2023-06-19T14:43:08,401 Created temporary directory: /tmp/pip-build-tracker-q8efa30s
2023-06-19T14:43:08,403 Initialized build tracking at /tmp/pip-build-tracker-q8efa30s
2023-06-19T14:43:08,403 Created build tracker: /tmp/pip-build-tracker-q8efa30s
2023-06-19T14:43:08,403 Entered build tracker: /tmp/pip-build-tracker-q8efa30s
2023-06-19T14:43:08,404 Created temporary directory: /tmp/pip-wheel-9nnv6cvg
2023-06-19T14:43:08,407 Created temporary directory: /tmp/pip-ephem-wheel-cache-6kbh95h_
2023-06-19T14:43:08,433 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-19T14:43:08,437 2 location(s) to search for versions of pmx-biobb:
2023-06-19T14:43:08,437 * https://pypi.org/simple/pmx-biobb/
2023-06-19T14:43:08,437 * https://www.piwheels.org/simple/pmx-biobb/
2023-06-19T14:43:08,438 Fetching project page and analyzing links: https://pypi.org/simple/pmx-biobb/
2023-06-19T14:43:08,438 Getting page https://pypi.org/simple/pmx-biobb/
2023-06-19T14:43:08,440 Found index url https://pypi.org/simple/
2023-06-19T14:43:08,499 Fetched page https://pypi.org/simple/pmx-biobb/ as application/vnd.pypi.simple.v1+json
2023-06-19T14:43:08,503   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/ea/0e/652070bd7d0ca56047ee9da48bdce6ad248973b822b5fe7d931c07a93625/pmx_biobb-1.0.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,504   Link requires a different Python (3.9.2 not in: '==3.7.*'): https://files.pythonhosted.org/packages/c3/e5/f2e9751452ed944cd072d3cde0ec9523f4b3bfbde758a1b325d3d0ee42cf/pmx_biobb-1.0.0.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,504   Skipping link: 1.0.0 Requires-Python ==3.7.*: https://files.pythonhosted.org/packages/c3/e5/f2e9751452ed944cd072d3cde0ec9523f4b3bfbde758a1b325d3d0ee42cf/pmx_biobb-1.0.0.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,504   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/88/5b/2f2f6e34ed256b51485f1313f89aeb9647a2df056fad635dc6c69354a142/pmx_biobb-1.0.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,505   Link requires a different Python (3.9.2 not in: '==3.7.*'): https://files.pythonhosted.org/packages/44/5e/69dc9d443dcb657ec4849d483f4e759b6e40192def9d15d46fb85f2e8ba2/pmx_biobb-1.0.1.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,505   Skipping link: 1.0.1 Requires-Python ==3.7.*: https://files.pythonhosted.org/packages/44/5e/69dc9d443dcb657ec4849d483f4e759b6e40192def9d15d46fb85f2e8ba2/pmx_biobb-1.0.1.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,505   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/dc/26/88efc470b39ed04650850696ca8d4c1777e1f1788960a41b063c4f9f64cc/pmx_biobb-2.0.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,506   Found link https://files.pythonhosted.org/packages/32/7c/dd656cd2d785a7b9815e0ca54fb9bec35c258cdc058d9450726e65bc201c/pmx_biobb-2.0.0.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7), version: 2.0.0
2023-06-19T14:43:08,506   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/73/a2/51564515b8b81b725a8aa81b962e040e66d59ce4637be894cf02315fc403/pmx_biobb-3.0.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,507   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/e7/93/4fac73a6fe156e0940953662d457f0424e847a9546db1c10a7bbad5d3642/pmx_biobb-3.0.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,507   Found link https://files.pythonhosted.org/packages/3c/b8/7dcc8b482f02b8ff26aa1a9819fd389f9cc01087954d968e156a073ea4ac/pmx_biobb-3.0.1.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7), version: 3.0.1
2023-06-19T14:43:08,507   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/c4/2a/c00053a2535945c6900b99621be5c40437e939c64f36ea7d14e3bb5febbe/pmx_biobb-3.0.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,508   Found link https://files.pythonhosted.org/packages/8a/0b/e7b469ecf2b337e713cafe136f826f79709c9940a4d3a1eb00a669657af0/pmx_biobb-3.0.2.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7), version: 3.0.2
2023-06-19T14:43:08,508   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/8a/70/3744fd3fd4d13d0fcd04c50740aa9584ba6c5b7eb43e1a4dd65a7c223cf2/pmx_biobb-3.0.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,509   Found link https://files.pythonhosted.org/packages/6f/b2/61607c93aa5d3c34838e44ed7df748137d3b266a06a32b6d521a19ddedb4/pmx_biobb-3.0.3.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7), version: 3.0.3
2023-06-19T14:43:08,509   Skipping link: No binaries permitted for pmx-biobb: https://files.pythonhosted.org/packages/34/3e/e0a91c21ec82ca2108ec1f20c6f9fb0feb3e83b1d9277b2b521b43e77067/pmx_biobb-4.0.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,509   Found link https://files.pythonhosted.org/packages/d3/ee/61a98e8a9a4a1d5ab8ea32a2712cc1dfb3d7326a8404fcbd3347b28fab4d/pmx_biobb-4.0.0.tar.gz (from https://pypi.org/simple/pmx-biobb/) (requires-python:>=3.7), version: 4.0.0
2023-06-19T14:43:08,510 Fetching project page and analyzing links: https://www.piwheels.org/simple/pmx-biobb/
2023-06-19T14:43:08,510 Getting page https://www.piwheels.org/simple/pmx-biobb/
2023-06-19T14:43:08,511 Found index url https://www.piwheels.org/simple/
2023-06-19T14:43:08,667 Fetched page https://www.piwheels.org/simple/pmx-biobb/ as text/html
2023-06-19T14:43:08,674   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-4.0.0-cp37-cp37m-linux_armv7l.whl#sha256=a27ba6f102f456ee697a94e3336dc27b59746723f1054ffdd4229bc85b007dd1 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,674   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-4.0.0-cp37-cp37m-linux_armv6l.whl#sha256=a27ba6f102f456ee697a94e3336dc27b59746723f1054ffdd4229bc85b007dd1 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,675   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.3-cp39-cp39-linux_armv7l.whl#sha256=40a70608dd4bf4f418963f9f6cea5d67ebf81a1a19341a6326b8df270f390f13 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,675   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.3-cp39-cp39-linux_armv6l.whl#sha256=40a70608dd4bf4f418963f9f6cea5d67ebf81a1a19341a6326b8df270f390f13 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,675   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.3-cp37-cp37m-linux_armv7l.whl#sha256=fc8fbd57b0cb8610bb25bffb894b86ccd8e7585d21e9449ddd6574a630f9b239 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,675   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.3-cp37-cp37m-linux_armv6l.whl#sha256=fc8fbd57b0cb8610bb25bffb894b86ccd8e7585d21e9449ddd6574a630f9b239 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,675   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.2-cp39-cp39-linux_armv7l.whl#sha256=74fd458e035071ba11d9e1399e02fc5bb4eb6423558ebf830a74400b03b09d21 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,676   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.2-cp39-cp39-linux_armv6l.whl#sha256=74fd458e035071ba11d9e1399e02fc5bb4eb6423558ebf830a74400b03b09d21 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,676   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.2-cp37-cp37m-linux_armv7l.whl#sha256=d9a0e387d6642853c6a15e0775ee01c0d16b83bc10043722ce37d48e97775ea0 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,676   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.2-cp37-cp37m-linux_armv6l.whl#sha256=d9a0e387d6642853c6a15e0775ee01c0d16b83bc10043722ce37d48e97775ea0 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,676   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.1-cp39-cp39-linux_armv7l.whl#sha256=ee00c4200b2d58c9f38a7fd4e90bf138cd1a944485cce1bdbcb00cff45c8a842 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,676   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.1-cp39-cp39-linux_armv6l.whl#sha256=ee00c4200b2d58c9f38a7fd4e90bf138cd1a944485cce1bdbcb00cff45c8a842 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,677   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.1-cp37-cp37m-linux_armv7l.whl#sha256=07b4c88db1007c2b4048164c399202c430d8a7a8cc06ba72b508c989771d479d (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,677   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-3.0.1-cp37-cp37m-linux_armv6l.whl#sha256=07b4c88db1007c2b4048164c399202c430d8a7a8cc06ba72b508c989771d479d (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,677   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-2.0.0-cp39-cp39-linux_armv7l.whl#sha256=49cc38d8b7531ef391784e7e40fe37f1e923ef8df1e325feb77291ce2ebbf2f9 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,677   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-2.0.0-cp39-cp39-linux_armv6l.whl#sha256=49cc38d8b7531ef391784e7e40fe37f1e923ef8df1e325feb77291ce2ebbf2f9 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,677   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-2.0.0-cp37-cp37m-linux_armv7l.whl#sha256=7ed553f6de880f8fb39de2e8b4d6ea35ed8208bf52b08e62d1bcabe12bce2581 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,678   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-2.0.0-cp37-cp37m-linux_armv6l.whl#sha256=7ed553f6de880f8fb39de2e8b4d6ea35ed8208bf52b08e62d1bcabe12bce2581 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:>=3.7)
2023-06-19T14:43:08,678   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=06669bc75e212029d4eb66faec74a5eea1198968e9440e0b77c050a0ae585625 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,678   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=06669bc75e212029d4eb66faec74a5eea1198968e9440e0b77c050a0ae585625 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,678   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=6658576cd352d7f064666a210bfcbbf197410e312cbbdba101d4f6e4f6e9f868 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,678   Skipping link: No binaries permitted for pmx-biobb: https://www.piwheels.org/simple/pmx-biobb/pmx_biobb-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=6658576cd352d7f064666a210bfcbbf197410e312cbbdba101d4f6e4f6e9f868 (from https://www.piwheels.org/simple/pmx-biobb/) (requires-python:==3.7.*)
2023-06-19T14:43:08,679 Skipping link: not a file: https://www.piwheels.org/simple/pmx-biobb/
2023-06-19T14:43:08,679 Skipping link: not a file: https://pypi.org/simple/pmx-biobb/
2023-06-19T14:43:08,697 Given no hashes to check 1 links for project 'pmx-biobb': discarding no candidates
2023-06-19T14:43:08,714 Collecting pmx-biobb==4.0.0
2023-06-19T14:43:08,716   Created temporary directory: /tmp/pip-unpack-r0d4jg4k
2023-06-19T14:43:08,767   Downloading pmx_biobb-4.0.0.tar.gz (3.8 MB)
2023-06-19T14:43:10,427   Added pmx-biobb==4.0.0 from https://files.pythonhosted.org/packages/d3/ee/61a98e8a9a4a1d5ab8ea32a2712cc1dfb3d7326a8404fcbd3347b28fab4d/pmx_biobb-4.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-q8efa30s'
2023-06-19T14:43:10,429   Running setup.py (path:/tmp/pip-wheel-9nnv6cvg/pmx-biobb_099b733bf428465e876950189af62455/setup.py) egg_info for package pmx-biobb
2023-06-19T14:43:10,430   Created temporary directory: /tmp/pip-pip-egg-info-us16freg
2023-06-19T14:43:10,431   Preparing metadata (setup.py): started
2023-06-19T14:43:10,432   Running command python setup.py egg_info
2023-06-19T14:43:11,163   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2023-06-19T14:43:11,164   !!

