pbed_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,487 copying galaxy/datatypes/converters/lped_to_fped_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,491 copying galaxy/datatypes/converters/maf_to_fasta_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,494 copying galaxy/datatypes/converters/pbed_to_lped_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,497 copying galaxy/datatypes/converters/tabular_csv.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,500 copying galaxy/datatypes/converters/interval_to_bedstrict_converter.py -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:32,507 creating build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,508 copying galaxy/datatypes/dataproviders/external.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,513 copying galaxy/datatypes/dataproviders/decorators.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,517 copying galaxy/datatypes/dataproviders/__init__.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,520 copying galaxy/datatypes/dataproviders/chunk.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,523 copying galaxy/datatypes/dataproviders/exceptions.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,527 copying galaxy/datatypes/dataproviders/hierarchy.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,531 copying galaxy/datatypes/dataproviders/dataset.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,537 copying galaxy/datatypes/dataproviders/column.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,543 copying galaxy/datatypes/dataproviders/line.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,548 copying galaxy/datatypes/dataproviders/base.py -> build/lib/galaxy/datatypes/dataproviders 2023-06-13T17:37:32,554 creating build/lib/galaxy/datatypes/display_applications 2023-06-13T17:37:32,556 copying galaxy/datatypes/display_applications/parameters.py -> build/lib/galaxy/datatypes/display_applications 2023-06-13T17:37:32,562 copying galaxy/datatypes/display_applications/application.py -> build/lib/galaxy/datatypes/display_applications 2023-06-13T17:37:32,567 copying galaxy/datatypes/display_applications/util.py -> build/lib/galaxy/datatypes/display_applications 2023-06-13T17:37:32,571 copying galaxy/datatypes/display_applications/__init__.py -> build/lib/galaxy/datatypes/display_applications 2023-06-13T17:37:32,576 creating build/lib/galaxy/datatypes/util 2023-06-13T17:37:32,579 copying galaxy/datatypes/util/gff_util.py -> build/lib/galaxy/datatypes/util 2023-06-13T17:37:32,648 copying galaxy/datatypes/util/__init__.py -> build/lib/galaxy/datatypes/util 2023-06-13T17:37:32,652 copying galaxy/datatypes/util/maf_utilities.py -> build/lib/galaxy/datatypes/util 2023-06-13T17:37:32,658 copying galaxy/datatypes/util/generic_util.py -> build/lib/galaxy/datatypes/util 2023-06-13T17:37:32,664 creating build/lib/galaxy/model/store 2023-06-13T17:37:32,666 copying galaxy/model/store/load_objects.py -> build/lib/galaxy/model/store 2023-06-13T17:37:32,670 copying galaxy/model/store/discover.py -> build/lib/galaxy/model/store 2023-06-13T17:37:32,676 copying galaxy/model/store/__init__.py -> build/lib/galaxy/model/store 2023-06-13T17:37:32,690 copying galaxy/model/store/_bco_convert_utils.py -> build/lib/galaxy/model/store 2023-06-13T17:37:32,694 copying galaxy/model/store/build_objects.py -> build/lib/galaxy/model/store 2023-06-13T17:37:32,698 copying galaxy/model/store/ro_crate_utils.py -> build/lib/galaxy/model/store 2023-06-13T17:37:32,705 creating build/lib/galaxy/model/view 2023-06-13T17:37:32,708 copying galaxy/model/view/__init__.py -> build/lib/galaxy/model/view 2023-06-13T17:37:32,712 copying galaxy/model/view/utils.py -> build/lib/galaxy/model/view 2023-06-13T17:37:32,718 creating build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,720 copying galaxy/model/unittest_utils/__init__.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,724 copying galaxy/model/unittest_utils/model_testing_utils.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,728 copying galaxy/model/unittest_utils/store_fixtures.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,733 copying galaxy/model/unittest_utils/gxy_model_fixtures.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,739 copying galaxy/model/unittest_utils/data_app.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,743 copying galaxy/model/unittest_utils/mapping_testing_utils.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,747 copying galaxy/model/unittest_utils/tsi_model_fixtures.py -> build/lib/galaxy/model/unittest_utils 2023-06-13T17:37:32,753 creating build/lib/galaxy/model/triggers 2023-06-13T17:37:32,755 copying galaxy/model/triggers/__init__.py -> build/lib/galaxy/model/triggers 2023-06-13T17:37:32,759 copying galaxy/model/triggers/history_update_time_field.py -> build/lib/galaxy/model/triggers 2023-06-13T17:37:32,763 copying galaxy/model/triggers/update_audit_table.py -> build/lib/galaxy/model/triggers 2023-06-13T17:37:32,767 copying galaxy/model/triggers/utils.py -> build/lib/galaxy/model/triggers 2023-06-13T17:37:32,772 creating build/lib/galaxy/model/migrations 2023-06-13T17:37:32,773 copying galaxy/model/migrations/dbscript.py -> build/lib/galaxy/model/migrations 2023-06-13T17:37:32,778 copying galaxy/model/migrations/util.py -> build/lib/galaxy/model/migrations 2023-06-13T17:37:32,781 copying galaxy/model/migrations/__init__.py -> build/lib/galaxy/model/migrations 2023-06-13T17:37:32,786 copying galaxy/model/migrations/scripts.py -> build/lib/galaxy/model/migrations 2023-06-13T17:37:32,792 creating build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,794 copying galaxy/model/dataset_collections/registry.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,798 copying galaxy/model/dataset_collections/matching.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,802 copying galaxy/model/dataset_collections/__init__.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,805 copying galaxy/model/dataset_collections/type_description.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,809 copying galaxy/model/dataset_collections/builder.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,813 copying galaxy/model/dataset_collections/subcollections.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,816 copying galaxy/model/dataset_collections/structure.py -> build/lib/galaxy/model/dataset_collections 2023-06-13T17:37:32,821 creating build/lib/galaxy/model/tool_shed_install 2023-06-13T17:37:32,823 copying galaxy/model/tool_shed_install/__init__.py -> build/lib/galaxy/model/tool_shed_install 2023-06-13T17:37:32,829 copying galaxy/model/tool_shed_install/mapping.py -> build/lib/galaxy/model/tool_shed_install 2023-06-13T17:37:32,834 creating build/lib/galaxy/model/orm 2023-06-13T17:37:32,836 copying galaxy/model/orm/util.py -> build/lib/galaxy/model/orm 2023-06-13T17:37:32,840 copying galaxy/model/orm/__init__.py -> build/lib/galaxy/model/orm 2023-06-13T17:37:32,844 copying galaxy/model/orm/scripts.py -> build/lib/galaxy/model/orm 2023-06-13T17:37:32,849 copying galaxy/model/orm/now.py -> build/lib/galaxy/model/orm 2023-06-13T17:37:32,853 copying galaxy/model/orm/engine_factory.py -> build/lib/galaxy/model/orm 2023-06-13T17:37:32,859 creating build/lib/galaxy/model/dataset_collections/types 2023-06-13T17:37:32,861 copying galaxy/model/dataset_collections/types/list.py -> build/lib/galaxy/model/dataset_collections/types 2023-06-13T17:37:32,865 copying galaxy/model/dataset_collections/types/__init__.py -> build/lib/galaxy/model/dataset_collections/types 2023-06-13T17:37:32,869 copying galaxy/model/dataset_collections/types/paired.py -> build/lib/galaxy/model/dataset_collections/types 2023-06-13T17:37:32,875 creating build/lib/galaxy/schema/drs 2023-06-13T17:37:32,877 copying galaxy/schema/drs/Checksum.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,881 copying galaxy/schema/drs/DrsService.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,885 copying galaxy/schema/drs/__init__.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,889 copying galaxy/schema/drs/AccessURL.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,893 copying galaxy/schema/drs/ContentsObject.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,897 copying galaxy/schema/drs/DrsObject.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,901 copying galaxy/schema/drs/Error.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,905 copying galaxy/schema/drs/AccessMethod.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,909 copying galaxy/schema/drs/Service.py -> build/lib/galaxy/schema/drs 2023-06-13T17:37:32,915 creating build/lib/galaxy/schema/bco 2023-06-13T17:37:32,916 copying galaxy/schema/bco/usability_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,920 copying galaxy/schema/bco/parametric_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,924 copying galaxy/schema/bco/util.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,927 copying galaxy/schema/bco/io_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,930 copying galaxy/schema/bco/__init__.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,934 copying galaxy/schema/bco/execution_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,938 copying galaxy/schema/bco/provenance_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,942 copying galaxy/schema/bco/description_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,947 copying galaxy/schema/bco/error_domain.py -> build/lib/galaxy/schema/bco 2023-06-13T17:37:32,952 running egg_info 2023-06-13T17:37:32,994 writing galaxy_data.egg-info/PKG-INFO 2023-06-13T17:37:32,999 writing dependency_links to galaxy_data.egg-info/dependency_links.txt 2023-06-13T17:37:33,003 writing entry points to galaxy_data.egg-info/entry_points.txt 2023-06-13T17:37:33,007 writing requirements to galaxy_data.egg-info/requires.txt 2023-06-13T17:37:33,010 writing top-level names to galaxy_data.egg-info/top_level.txt 2023-06-13T17:37:33,071 reading manifest file 'galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:33,094 reading manifest template 'MANIFEST.in' 2023-06-13T17:37:33,138 adding license file 'LICENSE' 2023-06-13T17:37:33,185 writing manifest file 'galaxy_data.egg-info/SOURCES.txt' 2023-06-13T17:37:33,204 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.biom' is absent from the `packages` configuration. 2023-06-13T17:37:33,204 !! 2023-06-13T17:37:33,205 ******************************************************************************** 2023-06-13T17:37:33,205 ############################ 2023-06-13T17:37:33,206 # Package would be ignored # 2023-06-13T17:37:33,206 ############################ 2023-06-13T17:37:33,206 Python recognizes 'galaxy.datatypes.display_applications.configs.biom' as an importable package[^1], 2023-06-13T17:37:33,207 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,207 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,208 package, please make sure that 'galaxy.datatypes.display_applications.configs.biom' is explicitly added 2023-06-13T17:37:33,208 to the `packages` configuration field. 2023-06-13T17:37:33,209 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,209 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,209 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,210 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,210 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,211 If you don't want 'galaxy.datatypes.display_applications.configs.biom' to be distributed and are 2023-06-13T17:37:33,211 already explicitly excluding 'galaxy.datatypes.display_applications.configs.biom' via 2023-06-13T17:37:33,212 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,212 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,212 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,213 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,214 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,215 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,215 even if it does not contain any `.py` files. 2023-06-13T17:37:33,215 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,216 directory, all directories are treated like packages. 2023-06-13T17:37:33,216 ******************************************************************************** 2023-06-13T17:37:33,217 !! 2023-06-13T17:37:33,217 check.warn(importable) 2023-06-13T17:37:33,217 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.ensembl' is absent from the `packages` configuration. 2023-06-13T17:37:33,217 !! 2023-06-13T17:37:33,218 ******************************************************************************** 2023-06-13T17:37:33,218 ############################ 2023-06-13T17:37:33,219 # Package would be ignored # 2023-06-13T17:37:33,219 ############################ 2023-06-13T17:37:33,219 Python recognizes 'galaxy.datatypes.display_applications.configs.ensembl' as an importable package[^1], 2023-06-13T17:37:33,220 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,220 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,221 package, please make sure that 'galaxy.datatypes.display_applications.configs.ensembl' is explicitly added 2023-06-13T17:37:33,221 to the `packages` configuration field. 2023-06-13T17:37:33,221 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,222 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,222 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,223 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,223 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,224 If you don't want 'galaxy.datatypes.display_applications.configs.ensembl' to be distributed and are 2023-06-13T17:37:33,224 already explicitly excluding 'galaxy.datatypes.display_applications.configs.ensembl' via 2023-06-13T17:37:33,224 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,225 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,225 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,226 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,226 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,227 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,227 even if it does not contain any `.py` files. 2023-06-13T17:37:33,228 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,228 directory, all directories are treated like packages. 2023-06-13T17:37:33,228 ******************************************************************************** 2023-06-13T17:37:33,229 !! 2023-06-13T17:37:33,229 check.warn(importable) 2023-06-13T17:37:33,229 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.gbrowse' is absent from the `packages` configuration. 2023-06-13T17:37:33,230 !! 2023-06-13T17:37:33,230 ******************************************************************************** 2023-06-13T17:37:33,231 ############################ 2023-06-13T17:37:33,231 # Package would be ignored # 2023-06-13T17:37:33,231 ############################ 2023-06-13T17:37:33,232 Python recognizes 'galaxy.datatypes.display_applications.configs.gbrowse' as an importable package[^1], 2023-06-13T17:37:33,232 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,232 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,233 package, please make sure that 'galaxy.datatypes.display_applications.configs.gbrowse' is explicitly added 2023-06-13T17:37:33,233 to the `packages` configuration field. 2023-06-13T17:37:33,234 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,234 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,234 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,235 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,235 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,236 If you don't want 'galaxy.datatypes.display_applications.configs.gbrowse' to be distributed and are 2023-06-13T17:37:33,236 already explicitly excluding 'galaxy.datatypes.display_applications.configs.gbrowse' via 2023-06-13T17:37:33,237 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,237 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,237 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,238 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,238 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,239 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,240 even if it does not contain any `.py` files. 