2023-06-13T20:58:14,163 Created temporary directory: /tmp/pip-build-tracker-yri3bxre 2023-06-13T20:58:14,164 Initialized build tracking at /tmp/pip-build-tracker-yri3bxre 2023-06-13T20:58:14,164 Created build tracker: /tmp/pip-build-tracker-yri3bxre 2023-06-13T20:58:14,164 Entered build tracker: /tmp/pip-build-tracker-yri3bxre 2023-06-13T20:58:14,165 Created temporary directory: /tmp/pip-wheel-n6_q7wi5 2023-06-13T20:58:14,168 Created temporary directory: /tmp/pip-ephem-wheel-cache-hej1hei3 2023-06-13T20:58:14,195 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-13T20:58:14,198 2 location(s) to search for versions of cpdb-protein: 2023-06-13T20:58:14,198 * https://pypi.org/simple/cpdb-protein/ 2023-06-13T20:58:14,198 * https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T20:58:14,199 Fetching project page and analyzing links: https://pypi.org/simple/cpdb-protein/ 2023-06-13T20:58:14,199 Getting page https://pypi.org/simple/cpdb-protein/ 2023-06-13T20:58:14,201 Found index url https://pypi.org/simple/ 2023-06-13T20:58:14,261 Fetched page https://pypi.org/simple/cpdb-protein/ as application/vnd.pypi.simple.v1+json 2023-06-13T20:58:14,262 Found link https://files.pythonhosted.org/packages/ed/58/a6f6d0924c7e4be968b8703eec99179403a13ce5e143660abef310a7717b/cpdb-protein-0.0.2.tar.gz (from https://pypi.org/simple/cpdb-protein/), version: 0.0.2 2023-06-13T20:58:14,263 Found link https://files.pythonhosted.org/packages/e6/25/653305959ded3d2da61b6c6d859fb1250c891728f1f821b329b4a808433c/cpdb-protein-0.1.0.tar.gz (from https://pypi.org/simple/cpdb-protein/), version: 0.1.0 2023-06-13T20:58:14,263 Fetching project page and analyzing links: https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T20:58:14,263 Getting page https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T20:58:14,264 Found index url https://www.piwheels.org/simple/ 2023-06-13T20:58:14,431 Fetched page https://www.piwheels.org/simple/cpdb-protein/ as text/html 2023-06-13T20:58:14,434 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=3687d224de19ddc0ac28fd68b69e64b178ac18fc406680daa254e74302d9d286 (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T20:58:14,434 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=3687d224de19ddc0ac28fd68b69e64b178ac18fc406680daa254e74302d9d286 (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T20:58:14,434 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=20b2a381b6c48b7d95899055fcaedad232305b5e3e72404912e427110ca2af51 (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T20:58:14,435 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=20b2a381b6c48b7d95899055fcaedad232305b5e3e72404912e427110ca2af51 (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T20:58:14,435 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=1bb3a8682dcca32281b7e6f610373ebf0e762ad6e260460f0c7036cfb7263c8a (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T20:58:14,435 Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=1bb3a8682dcca32281b7e6f610373ebf0e762ad6e260460f0c7036cfb7263c8a (from https://www.piwheels.org/simple/cpdb-protein/) 2023-06-13T20:58:14,435 Skipping link: not a file: https://www.piwheels.org/simple/cpdb-protein/ 2023-06-13T20:58:14,435 Skipping link: not a file: https://pypi.org/simple/cpdb-protein/ 2023-06-13T20:58:14,453 Given no hashes to check 1 links for project 'cpdb-protein': discarding no candidates 2023-06-13T20:58:14,470 Collecting cpdb-protein==0.1.0 2023-06-13T20:58:14,472 Created temporary directory: /tmp/pip-unpack-rqu4qmyw 2023-06-13T20:58:14,521 Downloading cpdb-protein-0.1.0.tar.gz (56 kB) 2023-06-13T20:58:14,584 Added cpdb-protein==0.1.0 from