2023-06-19T14:43:11,164           ********************************************************************************
2023-06-19T14:43:11,164           Requirements should be satisfied by a PEP 517 installer.
2023-06-19T14:43:11,165           If you are using pip, you can try `pip install --use-pep517`.
2023-06-19T14:43:11,165           ********************************************************************************

2023-06-19T14:43:11,165   !!
2023-06-19T14:43:11,165     dist.fetch_build_eggs(dist.setup_requires)
2023-06-19T14:43:14,666   running egg_info
2023-06-19T14:43:14,668   creating /tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info
2023-06-19T14:43:14,695   writing /tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/PKG-INFO
2023-06-19T14:43:14,698   writing dependency_links to /tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/dependency_links.txt
2023-06-19T14:43:14,700   writing entry points to /tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/entry_points.txt
2023-06-19T14:43:14,701   writing requirements to /tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/requires.txt
2023-06-19T14:43:14,702   writing top-level names to /tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/top_level.txt
2023-06-19T14:43:14,703   writing manifest file '/tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/SOURCES.txt'
2023-06-19T14:43:14,984   reading manifest file '/tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/SOURCES.txt'
2023-06-19T14:43:14,986   reading manifest template 'MANIFEST.in'
2023-06-19T14:43:15,004   adding license file 'LICENSE'
2023-06-19T14:43:15,014   writing manifest file '/tmp/pip-pip-egg-info-us16freg/pmx_biobb.egg-info/SOURCES.txt'
2023-06-19T14:43:15,099   Preparing metadata (setup.py): finished with status 'done'
2023-06-19T14:43:15,104   Source in /tmp/pip-wheel-9nnv6cvg/pmx-biobb_099b733bf428465e876950189af62455 has version 4.0.0, which satisfies requirement pmx-biobb==4.0.0 from https://files.pythonhosted.org/packages/d3/ee/61a98e8a9a4a1d5ab8ea32a2712cc1dfb3d7326a8404fcbd3347b28fab4d/pmx_biobb-4.0.0.tar.gz
2023-06-19T14:43:15,105   Removed pmx-biobb==4.0.0 from https://files.pythonhosted.org/packages/d3/ee/61a98e8a9a4a1d5ab8ea32a2712cc1dfb3d7326a8404fcbd3347b28fab4d/pmx_biobb-4.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-q8efa30s'
2023-06-19T14:43:15,112 Created temporary directory: /tmp/pip-unpack-fnyj600i
2023-06-19T14:43:15,112 Building wheels for collected packages: pmx-biobb
2023-06-19T14:43:15,116   Created temporary directory: /tmp/pip-wheel-983rc3e7
2023-06-19T14:43:15,116   Building wheel for pmx-biobb (setup.py): started
2023-06-19T14:43:15,117   Destination directory: /tmp/pip-wheel-983rc3e7
2023-06-19T14:43:15,117   Running command python setup.py bdist_wheel
2023-06-19T14:43:15,801   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2023-06-19T14:43:15,802   !!

2023-06-19T14:43:15,802           ********************************************************************************
2023-06-19T14:43:15,802           Requirements should be satisfied by a PEP 517 installer.
2023-06-19T14:43:15,803           If you are using pip, you can try `pip install --use-pep517`.
2023-06-19T14:43:15,803           ********************************************************************************

2023-06-19T14:43:15,803   !!
2023-06-19T14:43:15,803     dist.fetch_build_eggs(dist.setup_requires)
2023-06-19T14:43:16,064   running bdist_wheel
2023-06-19T14:43:16,369   running build
2023-06-19T14:43:16,369   running build_py
2023-06-19T14:43:16,372   creating build
2023-06-19T14:43:16,372   creating build/lib.linux-armv7l-cpython-39
2023-06-19T14:43:16,373   creating build/lib.linux-armv7l-cpython-39/pmx
2023-06-19T14:43:16,374   copying src/pmx/_version.py -> build/lib.linux-armv7l-cpython-39/pmx
2023-06-19T14:43:16,376   running egg_info
2023-06-19T14:43:16,429   writing src/pmx_biobb.egg-info/PKG-INFO
2023-06-19T14:43:16,431   writing dependency_links to src/pmx_biobb.egg-info/dependency_links.txt
2023-06-19T14:43:16,433   writing entry points to src/pmx_biobb.egg-info/entry_points.txt
2023-06-19T14:43:16,434   writing requirements to src/pmx_biobb.egg-info/requires.txt
2023-06-19T14:43:16,435   writing top-level names to src/pmx_biobb.egg-info/top_level.txt
2023-06-19T14:43:16,465   reading manifest file 'src/pmx_biobb.egg-info/SOURCES.txt'
2023-06-19T14:43:16,472   reading manifest template 'MANIFEST.in'
2023-06-19T14:43:16,485   adding license file 'LICENSE'
2023-06-19T14:43:16,499   writing manifest file 'src/pmx_biobb.egg-info/SOURCES.txt'
2023-06-19T14:43:16,501   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.data' is absent from the `packages` configuration.
2023-06-19T14:43:16,501   !!

2023-06-19T14:43:16,502           ********************************************************************************
2023-06-19T14:43:16,502           ############################
2023-06-19T14:43:16,502           # Package would be ignored #
2023-06-19T14:43:16,502           ############################
2023-06-19T14:43:16,502           Python recognizes 'pmx.data' as an importable package[^1],
2023-06-19T14:43:16,502           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,502           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,503           package, please make sure that 'pmx.data' is explicitly added
2023-06-19T14:43:16,503           to the `packages` configuration field.

2023-06-19T14:43:16,503           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,503           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,503           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,503           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,504           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,504           If you don't want 'pmx.data' to be distributed and are
2023-06-19T14:43:16,504           already explicitly excluding 'pmx.data' via
2023-06-19T14:43:16,504           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,504           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,504           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,505           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,505           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,505           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,505                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,505                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,505                 directory, all directories are treated like packages.
2023-06-19T14:43:16,506           ********************************************************************************

2023-06-19T14:43:16,506   !!
2023-06-19T14:43:16,506     check.warn(importable)
2023-06-19T14:43:16,506   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.data.mutff45' is absent from the `packages` configuration.
2023-06-19T14:43:16,506   !!

2023-06-19T14:43:16,506           ********************************************************************************
2023-06-19T14:43:16,507           ############################
2023-06-19T14:43:16,507           # Package would be ignored #
2023-06-19T14:43:16,507           ############################
2023-06-19T14:43:16,507           Python recognizes 'pmx.data.mutff45' as an importable package[^1],
2023-06-19T14:43:16,507           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,507           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,507           package, please make sure that 'pmx.data.mutff45' is explicitly added
2023-06-19T14:43:16,507           to the `packages` configuration field.

2023-06-19T14:43:16,508           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,508           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,508           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,508           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,508           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,509           If you don't want 'pmx.data.mutff45' to be distributed and are
2023-06-19T14:43:16,509           already explicitly excluding 'pmx.data.mutff45' via
2023-06-19T14:43:16,509           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,509           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,509           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,509           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,509           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,510           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,510                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,510                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,510                 directory, all directories are treated like packages.
2023-06-19T14:43:16,510           ********************************************************************************

2023-06-19T14:43:16,510   !!
2023-06-19T14:43:16,511     check.warn(importable)
2023-06-19T14:43:16,511   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.data.mutff45dna' is absent from the `packages` configuration.
2023-06-19T14:43:16,511   !!

2023-06-19T14:43:16,511           ********************************************************************************
2023-06-19T14:43:16,511           ############################
2023-06-19T14:43:16,511           # Package would be ignored #
2023-06-19T14:43:16,511           ############################
2023-06-19T14:43:16,512           Python recognizes 'pmx.data.mutff45dna' as an importable package[^1],
2023-06-19T14:43:16,512           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,512           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,512           package, please make sure that 'pmx.data.mutff45dna' is explicitly added
2023-06-19T14:43:16,512           to the `packages` configuration field.