2023-06-13T17:37:33,240 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,240 directory, all directories are treated like packages. 2023-06-13T17:37:33,240 ******************************************************************************** 2023-06-13T17:37:33,241 !! 2023-06-13T17:37:33,241 check.warn(importable) 2023-06-13T17:37:33,242 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.icn3d' is absent from the `packages` configuration. 2023-06-13T17:37:33,242 !! 2023-06-13T17:37:33,242 ******************************************************************************** 2023-06-13T17:37:33,243 ############################ 2023-06-13T17:37:33,243 # Package would be ignored # 2023-06-13T17:37:33,243 ############################ 2023-06-13T17:37:33,244 Python recognizes 'galaxy.datatypes.display_applications.configs.icn3d' as an importable package[^1], 2023-06-13T17:37:33,244 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,244 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,245 package, please make sure that 'galaxy.datatypes.display_applications.configs.icn3d' is explicitly added 2023-06-13T17:37:33,245 to the `packages` configuration field. 2023-06-13T17:37:33,246 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,246 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,246 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,247 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,248 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,248 If you don't want 'galaxy.datatypes.display_applications.configs.icn3d' to be distributed and are 2023-06-13T17:37:33,249 already explicitly excluding 'galaxy.datatypes.display_applications.configs.icn3d' via 2023-06-13T17:37:33,249 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,249 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,250 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,250 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,251 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,252 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,252 even if it does not contain any `.py` files. 2023-06-13T17:37:33,252 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,253 directory, all directories are treated like packages. 2023-06-13T17:37:33,253 ******************************************************************************** 2023-06-13T17:37:33,254 !! 2023-06-13T17:37:33,254 check.warn(importable) 2023-06-13T17:37:33,254 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.igb' is absent from the `packages` configuration. 2023-06-13T17:37:33,255 !! 2023-06-13T17:37:33,255 ******************************************************************************** 2023-06-13T17:37:33,255 ############################ 2023-06-13T17:37:33,256 # Package would be ignored # 2023-06-13T17:37:33,256 ############################ 2023-06-13T17:37:33,256 Python recognizes 'galaxy.datatypes.display_applications.configs.igb' as an importable package[^1], 2023-06-13T17:37:33,257 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,257 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,258 package, please make sure that 'galaxy.datatypes.display_applications.configs.igb' is explicitly added 2023-06-13T17:37:33,258 to the `packages` configuration field. 2023-06-13T17:37:33,259 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,259 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,259 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,260 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,260 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,261 If you don't want 'galaxy.datatypes.display_applications.configs.igb' to be distributed and are 2023-06-13T17:37:33,261 already explicitly excluding 'galaxy.datatypes.display_applications.configs.igb' via 2023-06-13T17:37:33,262 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,262 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,262 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,263 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,264 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,265 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,265 even if it does not contain any `.py` files. 2023-06-13T17:37:33,265 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,266 directory, all directories are treated like packages. 2023-06-13T17:37:33,266 ******************************************************************************** 2023-06-13T17:37:33,267 !! 2023-06-13T17:37:33,267 check.warn(importable) 2023-06-13T17:37:33,267 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.igv' is absent from the `packages` configuration. 2023-06-13T17:37:33,268 !! 2023-06-13T17:37:33,268 ******************************************************************************** 2023-06-13T17:37:33,269 ############################ 2023-06-13T17:37:33,269 # Package would be ignored # 2023-06-13T17:37:33,269 ############################ 2023-06-13T17:37:33,270 Python recognizes 'galaxy.datatypes.display_applications.configs.igv' as an importable package[^1], 2023-06-13T17:37:33,270 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,271 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,271 package, please make sure that 'galaxy.datatypes.display_applications.configs.igv' is explicitly added 2023-06-13T17:37:33,271 to the `packages` configuration field. 2023-06-13T17:37:33,272 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,272 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,273 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,273 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,274 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,275 If you don't want 'galaxy.datatypes.display_applications.configs.igv' to be distributed and are 2023-06-13T17:37:33,275 already explicitly excluding 'galaxy.datatypes.display_applications.configs.igv' via 2023-06-13T17:37:33,275 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,276 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,276 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,277 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,277 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,278 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,279 even if it does not contain any `.py` files. 2023-06-13T17:37:33,279 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,279 directory, all directories are treated like packages. 2023-06-13T17:37:33,280 ******************************************************************************** 2023-06-13T17:37:33,280 !! 2023-06-13T17:37:33,280 check.warn(importable) 2023-06-13T17:37:33,281 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.image' is absent from the `packages` configuration. 2023-06-13T17:37:33,281 !! 2023-06-13T17:37:33,282 ******************************************************************************** 2023-06-13T17:37:33,282 ############################ 2023-06-13T17:37:33,282 # Package would be ignored # 2023-06-13T17:37:33,283 ############################ 2023-06-13T17:37:33,283 Python recognizes 'galaxy.datatypes.display_applications.configs.image' as an importable package[^1], 2023-06-13T17:37:33,283 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,284 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,284 package, please make sure that 'galaxy.datatypes.display_applications.configs.image' is explicitly added 2023-06-13T17:37:33,285 to the `packages` configuration field. 2023-06-13T17:37:33,285 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,286 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,286 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,287 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,287 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,288 If you don't want 'galaxy.datatypes.display_applications.configs.image' to be distributed and are 2023-06-13T17:37:33,288 already explicitly excluding 'galaxy.datatypes.display_applications.configs.image' via 2023-06-13T17:37:33,289 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,289 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,289 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,290 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,290 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,291 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,292 even if it does not contain any `.py` files. 2023-06-13T17:37:33,292 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,292 directory, all directories are treated like packages. 2023-06-13T17:37:33,293 ******************************************************************************** 2023-06-13T17:37:33,293 !! 2023-06-13T17:37:33,294 check.warn(importable) 2023-06-13T17:37:33,294 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.intermine' is absent from the `packages` configuration. 2023-06-13T17:37:33,294 !! 2023-06-13T17:37:33,295 ******************************************************************************** 2023-06-13T17:37:33,295 ############################ 2023-06-13T17:37:33,296 # Package would be ignored # 2023-06-13T17:37:33,296 ############################ 2023-06-13T17:37:33,296 Python recognizes 'galaxy.datatypes.display_applications.configs.intermine' as an importable package[^1], 2023-06-13T17:37:33,297 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,297 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,298 package, please make sure that 'galaxy.datatypes.display_applications.configs.intermine' is explicitly added 2023-06-13T17:37:33,298 to the `packages` configuration field. 2023-06-13T17:37:33,299 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,299 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,299 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,300 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,301 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,301 If you don't want 'galaxy.datatypes.display_applications.configs.intermine' to be distributed and are 2023-06-13T17:37:33,302 already explicitly excluding 'galaxy.datatypes.display_applications.configs.intermine' via 2023-06-13T17:37:33,302 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,302 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,302 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,303 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,304 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,305 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,305 even if it does not contain any `.py` files. 2023-06-13T17:37:33,305 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,306 directory, all directories are treated like packages. 2023-06-13T17:37:33,306 ******************************************************************************** 2023-06-13T17:37:33,307 !! 2023-06-13T17:37:33,307 check.warn(importable) 2023-06-13T17:37:33,307 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.iobio' is absent from the `packages` configuration. 2023-06-13T17:37:33,308 !! 2023-06-13T17:37:33,308 ******************************************************************************** 2023-06-13T17:37:33,309 ############################ 2023-06-13T17:37:33,309 # Package would be ignored # 2023-06-13T17:37:33,309 ############################ 2023-06-13T17:37:33,310 Python recognizes 'galaxy.datatypes.display_applications.configs.iobio' as an importable package[^1], 2023-06-13T17:37:33,310 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,311 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,311 package, please make sure that 'galaxy.datatypes.display_applications.configs.iobio' is explicitly added 2023-06-13T17:37:33,311 to the `packages` configuration field. 2023-06-13T17:37:33,312 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,312 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,312 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,313 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,314 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,315 If you don't want 'galaxy.datatypes.display_applications.configs.iobio' to be distributed and are 2023-06-13T17:37:33,315 already explicitly excluding 'galaxy.datatypes.display_applications.configs.iobio' via 2023-06-13T17:37:33,315 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,316 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,316 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,317 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,317 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,318 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,319 even if it does not contain any `.py` files. 2023-06-13T17:37:33,319 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,319 directory, all directories are treated like packages. 2023-06-13T17:37:33,320 ******************************************************************************** 2023-06-13T17:37:33,320 !! 2023-06-13T17:37:33,321 check.warn(importable) 2023-06-13T17:37:33,321 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.minerva' is absent from the `packages` configuration. 2023-06-13T17:37:33,321 !! 2023-06-13T17:37:33,322 ******************************************************************************** 2023-06-13T17:37:33,322 ############################ 2023-06-13T17:37:33,323 # Package would be ignored # 2023-06-13T17:37:33,323 ############################ 2023-06-13T17:37:33,323 Python recognizes 'galaxy.datatypes.display_applications.configs.minerva' as an importable package[^1], 2023-06-13T17:37:33,324 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,325 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,325 package, please make sure that 'galaxy.datatypes.display_applications.configs.minerva' is explicitly added 2023-06-13T17:37:33,326 to the `packages` configuration field. 2023-06-13T17:37:33,326 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,327 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,327 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,328 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,328 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,329 If you don't want 'galaxy.datatypes.display_applications.configs.minerva' to be distributed and are 2023-06-13T17:37:33,329 already explicitly excluding 'galaxy.datatypes.display_applications.configs.minerva' via 2023-06-13T17:37:33,330 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,330 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,330 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,331 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,331 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,332 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,333 even if it does not contain any `.py` files. 2023-06-13T17:37:33,333 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,333 directory, all directories are treated like packages. 2023-06-13T17:37:33,334 ******************************************************************************** 2023-06-13T17:37:33,334 !! 2023-06-13T17:37:33,335 check.warn(importable) 2023-06-13T17:37:33,335 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.qiime.qiime2' is absent from the `packages` configuration. 2023-06-13T17:37:33,335 !! 2023-06-13T17:37:33,336 ******************************************************************************** 2023-06-13T17:37:33,336 ############################ 2023-06-13T17:37:33,337 # Package would be ignored # 2023-06-13T17:37:33,337 ############################ 2023-06-13T17:37:33,337 Python recognizes 'galaxy.datatypes.display_applications.configs.qiime.qiime2' as an importable package[^1], 2023-06-13T17:37:33,338 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,338 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,339 package, please make sure that 'galaxy.datatypes.display_applications.configs.qiime.qiime2' is explicitly added 2023-06-13T17:37:33,339 to the `packages` configuration field. 