2023-06-14T16:05:15,992 Created temporary directory: /tmp/pip-build-tracker-wrl4tkdw 2023-06-14T16:05:15,995 Initialized build tracking at /tmp/pip-build-tracker-wrl4tkdw 2023-06-14T16:05:15,995 Created build tracker: /tmp/pip-build-tracker-wrl4tkdw 2023-06-14T16:05:15,996 Entered build tracker: /tmp/pip-build-tracker-wrl4tkdw 2023-06-14T16:05:15,997 Created temporary directory: /tmp/pip-wheel-4lekgptk 2023-06-14T16:05:16,005 Created temporary directory: /tmp/pip-ephem-wheel-cache-jxrqghvx 2023-06-14T16:05:16,057 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-14T16:05:16,066 2 location(s) to search for versions of codon-bias: 2023-06-14T16:05:16,066 * https://pypi.org/simple/codon-bias/ 2023-06-14T16:05:16,066 * https://www.piwheels.org/simple/codon-bias/ 2023-06-14T16:05:16,067 Fetching project page and analyzing links: https://pypi.org/simple/codon-bias/ 2023-06-14T16:05:16,068 Getting page https://pypi.org/simple/codon-bias/ 2023-06-14T16:05:16,072 Found index url https://pypi.org/simple/ 2023-06-14T16:05:16,263 Fetched page https://pypi.org/simple/codon-bias/ as application/vnd.pypi.simple.v1+json 2023-06-14T16:05:16,268 Found link https://files.pythonhosted.org/packages/17/35/c2e6fcb73d84d1f5035be8092cee3b2af06af723b84352638447529d227c/codon-bias-0.1.0.tar.gz (from https://pypi.org/simple/codon-bias/) (requires-python:>=3), version: 0.1.0 2023-06-14T16:05:16,269 Found link https://files.pythonhosted.org/packages/cc/4e/11bcc186f4618fba833af761d7d3e7598b3c57ee4d11f7c733790bb5db20/codon-bias-0.2.0.tar.gz (from https://pypi.org/simple/codon-bias/) (requires-python:>=3), version: 0.2.0 2023-06-14T16:05:16,271 Found link https://files.pythonhosted.org/packages/0f/54/80ba04878f8ca4da7f365e64dffc75c1f0e3271a382f4128a0f85f66ce09/codon-bias-0.3.0.tar.gz (from https://pypi.org/simple/codon-bias/) (requires-python:>=3), version: 0.3.0 2023-06-14T16:05:16,272 Found link https://files.pythonhosted.org/packages/03/9f/c0df251e0912595b2d5e55e61832c650c2453f95d1559cb864654e286126/codon-bias-0.3.1.tar.gz (from https://pypi.org/simple/codon-bias/) (requires-python:>=3), version: 0.3.1 2023-06-14T16:05:16,273 Fetching project page and analyzing links: https://www.piwheels.org/simple/codon-bias/ 2023-06-14T16:05:16,273 Getting page https://www.piwheels.org/simple/codon-bias/ 2023-06-14T16:05:16,276 Found index url https://www.piwheels.org/simple/ 2023-06-14T16:05:16,530 Fetched page https://www.piwheels.org/simple/codon-bias/ as text/html 2023-06-14T16:05:16,535 Skipping link: No binaries permitted for codon-bias: https://www.piwheels.org/simple/codon-bias/codon_bias-0.3.0-py3-none-any.whl#sha256=d3bc123aaf0d19c1e1e0e294b090f33fb6784cdc5e271759162ecd80d8545586 (from https://www.piwheels.org/simple/codon-bias/) (requires-python:>=3) 2023-06-14T16:05:16,535 Skipping link: No binaries permitted for codon-bias: https://www.piwheels.org/simple/codon-bias/codon_bias-0.2.0-py3-none-any.whl#sha256=54af1367ee5a968ac294644b098ab9e7b911598789435a083c12187ceeeb410e (from https://www.piwheels.org/simple/codon-bias/) (requires-python:>=3) 2023-06-14T16:05:16,536 Skipping link: No binaries permitted for codon-bias: https://www.piwheels.org/simple/codon-bias/codon_bias-0.1.0-py3-none-any.whl#sha256=45c2aa92ebf3bab8074d6a6e66799cacc106af5c5635b2eb1d6e2369f37a9ed8 (from https://www.piwheels.org/simple/codon-bias/) (requires-python:>=3) 2023-06-14T16:05:16,536 Skipping link: not a file: https://www.piwheels.org/simple/codon-bias/ 2023-06-14T16:05:16,537 Skipping link: not a file: https://pypi.org/simple/codon-bias/ 2023-06-14T16:05:16,570 Given no hashes to check 1 links for project 'codon-bias': discarding no candidates 2023-06-14T16:05:16,601 Collecting codon-bias==0.3.1 2023-06-14T16:05:16,605 Created temporary directory: /tmp/pip-unpack-359pnlo8 2023-06-14T16:05:16,810 Downloading codon-bias-0.3.1.tar.gz (102 kB) 2023-06-14T16:05:17,056 Added codon-bias==0.3.1 from https://files.pythonhosted.org/packages/03/9f/c0df251e0912595b2d5e55e61832c650c2453f95d1559cb864654e286126/codon-bias-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-wrl4tkdw' 2023-06-14T16:05:17,059 Running setup.py (path:/tmp/pip-wheel-4lekgptk/codon-bias_6dba7f80cb424ebb9f174db2cf15387c/setup.py) egg_info for package codon-bias 2023-06-14T16:05:17,060 Created temporary directory: /tmp/pip-pip-egg-info-pso8w2a4 2023-06-14T16:05:17,061 Preparing metadata (setup.py): started 2023-06-14T16:05:17,063 Running command python setup.py egg_info 2023-06-14T16:05:18,242 No `name` configuration, performing automatic discovery 2023-06-14T16:05:18,569 running egg_info 2023-06-14T16:05:18,572 creating /tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info 2023-06-14T16:05:18,636 writing /tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/PKG-INFO 2023-06-14T16:05:18,641 writing dependency_links to /tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/dependency_links.txt 2023-06-14T16:05:18,646 writing requirements to /tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/requires.txt 2023-06-14T16:05:18,648 writing top-level names to /tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/top_level.txt 2023-06-14T16:05:18,651 writing manifest file '/tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/SOURCES.txt' 2023-06-14T16:05:18,855 reading manifest file '/tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/SOURCES.txt' 2023-06-14T16:05:18,858 reading manifest template 'MANIFEST.in' 2023-06-14T16:05:18,861 adding license file 'LICENSE' 2023-06-14T16:05:18,867 writing manifest file '/tmp/pip-pip-egg-info-pso8w2a4/codon_bias.egg-info/SOURCES.txt' 2023-06-14T16:05:18,987 Preparing metadata (setup.py): finished with status 'done' 2023-06-14T16:05:19,001 Source in /tmp/pip-wheel-4lekgptk/codon-bias_6dba7f80cb424ebb9f174db2cf15387c has version 0.3.1, which satisfies requirement codon-bias==0.3.1 from https://files.pythonhosted.org/packages/03/9f/c0df251e0912595b2d5e55e61832c650c2453f95d1559cb864654e286126/codon-bias-0.3.1.tar.gz 2023-06-14T16:05:19,003 Removed codon-bias==0.3.1 from https://files.pythonhosted.org/packages/03/9f/c0df251e0912595b2d5e55e61832c650c2453f95d1559cb864654e286126/codon-bias-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-wrl4tkdw' 2023-06-14T16:05:19,019 Created temporary directory: /tmp/pip-unpack-k18rckiu 2023-06-14T16:05:19,020 Building wheels for collected packages: codon-bias 2023-06-14T16:05:19,029 Created temporary directory: /tmp/pip-wheel-opo7kgnp 2023-06-14T16:05:19,030 Building wheel for codon-bias (setup.py): started 2023-06-14T16:05:19,032 Destination directory: /tmp/pip-wheel-opo7kgnp 2023-06-14T16:05:19,032 Running command python setup.py bdist_wheel 2023-06-14T16:05:20,220 No `name` configuration, performing automatic discovery 2023-06-14T16:05:20,620 running bdist_wheel 2023-06-14T16:05:21,319 running build 2023-06-14T16:05:21,320 running build_py 2023-06-14T16:05:21,392 creating build 2023-06-14T16:05:21,393 creating build/lib 2023-06-14T16:05:21,394 creating build/lib/codonbias 2023-06-14T16:05:21,396 copying codonbias/__init__.py -> build/lib/codonbias 2023-06-14T16:05:21,400 copying codonbias/random.py -> build/lib/codonbias 2023-06-14T16:05:21,405 copying codonbias/utils.py -> build/lib/codonbias 2023-06-14T16:05:21,409 copying codonbias/pairwise.py -> build/lib/codonbias 2023-06-14T16:05:21,413 copying codonbias/optimizers.py -> build/lib/codonbias 2023-06-14T16:05:21,417 copying codonbias/stats.py -> build/lib/codonbias 2023-06-14T16:05:21,422 copying codonbias/scores.py -> build/lib/codonbias 2023-06-14T16:05:21,428 running egg_info 2023-06-14T16:05:21,576 writing codon_bias.egg-info/PKG-INFO 2023-06-14T16:05:21,580 writing dependency_links to codon_bias.egg-info/dependency_links.txt 2023-06-14T16:05:21,584 writing requirements to codon_bias.egg-info/requires.txt 2023-06-14T16:05:21,587 writing top-level names to codon_bias.egg-info/top_level.txt 2023-06-14T16:05:21,659 reading manifest file 'codon_bias.egg-info/SOURCES.txt' 2023-06-14T16:05:21,667 reading manifest template 'MANIFEST.in' 2023-06-14T16:05:21,669 adding license file 'LICENSE' 2023-06-14T16:05:21,677 writing manifest file 'codon_bias.egg-info/SOURCES.txt' 2023-06-14T16:05:21,683 copying codonbias/genetic_code_ncbi.csv -> build/lib/codonbias 2023-06-14T16:05:21,688 copying codonbias/tAI_svalues_Tuller.csv -> build/lib/codonbias 2023-06-14T16:05:21,692 copying codonbias/tAI_svalues_dosReis.csv -> build/lib/codonbias 2023-06-14T16:05:21,769 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-14T16:05:21,770 !! 