2023-06-19T14:43:16,512           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,512           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,512           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,513           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,513           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,513           If you don't want 'pmx.data.mutff45dna' to be distributed and are
2023-06-19T14:43:16,513           already explicitly excluding 'pmx.data.mutff45dna' via
2023-06-19T14:43:16,513           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,513           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,514           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,514           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,514           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,514           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,515                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,515                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,515                 directory, all directories are treated like packages.
2023-06-19T14:43:16,515           ********************************************************************************

2023-06-19T14:43:16,515   !!
2023-06-19T14:43:16,515     check.warn(importable)
2023-06-19T14:43:16,519   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.extensions.pmx' is absent from the `packages` configuration.
2023-06-19T14:43:16,520   !!

2023-06-19T14:43:16,520           ********************************************************************************
2023-06-19T14:43:16,520           ############################
2023-06-19T14:43:16,520           # Package would be ignored #
2023-06-19T14:43:16,520           ############################
2023-06-19T14:43:16,520           Python recognizes 'pmx.extensions.pmx' as an importable package[^1],
2023-06-19T14:43:16,520           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,521           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,521           package, please make sure that 'pmx.extensions.pmx' is explicitly added
2023-06-19T14:43:16,521           to the `packages` configuration field.

2023-06-19T14:43:16,521           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,521           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,521           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,521           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,522           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,522           If you don't want 'pmx.extensions.pmx' to be distributed and are
2023-06-19T14:43:16,522           already explicitly excluding 'pmx.extensions.pmx' via
2023-06-19T14:43:16,522           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,522           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,522           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,523           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,523           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,523           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,523                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,523                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,523                 directory, all directories are treated like packages.
2023-06-19T14:43:16,524           ********************************************************************************

2023-06-19T14:43:16,524   !!
2023-06-19T14:43:16,524     check.warn(importable)
2023-06-19T14:43:16,524   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.extensions.xdr' is absent from the `packages` configuration.
2023-06-19T14:43:16,524   !!

2023-06-19T14:43:16,525           ********************************************************************************
2023-06-19T14:43:16,525           ############################
2023-06-19T14:43:16,525           # Package would be ignored #
2023-06-19T14:43:16,525           ############################
2023-06-19T14:43:16,525           Python recognizes 'pmx.extensions.xdr' as an importable package[^1],
2023-06-19T14:43:16,525           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,525           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,526           package, please make sure that 'pmx.extensions.xdr' is explicitly added
2023-06-19T14:43:16,526           to the `packages` configuration field.

2023-06-19T14:43:16,526           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,526           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,526           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,526           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,527           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,527           If you don't want 'pmx.extensions.xdr' to be distributed and are
2023-06-19T14:43:16,527           already explicitly excluding 'pmx.extensions.xdr' via
2023-06-19T14:43:16,527           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,527           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,527           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,527           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,528           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,528           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,528                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,528                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,528                 directory, all directories are treated like packages.
2023-06-19T14:43:16,528           ********************************************************************************

2023-06-19T14:43:16,529   !!
2023-06-19T14:43:16,529     check.warn(importable)
2023-06-19T14:43:16,529   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.scripts' is absent from the `packages` configuration.
2023-06-19T14:43:16,529   !!

2023-06-19T14:43:16,529           ********************************************************************************
2023-06-19T14:43:16,529           ############################
2023-06-19T14:43:16,529           # Package would be ignored #
2023-06-19T14:43:16,530           ############################
2023-06-19T14:43:16,530           Python recognizes 'pmx.scripts' as an importable package[^1],
2023-06-19T14:43:16,530           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,530           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,530           package, please make sure that 'pmx.scripts' is explicitly added
2023-06-19T14:43:16,530           to the `packages` configuration field.

2023-06-19T14:43:16,530           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,530           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,531           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,531           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,531           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,531           If you don't want 'pmx.scripts' to be distributed and are
2023-06-19T14:43:16,531           already explicitly excluding 'pmx.scripts' via
2023-06-19T14:43:16,531           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,532           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,532           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,532           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,532           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,532           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,533                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,533                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,533                 directory, all directories are treated like packages.
2023-06-19T14:43:16,533           ********************************************************************************

2023-06-19T14:43:16,533   !!
2023-06-19T14:43:16,533     check.warn(importable)
2023-06-19T14:43:16,533   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pmx.scripts.ligands' is absent from the `packages` configuration.
2023-06-19T14:43:16,533   !!

2023-06-19T14:43:16,534           ********************************************************************************
2023-06-19T14:43:16,534           ############################
2023-06-19T14:43:16,534           # Package would be ignored #
2023-06-19T14:43:16,534           ############################
2023-06-19T14:43:16,534           Python recognizes 'pmx.scripts.ligands' as an importable package[^1],
2023-06-19T14:43:16,534           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:43:16,534           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:43:16,535           package, please make sure that 'pmx.scripts.ligands' is explicitly added
2023-06-19T14:43:16,535           to the `packages` configuration field.

2023-06-19T14:43:16,535           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:43:16,535           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:43:16,535           instead of `find_packages(...)`/`find:`).

2023-06-19T14:43:16,535           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:43:16,536           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:43:16,536           If you don't want 'pmx.scripts.ligands' to be distributed and are
2023-06-19T14:43:16,536           already explicitly excluding 'pmx.scripts.ligands' via
2023-06-19T14:43:16,536           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:43:16,536           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:43:16,536           combination with a more fine grained `package-data` configuration.

2023-06-19T14:43:16,536           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:43:16,537           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:43:16,537           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:43:16,537                 even if it does not contain any `.py` files.
2023-06-19T14:43:16,537                 On the other hand, currently there is no concept of package data
2023-06-19T14:43:16,537                 directory, all directories are treated like packages.
2023-06-19T14:43:16,537           ********************************************************************************