2023-06-13T17:37:33,340 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,340 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,340 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,341 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,341 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,342 If you don't want 'galaxy.datatypes.display_applications.configs.qiime.qiime2' to be distributed and are 2023-06-13T17:37:33,342 already explicitly excluding 'galaxy.datatypes.display_applications.configs.qiime.qiime2' via 2023-06-13T17:37:33,343 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,343 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,344 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,344 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,345 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,346 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,347 even if it does not contain any `.py` files. 2023-06-13T17:37:33,347 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,347 directory, all directories are treated like packages. 2023-06-13T17:37:33,348 ******************************************************************************** 2023-06-13T17:37:33,348 !! 2023-06-13T17:37:33,349 check.warn(importable) 2023-06-13T17:37:33,349 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.rviewer' is absent from the `packages` configuration. 2023-06-13T17:37:33,349 !! 2023-06-13T17:37:33,350 ******************************************************************************** 2023-06-13T17:37:33,350 ############################ 2023-06-13T17:37:33,351 # Package would be ignored # 2023-06-13T17:37:33,351 ############################ 2023-06-13T17:37:33,351 Python recognizes 'galaxy.datatypes.display_applications.configs.rviewer' as an importable package[^1], 2023-06-13T17:37:33,352 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,352 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,353 package, please make sure that 'galaxy.datatypes.display_applications.configs.rviewer' is explicitly added 2023-06-13T17:37:33,353 to the `packages` configuration field. 2023-06-13T17:37:33,354 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,354 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,354 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,355 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,356 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,356 If you don't want 'galaxy.datatypes.display_applications.configs.rviewer' to be distributed and are 2023-06-13T17:37:33,357 already explicitly excluding 'galaxy.datatypes.display_applications.configs.rviewer' via 2023-06-13T17:37:33,357 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,357 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,358 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,358 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,359 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,360 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,360 even if it does not contain any `.py` files. 2023-06-13T17:37:33,360 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,361 directory, all directories are treated like packages. 2023-06-13T17:37:33,361 ******************************************************************************** 2023-06-13T17:37:33,362 !! 2023-06-13T17:37:33,362 check.warn(importable) 2023-06-13T17:37:33,362 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.configs.ucsc' is absent from the `packages` configuration. 2023-06-13T17:37:33,363 !! 2023-06-13T17:37:33,363 ******************************************************************************** 2023-06-13T17:37:33,364 ############################ 2023-06-13T17:37:33,364 # Package would be ignored # 2023-06-13T17:37:33,364 ############################ 2023-06-13T17:37:33,365 Python recognizes 'galaxy.datatypes.display_applications.configs.ucsc' as an importable package[^1], 2023-06-13T17:37:33,365 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,366 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,366 package, please make sure that 'galaxy.datatypes.display_applications.configs.ucsc' is explicitly added 2023-06-13T17:37:33,366 to the `packages` configuration field. 2023-06-13T17:37:33,367 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,367 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,368 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,368 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,369 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,370 If you don't want 'galaxy.datatypes.display_applications.configs.ucsc' to be distributed and are 2023-06-13T17:37:33,370 already explicitly excluding 'galaxy.datatypes.display_applications.configs.ucsc' via 2023-06-13T17:37:33,370 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,371 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,371 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,372 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,372 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,373 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,373 even if it does not contain any `.py` files. 2023-06-13T17:37:33,374 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,374 directory, all directories are treated like packages. 2023-06-13T17:37:33,374 ******************************************************************************** 2023-06-13T17:37:33,375 !! 2023-06-13T17:37:33,375 check.warn(importable) 2023-06-13T17:37:33,376 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.datatypes.display_applications.xsd' is absent from the `packages` configuration. 2023-06-13T17:37:33,376 !! 2023-06-13T17:37:33,377 ******************************************************************************** 2023-06-13T17:37:33,377 ############################ 2023-06-13T17:37:33,378 # Package would be ignored # 2023-06-13T17:37:33,378 ############################ 2023-06-13T17:37:33,379 Python recognizes 'galaxy.datatypes.display_applications.xsd' as an importable package[^1], 2023-06-13T17:37:33,379 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,380 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,380 package, please make sure that 'galaxy.datatypes.display_applications.xsd' is explicitly added 2023-06-13T17:37:33,380 to the `packages` configuration field. 2023-06-13T17:37:33,381 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,382 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,382 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,383 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,384 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,385 If you don't want 'galaxy.datatypes.display_applications.xsd' to be distributed and are 2023-06-13T17:37:33,385 already explicitly excluding 'galaxy.datatypes.display_applications.xsd' via 2023-06-13T17:37:33,386 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,387 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,387 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,388 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,389 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,390 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,390 even if it does not contain any `.py` files. 2023-06-13T17:37:33,390 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,391 directory, all directories are treated like packages. 2023-06-13T17:37:33,391 ******************************************************************************** 2023-06-13T17:37:33,392 !! 2023-06-13T17:37:33,392 check.warn(importable) 2023-06-13T17:37:33,392 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.model.migrations.alembic' is absent from the `packages` configuration. 2023-06-13T17:37:33,393 !! 2023-06-13T17:37:33,393 ******************************************************************************** 2023-06-13T17:37:33,393 ############################ 2023-06-13T17:37:33,394 # Package would be ignored # 2023-06-13T17:37:33,394 ############################ 2023-06-13T17:37:33,395 Python recognizes 'galaxy.model.migrations.alembic' as an importable package[^1], 2023-06-13T17:37:33,395 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,395 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,396 package, please make sure that 'galaxy.model.migrations.alembic' is explicitly added 2023-06-13T17:37:33,396 to the `packages` configuration field. 2023-06-13T17:37:33,397 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,397 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,397 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,398 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,399 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,399 If you don't want 'galaxy.model.migrations.alembic' to be distributed and are 2023-06-13T17:37:33,400 already explicitly excluding 'galaxy.model.migrations.alembic' via 2023-06-13T17:37:33,400 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,400 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,401 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,401 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,402 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,403 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,403 even if it does not contain any `.py` files. 2023-06-13T17:37:33,404 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,404 directory, all directories are treated like packages. 2023-06-13T17:37:33,404 ******************************************************************************** 2023-06-13T17:37:33,405 !! 2023-06-13T17:37:33,405 check.warn(importable) 2023-06-13T17:37:33,406 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.model.migrations.alembic.versions_gxy' is absent from the `packages` configuration. 2023-06-13T17:37:33,406 !! 2023-06-13T17:37:33,407 ******************************************************************************** 2023-06-13T17:37:33,407 ############################ 2023-06-13T17:37:33,408 # Package would be ignored # 2023-06-13T17:37:33,408 ############################ 2023-06-13T17:37:33,408 Python recognizes 'galaxy.model.migrations.alembic.versions_gxy' as an importable package[^1], 2023-06-13T17:37:33,409 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:33,409 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:33,410 package, please make sure that 'galaxy.model.migrations.alembic.versions_gxy' is explicitly added 2023-06-13T17:37:33,410 to the `packages` configuration field. 2023-06-13T17:37:33,411 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:33,411 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:33,411 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:33,412 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:33,413 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:33,413 If you don't want 'galaxy.model.migrations.alembic.versions_gxy' to be distributed and are 2023-06-13T17:37:33,414 already explicitly excluding 'galaxy.model.migrations.alembic.versions_gxy' via 2023-06-13T17:37:33,414 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:33,414 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:33,415 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:33,416 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:33,416 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:33,417 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:33,417 even if it does not contain any `.py` files. 2023-06-13T17:37:33,418 On the other hand, currently there is no concept of package data 2023-06-13T17:37:33,418 directory, all directories are treated like packages. 2023-06-13T17:37:33,419 ******************************************************************************** 2023-06-13T17:37:33,419 !! 2023-06-13T17:37:33,420 check.warn(importable) 2023-06-13T17:37:33,420 copying galaxy/py.typed -> build/lib/galaxy 2023-06-13T17:37:33,421 copying galaxy/datatypes/set_metadata_tool.xml -> build/lib/galaxy/datatypes 2023-06-13T17:37:33,421 copying galaxy/datatypes/converters/bam_to_bai.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,422 copying galaxy/datatypes/converters/bam_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,422 copying galaxy/datatypes/converters/bcf_bcf_uncompressed_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,422 copying galaxy/datatypes/converters/bed_gff_or_vcf_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,423 copying galaxy/datatypes/converters/bed_to_fli_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,423 copying galaxy/datatypes/converters/bed_to_gff_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,423 copying galaxy/datatypes/converters/bed_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,424 copying galaxy/datatypes/converters/bedgraph_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,424 copying galaxy/datatypes/converters/bigwig_to_wig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,425 copying galaxy/datatypes/converters/biom.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,425 copying galaxy/datatypes/converters/bz2_to_uncompressed.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,426 copying galaxy/datatypes/converters/cml_to_smi_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,426 copying galaxy/datatypes/converters/cram_to_bam_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,427 copying galaxy/datatypes/converters/csv_to_tabular.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,427 copying galaxy/datatypes/converters/fasta_to_2bit.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,427 copying galaxy/datatypes/converters/fasta_to_bowtie_base_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,428 copying galaxy/datatypes/converters/fasta_to_bowtie_color_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,428 copying galaxy/datatypes/converters/fasta_to_fai.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,429 copying galaxy/datatypes/converters/fasta_to_len.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,429 copying galaxy/datatypes/converters/fasta_to_tabular_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,430 copying galaxy/datatypes/converters/fastq_to_fqtoc.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,430 copying galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,431 copying galaxy/datatypes/converters/fastqsolexa_to_qual_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,431 copying galaxy/datatypes/converters/gff_to_bed_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,431 copying galaxy/datatypes/converters/gff_to_fli_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,432 copying galaxy/datatypes/converters/gff_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,432 copying galaxy/datatypes/converters/gro_to_pdb.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,433 copying galaxy/datatypes/converters/gz_to_uncompressed.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,433 copying galaxy/datatypes/converters/inchi_to_mol_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,434 copying galaxy/datatypes/converters/interval_to_bed12_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,434 copying galaxy/datatypes/converters/interval_to_bed6_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,434 copying galaxy/datatypes/converters/interval_to_bed_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,435 copying galaxy/datatypes/converters/interval_to_bedstrict_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,435 copying galaxy/datatypes/converters/interval_to_bgzip_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,435 copying galaxy/datatypes/converters/interval_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,436 copying galaxy/datatypes/converters/interval_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,436 copying galaxy/datatypes/converters/interval_to_tabix_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,439 copying galaxy/datatypes/converters/len_to_linecount.