https://files.pythonhosted.org/packages/e6/25/653305959ded3d2da61b6c6d859fb1250c891728f1f821b329b4a808433c/cpdb-protein-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-yri3bxre' 2023-06-13T20:58:14,586 Running setup.py (path:/tmp/pip-wheel-n6_q7wi5/cpdb-protein_de79b5d2a636442b989b05718743c4fd/setup.py) egg_info for package cpdb-protein 2023-06-13T20:58:14,586 Created temporary directory: /tmp/pip-pip-egg-info-yac1s6vs 2023-06-13T20:58:14,587 Preparing metadata (setup.py): started 2023-06-13T20:58:14,588 Running command python setup.py egg_info 2023-06-13T20:58:16,422 running egg_info 2023-06-13T20:58:16,424 creating /tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info 2023-06-13T20:58:16,450 writing /tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/PKG-INFO 2023-06-13T20:58:16,452 writing dependency_links to /tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/dependency_links.txt 2023-06-13T20:58:16,454 writing requirements to /tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/requires.txt 2023-06-13T20:58:16,455 writing top-level names to /tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/top_level.txt 2023-06-13T20:58:16,457 writing manifest file '/tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T20:58:16,561 reading manifest file '/tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T20:58:16,563 reading manifest template 'MANIFEST.in' 2023-06-13T20:58:16,564 adding license file 'LICENSE' 2023-06-13T20:58:16,566 writing manifest file '/tmp/pip-pip-egg-info-yac1s6vs/cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T20:58:16,706 Preparing metadata (setup.py): finished with status 'done' 2023-06-13T20:58:16,711 Source in /tmp/pip-wheel-n6_q7wi5/cpdb-protein_de79b5d2a636442b989b05718743c4fd has version 0.1.0, which satisfies requirement cpdb-protein==0.1.0 from https://files.pythonhosted.org/packages/e6/25/653305959ded3d2da61b6c6d859fb1250c891728f1f821b329b4a808433c/cpdb-protein-0.1.0.tar.gz 2023-06-13T20:58:16,712 Removed cpdb-protein==0.1.0 from https://files.pythonhosted.org/packages/e6/25/653305959ded3d2da61b6c6d859fb1250c891728f1f821b329b4a808433c/cpdb-protein-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-yri3bxre' 2023-06-13T20:58:16,717 Created temporary directory: /tmp/pip-unpack-nljh3pwt 2023-06-13T20:58:16,717 Building wheels for collected packages: cpdb-protein 2023-06-13T20:58:16,722 Created temporary directory: /tmp/pip-wheel-1ri1atnk 2023-06-13T20:58:16,722 Building wheel for cpdb-protein (setup.py): started 2023-06-13T20:58:16,723 Destination directory: /tmp/pip-wheel-1ri1atnk 2023-06-13T20:58:16,723 Running command python setup.py bdist_wheel 2023-06-13T20:58:18,281 running bdist_wheel 2023-06-13T20:58:18,394 running build 2023-06-13T20:58:18,394 running build_py 2023-06-13T20:58:18,424 creating build 2023-06-13T20:58:18,425 creating build/lib.linux-armv7l-cpython-39 2023-06-13T20:58:18,426 creating build/lib.linux-armv7l-cpython-39/cpdb 2023-06-13T20:58:18,427 copying cpdb/__init__.py -> build/lib.linux-armv7l-cpython-39/cpdb 2023-06-13T20:58:18,429 running build_ext 2023-06-13T20:58:18,436 building 'cpdb.parser' extension 2023-06-13T20:58:18,437 creating build/temp.linux-armv7l-cpython-39 2023-06-13T20:58:18,437 creating build/temp.linux-armv7l-cpython-39/cpdb 2023-06-13T20:58:18,438 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c cpdb/parser.c -o build/temp.linux-armv7l-cpython-39/cpdb/parser.o 2023-06-13T20:58:18,835 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-06-13T20:58:18,835 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-06-13T20:58:18,835 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-06-13T20:58:18,836 from cpdb/parser.c:763: 2023-06-13T20:58:18,836 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-06-13T20:58:18,836 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-06-13T20:58:18,836 | ^~~~~~~ 2023-06-13T20:58:24,869 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/cpdb/parser.