2023-06-19T14:43:16,538   !!
2023-06-19T14:43:16,538     check.warn(importable)
2023-06-19T14:43:16,538   creating build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,539   copying src/pmx/data/bbdep.pkl -> build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,784   copying src/pmx/data/blosum62_new.mat -> build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,786   copying src/pmx/data/bp.pkl -> build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,791   copying src/pmx/data/bp_amber.pkl -> build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,796   copying src/pmx/data/bp_charmm.pkl -> build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,800   copying src/pmx/data/rna.pkl -> build/lib.linux-armv7l-cpython-39/pmx/data
2023-06-19T14:43:16,804   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45
2023-06-19T14:43:16,805   copying src/pmx/data/mutff45/atommass.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45
2023-06-19T14:43:16,807   copying src/pmx/data/mutff45/elements.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45
2023-06-19T14:43:16,809   copying src/pmx/data/mutff45/spc216.gro -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45
2023-06-19T14:43:16,812   copying src/pmx/data/mutff45/specbond.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45
2023-06-19T14:43:16,814   copying src/pmx/data/mutff45/xlateat.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45
2023-06-19T14:43:16,817   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,818   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,820   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,823   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,825   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,827   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.vsd -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,830   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/backup_mutres -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,852   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,854   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,856   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,858   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,860   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/ffbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,863   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/forcefield.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,865   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/gbsa.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,867   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/ions.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,869   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/mutres.mtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,912   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/mutres.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,934   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,936   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,938   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,940   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,944   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/spc.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,946   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/spce.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,948   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip3p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,950   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip4p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,951   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip4pew.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,953   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip5p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,955   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/urea.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,957   copying src/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/watermodels.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:16,959   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,960   copying src/pmx/data/mutff45/amber99sbmut.ff/Makefile.am -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,962   copying src/pmx/data/mutff45/amber99sbmut.ff/Makefile.in -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,964   copying src/pmx/data/mutff45/amber99sbmut.ff/aminoacids.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,967   copying src/pmx/data/mutff45/amber99sbmut.ff/aminoacids.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,969   copying src/pmx/data/mutff45/amber99sbmut.ff/aminoacids.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,971   copying src/pmx/data/mutff45/amber99sbmut.ff/aminoacids.vsd -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,973   copying src/pmx/data/mutff45/amber99sbmut.ff/dna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,975   copying src/pmx/data/mutff45/amber99sbmut.ff/dna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,977   copying src/pmx/data/mutff45/amber99sbmut.ff/dna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,979   copying src/pmx/data/mutff45/amber99sbmut.ff/dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,982   copying src/pmx/data/mutff45/amber99sbmut.ff/gbsa.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,984   copying src/pmx/data/mutff45/amber99sbmut.ff/rna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,986   copying src/pmx/data/mutff45/amber99sbmut.ff/rna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,988   copying src/pmx/data/mutff45/amber99sbmut.ff/rna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,990   copying src/pmx/data/mutff45/amber99sbmut.ff/rna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,993   copying src/pmx/data/mutff45/amber99sbmut.ff/spc.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,995   copying src/pmx/data/mutff45/amber99sbmut.ff/spce.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,997   copying src/pmx/data/mutff45/amber99sbmut.ff/tip3p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:16,999   copying src/pmx/data/mutff45/amber99sbmut.ff/tip4p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:17,001   copying src/pmx/data/mutff45/amber99sbmut.ff/tip4pew.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:17,003   copying src/pmx/data/mutff45/amber99sbmut.ff/tip5p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:17,005   copying src/pmx/data/mutff45/amber99sbmut.ff/urea.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:17,007   copying src/pmx/data/mutff45/amber99sbmut.ff/watermodels.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:17,009   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,010   copying src/pmx/data/mutff45/charmm22starmut.ff/aminoacids.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,012   copying src/pmx/data/mutff45/charmm22starmut.ff/aminoacids.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,014   copying src/pmx/data/mutff45/charmm22starmut.ff/aminoacids.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,017   copying src/pmx/data/mutff45/charmm22starmut.ff/aminoacids.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,019   copying src/pmx/data/mutff45/charmm22starmut.ff/aminoacids.vsd -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,021   copying src/pmx/data/mutff45/charmm22starmut.ff/dna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,023   copying src/pmx/data/mutff45/charmm22starmut.ff/dna.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,025   copying src/pmx/data/mutff45/charmm22starmut.ff/dna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,027   copying src/pmx/data/mutff45/charmm22starmut.ff/dna.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,029   copying src/pmx/data/mutff45/charmm22starmut.ff/dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,032   copying src/pmx/data/mutff45/charmm22starmut.ff/ffbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,036   copying src/pmx/data/mutff45/charmm22starmut.ff/ffnanonbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,039   copying src/pmx/data/mutff45/charmm22starmut.ff/forcefield.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,041   copying src/pmx/data/mutff45/charmm22starmut.ff/gb.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,043   copying src/pmx/data/mutff45/charmm22starmut.ff/ions.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,045   copying src/pmx/data/mutff45/charmm22starmut.ff/lipids.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,047   copying src/pmx/data/mutff45/charmm22starmut.ff/lipids.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,050   copying src/pmx/data/mutff45/charmm22starmut.ff/mutres.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,052   copying src/pmx/data/mutff45/charmm22starmut.ff/rna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,055   copying src/pmx/data/mutff45/charmm22starmut.ff/rna.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,057   copying src/pmx/data/mutff45/charmm22starmut.ff/rna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,061   copying src/pmx/data/mutff45/charmm22starmut.ff/rna.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,063   copying src/pmx/data/mutff45/charmm22starmut.ff/rna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,065   copying src/pmx/data/mutff45/charmm22starmut.ff/rna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,067   copying src/pmx/data/mutff45/charmm22starmut.ff/spc.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,069   copying src/pmx/data/mutff45/charmm22starmut.ff/spce.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,071   copying src/pmx/data/mutff45/charmm22starmut.ff/tip3p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,073   copying src/pmx/data/mutff45/charmm22starmut.ff/tip4p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,075   copying src/pmx/data/mutff45/charmm22starmut.ff/tip4pew.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,077   copying src/pmx/data/mutff45/charmm22starmut.ff/tip5p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,079   copying src/pmx/data/mutff45/charmm22starmut.ff/watermodels.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:17,081   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm36mut.ff
2023-06-19T14:43:17,082   copying src/pmx/data/mutff45/charmm36mut.ff/aminoacids.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm36mut.ff
2023-06-19T14:43:17,084   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna
2023-06-19T14:43:17,084   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,085   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,091   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.arn_backup -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,093   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,095   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,098   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,100   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,102   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,107   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.vsd -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,109   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/atomtypes.atp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,111   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/backup_ffbonded_for_ildn_test.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,114   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/backup_mutres -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,143   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/correct_ffbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,146   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,148   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,149   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,151   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,154   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffberger.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,157   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,160   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffnonbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,162   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/forcefield.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,165   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/gbsa.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,167   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ions.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,169   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres.mtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,226   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,245   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres_dna.mtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,255   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres_dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,260   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/popc_AmbBer.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,263   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/popc_AmbBer_posre.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,266   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,268   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,271   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,273   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,277   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/spc.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,279   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/spce.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,281   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip3p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,284   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip4p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,286   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip4pew.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,288   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip5p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,291   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/urea.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,293   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/watermodels.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:17,295   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,296   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,299   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,301   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,304   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,306   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,308   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,313   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.vsd -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,316   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/atomtypes.atp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,318   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/backup_ffbonded_for_ildn_test.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,322   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/correct_ffbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,325   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,327   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,329   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,331   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,335   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ffberger.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,337   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ffnonbonded.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,340   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/forcefield.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,342   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/gbsa.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,344   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ions.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,347   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/mutres_dna.mtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,356   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/mutres_dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,362   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/popc_AmbBer.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,365   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/popc_AmbBer_posre.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,368   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,370   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,372   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,375   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,378   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/spc.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,380   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/spce.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,383   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip3p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,385   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip4p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,387   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip4pew.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,390   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip5p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,392   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/urea.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,395   copying src/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/watermodels.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:17,397   creating build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,398   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/cmap.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,402   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/forcefield.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,405   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/gb.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,407   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/ions.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,410   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.arn -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,412   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.c.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,414   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.hdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,418   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.n.tdb -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,420   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.r2b -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,422   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,442   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/merged.vsd -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,445   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/mutres_dna.mtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,455   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/mutres_dna.rtp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,459   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/nbfix.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,461   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/spc.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,463   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/spce.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,465   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/tip3p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,467   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/tip4p.itp -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,469   copying src/pmx/data/mutff45dna/charmm36m-mut.ff/watermodels.dat -> build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:17,471   creating build/lib.linux-armv7l-cpython-39/pmx/extensions