2023-06-14T16:05:21,771 ******************************************************************************** 2023-06-14T16:05:21,771 Please avoid running ``setup.py`` directly. 2023-06-14T16:05:21,771 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-14T16:05:21,772 other standards-based tools. 2023-06-14T16:05:21,772 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-14T16:05:21,773 ******************************************************************************** 2023-06-14T16:05:21,774 !! 2023-06-14T16:05:21,774 self.initialize_options() 2023-06-14T16:05:21,837 installing to build/bdist.linux-armv7l/wheel 2023-06-14T16:05:21,838 running install 2023-06-14T16:05:21,897 running install_lib 2023-06-14T16:05:21,965 creating build/bdist.linux-armv7l 2023-06-14T16:05:21,966 creating build/bdist.linux-armv7l/wheel 2023-06-14T16:05:21,970 creating build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,972 copying build/lib/codonbias/__init__.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,976 copying build/lib/codonbias/random.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,982 copying build/lib/codonbias/tAI_svalues_dosReis.csv -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,985 copying build/lib/codonbias/utils.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,990 copying build/lib/codonbias/pairwise.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,994 copying build/lib/codonbias/optimizers.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:21,998 copying build/lib/codonbias/stats.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:22,004 copying build/lib/codonbias/genetic_code_ncbi.csv -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:22,008 copying build/lib/codonbias/tAI_svalues_Tuller.csv -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:22,012 copying build/lib/codonbias/scores.py -> build/bdist.linux-armv7l/wheel/codonbias 2023-06-14T16:05:22,018 running install_egg_info 2023-06-14T16:05:22,094 Copying codon_bias.egg-info to build/bdist.linux-armv7l/wheel/codon_bias-0.3.1-py3.7.egg-info 2023-06-14T16:05:22,114 running install_scripts 2023-06-14T16:05:22,143 creating build/bdist.linux-armv7l/wheel/codon_bias-0.3.1.dist-info/WHEEL 2023-06-14T16:05:22,148 creating '/tmp/pip-wheel-opo7kgnp/codon_bias-0.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-14T16:05:22,156 adding 'codonbias/__init__.py' 2023-06-14T16:05:22,159 adding 'codonbias/genetic_code_ncbi.csv' 2023-06-14T16:05:22,162 adding 'codonbias/optimizers.py' 2023-06-14T16:05:22,166 adding 'codonbias/pairwise.py' 2023-06-14T16:05:22,172 adding 'codonbias/random.py' 2023-06-14T16:05:22,183 adding 'codonbias/scores.py' 2023-06-14T16:05:22,188 adding 'codonbias/stats.py' 2023-06-14T16:05:22,190 adding 'codonbias/tAI_svalues_Tuller.csv' 2023-06-14T16:05:22,193 adding 'codonbias/tAI_svalues_dosReis.csv' 2023-06-14T16:05:22,196 adding 'codonbias/utils.py' 2023-06-14T16:05:22,199 adding 'codon_bias-0.3.1.dist-info/LICENSE' 2023-06-14T16:05:22,201 adding 'codon_bias-0.3.1.dist-info/METADATA' 2023-06-14T16:05:22,203 adding 'codon_bias-0.3.1.dist-info/WHEEL' 2023-06-14T16:05:22,205 adding 'codon_bias-0.3.1.dist-info/top_level.txt' 2023-06-14T16:05:22,207 adding 'codon_bias-0.3.1.dist-info/RECORD' 2023-06-14T16:05:22,211 removing build/bdist.linux-armv7l/wheel 2023-06-14T16:05:22,373 Building wheel for codon-bias (setup.py): finished with status 'done' 2023-06-14T16:05:22,382 Created wheel for codon-bias: filename=codon_bias-0.3.1-py3-none-any.whl size=26727 sha256=26224a3549ff4812bed0265b7c0f62591b26ef8ff8ebfe7143916ff6f5ecea4c 2023-06-14T16:05:22,384 Stored in directory: /tmp/pip-ephem-wheel-cache-jxrqghvx/wheels/2a/b1/49/f442d3d5910a77841bfa0745f0c7212d43116aa71b83f17240 2023-06-14T16:05:22,411 Successfully built codon-bias 2023-06-14T16:05:22,420 Removed build tracker: '/tmp/pip-build-tracker-wrl4tkdw'