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,443 copying galaxy/datatypes/converters/lped_to_fped_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,446 copying galaxy/datatypes/converters/lped_to_pbed_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,450 copying galaxy/datatypes/converters/maf_to_fasta_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,454 copying galaxy/datatypes/converters/maf_to_interval_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,458 copying galaxy/datatypes/converters/mdconvert.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,462 copying galaxy/datatypes/converters/mol2_to_mol_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,466 copying galaxy/datatypes/converters/molecules_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,471 copying galaxy/datatypes/converters/neostorezip_to_neostore_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,475 copying galaxy/datatypes/converters/parquet_to_csv_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,479 copying galaxy/datatypes/converters/pbed_ldreduced_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,483 copying galaxy/datatypes/converters/pbed_to_lped_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,488 copying galaxy/datatypes/converters/pdb_to_gro.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,491 copying galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,495 copying galaxy/datatypes/converters/pileup_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,499 copying galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,503 copying galaxy/datatypes/converters/sam_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,507 copying galaxy/datatypes/converters/sam_to_unsorted_bam.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,511 copying galaxy/datatypes/converters/smi_to_mol_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,515 copying galaxy/datatypes/converters/smi_to_smi_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,519 copying galaxy/datatypes/converters/tabular_to_csv.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,523 copying galaxy/datatypes/converters/tabular_to_dbnsfp.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,527 copying galaxy/datatypes/converters/tar_to_directory.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,530 copying galaxy/datatypes/converters/to_coordinate_sorted_bam.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,534 copying galaxy/datatypes/converters/to_qname_sorted_bam.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,538 copying galaxy/datatypes/converters/uncompressed_to_gz.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,542 copying galaxy/datatypes/converters/vcf_bgzip_to_tabix_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,546 copying galaxy/datatypes/converters/vcf_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,550 copying galaxy/datatypes/converters/vcf_to_vcf_bgzip_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,553 copying galaxy/datatypes/converters/wig_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,558 copying galaxy/datatypes/converters/wiggle_to_simple_converter.xml -> build/lib/galaxy/datatypes/converters 2023-06-13T17:37:33,562 creating build/lib/galaxy/datatypes/display_applications/configs 2023-06-13T17:37:33,562 creating build/lib/galaxy/datatypes/display_applications/configs/biom 2023-06-13T17:37:33,565 copying galaxy/datatypes/display_applications/configs/biom/biom_simple.xml -> build/lib/galaxy/datatypes/display_applications/configs/biom 2023-06-13T17:37:33,569 creating build/lib/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:33,571 copying galaxy/datatypes/display_applications/configs/ensembl/ensembl_bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:33,575 copying galaxy/datatypes/display_applications/configs/ensembl/ensembl_gff.xml -> build/lib/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:33,579 copying galaxy/datatypes/display_applications/configs/ensembl/ensembl_interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:33,583 creating build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:33,585 copying galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_gff.xml -> build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:33,590 copying galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:33,593 copying galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_wig.xml -> build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:33,598 creating build/lib/galaxy/datatypes/display_applications/configs/icn3d 2023-06-13T17:37:33,600 copying galaxy/datatypes/display_applications/configs/icn3d/icn3d_simple.xml -> build/lib/galaxy/datatypes/display_applications/configs/icn3d 2023-06-13T17:37:33,604 creating build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,606 copying galaxy/datatypes/display_applications/configs/igb/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,610 copying galaxy/datatypes/display_applications/configs/igb/bb.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,614 copying galaxy/datatypes/display_applications/configs/igb/bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,618 copying galaxy/datatypes/display_applications/configs/igb/bedgraph.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,622 copying galaxy/datatypes/display_applications/configs/igb/bigwig.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,626 copying galaxy/datatypes/display_applications/configs/igb/gtf.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,630 copying galaxy/datatypes/display_applications/configs/igb/wig.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:33,634 creating build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,636 copying galaxy/datatypes/display_applications/configs/igv/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,640 copying galaxy/datatypes/display_applications/configs/igv/bigwig.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,644 copying galaxy/datatypes/display_applications/configs/igv/genbank.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,649 copying galaxy/datatypes/display_applications/configs/igv/genome_fasta.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,653 copying galaxy/datatypes/display_applications/configs/igv/gff.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,658 copying galaxy/datatypes/display_applications/configs/igv/interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,662 copying galaxy/datatypes/display_applications/configs/igv/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:33,667 creating build/lib/galaxy/datatypes/display_applications/configs/image 2023-06-13T17:37:33,668 copying galaxy/datatypes/display_applications/configs/image/avivator.xml -> build/lib/galaxy/datatypes/display_applications/configs/image 2023-06-13T17:37:33,673 creating build/lib/galaxy/datatypes/display_applications/configs/intermine 2023-06-13T17:37:33,674 copying galaxy/datatypes/display_applications/configs/intermine/intermine_simple.xml -> build/lib/galaxy/datatypes/display_applications/configs/intermine 2023-06-13T17:37:33,678 creating build/lib/galaxy/datatypes/display_applications/configs/iobio 2023-06-13T17:37:33,680 copying galaxy/datatypes/display_applications/configs/iobio/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/iobio 2023-06-13T17:37:33,685 copying galaxy/datatypes/display_applications/configs/iobio/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/iobio 2023-06-13T17:37:33,689 creating build/lib/galaxy/datatypes/display_applications/configs/minerva 2023-06-13T17:37:33,691 copying galaxy/datatypes/display_applications/configs/minerva/tabular.xml -> build/lib/galaxy/datatypes/display_applications/configs/minerva 2023-06-13T17:37:33,695 creating build/lib/galaxy/datatypes/display_applications/configs/qiime 2023-06-13T17:37:33,696 creating build/lib/galaxy/datatypes/display_applications/configs/qiime/qiime2 2023-06-13T17:37:33,698 copying galaxy/datatypes/display_applications/configs/qiime/qiime2/q2view.xml -> build/lib/galaxy/datatypes/display_applications/configs/qiime/qiime2 2023-06-13T17:37:33,702 creating build/lib/galaxy/datatypes/display_applications/configs/rviewer 2023-06-13T17:37:33,704 copying galaxy/datatypes/display_applications/configs/rviewer/bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/rviewer 2023-06-13T17:37:33,708 copying galaxy/datatypes/display_applications/configs/rviewer/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/rviewer 2023-06-13T17:37:33,712 creating build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,713 copying galaxy/datatypes/display_applications/configs/ucsc/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,717 copying galaxy/datatypes/display_applications/configs/ucsc/bigbed.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,721 copying galaxy/datatypes/display_applications/configs/ucsc/bigwig.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,725 copying galaxy/datatypes/display_applications/configs/ucsc/interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,729 copying galaxy/datatypes/display_applications/configs/ucsc/maf_customtrack.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,733 copying galaxy/datatypes/display_applications/configs/ucsc/trackhub.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,737 copying galaxy/datatypes/display_applications/configs/ucsc/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:33,741 creating build/lib/galaxy/datatypes/display_applications/xsd 2023-06-13T17:37:33,742 copying galaxy/datatypes/display_applications/xsd/geda.xsd -> build/lib/galaxy/datatypes/display_applications/xsd 2023-06-13T17:37:33,747 copying galaxy/model/migrations/README.md -> build/lib/galaxy/model/migrations 2023-06-13T17:37:33,751 copying galaxy/model/migrations/alembic.ini -> build/lib/galaxy/model/migrations 2023-06-13T17:37:33,755 creating build/lib/galaxy/model/migrations/alembic 2023-06-13T17:37:33,757 copying galaxy/model/migrations/alembic/env.py -> build/lib/galaxy/model/migrations/alembic 2023-06-13T17:37:33,762 copying galaxy/model/migrations/alembic/script.py.mako -> build/lib/galaxy/model/migrations/alembic 2023-06-13T17:37:33,766 creating build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,768 copying galaxy/model/migrations/alembic/versions_gxy/186d4835587b_drop_job_state_history_update_time_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,772 copying galaxy/model/migrations/alembic/versions_gxy/3100452fa030_add_workflow_invocation_message_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,776 copying galaxy/model/migrations/alembic/versions_gxy/3a2914d703ca_add_index_wf_r_s_s__workflow_invocation_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,780 copying galaxy/model/migrations/alembic/versions_gxy/518c8438a91b_add_when_expression_column.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,785 copying galaxy/model/migrations/alembic/versions_gxy/59e024ceaca1_add_export_association_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,790 copying galaxy/model/migrations/alembic/versions_gxy/6a67bf27e6a6_deferred_data_tables.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,794 copying galaxy/model/migrations/alembic/versions_gxy/b182f655505f_add_workflow_source_metadata_column.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,798 copying galaxy/model/migrations/alembic/versions_gxy/c39f1de47a04_add_skipped_state_to_collection_job_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,802 copying galaxy/model/migrations/alembic/versions_gxy/caa7742f7bca_add_index_wf_r_i_p__workflow_invocation_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,806 copying galaxy/model/migrations/alembic/versions_gxy/e0e3bb173ee6_add_column_deleted_to_api_keys.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,810 copying galaxy/model/migrations/alembic/versions_gxy/e7b6dcb09efd_create_gxy_branch.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:33,814 creating build/lib/galaxy/model/migrations/alembic/versions_tsi 2023-06-13T17:37:33,816 copying galaxy/model/migrations/alembic/versions_tsi/d4a650f47a3c_create_tsi_branch.py -> build/lib/galaxy/model/migrations/alembic/versions_tsi 2023-06-13T17:37:33,894 installing to build/bdist.linux-armv7l/wheel 2023-06-13T17:37:33,894 running install 2023-06-13T17:37:33,955 running install_lib 2023-06-13T17:37:33,970 creating build/bdist.linux-armv7l 2023-06-13T17:37:33,971 creating build/bdist.linux-armv7l/wheel 2023-06-13T17:37:33,974 creating build/bdist.linux-armv7l/wheel/galaxy 2023-06-13T17:37:33,976 copying build/lib/galaxy/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy 2023-06-13T17:37:33,982 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:33,984 copying build/lib/galaxy/datatypes/gis.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:33,988 copying build/lib/galaxy/datatypes/flow.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:33,992 copying build/lib/galaxy/datatypes/interval.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,000 copying build/lib/galaxy/datatypes/text.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,006 copying build/lib/galaxy/datatypes/annotation.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,010 copying build/lib/galaxy/datatypes/qualityscore.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,018 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,020 copying build/lib/galaxy/datatypes/converters/fasta_to_bowtie_base_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,024 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,028 copying build/lib/galaxy/datatypes/converters/fasta_to_fai.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,032 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_qual_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,035 copying build/lib/galaxy/datatypes/converters/bed_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,039 copying build/lib/galaxy/datatypes/converters/fastq_to_fqtoc.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,042 copying build/lib/galaxy/datatypes/converters/mol2_to_mol_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,046 copying build/lib/galaxy/datatypes/converters/uncompressed_to_gz.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,050 copying build/lib/galaxy/datatypes/converters/smi_to_smi_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,053 copying build/lib/galaxy/datatypes/converters/interval_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,057 copying build/lib/galaxy/datatypes/converters/lped_to_fped_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,061 copying build/lib/galaxy/datatypes/converters/pileup_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,064 copying build/lib/galaxy/datatypes/converters/interval_to_fli.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,068 copying build/lib/galaxy/datatypes/converters/to_coordinate_sorted_bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,072 copying build/lib/galaxy/datatypes/converters/pbed_to_lped_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,075 copying build/lib/galaxy/datatypes/converters/bed_gff_or_vcf_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,079 copying build/lib/galaxy/datatypes/converters/maf_to_interval_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,083 copying build/lib/galaxy/datatypes/converters/gff_to_bed_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,086 copying build/lib/galaxy/datatypes/converters/interval_to_bed_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,090 copying build/lib/galaxy/datatypes/converters/mdconvert.