2023-06-19T14:43:17,471   creating build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,472   copying src/pmx/extensions/pmx/Energy.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,475   copying src/pmx/extensions/pmx/Geometry.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,478   copying src/pmx/extensions/pmx/Geometry.h -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,480   copying src/pmx/extensions/pmx/cpp_test.cpp -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,482   copying src/pmx/extensions/pmx/init.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,484   copying src/pmx/extensions/pmx/pmx.h -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,487   copying src/pmx/extensions/pmx/wrap_Geometry.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx
2023-06-19T14:43:17,489   creating build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,490   copying src/pmx/extensions/xdr/trr2xtc.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,493   copying src/pmx/extensions/xdr/xdrfile.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,496   copying src/pmx/extensions/xdr/xdrfile.h -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,499   copying src/pmx/extensions/xdr/xdrfile_c_test.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,502   copying src/pmx/extensions/xdr/xdrfile_trr.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,504   copying src/pmx/extensions/xdr/xdrfile_trr.h -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,506   copying src/pmx/extensions/xdr/xdrfile_xtc.c -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,508   copying src/pmx/extensions/xdr/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr
2023-06-19T14:43:17,510   creating build/lib.linux-armv7l-cpython-39/pmx/scripts
2023-06-19T14:43:17,511   copying src/pmx/scripts/md_setup.py -> build/lib.linux-armv7l-cpython-39/pmx/scripts
2023-06-19T14:43:17,514   creating build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands
2023-06-19T14:43:17,515   copying src/pmx/scripts/ligands/atoms_to_morph.py -> build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands
2023-06-19T14:43:17,520   copying src/pmx/scripts/ligands/atoms_to_morph_rdkit2018.py -> build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands
2023-06-19T14:43:17,525   copying src/pmx/scripts/ligands/build_mst_graph.py -> build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands
2023-06-19T14:43:17,529   copying src/pmx/scripts/ligands/make_hybrid.py -> build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands
2023-06-19T14:43:17,533   copying src/pmx/scripts/ligands/one_ff_file.py -> build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands
2023-06-19T14:43:17,537   UPDATING build/lib.linux-armv7l-cpython-39/pmx/_version.py
2023-06-19T14:43:17,538   set build/lib.linux-armv7l-cpython-39/pmx/_version.py to '4.0.0'
2023-06-19T14:43:17,539   running build_ext
2023-06-19T14:43:17,547   building 'pmx._pmx' extension
2023-06-19T14:43:17,548   creating build/temp.linux-armv7l-cpython-39
2023-06-19T14:43:17,549   creating build/temp.linux-armv7l-cpython-39/src
2023-06-19T14:43:17,550   creating build/temp.linux-armv7l-cpython-39/src/pmx
2023-06-19T14:43:17,550   creating build/temp.linux-armv7l-cpython-39/src/pmx/extensions
2023-06-19T14:43:17,551   creating build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx
2023-06-19T14:43:17,552   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/pmx -I/usr/include/python3.9 -c src/pmx/extensions/pmx/Energy.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/Energy.o
2023-06-19T14:43:18,531   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/pmx -I/usr/include/python3.9 -c src/pmx/extensions/pmx/Geometry.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/Geometry.o
2023-06-19T14:43:18,842   src/pmx/extensions/pmx/Geometry.c: In function ‘spread_atoms_on_grid’:
2023-06-19T14:43:18,843   src/pmx/extensions/pmx/Geometry.c:527:15: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:18,843     527 |   int nx, ny, nz;
2023-06-19T14:43:18,843         |               ^~
2023-06-19T14:43:18,843   src/pmx/extensions/pmx/Geometry.c: In function ‘search_neighbors’:
2023-06-19T14:43:18,844   src/pmx/extensions/pmx/Geometry.c:586:15: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:18,844     586 |   int nx, ny, nz;
2023-06-19T14:43:18,844         |               ^~
2023-06-19T14:43:20,484   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/pmx -I/usr/include/python3.9 -c src/pmx/extensions/pmx/init.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/init.o
2023-06-19T14:43:20,815   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/pmx -I/usr/include/python3.9 -c src/pmx/extensions/pmx/wrap_Geometry.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/wrap_Geometry.o
2023-06-19T14:43:22,171   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/Energy.o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/Geometry.o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/init.o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/pmx/wrap_Geometry.o -L/usr/lib -lm -o build/lib.linux-armv7l-cpython-39/pmx/_pmx.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:43:22,293   building 'pmx._xdrio' extension
2023-06-19T14:43:22,294   creating build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr
2023-06-19T14:43:22,295   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/xdr -I/usr/include/python3.9 -c src/pmx/extensions/xdr/xdrfile.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr/xdrfile.o
2023-06-19T14:43:22,337   src/pmx/extensions/xdr/xdrfile.c:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:22,337       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:22,338         |
2023-06-19T14:43:22,411   In file included from src/pmx/extensions/xdr/xdrfile.c:60:
2023-06-19T14:43:22,411   src/pmx/extensions/xdr/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:22,412       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:22,412         |
2023-06-19T14:43:22,418   src/pmx/extensions/xdr/xdrfile.c: In function ‘sizeofint’:
2023-06-19T14:43:22,418   src/pmx/extensions/xdr/xdrfile.c:499:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,418     499 |     while (size >= num && num_of_bits < 32)
2023-06-19T14:43:22,419         |                 ^~
2023-06-19T14:43:22,419   src/pmx/extensions/xdr/xdrfile.c: In function ‘sizeofints’:
2023-06-19T14:43:22,419   src/pmx/extensions/xdr/xdrfile.c:545:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,419     545 |     while (bytes[num_of_bytes] >= num)
2023-06-19T14:43:22,419         |                                ^~
2023-06-19T14:43:22,420   src/pmx/extensions/xdr/xdrfile.c: In function ‘encodeints’:
2023-06-19T14:43:22,420   src/pmx/extensions/xdr/xdrfile.c:654:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,420     654 |     if (num_of_bits >= num_of_bytes * 8)
2023-06-19T14:43:22,420         |                     ^~
2023-06-19T14:43:22,421   src/pmx/extensions/xdr/xdrfile.c:656:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,421     656 |   for (i = 0; i < num_of_bytes; i++)
2023-06-19T14:43:22,421         |                 ^
2023-06-19T14:43:22,421   src/pmx/extensions/xdr/xdrfile.c:664:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,421     664 |   for (i = 0; i < num_of_bytes-1; i++)
2023-06-19T14:43:22,421         |                 ^
2023-06-19T14:43:22,421   src/pmx/extensions/xdr/xdrfile.c: In function ‘decodebits’:
2023-06-19T14:43:22,422   src/pmx/extensions/xdr/xdrfile.c:704:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,422     704 |   if (lastbits < num_of_bits)
2023-06-19T14:43:22,422         |                ^
2023-06-19T14:43:22,423   src/pmx/extensions/xdr/xdrfile.c: In function ‘xdrfile_decompress_coord_float’:
2023-06-19T14:43:22,424   src/pmx/extensions/xdr/xdrfile.c:814:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,424     814 |  if(size3>xfp->buf1size)
2023-06-19T14:43:22,424         |          ^
2023-06-19T14:43:22,426   src/pmx/extensions/xdr/xdrfile.c:866:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,426     866 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,426         |                   ^
2023-06-19T14:43:22,426   src/pmx/extensions/xdr/xdrfile.c:866:37: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘unsigned int’ due to unsignedness of other operand [-Wsign-compare]
2023-06-19T14:43:22,426     866 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,426         |                                     ^~~
2023-06-19T14:43:22,429   src/pmx/extensions/xdr/xdrfile.c:792:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:22,429     792 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-06-19T14:43:22,429         |                         ^~~~~~
2023-06-19T14:43:22,429   src/pmx/extensions/xdr/xdrfile.c:789:16: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:22,429     789 |  int smallidx, minidx, maxidx;
2023-06-19T14:43:22,429         |                ^~~~~~
2023-06-19T14:43:22,430   src/pmx/extensions/xdr/xdrfile.c: In function ‘xdrfile_compress_coord_float’:
2023-06-19T14:43:22,430   src/pmx/extensions/xdr/xdrfile.c:1010:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,430    1010 |  if(size3>xfp->buf1size)
2023-06-19T14:43:22,430         |          ^
2023-06-19T14:43:22,435   src/pmx/extensions/xdr/xdrfile.c:1133:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,435    1133 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-06-19T14:43:22,435         |                  ^
2023-06-19T14:43:22,436   src/pmx/extensions/xdr/xdrfile.c:1139:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,436    1139 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,436         |                   ^
2023-06-19T14:43:22,436   src/pmx/extensions/xdr/xdrfile.c:1139:37: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘unsigned int’ due to unsignedness of other operand [-Wsign-compare]
2023-06-19T14:43:22,436    1139 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,436         |                                     ^~~
2023-06-19T14:43:22,439   src/pmx/extensions/xdr/xdrfile.c:1271:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,440    1271 |  if(tmp==(unsigned int)buf2[0])
2023-06-19T14:43:22,440         |        ^~
2023-06-19T14:43:22,440   src/pmx/extensions/xdr/xdrfile.c:999:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:22,440     999 |  int errval=1;
2023-06-19T14:43:22,440         |      ^~~~~~
2023-06-19T14:43:22,441   src/pmx/extensions/xdr/xdrfile.c: In function ‘xdrfile_decompress_coord_double’:
2023-06-19T14:43:22,442   src/pmx/extensions/xdr/xdrfile.c:1311:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,442    1311 |  if(size3>xfp->buf1size)
2023-06-19T14:43:22,442         |          ^
2023-06-19T14:43:22,444   src/pmx/extensions/xdr/xdrfile.c:1366:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,444    1366 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,444         |                   ^
2023-06-19T14:43:22,444   src/pmx/extensions/xdr/xdrfile.c:1366:37: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘unsigned int’ due to unsignedness of other operand [-Wsign-compare]
2023-06-19T14:43:22,445    1366 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,445         |                                     ^~~
2023-06-19T14:43:22,448   src/pmx/extensions/xdr/xdrfile.c:1288:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:22,448    1288 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-06-19T14:43:22,448         |                         ^~~~~~
2023-06-19T14:43:22,448   src/pmx/extensions/xdr/xdrfile.c:1285:16: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:22,448    1285 |  int smallidx, minidx, maxidx;
2023-06-19T14:43:22,449         |                ^~~~~~
2023-06-19T14:43:22,449   src/pmx/extensions/xdr/xdrfile.c: In function ‘xdrfile_compress_coord_double’:
2023-06-19T14:43:22,450   src/pmx/extensions/xdr/xdrfile.c:1502:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,450    1502 |  if(size3>xfp->buf1size) {
2023-06-19T14:43:22,450         |          ^
2023-06-19T14:43:22,456   src/pmx/extensions/xdr/xdrfile.c:1617:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,457    1617 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-06-19T14:43:22,457         |                  ^
2023-06-19T14:43:22,457   src/pmx/extensions/xdr/xdrfile.c:1622:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:43:22,457    1622 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,457         |                   ^
2023-06-19T14:43:22,458   src/pmx/extensions/xdr/xdrfile.c:1622:37: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘unsigned int’ due to unsignedness of other operand [-Wsign-compare]
2023-06-19T14:43:22,458    1622 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:43:22,458         |                                     ^~~
2023-06-19T14:43:22,462   src/pmx/extensions/xdr/xdrfile.c:1732:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:43:22,462    1732 |  if(tmp==(unsigned int)buf2[0])
2023-06-19T14:43:22,462         |        ^~
2023-06-19T14:43:22,463   src/pmx/extensions/xdr/xdrfile.c:1492:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:43:22,463    1492 |  int errval=1;
2023-06-19T14:43:22,463         |      ^~~~~~
2023-06-19T14:43:24,557   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/xdr -I/usr/include/python3.9 -c src/pmx/extensions/xdr/xdrfile_trr.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr/xdrfile_trr.o
2023-06-19T14:43:24,598   src/pmx/extensions/xdr/xdrfile_trr.c:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:24,598       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:24,599         |
2023-06-19T14:43:24,632   In file included from src/pmx/extensions/xdr/xdrfile_trr.c:41:
2023-06-19T14:43:24,632   src/pmx/extensions/xdr/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:24,632       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:24,632         |
2023-06-19T14:43:24,634   In file included from src/pmx/extensions/xdr/xdrfile_trr.c:42:
2023-06-19T14:43:24,634   src/pmx/extensions/xdr/xdrfile_trr.h:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:24,634       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:24,634         |
2023-06-19T14:43:24,636   src/pmx/extensions/xdr/xdrfile_trr.c: In function ‘do_trnheader’:
2023-06-19T14:43:24,636   src/pmx/extensions/xdr/xdrfile_trr.c:108:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-06-19T14:43:24,636     108 |         if (slen != strlen(version)+1)
2023-06-19T14:43:24,636         |                  ^~
2023-06-19T14:43:24,636   src/pmx/extensions/xdr/xdrfile_trr.c:118:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-06-19T14:43:24,637     118 |         if (xdrfile_write_string(version,xd) != (strlen(version)+1) )
2023-06-19T14:43:24,637         |                                              ^~
2023-06-19T14:43:25,222   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/pmx/extensions/xdr -I/usr/include/python3.9 -c src/pmx/extensions/xdr/xdrfile_xtc.c -o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr/xdrfile_xtc.o
2023-06-19T14:43:25,291   In file included from src/pmx/extensions/xdr/xdrfile_xtc.c:31:
2023-06-19T14:43:25,291   src/pmx/extensions/xdr/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:25,292       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:25,292         |
2023-06-19T14:43:25,292   In file included from src/pmx/extensions/xdr/xdrfile_xtc.c:32:
2023-06-19T14:43:25,293   src/pmx/extensions/xdr/xdrfile_xtc.h:5:2: warning: "/*" within comment [-Wcomment]
2023-06-19T14:43:25,293       5 |  /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*-
2023-06-19T14:43:25,293         |
2023-06-19T14:43:25,294   src/pmx/extensions/xdr/xdrfile_xtc.c: In function ‘xtc_coord’:
2023-06-19T14:43:25,294   src/pmx/extensions/xdr/xdrfile_xtc.c:66:8: warning: unused variable ‘j’ [-Wunused-variable]
2023-06-19T14:43:25,294      66 |  int i,j,result;
2023-06-19T14:43:25,294         |        ^
2023-06-19T14:43:25,295   src/pmx/extensions/xdr/xdrfile_xtc.c:66:6: warning: unused variable ‘i’ [-Wunused-variable]
2023-06-19T14:43:25,295      66 |  int i,j,result;
2023-06-19T14:43:25,296         |      ^
2023-06-19T14:43:25,413   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr/xdrfile.o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr/xdrfile_trr.o build/temp.linux-armv7l-cpython-39/src/pmx/extensions/xdr/xdrfile_xtc.o -L/usr/lib -lm -o build/lib.linux-armv7l-cpython-39/pmx/_xdrio.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:43:25,554   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-06-19T14:43:25,554   !!