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/cpdb/parser.cpython-39-arm-linux-gnueabihf.so 2023-06-13T20:58:25,020 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-13T20:58:25,020 !! 2023-06-13T20:58:25,021 ******************************************************************************** 2023-06-13T20:58:25,021 Please avoid running ``setup.py`` directly. 2023-06-13T20:58:25,021 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-13T20:58:25,021 other standards-based tools. 2023-06-13T20:58:25,021 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-13T20:58:25,022 ******************************************************************************** 2023-06-13T20:58:25,022 !! 2023-06-13T20:58:25,022 self.initialize_options() 2023-06-13T20:58:25,048 installing to build/bdist.linux-armv7l/wheel 2023-06-13T20:58:25,048 running install 2023-06-13T20:58:25,073 running install_lib 2023-06-13T20:58:25,101 creating build/bdist.linux-armv7l 2023-06-13T20:58:25,102 creating build/bdist.linux-armv7l/wheel 2023-06-13T20:58:25,103 creating build/bdist.linux-armv7l/wheel/cpdb 2023-06-13T20:58:25,105 copying build/lib.linux-armv7l-cpython-39/cpdb/__init__.py -> build/bdist.linux-armv7l/wheel/cpdb 2023-06-13T20:58:25,107 copying build/lib.linux-armv7l-cpython-39/cpdb/parser.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cpdb 2023-06-13T20:58:25,113 running install_egg_info 2023-06-13T20:58:25,179 running egg_info 2023-06-13T20:58:25,205 writing cpdb_protein.egg-info/PKG-INFO 2023-06-13T20:58:25,206 writing dependency_links to cpdb_protein.egg-info/dependency_links.txt 2023-06-13T20:58:25,209 writing requirements to cpdb_protein.egg-info/requires.txt 2023-06-13T20:58:25,210 writing top-level names to cpdb_protein.egg-info/top_level.txt 2023-06-13T20:58:25,238 reading manifest file 'cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T20:58:25,241 reading manifest template 'MANIFEST.in' 2023-06-13T20:58:25,242 adding license file 'LICENSE' 2023-06-13T20:58:25,245 writing manifest file 'cpdb_protein.egg-info/SOURCES.txt' 2023-06-13T20:58:25,247 Copying cpdb_protein.egg-info to build/bdist.linux-armv7l/wheel/cpdb_protein-0.1.0-py3.9.egg-info 2023-06-13T20:58:25,257 running install_scripts 2023-06-13T20:58:25,304 creating build/bdist.linux-armv7l/wheel/cpdb_protein-0.1.0.dist-info/WHEEL 2023-06-13T20:58:25,307 creating '/tmp/pip-wheel-1ri1atnk/cpdb_protein-0.1.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-13T20:58:25,309 adding 'cpdb/__init__.py' 2023-06-13T20:58:25,375 adding 'cpdb/parser.cpython-39-arm-linux-gnueabihf.so' 2023-06-13T20:58:25,380 adding 'cpdb_protein-0.1.0.dist-info/LICENSE' 2023-06-13T20:58:25,381 adding 'cpdb_protein-0.1.0.dist-info/METADATA' 2023-06-13T20:58:25,382 adding 'cpdb_protein-0.1.0.dist-info/WHEEL' 2023-06-13T20:58:25,384 adding 'cpdb_protein-0.1.0.dist-info/top_level.txt' 2023-06-13T20:58:25,385 adding 'cpdb_protein-0.1.0.dist-info/RECORD' 2023-06-13T20:58:25,388 removing build/bdist.linux-armv7l/wheel 2023-06-13T20:58:25,552 Building wheel for cpdb-protein (setup.py): finished with status 'done' 2023-06-13T20:58:25,557 Created wheel for cpdb-protein: filename=cpdb_protein-0.1.0-cp39-cp39-linux_armv7l.whl size=123633 sha256=b63d4d4b0f6f896667bc095a4452c0f770b56197f24b95fbb4ee73d95b0429b2 2023-06-13T20:58:25,558 Stored in directory: /tmp/pip-ephem-wheel-cache-hej1hei3/wheels/a9/28/d6/dc23b4522593dd2b2163e9eeb4788b52d2d1051f173b1fa8f3 2023-06-13T20:58:25,569 Successfully built cpdb-protein 2023-06-13T20:58:25,575 Removed build tracker: '/tmp/pip-build-tracker-yri3bxre'