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,094 copying build/lib/galaxy/datatypes/converters/cram_to_bam_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,098 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,101 copying build/lib/galaxy/datatypes/converters/interval_to_bed_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,104 copying build/lib/galaxy/datatypes/converters/pbed_ldreduced_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,109 copying build/lib/galaxy/datatypes/converters/pileup_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,112 copying build/lib/galaxy/datatypes/converters/inchi_to_mol_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,116 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_qual_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,119 copying build/lib/galaxy/datatypes/converters/pdb_to_gro.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,123 copying build/lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,127 copying build/lib/galaxy/datatypes/converters/csv_to_tabular.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,130 copying build/lib/galaxy/datatypes/converters/interval_to_tabix_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,134 copying build/lib/galaxy/datatypes/converters/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,137 copying build/lib/galaxy/datatypes/converters/gz_to_uncompressed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,141 copying build/lib/galaxy/datatypes/converters/bed_to_gff_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,145 copying build/lib/galaxy/datatypes/converters/neostorezip_to_neostore_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,148 copying build/lib/galaxy/datatypes/converters/fastq_to_fqtoc.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,152 copying build/lib/galaxy/datatypes/converters/fasta_to_tabular_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,156 copying build/lib/galaxy/datatypes/converters/lped_to_pbed_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,160 copying build/lib/galaxy/datatypes/converters/interval_to_bgzip_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,165 copying build/lib/galaxy/datatypes/converters/vcf_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,170 copying build/lib/galaxy/datatypes/converters/maf_to_interval_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,174 copying build/lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,178 copying build/lib/galaxy/datatypes/converters/bedgraph_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,182 copying build/lib/galaxy/datatypes/converters/wiggle_to_simple_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,185 copying build/lib/galaxy/datatypes/converters/sam_to_unsorted_bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,189 copying build/lib/galaxy/datatypes/converters/bed_to_gff_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,192 copying build/lib/galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,196 copying build/lib/galaxy/datatypes/converters/interval_to_bed6_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,200 copying build/lib/galaxy/datatypes/converters/parquet_to_csv_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,203 copying build/lib/galaxy/datatypes/converters/molecules_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,208 copying build/lib/galaxy/datatypes/converters/cml_to_smi_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,212 copying build/lib/galaxy/datatypes/converters/fasta_to_len.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,215 copying build/lib/galaxy/datatypes/converters/gff_to_bed_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,219 copying build/lib/galaxy/datatypes/converters/wig_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,223 copying build/lib/galaxy/datatypes/converters/gff_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,227 copying build/lib/galaxy/datatypes/converters/vcf_bgzip_to_tabix_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,231 copying build/lib/galaxy/datatypes/converters/vcf_to_vcf_bgzip_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,234 copying build/lib/galaxy/datatypes/converters/fasta_to_len.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,238 copying build/lib/galaxy/datatypes/converters/bam_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,242 copying build/lib/galaxy/datatypes/converters/tabular_to_csv.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,245 copying build/lib/galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,249 copying build/lib/galaxy/datatypes/converters/lped_to_pbed_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,252 copying build/lib/galaxy/datatypes/converters/bcf_bcf_uncompressed_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,256 copying build/lib/galaxy/datatypes/converters/bed_to_fli_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,260 copying build/lib/galaxy/datatypes/converters/len_to_linecount.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,263 copying build/lib/galaxy/datatypes/converters/interval_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,267 copying build/lib/galaxy/datatypes/converters/vcf_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,270 copying build/lib/galaxy/datatypes/converters/gff_to_fli_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,274 copying build/lib/galaxy/datatypes/converters/lped_to_fped_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,278 copying build/lib/galaxy/datatypes/converters/wiggle_to_simple_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,281 copying build/lib/galaxy/datatypes/converters/gro_to_pdb.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,285 copying build/lib/galaxy/datatypes/converters/fasta_to_tabular_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,288 copying build/lib/galaxy/datatypes/converters/interval_to_bedstrict_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,293 copying build/lib/galaxy/datatypes/converters/pbed_ldreduced_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,296 copying build/lib/galaxy/datatypes/converters/bz2_to_uncompressed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,300 copying build/lib/galaxy/datatypes/converters/to_qname_sorted_bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,303 copying build/lib/galaxy/datatypes/converters/parquet_to_csv_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,306 copying build/lib/galaxy/datatypes/converters/bam_to_bai.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,310 copying build/lib/galaxy/datatypes/converters/fasta_to_bowtie_color_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,313 copying build/lib/galaxy/datatypes/converters/maf_to_fasta_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,317 copying build/lib/galaxy/datatypes/converters/biom.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,320 copying build/lib/galaxy/datatypes/converters/pbed_to_lped_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,324 copying build/lib/galaxy/datatypes/converters/bigwig_to_wig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,327 copying build/lib/galaxy/datatypes/converters/tar_to_directory.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,331 copying build/lib/galaxy/datatypes/converters/fasta_to_2bit.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,334 copying build/lib/galaxy/datatypes/converters/tabular_to_dbnsfp.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,338 copying build/lib/galaxy/datatypes/converters/smi_to_mol_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,341 copying build/lib/galaxy/datatypes/converters/interval_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,344 copying build/lib/galaxy/datatypes/converters/tabular_csv.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,348 copying build/lib/galaxy/datatypes/converters/interval_to_bed12_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,352 copying build/lib/galaxy/datatypes/converters/sam_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,355 copying build/lib/galaxy/datatypes/converters/interval_to_bedstrict_converter.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,360 copying build/lib/galaxy/datatypes/converters/maf_to_fasta_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,364 copying build/lib/galaxy/datatypes/converters/gff_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2023-06-13T17:37:34,367 copying build/lib/galaxy/datatypes/graph.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,371 copying build/lib/galaxy/datatypes/assembly.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,377 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,378 copying build/lib/galaxy/datatypes/dataproviders/external.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,383 copying build/lib/galaxy/datatypes/dataproviders/decorators.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,387 copying build/lib/galaxy/datatypes/dataproviders/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,390 copying build/lib/galaxy/datatypes/dataproviders/chunk.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,394 copying build/lib/galaxy/datatypes/dataproviders/exceptions.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,397 copying build/lib/galaxy/datatypes/dataproviders/hierarchy.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,401 copying build/lib/galaxy/datatypes/dataproviders/dataset.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,407 copying build/lib/galaxy/datatypes/dataproviders/column.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,412 copying build/lib/galaxy/datatypes/dataproviders/line.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,416 copying build/lib/galaxy/datatypes/dataproviders/base.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2023-06-13T17:37:34,420 copying build/lib/galaxy/datatypes/set_metadata_tool.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,423 copying build/lib/galaxy/datatypes/xml.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,428 copying build/lib/galaxy/datatypes/registry.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,436 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications 2023-06-13T17:37:34,437 copying build/lib/galaxy/datatypes/display_applications/parameters.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications 2023-06-13T17:37:34,442 copying build/lib/galaxy/datatypes/display_applications/application.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications 2023-06-13T17:37:34,447 copying build/lib/galaxy/datatypes/display_applications/util.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications 2023-06-13T17:37:34,450 copying build/lib/galaxy/datatypes/display_applications/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications 2023-06-13T17:37:34,455 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs 2023-06-13T17:37:34,458 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/rviewer 2023-06-13T17:37:34,460 copying build/lib/galaxy/datatypes/display_applications/configs/rviewer/bed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/rviewer 2023-06-13T17:37:34,463 copying build/lib/galaxy/datatypes/display_applications/configs/rviewer/vcf.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/rviewer 2023-06-13T17:37:34,468 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,470 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,473 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bedgraph.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,477 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bb.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,480 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,484 copying build/lib/galaxy/datatypes/display_applications/configs/igb/gtf.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,487 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bigwig.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,491 copying build/lib/galaxy/datatypes/display_applications/configs/igb/wig.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2023-06-13T17:37:34,496 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/iobio 2023-06-13T17:37:34,498 copying build/lib/galaxy/datatypes/display_applications/configs/iobio/bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/iobio 2023-06-13T17:37:34,502 copying build/lib/galaxy/datatypes/display_applications/configs/iobio/vcf.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/iobio 2023-06-13T17:37:34,507 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:34,508 copying build/lib/galaxy/datatypes/display_applications/configs/ensembl/ensembl_bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:34,512 copying build/lib/galaxy/datatypes/display_applications/configs/ensembl/ensembl_gff.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:34,516 copying build/lib/galaxy/datatypes/display_applications/configs/ensembl/ensembl_interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ensembl 2023-06-13T17:37:34,521 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:34,522 copying build/lib/galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_gff.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:34,526 copying build/lib/galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_wig.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:34,530 copying build/lib/galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/gbrowse 2023-06-13T17:37:34,534 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/intermine 2023-06-13T17:37:34,536 copying build/lib/galaxy/datatypes/display_applications/configs/intermine/intermine_simple.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/intermine 2023-06-13T17:37:34,541 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,543 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/bigbed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,547 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/trackhub.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,550 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,554 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,558 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/vcf.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,562 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/bigwig.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,566 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/maf_customtrack.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2023-06-13T17:37:34,570 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,572 copying build/lib/galaxy/datatypes/display_applications/configs/igv/gff.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,577 copying build/lib/galaxy/datatypes/display_applications/configs/igv/interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,581 copying build/lib/galaxy/datatypes/display_applications/configs/igv/genbank.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,585 copying build/lib/galaxy/datatypes/display_applications/configs/igv/bam.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,589 copying build/lib/galaxy/datatypes/display_applications/configs/igv/vcf.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,593 copying build/lib/galaxy/datatypes/display_applications/configs/igv/bigwig.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,597 copying build/lib/galaxy/datatypes/display_applications/configs/igv/genome_fasta.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2023-06-13T17:37:34,602 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/minerva 2023-06-13T17:37:34,604 copying build/lib/galaxy/datatypes/display_applications/configs/minerva/tabular.