2023-06-19T14:43:25,554           ********************************************************************************
2023-06-19T14:43:25,555           Please avoid running ``setup.py`` directly.
2023-06-19T14:43:25,555           Instead, use pypa/build, pypa/installer, pypa/build or
2023-06-19T14:43:25,555           other standards-based tools.

2023-06-19T14:43:25,555           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-06-19T14:43:25,555           ********************************************************************************

2023-06-19T14:43:25,555   !!
2023-06-19T14:43:25,556     self.initialize_options()
2023-06-19T14:43:25,582   installing to build/bdist.linux-armv7l/wheel
2023-06-19T14:43:25,583   running install
2023-06-19T14:43:25,608   running install_lib
2023-06-19T14:43:25,639   creating build/bdist.linux-armv7l
2023-06-19T14:43:25,639   creating build/bdist.linux-armv7l/wheel
2023-06-19T14:43:25,641   creating build/bdist.linux-armv7l/wheel/pmx
2023-06-19T14:43:25,642   copying build/lib.linux-armv7l-cpython-39/pmx/_xdrio.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pmx
2023-06-19T14:43:25,646   copying build/lib.linux-armv7l-cpython-39/pmx/_pmx.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pmx
2023-06-19T14:43:25,651   creating build/bdist.linux-armv7l/wheel/pmx/extensions
2023-06-19T14:43:25,653   creating build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,654   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/init.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,656   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/cpp_test.cpp -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,658   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/wrap_Geometry.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,660   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/Geometry.h -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,663   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/Energy.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,665   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/Geometry.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,667   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/pmx/pmx.h -> build/bdist.linux-armv7l/wheel/pmx/extensions/pmx
2023-06-19T14:43:25,670   creating build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,671   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/trr2xtc.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,673   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,677   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile_trr.h -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,679   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile.h -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,681   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile_trr.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,684   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile_c_test.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,686   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,688   copying build/lib.linux-armv7l-cpython-39/pmx/extensions/xdr/xdrfile_xtc.c -> build/bdist.linux-armv7l/wheel/pmx/extensions/xdr
2023-06-19T14:43:25,690   copying build/lib.linux-armv7l-cpython-39/pmx/_version.py -> build/bdist.linux-armv7l/wheel/pmx
2023-06-19T14:43:25,692   creating build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:25,693   copying build/lib.linux-armv7l-cpython-39/pmx/data/rna.pkl -> build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:25,698   copying build/lib.linux-armv7l-cpython-39/pmx/data/bp.pkl -> build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:25,703   copying build/lib.linux-armv7l-cpython-39/pmx/data/blosum62_new.mat -> build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:25,705   copying build/lib.linux-armv7l-cpython-39/pmx/data/bp_amber.pkl -> build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:25,711   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna
2023-06-19T14:43:25,713   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,714   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,716   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,718   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,746   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,748   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/popc_AmbBer.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,750   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres.mtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,792   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/backup_mutres -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,815   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/spce.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,817   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffberger.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,819   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/urea.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,821   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/backup_ffbonded_for_ildn_test.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,824   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,827   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,829   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ions.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,832   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/popc_AmbBer_posre.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,834   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,838   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,842   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,844   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,846   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip4pew.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,848   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres_dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,853   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/gbsa.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,855   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/spc.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,857   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,860   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres_dna.mtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,866   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,869   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,871   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,874   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,876   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.arn_backup -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,879   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.vsd -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,881   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/correct_ffbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,884   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,887   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,889   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,892   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,894   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,896   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip5p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,899   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/atomtypes.atp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,901   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff
2023-06-19T14:43:25,905   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,906   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,909   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,911   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/spce.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,913   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/gb.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,915   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,918   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/ions.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,920   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/cmap.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,925   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,927   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,929   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,957   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,959   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/mutres_dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,964   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/spc.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,966   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/mutres_dna.mtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,975   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,978   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/merged.vsd -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,980   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/nbfix.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,982   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,984   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/charmm36m-mut.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/charmm36m-mut.ff
2023-06-19T14:43:25,987   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:25,988   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:25,990   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:25,992   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:25,994   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/popc_AmbBer.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:25,997   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/spce.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,000   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ffberger.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,002   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/urea.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,005   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/backup_ffbonded_for_ildn_test.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,008   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,011   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,013   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ions.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,015   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/popc_AmbBer_posre.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,018   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,022   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,026   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,028   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,030   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip4pew.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,033   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/mutres_dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,038   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/gbsa.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,040   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/spc.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,042   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,044   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/mutres_dna.mtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,052   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,054   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,056   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,059   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.vsd -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,062   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/correct_ffbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,065   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,067   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,069   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,073   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,075   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,077   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip5p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,079   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/atomtypes.atp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,082   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,084   copying build/lib.linux-armv7l-cpython-39/pmx/data/bbdep.pkl -> build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:26,382   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45
2023-06-19T14:43:26,383   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/specbond.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45
2023-06-19T14:43:26,386   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,387   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/lipids.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,389   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,391   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,393   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/dna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,395   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/mutres.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,396   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/spce.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,398   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/rna.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,400   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/dna.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,403   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/gb.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,405   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/aminoacids.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,407   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/ions.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,409   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/rna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,411   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/aminoacids.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,413   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/tip4pew.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,416   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/rna.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,418   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/ffnanonbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,421   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/spc.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,423   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/rna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,425   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/dna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,427   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/rna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,429   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,433   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/rna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,436   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/aminoacids.vsd -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,438   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/aminoacids.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,441   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,443   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/dna.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,445   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,447   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,450   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/lipids.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,453   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/tip5p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,455   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm22starmut.ff/aminoacids.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm22starmut.ff
2023-06-19T14:43:26,457   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/xlateat.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45
2023-06-19T14:43:26,459   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/elements.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45
2023-06-19T14:43:26,462   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,463   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,466   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/Makefile.in -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,468   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,470   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/dna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,472   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/spce.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,474   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/urea.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,476   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/aminoacids.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,478   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/rna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,481   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/dna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,483   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/Makefile.am -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,485   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/tip4pew.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,487   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/gbsa.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,489   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/spc.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,491   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/rna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,493   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/dna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,496   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/rna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,498   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/rna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,500   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/aminoacids.vsd -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,503   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/aminoacids.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,505   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/aminoacids.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,508   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,511   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,513   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sbmut.ff/tip5p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sbmut.ff
2023-06-19T14:43:26,515   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/atommass.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45
2023-06-19T14:43:26,517   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm36mut.ff
2023-06-19T14:43:26,519   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/charmm36mut.ff/aminoacids.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/charmm36mut.ff
2023-06-19T14:43:26,522   creating build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,523   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,525   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,527   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/mutres.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,546   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,548   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/mutres.mtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,595   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/backup_mutres -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,621   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/spce.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,623   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/urea.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,625   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.n.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,627   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/ions.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,629   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,631   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,633   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,635   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip4pew.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,636   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/gbsa.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,638   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/spc.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,640   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.r2b -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,642   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,644   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.arn -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,645   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,648   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,650   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.vsd -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,653   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.c.tdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,654   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.hdb -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,657   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.rtp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,660   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,661   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,663   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip5p.itp -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45/amber99sb-star-ildn-mut.ff
2023-06-19T14:43:26,665   copying build/lib.linux-armv7l-cpython-39/pmx/data/mutff45/spc216.gro -> build/bdist.linux-armv7l/wheel/pmx/data/mutff45
2023-06-19T14:43:26,668   copying build/lib.linux-armv7l-cpython-39/pmx/data/bp_charmm.pkl -> build/bdist.linux-armv7l/wheel/pmx/data
2023-06-19T14:43:26,674   creating build/bdist.linux-armv7l/wheel/pmx/scripts
2023-06-19T14:43:26,675   copying build/lib.linux-armv7l-cpython-39/pmx/scripts/md_setup.py -> build/bdist.linux-armv7l/wheel/pmx/scripts
2023-06-19T14:43:26,678   creating build/bdist.linux-armv7l/wheel/pmx/scripts/ligands
2023-06-19T14:43:26,679   copying build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands/build_mst_graph.py -> build/bdist.linux-armv7l/wheel/pmx/scripts/ligands
2023-06-19T14:43:26,682   copying build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands/make_hybrid.py -> build/bdist.linux-armv7l/wheel/pmx/scripts/ligands
2023-06-19T14:43:26,685   copying build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands/atoms_to_morph.py -> build/bdist.linux-armv7l/wheel/pmx/scripts/ligands
2023-06-19T14:43:26,689   copying build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands/one_ff_file.py -> build/bdist.linux-armv7l/wheel/pmx/scripts/ligands
2023-06-19T14:43:26,691   copying build/lib.linux-armv7l-cpython-39/pmx/scripts/ligands/atoms_to_morph_rdkit2018.py -> build/bdist.linux-armv7l/wheel/pmx/scripts/ligands
2023-06-19T14:43:26,694   running install_egg_info
2023-06-19T14:43:26,724   Copying src/pmx_biobb.egg-info to build/bdist.linux-armv7l/wheel/pmx_biobb-4.0.0-py3.9.egg-info
2023-06-19T14:43:26,740   running install_scripts
2023-06-19T14:43:26,794   creating build/bdist.linux-armv7l/wheel/pmx_biobb-4.0.0.dist-info/WHEEL
2023-06-19T14:43:26,796   creating '/tmp/pip-wheel-983rc3e7/pmx_biobb-4.0.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-19T14:43:26,835   adding 'pmx/_pmx.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:43:26,838   adding 'pmx/_version.py'
2023-06-19T14:43:26,863   adding 'pmx/_xdrio.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:43:28,700   adding 'pmx/data/bbdep.pkl'
2023-06-19T14:43:28,809   adding 'pmx/data/blosum62_new.mat'
2023-06-19T14:43:28,825   adding 'pmx/data/bp.pkl'
2023-06-19T14:43:28,846   adding 'pmx/data/bp_amber.pkl'
2023-06-19T14:43:28,867   adding 'pmx/data/bp_charmm.pkl'
2023-06-19T14:43:28,877   adding 'pmx/data/rna.pkl'
2023-06-19T14:43:28,880   adding 'pmx/data/mutff45/atommass.dat'
2023-06-19T14:43:28,882   adding 'pmx/data/mutff45/elements.dat'
2023-06-19T14:43:28,888   adding 'pmx/data/mutff45/spc216.gro'
2023-06-19T14:43:28,889   adding 'pmx/data/mutff45/specbond.dat'
2023-06-19T14:43:28,891   adding 'pmx/data/mutff45/xlateat.dat'
2023-06-19T14:43:28,893   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.c.tdb'
2023-06-19T14:43:28,894   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.hdb'
2023-06-19T14:43:28,895   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.n.tdb'
2023-06-19T14:43:28,897   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.r2b'
2023-06-19T14:43:28,898   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/aminoacids.vsd'
2023-06-19T14:43:28,961   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/backup_mutres'
2023-06-19T14:43:28,969   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.arn'
2023-06-19T14:43:28,970   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.hdb'
2023-06-19T14:43:28,972   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.r2b'
2023-06-19T14:43:28,974   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/dna.rtp'
2023-06-19T14:43:28,978   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/ffbonded.itp'
2023-06-19T14:43:28,980   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/forcefield.itp'
2023-06-19T14:43:28,981   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/gbsa.itp'
2023-06-19T14:43:28,983   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/ions.itp'
2023-06-19T14:43:29,141   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/mutres.mtp'
2023-06-19T14:43:29,219   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/mutres.rtp'
2023-06-19T14:43:29,227   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.arn'
2023-06-19T14:43:29,228   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.hdb'
2023-06-19T14:43:29,230   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.r2b'
2023-06-19T14:43:29,232   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/rna.rtp'
2023-06-19T14:43:29,234   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/spc.itp'
2023-06-19T14:43:29,235   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/spce.itp'
2023-06-19T14:43:29,236   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip3p.itp'
2023-06-19T14:43:29,237   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip4p.itp'
2023-06-19T14:43:29,239   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip4pew.itp'
2023-06-19T14:43:29,240   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/tip5p.itp'
2023-06-19T14:43:29,241   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/urea.itp'
2023-06-19T14:43:29,242   adding 'pmx/data/mutff45/amber99sb-star-ildn-mut.ff/watermodels.dat'
2023-06-19T14:43:29,244   adding 'pmx/data/mutff45/amber99sbmut.ff/Makefile.am'
2023-06-19T14:43:29,246   adding 'pmx/data/mutff45/amber99sbmut.ff/Makefile.in'
2023-06-19T14:43:29,248   adding 'pmx/data/mutff45/amber99sbmut.ff/aminoacids.c.tdb'
2023-06-19T14:43:29,249   adding 'pmx/data/mutff45/amber99sbmut.ff/aminoacids.hdb'
2023-06-19T14:43:29,250   adding 'pmx/data/mutff45/amber99sbmut.ff/aminoacids.n.tdb'
2023-06-19T14:43:29,252   adding 'pmx/data/mutff45/amber99sbmut.ff/aminoacids.vsd'
2023-06-19T14:43:29,253   adding 'pmx/data/mutff45/amber99sbmut.ff/dna.arn'
2023-06-19T14:43:29,254   adding 'pmx/data/mutff45/amber99sbmut.ff/dna.hdb'
2023-06-19T14:43:29,256   adding 'pmx/data/mutff45/amber99sbmut.ff/dna.r2b'
2023-06-19T14:43:29,258   adding 'pmx/data/mutff45/amber99sbmut.ff/dna.rtp'
2023-06-19T14:43:29,260   adding 'pmx/data/mutff45/amber99sbmut.ff/gbsa.itp'
2023-06-19T14:43:29,261   adding 'pmx/data/mutff45/amber99sbmut.ff/rna.arn'