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/minerva 2023-06-13T17:37:34,608 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/qiime 2023-06-13T17:37:34,611 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/qiime/qiime2 2023-06-13T17:37:34,613 copying build/lib/galaxy/datatypes/display_applications/configs/qiime/qiime2/q2view.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/qiime/qiime2 2023-06-13T17:37:34,618 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/biom 2023-06-13T17:37:34,620 copying build/lib/galaxy/datatypes/display_applications/configs/biom/biom_simple.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/biom 2023-06-13T17:37:34,625 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/icn3d 2023-06-13T17:37:34,627 copying build/lib/galaxy/datatypes/display_applications/configs/icn3d/icn3d_simple.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/icn3d 2023-06-13T17:37:34,632 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/image 2023-06-13T17:37:34,634 copying build/lib/galaxy/datatypes/display_applications/configs/image/avivator.xml -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/image 2023-06-13T17:37:34,639 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/xsd 2023-06-13T17:37:34,640 copying build/lib/galaxy/datatypes/display_applications/xsd/geda.xsd -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/xsd 2023-06-13T17:37:34,645 copying build/lib/galaxy/datatypes/microarrays.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,650 copying build/lib/galaxy/datatypes/media.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,654 copying build/lib/galaxy/datatypes/neo4j.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,658 copying build/lib/galaxy/datatypes/isa.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,662 copying build/lib/galaxy/datatypes/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,665 copying build/lib/galaxy/datatypes/phylip.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,670 copying build/lib/galaxy/datatypes/plant_tribes.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,674 copying build/lib/galaxy/datatypes/msa.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,679 copying build/lib/galaxy/datatypes/_schema.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,683 copying build/lib/galaxy/datatypes/sniff.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,689 copying build/lib/galaxy/datatypes/constructive_solid_geometry.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,694 copying build/lib/galaxy/datatypes/proteomics.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,701 copying build/lib/galaxy/datatypes/goldenpath.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,707 copying build/lib/galaxy/datatypes/ngsindex.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,710 copying build/lib/galaxy/datatypes/triples.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,714 copying build/lib/galaxy/datatypes/data.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,721 copying build/lib/galaxy/datatypes/molecules.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,729 copying build/lib/galaxy/datatypes/metadata.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,733 copying build/lib/galaxy/datatypes/hdf5.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,737 copying build/lib/galaxy/datatypes/mothur.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,743 copying build/lib/galaxy/datatypes/checkers.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,748 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/util 2023-06-13T17:37:34,750 copying build/lib/galaxy/datatypes/util/gff_util.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/util 2023-06-13T17:37:34,755 copying build/lib/galaxy/datatypes/util/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/util 2023-06-13T17:37:34,759 copying build/lib/galaxy/datatypes/util/maf_utilities.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/util 2023-06-13T17:37:34,766 copying build/lib/galaxy/datatypes/util/generic_util.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes/util 2023-06-13T17:37:34,770 copying build/lib/galaxy/datatypes/qiime2.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,774 copying build/lib/galaxy/datatypes/blast.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,780 copying build/lib/galaxy/datatypes/speech.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,783 copying build/lib/galaxy/datatypes/upload_util.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,788 copying build/lib/galaxy/datatypes/coverage.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,791 copying build/lib/galaxy/datatypes/tracks.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,795 copying build/lib/galaxy/datatypes/anvio.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,799 copying build/lib/galaxy/datatypes/images.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,804 copying build/lib/galaxy/datatypes/spaln.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,808 copying build/lib/galaxy/datatypes/genetics.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,814 copying build/lib/galaxy/datatypes/sequence.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,822 copying build/lib/galaxy/datatypes/tabular.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,830 copying build/lib/galaxy/datatypes/binary.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,843 copying build/lib/galaxy/datatypes/metacyto.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,847 copying build/lib/galaxy/datatypes/chrominfo.py -> build/bdist.linux-armv7l/wheel/galaxy/datatypes 2023-06-13T17:37:34,852 creating build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:34,855 creating build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,857 copying build/lib/galaxy/model/store/load_objects.py -> build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,861 copying build/lib/galaxy/model/store/discover.py -> build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,868 copying build/lib/galaxy/model/store/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,878 copying build/lib/galaxy/model/store/_bco_convert_utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,881 copying build/lib/galaxy/model/store/build_objects.py -> build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,885 copying build/lib/galaxy/model/store/ro_crate_utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model/store 2023-06-13T17:37:34,890 copying build/lib/galaxy/model/scoped_session.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:34,893 copying build/lib/galaxy/model/database_utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:34,897 copying build/lib/galaxy/model/tags.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:34,903 creating build/bdist.linux-armv7l/wheel/galaxy/model/view 2023-06-13T17:37:34,905 copying build/lib/galaxy/model/view/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/view 2023-06-13T17:37:34,909 copying build/lib/galaxy/model/view/utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model/view 2023-06-13T17:37:34,912 copying build/lib/galaxy/model/search.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:34,919 creating build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,921 copying build/lib/galaxy/model/unittest_utils/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,924 copying build/lib/galaxy/model/unittest_utils/model_testing_utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,929 copying build/lib/galaxy/model/unittest_utils/store_fixtures.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,933 copying build/lib/galaxy/model/unittest_utils/gxy_model_fixtures.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,941 copying build/lib/galaxy/model/unittest_utils/data_app.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,945 copying build/lib/galaxy/model/unittest_utils/mapping_testing_utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,948 copying build/lib/galaxy/model/unittest_utils/tsi_model_fixtures.py -> build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2023-06-13T17:37:34,953 creating build/bdist.linux-armv7l/wheel/galaxy/model/triggers 2023-06-13T17:37:34,954 copying build/lib/galaxy/model/triggers/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/triggers 2023-06-13T17:37:34,958 copying build/lib/galaxy/model/triggers/history_update_time_field.py -> build/bdist.linux-armv7l/wheel/galaxy/model/triggers 2023-06-13T17:37:34,962 copying build/lib/galaxy/model/triggers/update_audit_table.py -> build/bdist.linux-armv7l/wheel/galaxy/model/triggers 2023-06-13T17:37:34,967 copying build/lib/galaxy/model/triggers/utils.py -> build/bdist.linux-armv7l/wheel/galaxy/model/triggers 2023-06-13T17:37:34,970 copying build/lib/galaxy/model/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:34,990 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:34,994 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic 2023-06-13T17:37:34,996 copying build/lib/galaxy/model/migrations/alembic/script.py.mako -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic 2023-06-13T17:37:35,002 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_tsi 2023-06-13T17:37:35,004 copying build/lib/galaxy/model/migrations/alembic/versions_tsi/d4a650f47a3c_create_tsi_branch.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_tsi 2023-06-13T17:37:35,010 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,012 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/59e024ceaca1_add_export_association_table.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,017 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/b182f655505f_add_workflow_source_metadata_column.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,022 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e7b6dcb09efd_create_gxy_branch.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,026 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/3100452fa030_add_workflow_invocation_message_table.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,030 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/186d4835587b_drop_job_state_history_update_time_.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,035 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/caa7742f7bca_add_index_wf_r_i_p__workflow_invocation_.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,039 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/6a67bf27e6a6_deferred_data_tables.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,044 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e0e3bb173ee6_add_column_deleted_to_api_keys.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,048 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/518c8438a91b_add_when_expression_column.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,053 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c39f1de47a04_add_skipped_state_to_collection_job_.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,058 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/3a2914d703ca_add_index_wf_r_s_s__workflow_invocation_.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2023-06-13T17:37:35,062 copying build/lib/galaxy/model/migrations/alembic/env.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic 2023-06-13T17:37:35,067 copying build/lib/galaxy/model/migrations/dbscript.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:35,072 copying build/lib/galaxy/model/migrations/util.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:35,076 copying build/lib/galaxy/model/migrations/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:35,082 copying build/lib/galaxy/model/migrations/scripts.py -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:35,087 copying build/lib/galaxy/model/migrations/alembic.ini -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:35,091 copying build/lib/galaxy/model/migrations/README.md -> build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2023-06-13T17:37:35,096 creating build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,098 copying build/lib/galaxy/model/dataset_collections/registry.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,103 copying build/lib/galaxy/model/dataset_collections/matching.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,109 creating build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections/types 2023-06-13T17:37:35,111 copying build/lib/galaxy/model/dataset_collections/types/list.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections/types 2023-06-13T17:37:35,115 copying build/lib/galaxy/model/dataset_collections/types/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections/types 2023-06-13T17:37:35,119 copying build/lib/galaxy/model/dataset_collections/types/paired.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections/types 2023-06-13T17:37:35,123 copying build/lib/galaxy/model/dataset_collections/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,126 copying build/lib/galaxy/model/dataset_collections/type_description.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,130 copying build/lib/galaxy/model/dataset_collections/builder.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,134 copying build/lib/galaxy/model/dataset_collections/subcollections.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,137 copying build/lib/galaxy/model/dataset_collections/structure.py -> build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2023-06-13T17:37:35,141 copying build/lib/galaxy/model/item_attrs.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,147 creating build/bdist.linux-armv7l/wheel/galaxy/model/tool_shed_install 2023-06-13T17:37:35,148 copying build/lib/galaxy/model/tool_shed_install/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/tool_shed_install 2023-06-13T17:37:35,154 copying build/lib/galaxy/model/tool_shed_install/mapping.py -> build/bdist.linux-armv7l/wheel/galaxy/model/tool_shed_install 2023-06-13T17:37:35,157 copying build/lib/galaxy/model/index_filter_util.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,161 copying build/lib/galaxy/model/mapping.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,164 copying build/lib/galaxy/model/deferred.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,169 copying build/lib/galaxy/model/metadata.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,175 copying build/lib/galaxy/model/none_like.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,179 copying build/lib/galaxy/model/custom_types.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,184 copying build/lib/galaxy/model/database_heartbeat.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,188 copying build/lib/galaxy/model/base.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,194 creating build/bdist.linux-armv7l/wheel/galaxy/model/orm 2023-06-13T17:37:35,196 copying build/lib/galaxy/model/orm/util.py -> build/bdist.linux-armv7l/wheel/galaxy/model/orm 2023-06-13T17:37:35,200 copying build/lib/galaxy/model/orm/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/model/orm 2023-06-13T17:37:35,204 copying build/lib/galaxy/model/orm/scripts.py -> build/bdist.linux-armv7l/wheel/galaxy/model/orm 2023-06-13T17:37:35,209 copying build/lib/galaxy/model/orm/now.py -> build/bdist.linux-armv7l/wheel/galaxy/model/orm 2023-06-13T17:37:35,213 copying build/lib/galaxy/model/orm/engine_factory.py -> build/bdist.linux-armv7l/wheel/galaxy/model/orm 2023-06-13T17:37:35,218 copying build/lib/galaxy/model/security.py -> build/bdist.linux-armv7l/wheel/galaxy/model 2023-06-13T17:37:35,227 creating build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,228 copying build/lib/galaxy/security/ssh_util.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,232 copying build/lib/galaxy/security/vault.