2023-06-19T14:43:29,262   adding 'pmx/data/mutff45/amber99sbmut.ff/rna.hdb'
2023-06-19T14:43:29,263   adding 'pmx/data/mutff45/amber99sbmut.ff/rna.r2b'
2023-06-19T14:43:29,266   adding 'pmx/data/mutff45/amber99sbmut.ff/rna.rtp'
2023-06-19T14:43:29,267   adding 'pmx/data/mutff45/amber99sbmut.ff/spc.itp'
2023-06-19T14:43:29,268   adding 'pmx/data/mutff45/amber99sbmut.ff/spce.itp'
2023-06-19T14:43:29,269   adding 'pmx/data/mutff45/amber99sbmut.ff/tip3p.itp'
2023-06-19T14:43:29,271   adding 'pmx/data/mutff45/amber99sbmut.ff/tip4p.itp'
2023-06-19T14:43:29,272   adding 'pmx/data/mutff45/amber99sbmut.ff/tip4pew.itp'
2023-06-19T14:43:29,273   adding 'pmx/data/mutff45/amber99sbmut.ff/tip5p.itp'
2023-06-19T14:43:29,274   adding 'pmx/data/mutff45/amber99sbmut.ff/urea.itp'
2023-06-19T14:43:29,276   adding 'pmx/data/mutff45/amber99sbmut.ff/watermodels.dat'
2023-06-19T14:43:29,278   adding 'pmx/data/mutff45/charmm22starmut.ff/aminoacids.arn'
2023-06-19T14:43:29,279   adding 'pmx/data/mutff45/charmm22starmut.ff/aminoacids.c.tdb'
2023-06-19T14:43:29,280   adding 'pmx/data/mutff45/charmm22starmut.ff/aminoacids.n.tdb'
2023-06-19T14:43:29,281   adding 'pmx/data/mutff45/charmm22starmut.ff/aminoacids.r2b'
2023-06-19T14:43:29,283   adding 'pmx/data/mutff45/charmm22starmut.ff/aminoacids.vsd'
2023-06-19T14:43:29,284   adding 'pmx/data/mutff45/charmm22starmut.ff/dna.arn'
2023-06-19T14:43:29,285   adding 'pmx/data/mutff45/charmm22starmut.ff/dna.c.tdb'
2023-06-19T14:43:29,287   adding 'pmx/data/mutff45/charmm22starmut.ff/dna.hdb'
2023-06-19T14:43:29,288   adding 'pmx/data/mutff45/charmm22starmut.ff/dna.n.tdb'
2023-06-19T14:43:29,290   adding 'pmx/data/mutff45/charmm22starmut.ff/dna.rtp'
2023-06-19T14:43:29,297   adding 'pmx/data/mutff45/charmm22starmut.ff/ffbonded.itp'
2023-06-19T14:43:29,302   adding 'pmx/data/mutff45/charmm22starmut.ff/ffnanonbonded.itp'
2023-06-19T14:43:29,303   adding 'pmx/data/mutff45/charmm22starmut.ff/forcefield.itp'
2023-06-19T14:43:29,305   adding 'pmx/data/mutff45/charmm22starmut.ff/gb.itp'
2023-06-19T14:43:29,306   adding 'pmx/data/mutff45/charmm22starmut.ff/ions.itp'
2023-06-19T14:43:29,307   adding 'pmx/data/mutff45/charmm22starmut.ff/lipids.hdb'
2023-06-19T14:43:29,311   adding 'pmx/data/mutff45/charmm22starmut.ff/lipids.rtp'
2023-06-19T14:43:29,313   adding 'pmx/data/mutff45/charmm22starmut.ff/mutres.arn'
2023-06-19T14:43:29,314   adding 'pmx/data/mutff45/charmm22starmut.ff/rna.arn'
2023-06-19T14:43:29,315   adding 'pmx/data/mutff45/charmm22starmut.ff/rna.c.tdb'
2023-06-19T14:43:29,316   adding 'pmx/data/mutff45/charmm22starmut.ff/rna.hdb'
2023-06-19T14:43:29,317   adding 'pmx/data/mutff45/charmm22starmut.ff/rna.n.tdb'
2023-06-19T14:43:29,318   adding 'pmx/data/mutff45/charmm22starmut.ff/rna.r2b'
2023-06-19T14:43:29,320   adding 'pmx/data/mutff45/charmm22starmut.ff/rna.rtp'
2023-06-19T14:43:29,322   adding 'pmx/data/mutff45/charmm22starmut.ff/spc.itp'
2023-06-19T14:43:29,323   adding 'pmx/data/mutff45/charmm22starmut.ff/spce.itp'
2023-06-19T14:43:29,324   adding 'pmx/data/mutff45/charmm22starmut.ff/tip3p.itp'
2023-06-19T14:43:29,325   adding 'pmx/data/mutff45/charmm22starmut.ff/tip4p.itp'
2023-06-19T14:43:29,326   adding 'pmx/data/mutff45/charmm22starmut.ff/tip4pew.itp'
2023-06-19T14:43:29,328   adding 'pmx/data/mutff45/charmm22starmut.ff/tip5p.itp'
2023-06-19T14:43:29,329   adding 'pmx/data/mutff45/charmm22starmut.ff/watermodels.dat'
2023-06-19T14:43:29,331   adding 'pmx/data/mutff45/charmm36mut.ff/aminoacids.arn'
2023-06-19T14:43:29,335   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.arn'
2023-06-19T14:43:29,336   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.arn_backup'
2023-06-19T14:43:29,337   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.c.tdb'
2023-06-19T14:43:29,339   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.hdb'
2023-06-19T14:43:29,340   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.n.tdb'
2023-06-19T14:43:29,341   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.r2b'
2023-06-19T14:43:29,349   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.rtp'
2023-06-19T14:43:29,352   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/aminoacids.vsd'
2023-06-19T14:43:29,353   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/atomtypes.atp'
2023-06-19T14:43:29,357   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/backup_ffbonded_for_ildn_test.itp'
2023-06-19T14:43:29,419   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/backup_mutres'
2023-06-19T14:43:29,431   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/correct_ffbonded.itp'
2023-06-19T14:43:29,432   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.arn'
2023-06-19T14:43:29,434   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.hdb'
2023-06-19T14:43:29,435   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.r2b'
2023-06-19T14:43:29,437   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/dna.rtp'
2023-06-19T14:43:29,439   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffberger.itp'
2023-06-19T14:43:29,444   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffbonded.itp'
2023-06-19T14:43:29,446   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ffnonbonded.itp'
2023-06-19T14:43:29,447   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/forcefield.itp'
2023-06-19T14:43:29,449   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/gbsa.itp'
2023-06-19T14:43:29,450   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/ions.itp'
2023-06-19T14:43:29,607   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres.mtp'
2023-06-19T14:43:29,686   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres.rtp'
2023-06-19T14:43:29,711   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres_dna.mtp'
2023-06-19T14:43:29,721   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/mutres_dna.rtp'
2023-06-19T14:43:29,725   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/popc_AmbBer.itp'
2023-06-19T14:43:29,727   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/popc_AmbBer_posre.itp'
2023-06-19T14:43:29,729   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.arn'
2023-06-19T14:43:29,730   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.hdb'
2023-06-19T14:43:29,731   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.r2b'
2023-06-19T14:43:29,734   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/rna.rtp'
2023-06-19T14:43:29,735   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/spc.itp'
2023-06-19T14:43:29,736   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/spce.itp'
2023-06-19T14:43:29,738   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip3p.itp'
2023-06-19T14:43:29,739   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip4p.itp'
2023-06-19T14:43:29,740   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip4pew.itp'
2023-06-19T14:43:29,741   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/tip5p.itp'
2023-06-19T14:43:29,743   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/urea.itp'
2023-06-19T14:43:29,744   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-bsc1-mut.ff/watermodels.dat'
2023-06-19T14:43:29,746   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.arn'
2023-06-19T14:43:29,747   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.c.tdb'
2023-06-19T14:43:29,749   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.hdb'
2023-06-19T14:43:29,750   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.n.tdb'
2023-06-19T14:43:29,751   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.r2b'
2023-06-19T14:43:29,760   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.rtp'
2023-06-19T14:43:29,762   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/aminoacids.vsd'
2023-06-19T14:43:29,763   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/atomtypes.atp'
2023-06-19T14:43:29,767   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/backup_ffbonded_for_ildn_test.itp'
2023-06-19T14:43:29,771   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/correct_ffbonded.itp'
2023-06-19T14:43:29,773   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.arn'
2023-06-19T14:43:29,774   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.hdb'
2023-06-19T14:43:29,775   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.r2b'
2023-06-19T14:43:29,778   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/dna.rtp'
2023-06-19T14:43:29,780   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ffberger.itp'
2023-06-19T14:43:29,782   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ffnonbonded.itp'
2023-06-19T14:43:29,783   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/forcefield.itp'
2023-06-19T14:43:29,784   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/gbsa.itp'
2023-06-19T14:43:29,785   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/ions.itp'
2023-06-19T14:43:29,803   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/mutres_dna.mtp'
2023-06-19T14:43:29,813   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/mutres_dna.rtp'
2023-06-19T14:43:29,816   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/popc_AmbBer.itp'
2023-06-19T14:43:29,818   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/popc_AmbBer_posre.itp'
2023-06-19T14:43:29,820   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.arn'
2023-06-19T14:43:29,821   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.hdb'
2023-06-19T14:43:29,822   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.r2b'
2023-06-19T14:43:29,824   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/rna.rtp'
2023-06-19T14:43:29,826   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/spc.itp'
2023-06-19T14:43:29,827   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/spce.itp'
2023-06-19T14:43:29,828   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip3p.itp'
2023-06-19T14:43:29,830   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip4p.itp'
2023-06-19T14:43:29,831   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip4pew.itp'
2023-06-19T14:43:29,832   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/tip5p.itp'
2023-06-19T14:43:29,834   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/urea.itp'
2023-06-19T14:43:29,835   adding 'pmx/data/mutff45dna/amber99sb-star-ildn-mut.ff/watermodels.dat'
2023-06-19T14:43:29,848   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/cmap.itp'
2023-06-19T14:43:29,850   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/forcefield.itp'
2023-06-19T14:43:29,851   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/gb.itp'
2023-06-19T14:43:29,853   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/ions.itp'
2023-06-19T14:43:29,854   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.arn'
2023-06-19T14:43:29,855   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.c.tdb'
2023-06-19T14:43:29,857   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.hdb'
2023-06-19T14:43:29,858   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.n.tdb'
2023-06-19T14:43:29,859   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.r2b'
2023-06-19T14:43:29,997   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.rtp'
2023-06-19T14:43:30,006   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/merged.vsd'
2023-06-19T14:43:30,023   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/mutres_dna.mtp'
2023-06-19T14:43:30,032   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/mutres_dna.rtp'
2023-06-19T14:43:30,034   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/nbfix.itp'
2023-06-19T14:43:30,035   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/spc.itp'
2023-06-19T14:43:30,036   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/spce.itp'
2023-06-19T14:43:30,038   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/tip3p.itp'
2023-06-19T14:43:30,039   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/tip4p.itp'
2023-06-19T14:43:30,040   adding 'pmx/data/mutff45dna/charmm36m-mut.ff/watermodels.dat'
2023-06-19T14:43:30,043   adding 'pmx/extensions/pmx/Energy.c'
2023-06-19T14:43:30,045   adding 'pmx/extensions/pmx/Geometry.c'
2023-06-19T14:43:30,048   adding 'pmx/extensions/pmx/Geometry.h'
2023-06-19T14:43:30,050   adding 'pmx/extensions/pmx/cpp_test.cpp'
2023-06-19T14:43:30,051   adding 'pmx/extensions/pmx/init.c'
2023-06-19T14:43:30,052   adding 'pmx/extensions/pmx/pmx.h'
2023-06-19T14:43:30,055   adding 'pmx/extensions/pmx/wrap_Geometry.c'
2023-06-19T14:43:30,057   adding 'pmx/extensions/xdr/trr2xtc.c'
2023-06-19T14:43:30,064   adding 'pmx/extensions/xdr/xdrfile.c'
2023-06-19T14:43:30,067   adding 'pmx/extensions/xdr/xdrfile.h'
2023-06-19T14:43:30,069   adding 'pmx/extensions/xdr/xdrfile_c_test.c'
2023-06-19T14:43:30,071   adding 'pmx/extensions/xdr/xdrfile_trr.c'
2023-06-19T14:43:30,072   adding 'pmx/extensions/xdr/xdrfile_trr.h'
2023-06-19T14:43:30,074   adding 'pmx/extensions/xdr/xdrfile_xtc.c'
2023-06-19T14:43:30,075   adding 'pmx/extensions/xdr/xdrfile_xtc.h'
2023-06-19T14:43:30,078   adding 'pmx/scripts/md_setup.py'
2023-06-19T14:43:30,087   adding 'pmx/scripts/ligands/atoms_to_morph.py'
2023-06-19T14:43:30,098   adding 'pmx/scripts/ligands/atoms_to_morph_rdkit2018.py'
2023-06-19T14:43:30,101   adding 'pmx/scripts/ligands/build_mst_graph.py'
2023-06-19T14:43:30,106   adding 'pmx/scripts/ligands/make_hybrid.py'
2023-06-19T14:43:30,108   adding 'pmx/scripts/ligands/one_ff_file.py'
2023-06-19T14:43:30,111   adding 'pmx_biobb-4.0.0.dist-info/LICENSE'
2023-06-19T14:43:30,112   adding 'pmx_biobb-4.0.0.dist-info/METADATA'
2023-06-19T14:43:30,113   adding 'pmx_biobb-4.0.0.dist-info/WHEEL'
2023-06-19T14:43:30,114   adding 'pmx_biobb-4.0.0.dist-info/entry_points.txt'
2023-06-19T14:43:30,115   adding 'pmx_biobb-4.0.0.dist-info/top_level.txt'
2023-06-19T14:43:30,118   adding 'pmx_biobb-4.0.0.dist-info/RECORD'
2023-06-19T14:43:30,199   removing build/bdist.linux-armv7l/wheel
2023-06-19T14:43:30,358   Building wheel for pmx-biobb (setup.py): finished with status 'done'
2023-06-19T14:43:30,403   Created wheel for pmx-biobb: filename=pmx_biobb-4.0.0-cp39-cp39-linux_armv7l.whl size=4257348 sha256=62a965b247bcd5d3d8de872fe3c431c183e1e627d6e3103ae0fde87ff9df3ca3
2023-06-19T14:43:30,404   Stored in directory: /tmp/pip-ephem-wheel-cache-6kbh95h_/wheels/48/8e/18/d623212d6040de19edd068bd5aca145044cdcace1d9a3903e8
2023-06-19T14:43:30,423 Successfully built pmx-biobb
2023-06-19T14:43:30,541 Removed build tracker: '/tmp/pip-build-tracker-q8efa30s'