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,237 copying build/lib/galaxy/security/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,242 copying build/lib/galaxy/security/validate_user_input.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,246 copying build/lib/galaxy/security/idencoding.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,250 copying build/lib/galaxy/security/passwords.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,254 copying build/lib/galaxy/security/object_wrapper.py -> build/bdist.linux-armv7l/wheel/galaxy/security 2023-06-13T17:37:35,259 creating build/bdist.linux-armv7l/wheel/galaxy/quota 2023-06-13T17:37:35,261 copying build/lib/galaxy/quota/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/quota 2023-06-13T17:37:35,266 copying build/lib/galaxy/quota/_schema.py -> build/bdist.linux-armv7l/wheel/galaxy/quota 2023-06-13T17:37:35,270 copying build/lib/galaxy/py.typed -> build/bdist.linux-armv7l/wheel/galaxy 2023-06-13T17:37:35,274 creating build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,276 copying build/lib/galaxy/schema/invocation.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,281 copying build/lib/galaxy/schema/types.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,284 copying build/lib/galaxy/schema/schema.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,293 copying build/lib/galaxy/schema/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,298 creating build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,300 copying build/lib/galaxy/schema/drs/Checksum.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,304 copying build/lib/galaxy/schema/drs/DrsService.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,308 copying build/lib/galaxy/schema/drs/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,312 copying build/lib/galaxy/schema/drs/AccessURL.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,315 copying build/lib/galaxy/schema/drs/ContentsObject.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,319 copying build/lib/galaxy/schema/drs/DrsObject.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,323 copying build/lib/galaxy/schema/drs/Error.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,326 copying build/lib/galaxy/schema/drs/AccessMethod.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,330 copying build/lib/galaxy/schema/drs/Service.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/drs 2023-06-13T17:37:35,333 copying build/lib/galaxy/schema/fields.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,337 copying build/lib/galaxy/schema/fetch_data.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,341 copying build/lib/galaxy/schema/tasks.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,344 copying build/lib/galaxy/schema/remote_files.py -> build/bdist.linux-armv7l/wheel/galaxy/schema 2023-06-13T17:37:35,349 creating build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,351 copying build/lib/galaxy/schema/bco/usability_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,354 copying build/lib/galaxy/schema/bco/parametric_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,358 copying build/lib/galaxy/schema/bco/util.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,362 copying build/lib/galaxy/schema/bco/io_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,365 copying build/lib/galaxy/schema/bco/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,369 copying build/lib/galaxy/schema/bco/execution_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,373 copying build/lib/galaxy/schema/bco/provenance_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,377 copying build/lib/galaxy/schema/bco/description_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,381 copying build/lib/galaxy/schema/bco/error_domain.py -> build/bdist.linux-armv7l/wheel/galaxy/schema/bco 2023-06-13T17:37:35,384 running install_egg_info 2023-06-13T17:37:35,407 Copying galaxy_data.egg-info to build/bdist.linux-armv7l/wheel/galaxy_data-23.0.2-py3.7.egg-info 2023-06-13T17:37:35,431 running install_scripts 2023-06-13T17:37:35,483 creating build/bdist.linux-armv7l/wheel/galaxy_data-23.0.2.dist-info/WHEEL 2023-06-13T17:37:35,489 creating '/tmp/pip-wheel-1zr9054i/.tmp-xxw40td_/galaxy_data-23.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-13T17:37:35,494 adding 'galaxy/__init__.py' 2023-06-13T17:37:35,496 adding 'galaxy/py.typed' 2023-06-13T17:37:35,501 adding 'galaxy/datatypes/__init__.py' 2023-06-13T17:37:35,505 adding 'galaxy/datatypes/_schema.py' 2023-06-13T17:37:35,507 adding 'galaxy/datatypes/annotation.py' 2023-06-13T17:37:35,511 adding 'galaxy/datatypes/anvio.py' 2023-06-13T17:37:35,515 adding 'galaxy/datatypes/assembly.py' 2023-06-13T17:37:35,548 adding 'galaxy/datatypes/binary.py' 2023-06-13T17:37:35,557 adding 'galaxy/datatypes/blast.py' 2023-06-13T17:37:35,560 adding 'galaxy/datatypes/checkers.py' 2023-06-13T17:37:35,562 adding 'galaxy/datatypes/chrominfo.py' 2023-06-13T17:37:35,570 adding 'galaxy/datatypes/constructive_solid_geometry.py' 2023-06-13T17:37:35,573 adding 'galaxy/datatypes/coverage.py' 2023-06-13T17:37:35,590 adding 'galaxy/datatypes/data.py' 2023-06-13T17:37:35,594 adding 'galaxy/datatypes/flow.py' 2023-06-13T17:37:35,605 adding 'galaxy/datatypes/genetics.py' 2023-06-13T17:37:35,609 adding 'galaxy/datatypes/gis.py' 2023-06-13T17:37:35,615 adding 'galaxy/datatypes/goldenpath.py' 2023-06-13T17:37:35,618 adding 'galaxy/datatypes/graph.py' 2023-06-13T17:37:35,621 adding 'galaxy/datatypes/hdf5.py' 2023-06-13T17:37:35,626 adding 'galaxy/datatypes/images.py' 2023-06-13T17:37:35,645 adding 'galaxy/datatypes/interval.py' 2023-06-13T17:37:35,651 adding 'galaxy/datatypes/isa.py' 2023-06-13T17:37:35,656 adding 'galaxy/datatypes/media.py' 2023-06-13T17:37:35,658 adding 'galaxy/datatypes/metacyto.py' 2023-06-13T17:37:35,661 adding 'galaxy/datatypes/metadata.py' 2023-06-13T17:37:35,664 adding 'galaxy/datatypes/microarrays.py' 2023-06-13T17:37:35,678 adding 'galaxy/datatypes/molecules.py' 2023-06-13T17:37:35,687 adding 'galaxy/datatypes/mothur.py' 2023-06-13T17:37:35,691 adding 'galaxy/datatypes/msa.py' 2023-06-13T17:37:35,694 adding 'galaxy/datatypes/neo4j.py' 2023-06-13T17:37:35,697 adding 'galaxy/datatypes/ngsindex.py' 2023-06-13T17:37:35,701 adding 'galaxy/datatypes/phylip.py' 2023-06-13T17:37:35,704 adding 'galaxy/datatypes/plant_tribes.py' 2023-06-13T17:37:35,713 adding 'galaxy/datatypes/proteomics.py' 2023-06-13T17:37:35,718 adding 'galaxy/datatypes/qiime2.py' 2023-06-13T17:37:35,721 adding 'galaxy/datatypes/qualityscore.py' 2023-06-13T17:37:35,734 adding 'galaxy/datatypes/registry.py' 2023-06-13T17:37:35,750 adding 'galaxy/datatypes/sequence.py' 2023-06-13T17:37:35,754 adding 'galaxy/datatypes/set_metadata_tool.xml' 2023-06-13T17:37:35,764 adding 'galaxy/datatypes/sniff.py' 2023-06-13T17:37:35,768 adding 'galaxy/datatypes/spaln.py' 2023-06-13T17:37:35,771 adding 'galaxy/datatypes/speech.py' 2023-06-13T17:37:35,793 adding 'galaxy/datatypes/tabular.py' 2023-06-13T17:37:35,806 adding 'galaxy/datatypes/text.py' 2023-06-13T17:37:35,810 adding 'galaxy/datatypes/tracks.py' 2023-06-13T17:37:35,813 adding 'galaxy/datatypes/triples.py' 2023-06-13T17:37:35,816 adding 'galaxy/datatypes/upload_util.py' 2023-06-13T17:37:35,820 adding 'galaxy/datatypes/xml.py' 2023-06-13T17:37:35,828 adding 'galaxy/datatypes/converters/__init__.py' 2023-06-13T17:37:35,832 adding 'galaxy/datatypes/converters/bam_to_bai.xml' 2023-06-13T17:37:35,834 adding 'galaxy/datatypes/converters/bam_to_bigwig_converter.xml' 2023-06-13T17:37:35,837 adding 'galaxy/datatypes/converters/bcf_bcf_uncompressed_converter.xml' 2023-06-13T17:37:35,840 adding 'galaxy/datatypes/converters/bed_gff_or_vcf_to_bigwig_converter.xml' 2023-06-13T17:37:35,842 adding 'galaxy/datatypes/converters/bed_to_fli_converter.xml' 2023-06-13T17:37:35,845 adding 'galaxy/datatypes/converters/bed_to_gff_converter.py' 2023-06-13T17:37:35,848 adding 'galaxy/datatypes/converters/bed_to_gff_converter.xml' 2023-06-13T17:37:35,850 adding 'galaxy/datatypes/converters/bed_to_interval_index_converter.xml' 2023-06-13T17:37:35,853 adding 'galaxy/datatypes/converters/bedgraph_to_bigwig_converter.xml' 2023-06-13T17:37:35,856 adding 'galaxy/datatypes/converters/bigwig_to_wig_converter.xml' 2023-06-13T17:37:35,858 adding 'galaxy/datatypes/converters/biom.xml' 2023-06-13T17:37:35,861 adding 'galaxy/datatypes/converters/bz2_to_uncompressed.xml' 2023-06-13T17:37:35,864 adding 'galaxy/datatypes/converters/cml_to_smi_converter.xml' 2023-06-13T17:37:35,867 adding 'galaxy/datatypes/converters/cram_to_bam_converter.xml' 2023-06-13T17:37:35,870 adding 'galaxy/datatypes/converters/csv_to_tabular.xml' 2023-06-13T17:37:35,872 adding 'galaxy/datatypes/converters/fasta_to_2bit.xml' 2023-06-13T17:37:35,875 adding 'galaxy/datatypes/converters/fasta_to_bowtie_base_index_converter.xml' 2023-06-13T17:37:35,878 adding 'galaxy/datatypes/converters/fasta_to_bowtie_color_index_converter.xml' 2023-06-13T17:37:35,881 adding 'galaxy/datatypes/converters/fasta_to_fai.xml' 2023-06-13T17:37:35,884 adding 'galaxy/datatypes/converters/fasta_to_len.py' 2023-06-13T17:37:35,886 adding 'galaxy/datatypes/converters/fasta_to_len.xml' 2023-06-13T17:37:35,889 adding 'galaxy/datatypes/converters/fasta_to_tabular_converter.py' 2023-06-13T17:37:35,891 adding 'galaxy/datatypes/converters/fasta_to_tabular_converter.xml' 2023-06-13T17:37:35,894 adding 'galaxy/datatypes/converters/fastq_to_fqtoc.py' 2023-06-13T17:37:35,897 adding 'galaxy/datatypes/converters/fastq_to_fqtoc.xml' 2023-06-13T17:37:35,899 adding 'galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.py' 2023-06-13T17:37:35,902 adding 'galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.xml' 2023-06-13T17:37:35,905 adding 'galaxy/datatypes/converters/fastqsolexa_to_qual_converter.py' 2023-06-13T17:37:35,907 adding 'galaxy/datatypes/converters/fastqsolexa_to_qual_converter.xml' 2023-06-13T17:37:35,910 adding 'galaxy/datatypes/converters/gff_to_bed_converter.py' 2023-06-13T17:37:35,913 adding 'galaxy/datatypes/converters/gff_to_bed_converter.xml' 2023-06-13T17:37:35,915 adding 'galaxy/datatypes/converters/gff_to_fli_converter.xml' 2023-06-13T17:37:35,918 adding 'galaxy/datatypes/converters/gff_to_interval_index_converter.py' 2023-06-13T17:37:35,920 adding 'galaxy/datatypes/converters/gff_to_interval_index_converter.xml' 2023-06-13T17:37:35,923 adding 'galaxy/datatypes/converters/gro_to_pdb.xml' 2023-06-13T17:37:35,926 adding 'galaxy/datatypes/converters/gz_to_uncompressed.xml' 2023-06-13T17:37:35,928 adding 'galaxy/datatypes/converters/inchi_to_mol_converter.xml' 2023-06-13T17:37:35,931 adding 'galaxy/datatypes/converters/interval_to_bed12_converter.xml' 2023-06-13T17:37:35,933 adding 'galaxy/datatypes/converters/interval_to_bed6_converter.xml' 2023-06-13T17:37:35,936 adding 'galaxy/datatypes/converters/interval_to_bed_converter.py' 2023-06-13T17:37:35,939 adding 'galaxy/datatypes/converters/interval_to_bed_converter.xml' 2023-06-13T17:37:35,942 adding 'galaxy/datatypes/converters/interval_to_bedstrict_converter.py' 2023-06-13T17:37:35,945 adding 'galaxy/datatypes/converters/interval_to_bedstrict_converter.xml' 2023-06-13T17:37:35,948 adding 'galaxy/datatypes/converters/interval_to_bgzip_converter.xml' 2023-06-13T17:37:35,951 adding 'galaxy/datatypes/converters/interval_to_bigwig_converter.xml' 2023-06-13T17:37:35,954 adding 'galaxy/datatypes/converters/interval_to_fli.py' 2023-06-13T17:37:35,957 adding 'galaxy/datatypes/converters/interval_to_interval_index_converter.py' 2023-06-13T17:37:35,959 adding 'galaxy/datatypes/converters/interval_to_interval_index_converter.xml' 2023-06-13T17:37:35,962 adding 'galaxy/datatypes/converters/interval_to_tabix_converter.xml' 2023-06-13T17:37:35,965 adding 'galaxy/datatypes/converters/len_to_linecount.xml' 2023-06-13T17:37:35,968 adding 'galaxy/datatypes/converters/lped_to_fped_converter.py' 2023-06-13T17:37:35,970 adding 'galaxy/datatypes/converters/lped_to_fped_converter.xml' 2023-06-13T17:37:35,974 adding 'galaxy/datatypes/converters/lped_to_pbed_converter.py' 2023-06-13T17:37:35,977 adding 'galaxy/datatypes/converters/lped_to_pbed_converter.xml' 2023-06-13T17:37:35,979 adding 'galaxy/datatypes/converters/maf_to_fasta_converter.py' 2023-06-13T17:37:35,982 adding 'galaxy/datatypes/converters/maf_to_fasta_converter.xml' 2023-06-13T17:37:35,984 adding 'galaxy/datatypes/converters/maf_to_interval_converter.py' 2023-06-13T17:37:35,987 adding 'galaxy/datatypes/converters/maf_to_interval_converter.xml' 2023-06-13T17:37:35,990 adding 'galaxy/datatypes/converters/mdconvert.xml' 2023-06-13T17:37:35,993 adding 'galaxy/datatypes/converters/mol2_to_mol_converter.xml' 2023-06-13T17:37:35,996 adding 'galaxy/datatypes/converters/molecules_converter.xml' 2023-06-13T17:37:35,999 adding 'galaxy/datatypes/converters/neostorezip_to_neostore_converter.xml' 2023-06-13T17:37:36,001 adding 'galaxy/datatypes/converters/parquet_to_csv_converter.py' 2023-06-13T17:37:36,004 adding 'galaxy/datatypes/converters/parquet_to_csv_converter.xml' 2023-06-13T17:37:36,007 adding 'galaxy/datatypes/converters/pbed_ldreduced_converter.py' 2023-06-13T17:37:36,010 adding 'galaxy/datatypes/converters/pbed_ldreduced_converter.xml' 2023-06-13T17:37:36,012 adding 'galaxy/datatypes/converters/pbed_to_lped_converter.py' 2023-06-13T17:37:36,015 adding 'galaxy/datatypes/converters/pbed_to_lped_converter.xml' 2023-06-13T17:37:36,018 adding 'galaxy/datatypes/converters/pdb_to_gro.xml' 2023-06-13T17:37:36,020 adding 'galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py' 2023-06-13T17:37:36,023 adding 'galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.xml' 2023-06-13T17:37:36,026 adding 'galaxy/datatypes/converters/pileup_to_interval_index_converter.py' 2023-06-13T17:37:36,028 adding 'galaxy/datatypes/converters/pileup_to_interval_index_converter.xml' 2023-06-13T17:37:36,031 adding 'galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py' 2023-06-13T17:37:36,033 adding 'galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml' 2023-06-13T17:37:36,036 adding 'galaxy/datatypes/converters/sam_to_bigwig_converter.xml' 2023-06-13T17:37:36,039 adding 'galaxy/datatypes/converters/sam_to_unsorted_bam.xml' 2023-06-13T17:37:36,041 adding 'galaxy/datatypes/converters/smi_to_mol_converter.xml' 2023-06-13T17:37:36,044 adding 'galaxy/datatypes/converters/smi_to_smi_converter.xml' 2023-06-13T17:37:36,046 adding 'galaxy/datatypes/converters/tabular_csv.py' 2023-06-13T17:37:36,049 adding 'galaxy/datatypes/converters/tabular_to_csv.xml' 2023-06-13T17:37:36,051 adding 'galaxy/datatypes/converters/tabular_to_dbnsfp.xml' 2023-06-13T17:37:36,054 adding 'galaxy/datatypes/converters/tar_to_directory.xml' 2023-06-13T17:37:36,057 adding 'galaxy/datatypes/converters/to_coordinate_sorted_bam.xml' 2023-06-13T17:37:36,059 adding 'galaxy/datatypes/converters/to_qname_sorted_bam.xml' 2023-06-13T17:37:36,062 adding 'galaxy/datatypes/converters/uncompressed_to_gz.xml' 2023-06-13T17:37:36,065 adding 'galaxy/datatypes/converters/vcf_bgzip_to_tabix_converter.xml' 2023-06-13T17:37:36,067 adding 'galaxy/datatypes/converters/vcf_to_interval_index_converter.py' 2023-06-13T17:37:36,070 adding 'galaxy/datatypes/converters/vcf_to_interval_index_converter.xml' 2023-06-13T17:37:36,072 adding 'galaxy/datatypes/converters/vcf_to_vcf_bgzip_converter.xml' 2023-06-13T17:37:36,075 adding 'galaxy/datatypes/converters/wig_to_bigwig_converter.xml' 2023-06-13T17:37:36,078 adding 'galaxy/datatypes/converters/wiggle_to_simple_converter.py' 2023-06-13T17:37:36,080 adding 'galaxy/datatypes/converters/wiggle_to_simple_converter.xml' 2023-06-13T17:37:36,084 adding 'galaxy/datatypes/dataproviders/__init__.py' 2023-06-13T17:37:36,089 adding 'galaxy/datatypes/dataproviders/base.py' 2023-06-13T17:37:36,092 adding 'galaxy/datatypes/dataproviders/chunk.py' 2023-06-13T17:37:36,097 adding 'galaxy/datatypes/dataproviders/column.py' 2023-06-13T17:37:36,106 adding 'galaxy/datatypes/dataproviders/dataset.py' 2023-06-13T17:37:36,110 adding 'galaxy/datatypes/dataproviders/decorators.py' 2023-06-13T17:37:36,113 adding 'galaxy/datatypes/dataproviders/exceptions.py' 2023-06-13T17:37:36,116 adding 'galaxy/datatypes/dataproviders/external.py' 2023-06-13T17:37:36,119 adding 'galaxy/datatypes/dataproviders/hierarchy.py' 2023-06-13T17:37:36,124 adding 'galaxy/datatypes/dataproviders/line.py' 2023-06-13T17:37:36,128 adding 'galaxy/datatypes/display_applications/__init__.py' 2023-06-13T17:37:36,133 adding 'galaxy/datatypes/display_applications/application.py' 2023-06-13T17:37:36,137 adding 'galaxy/datatypes/display_applications/parameters.py' 2023-06-13T17:37:36,140 adding 'galaxy/datatypes/display_applications/util.py' 2023-06-13T17:37:36,146 adding 'galaxy/datatypes/display_applications/configs/biom/biom_simple.xml' 2023-06-13T17:37:36,150 adding 'galaxy/datatypes/display_applications/configs/ensembl/ensembl_bam.xml' 2023-06-13T17:37:36,153 adding 'galaxy/datatypes/display_applications/configs/ensembl/ensembl_gff.xml' 2023-06-13T17:37:36,157 adding 'galaxy/datatypes/display_applications/configs/ensembl/ensembl_interval_as_bed.xml' 2023-06-13T17:37:36,162 adding 'galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_gff.xml' 2023-06-13T17:37:36,165 adding 'galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_interval_as_bed.xml' 2023-06-13T17:37:36,168 adding 'galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_wig.xml' 2023-06-13T17:37:36,171 adding 'galaxy/datatypes/display_applications/configs/icn3d/icn3d_simple.xml' 2023-06-13T17:37:36,175 adding 'galaxy/datatypes/display_applications/configs/igb/bam.xml' 2023-06-13T17:37:36,178 adding 'galaxy/datatypes/display_applications/configs/igb/bb.xml' 2023-06-13T17:37:36,180 adding 'galaxy/datatypes/display_applications/configs/igb/bed.xml' 2023-06-13T17:37:36,183 adding 'galaxy/datatypes/display_applications/configs/igb/bedgraph.xml' 2023-06-13T17:37:36,186 adding 'galaxy/datatypes/display_applications/configs/igb/bigwig.xml' 2023-06-13T17:37:36,188 adding 'galaxy/datatypes/display_applications/configs/igb/gtf.xml' 2023-06-13T17:37:36,191 adding 'galaxy/datatypes/display_applications/configs/igb/wig.xml' 2023-06-13T17:37:36,195 adding 'galaxy/datatypes/display_applications/configs/igv/bam.xml' 2023-06-13T17:37:36,198 adding 'galaxy/datatypes/display_applications/configs/igv/bigwig.xml' 2023-06-13T17:37:36,202 adding 'galaxy/datatypes/display_applications/configs/igv/genbank.xml' 2023-06-13T17:37:36,205 adding 'galaxy/datatypes/display_applications/configs/igv/genome_fasta.xml' 2023-06-13T17:37:36,208 adding 'galaxy/datatypes/display_applications/configs/igv/gff.xml' 2023-06-13T17:37:36,211 adding 'galaxy/datatypes/display_applications/configs/igv/interval_as_bed.xml' 2023-06-13T17:37:36,215 adding 'galaxy/datatypes/display_applications/configs/igv/vcf.xml' 2023-06-13T17:37:36,218 adding 'galaxy/datatypes/display_applications/configs/image/avivator.xml' 2023-06-13T17:37:36,222 adding 'galaxy/datatypes/display_applications/configs/intermine/intermine_simple.xml' 2023-06-13T17:37:36,225 adding 'galaxy/datatypes/display_applications/configs/iobio/bam.xml' 2023-06-13T17:37:36,228 adding 'galaxy/datatypes/display_applications/configs/iobio/vcf.xml' 2023-06-13T17:37:36,231 adding 'galaxy/datatypes/display_applications/configs/minerva/tabular.xml' 2023-06-13T17:37:36,236 adding 'galaxy/datatypes/display_applications/configs/qiime/qiime2/q2view.xml' 2023-06-13T17:37:36,239 adding 'galaxy/datatypes/display_applications/configs/rviewer/bed.xml' 2023-06-13T17:37:36,242 adding 'galaxy/datatypes/display_applications/configs/rviewer/vcf.xml' 2023-06-13T17:37:36,246 adding 'galaxy/datatypes/display_applications/configs/ucsc/bam.xml' 2023-06-13T17:37:36,249 adding 'galaxy/datatypes/display_applications/configs/ucsc/bigbed.xml' 2023-06-13T17:37:36,251 adding 'galaxy/datatypes/display_applications/configs/ucsc/bigwig.xml' 2023-06-13T17:37:36,254 adding 'galaxy/datatypes/display_applications/configs/ucsc/interval_as_bed.xml' 2023-06-13T17:37:36,257 adding 'galaxy/datatypes/display_applications/configs/ucsc/maf_customtrack.xml' 2023-06-13T17:37:36,259 adding 'galaxy/datatypes/display_applications/configs/ucsc/trackhub.xml' 2023-06-13T17:37:36,262 adding 'galaxy/datatypes/display_applications/configs/ucsc/vcf.xml' 2023-06-13T17:37:36,267 adding 'galaxy/datatypes/display_applications/xsd/geda.xsd' 2023-06-13T17:37:36,271 adding 'galaxy/datatypes/util/__init__.py' 2023-06-13T17:37:36,273 adding 'galaxy/datatypes/util/generic_util.py' 2023-06-13T17:37:36,279 adding 'galaxy/datatypes/util/gff_util.py' 2023-06-13T17:37:36,289 adding 'galaxy/datatypes/util/maf_utilities.py' 2023-06-13T17:37:36,392 adding 'galaxy/model/__init__.py' 2023-06-13T17:37:36,404 adding 'galaxy/model/base.py' 2023-06-13T17:37:36,409 adding 'galaxy/model/custom_types.py' 2023-06-13T17:37:36,412 adding 'galaxy/model/database_heartbeat.py' 2023-06-13T17:37:36,415 adding 'galaxy/model/database_utils.py' 2023-06-13T17:37:36,420 adding 'galaxy/model/deferred.py' 2023-06-13T17:37:36,423 adding 'galaxy/model/index_filter_util.py' 2023-06-13T17:37:36,426 adding 'galaxy/model/item_attrs.py' 2023-06-13T17:37:36,429 adding 'galaxy/model/mapping.py' 2023-06-13T17:37:36,438 adding 'galaxy/model/metadata.py' 2023-06-13T17:37:36,441 adding 'galaxy/model/none_like.py' 2023-06-13T17:37:36,444 adding 'galaxy/model/scoped_session.py' 2023-06-13T17:37:36,450 adding 'galaxy/model/search.py' 2023-06-13T17:37:36,473 adding 'galaxy/model/security.py' 2023-06-13T17:37:36,480 adding 'galaxy/model/tags.py' 2023-06-13T17:37:36,485 adding 'galaxy/model/dataset_collections/__init__.py' 2023-06-13T17:37:36,488 adding 'galaxy/model/dataset_collections/builder.py' 2023-06-13T17:37:36,492 adding 'galaxy/model/dataset_collections/matching.py' 2023-06-13T17:37:36,494 adding 'galaxy/model/dataset_collections/registry.py' 2023-06-13T17:37:36,498 adding 'galaxy/model/dataset_collections/structure.py' 2023-06-13T17:37:36,501 adding 'galaxy/model/dataset_collections/subcollections.py' 2023-06-13T17:37:36,504 adding 'galaxy/model/dataset_collections/type_description.py' 2023-06-13T17:37:36,508 adding 'galaxy/model/dataset_collections/types/__init__.py' 2023-06-13T17:37:36,510 adding 'galaxy/model/dataset_collections/types/list.py' 2023-06-13T17:37:36,513 adding 'galaxy/model/dataset_collections/types/paired.py' 2023-06-13T17:37:36,517 adding 'galaxy/model/migrations/README.md' 2023-06-13T17:37:36,523 adding 'galaxy/model/migrations/__init__.py' 2023-06-13T17:37:36,526 adding 'galaxy/model/migrations/alembic.ini' 2023-06-13T17:37:36,530 adding 'galaxy/model/migrations/dbscript.py' 2023-06-13T17:37:36,535 adding 'galaxy/model/migrations/scripts.py' 2023-06-13T17:37:36,538 adding 'galaxy/model/migrations/util.py' 2023-06-13T17:37:36,542 adding 'galaxy/model/migrations/alembic/env.py' 2023-06-13T17:37:36,545 adding 'galaxy/model/migrations/alembic/script.py.mako' 2023-06-13T17:37:36,549 adding 'galaxy/model/migrations/alembic/versions_gxy/186d4835587b_drop_job_state_history_update_time_.py' 2023-06-13T17:37:36,552 adding 'galaxy/model/migrations/alembic/versions_gxy/3100452fa030_add_workflow_invocation_message_table.py' 2023-06-13T17:37:36,554 adding 'galaxy/model/migrations/alembic/versions_gxy/3a2914d703ca_add_index_wf_r_s_s__workflow_invocation_.py' 2023-06-13T17:37:36,557 adding 'galaxy/model/migrations/alembic/versions_gxy/518c8438a91b_add_when_expression_column.py' 2023-06-13T17:37:36,560 adding 'galaxy/model/migrations/alembic/versions_gxy/59e024ceaca1_add_export_association_table.py' 2023-06-13T17:37:36,562 adding 'galaxy/model/migrations/alembic/versions_gxy/6a67bf27e6a6_deferred_data_tables.py' 2023-06-13T17:37:36,565 adding 'galaxy/model/migrations/alembic/versions_gxy/b182f655505f_add_workflow_source_metadata_column.py' 2023-06-13T17:37:36,568 adding 'galaxy/model/migrations/alembic/versions_gxy/c39f1de47a04_add_skipped_state_to_collection_job_.py' 2023-06-13T17:37:36,571 adding 'galaxy/model/migrations/alembic/versions_gxy/caa7742f7bca_add_index_wf_r_i_p__workflow_invocation_.py' 2023-06-13T17:37:36,573 adding 'galaxy/model/migrations/alembic/versions_gxy/e0e3bb173ee6_add_column_deleted_to_api_keys.py' 2023-06-13T17:37:36,576 adding 'galaxy/model/migrations/alembic/versions_gxy/e7b6dcb09efd_create_gxy_branch.py' 2023-06-13T17:37:36,579 adding 'galaxy/model/migrations/alembic/versions_tsi/d4a650f47a3c_create_tsi_branch.py' 2023-06-13T17:37:36,583 adding 'galaxy/model/orm/__init__.py' 2023-06-13T17:37:36,586 adding 'galaxy/model/orm/engine_factory.py' 2023-06-13T17:37:36,589 adding 'galaxy/model/orm/now.py' 2023-06-13T17:37:36,592 adding 'galaxy/model/orm/scripts.py' 2023-06-13T17:37:36,595 adding 'galaxy/model/orm/util.py' 2023-06-13T17:37:36,631 adding 'galaxy/model/store/__init__.py' 2023-06-13T17:37:36,636 adding 'galaxy/model/store/_bco_convert_utils.py' 2023-06-13T17:37:36,640 adding 'galaxy/model/store/build_objects.py' 2023-06-13T17:37:36,650 adding 'galaxy/model/store/discover.py' 2023-06-13T17:37:36,654 adding 'galaxy/model/store/load_objects.py' 2023-06-13T17:37:36,659 adding 'galaxy/model/store/ro_crate_utils.py' 2023-06-13T17:37:36,668 adding 'galaxy/model/tool_shed_install/__init__.py' 2023-06-13T17:37:36,671 adding 'galaxy/model/tool_shed_install/mapping.py' 2023-06-13T17:37:36,674 adding 'galaxy/model/triggers/__init__.py' 2023-06-13T17:37:36,678 adding 'galaxy/model/triggers/history_update_time_field.py' 2023-06-13T17:37:36,681 adding 'galaxy/model/triggers/update_audit_table.py' 2023-06-13T17:37:36,684 adding 'galaxy/model/triggers/utils.py' 2023-06-13T17:37:36,687 adding 'galaxy/model/unittest_utils/__init__.py' 2023-06-13T17:37:36,690 adding 'galaxy/model/unittest_utils/data_app.py' 2023-06-13T17:37:36,696 adding 'galaxy/model/unittest_utils/gxy_model_fixtures.py' 2023-06-13T17:37:36,700 adding 'galaxy/model/unittest_utils/mapping_testing_utils.py' 2023-06-13T17:37:36,703 adding 'galaxy/model/unittest_utils/model_testing_utils.py' 2023-06-13T17:37:36,707 adding 'galaxy/model/unittest_utils/store_fixtures.py' 2023-06-13T17:37:36,710 adding 'galaxy/model/unittest_utils/tsi_model_fixtures.py' 2023-06-13T17:37:36,714 adding 'galaxy/model/view/__init__.py' 2023-06-13T17:37:36,717 adding 'galaxy/model/view/utils.py' 2023-06-13T17:37:36,722 adding 'galaxy/quota/__init__.py' 2023-06-13T17:37:36,725 adding 'galaxy/quota/_schema.py' 2023-06-13T17:37:36,730 adding 'galaxy/schema/__init__.py' 2023-06-13T17:37:36,733 adding 'galaxy/schema/fetch_data.py' 2023-06-13T17:37:36,736 adding 'galaxy/schema/fields.py' 2023-06-13T17:37:36,740 adding 'galaxy/schema/invocation.py' 2023-06-13T17:37:36,743 adding 'galaxy/schema/remote_files.py' 2023-06-13T17:37:36,769 adding 'galaxy/schema/schema.py' 2023-06-13T17:37:36,774 adding 'galaxy/schema/tasks.py' 2023-06-13T17:37:36,776 adding 'galaxy/schema/types.py' 2023-06-13T17:37:36,780 adding 'galaxy/schema/bco/__init__.py' 2023-06-13T17:37:36,784 adding 'galaxy/schema/bco/description_domain.py' 2023-06-13T17:37:36,786 adding 'galaxy/schema/bco/error_domain.py' 2023-06-13T17:37:36,789 adding 'galaxy/schema/bco/execution_domain.py' 2023-06-13T17:37:36,792 adding 'galaxy/schema/bco/io_domain.py' 2023-06-13T17:37:36,795 adding 'galaxy/schema/bco/parametric_domain.py' 2023-06-13T17:37:36,799 adding 'galaxy/schema/bco/provenance_domain.py' 2023-06-13T17:37:36,801 adding 'galaxy/schema/bco/usability_domain.py' 2023-06-13T17:37:36,804 adding 'galaxy/schema/bco/util.py' 2023-06-13T17:37:36,808 adding 'galaxy/schema/drs/AccessMethod.py' 2023-06-13T17:37:36,811 adding 'galaxy/schema/drs/AccessURL.py' 2023-06-13T17:37:36,814 adding 'galaxy/schema/drs/Checksum.py' 2023-06-13T17:37:36,816 adding 'galaxy/schema/drs/ContentsObject.py' 2023-06-13T17:37:36,820 adding 'galaxy/schema/drs/DrsObject.py' 2023-06-13T17:37:36,823 adding 'galaxy/schema/drs/DrsService.py' 2023-06-13T17:37:36,825 adding 'galaxy/schema/drs/Error.py' 2023-06-13T17:37:36,828 adding 'galaxy/schema/drs/Service.py' 2023-06-13T17:37:36,831 adding 'galaxy/schema/drs/__init__.py' 2023-06-13T17:37:36,835 adding 'galaxy/security/__init__.py' 2023-06-13T17:37:36,838 adding 'galaxy/security/idencoding.py' 2023-06-13T17:37:36,844 adding 'galaxy/security/object_wrapper.py' 2023-06-13T17:37:36,847 adding 'galaxy/security/passwords.py' 2023-06-13T17:37:36,849 adding 'galaxy/security/ssh_util.py' 2023-06-13T17:37:36,853 adding 'galaxy/security/validate_user_input.py' 2023-06-13T17:37:36,857 adding 'galaxy/security/vault.py' 2023-06-13T17:37:36,865 adding 'galaxy_data-23.0.2.dist-info/LICENSE' 2023-06-13T17:37:36,868 adding 'galaxy_data-23.0.2.dist-info/METADATA' 2023-06-13T17:37:36,870 adding 'galaxy_data-23.0.2.dist-info/WHEEL' 2023-06-13T17:37:36,872 adding 'galaxy_data-23.0.2.dist-info/entry_points.txt' 2023-06-13T17:37:36,874 adding 'galaxy_data-23.0.2.dist-info/top_level.txt' 2023-06-13T17:37:36,887 adding 'galaxy_data-23.0.2.dist-info/RECORD' 2023-06-13T17:37:36,923 removing build/bdist.linux-armv7l/wheel 2023-06-13T17:37:37,086 /tmp/pip-build-env-vwtudatq/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'galaxy.model.migrations.alembic.versions_tsi' is absent from the `packages` configuration. 2023-06-13T17:37:37,087 !! 2023-06-13T17:37:37,088 ******************************************************************************** 2023-06-13T17:37:37,088 ############################ 2023-06-13T17:37:37,089 # Package would be ignored # 2023-06-13T17:37:37,089 ############################ 2023-06-13T17:37:37,090 Python recognizes 'galaxy.model.migrations.alembic.versions_tsi' as an importable package[^1], 2023-06-13T17:37:37,090 but it is absent from setuptools' `packages` configuration. 2023-06-13T17:37:37,091 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-13T17:37:37,092 package, please make sure that 'galaxy.model.migrations.alembic.versions_tsi' is explicitly added 2023-06-13T17:37:37,092 to the `packages` configuration field. 2023-06-13T17:37:37,093 Alternatively, you can also rely on setuptools' discovery methods 2023-06-13T17:37:37,093 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-13T17:37:37,094 instead of `find_packages(...)`/`find:`). 2023-06-13T17:37:37,095 You can read more about "package discovery" on setuptools documentation page: 2023-06-13T17:37:37,096 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-13T17:37:37,096 If you don't want 'galaxy.model.migrations.alembic.versions_tsi' to be distributed and are 2023-06-13T17:37:37,097 already explicitly excluding 'galaxy.model.migrations.alembic.versions_tsi' via 2023-06-13T17:37:37,097 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-13T17:37:37,097 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-13T17:37:37,098 combination with a more fine grained `package-data` configuration. 2023-06-13T17:37:37,099 You can read more about "package data files" on setuptools documentation page: 2023-06-13T17:37:37,100 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-13T17:37:37,101 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-13T17:37:37,101 even if it does not contain any `.py` files. 2023-06-13T17:37:37,102 On the other hand, currently there is no concept of package data 2023-06-13T17:37:37,102 directory, all directories are treated like packages. 2023-06-13T17:37:37,103 ******************************************************************************** 2023-06-13T17:37:37,103 !! 2023-06-13T17:37:37,104 check.warn(importable) 2023-06-13T17:37:37,222 Building wheel for galaxy-data (pyproject.toml): finished with status 'done' 2023-06-13T17:37:37,274 Created wheel for galaxy-data: filename=galaxy_data-23.0.2-py3-none-any.whl size=682506 sha256=18a9d01cacbdcae2910e2f789500232af1ef28514b68aff9665647c9e3a4d88a 2023-06-13T17:37:37,276 Stored in directory: /tmp/pip-ephem-wheel-cache-7_xrmy5_/wheels/ec/39/23/0449523bcf4554d6a8a6665f4a607be74178a306c92ec63866 2023-06-13T17:37:37,333 Successfully built galaxy-data 2023-06-13T17:37:37,394 Removed build tracker: '/tmp/pip-build-tracker-mpgv93rc'