2023-06-19T14:43:37,399 Created temporary directory: /tmp/pip-build-tracker-bxwykn2i
2023-06-19T14:43:37,400 Initialized build tracking at /tmp/pip-build-tracker-bxwykn2i
2023-06-19T14:43:37,400 Created build tracker: /tmp/pip-build-tracker-bxwykn2i
2023-06-19T14:43:37,400 Entered build tracker: /tmp/pip-build-tracker-bxwykn2i
2023-06-19T14:43:37,401 Created temporary directory: /tmp/pip-wheel-84mfogny
2023-06-19T14:43:37,404 Created temporary directory: /tmp/pip-ephem-wheel-cache-aydgyj97
2023-06-19T14:43:37,427 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-19T14:43:37,430 2 location(s) to search for versions of moleculekit:
2023-06-19T14:43:37,430 * https://pypi.org/simple/moleculekit/
2023-06-19T14:43:37,430 * https://www.piwheels.org/simple/moleculekit/
2023-06-19T14:43:37,430 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-06-19T14:43:37,431 Getting page https://pypi.org/simple/moleculekit/
2023-06-19T14:43:37,433 Found index url https://pypi.org/simple/
2023-06-19T14:43:37,486 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-06-19T14:43:37,522   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,522   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-06-19T14:43:37,523   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,523   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-06-19T14:43:37,523   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,523   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-06-19T14:43:37,524   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,524   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-06-19T14:43:37,524   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,524   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-06-19T14:43:37,525   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,525   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-06-19T14:43:37,525   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,525   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-06-19T14:43:37,526   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,526   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-06-19T14:43:37,526   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,526   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-06-19T14:43:37,527   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,527   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-06-19T14:43:37,527   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,527   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-06-19T14:43:37,527   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,528   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-06-19T14:43:37,528   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,528   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-06-19T14:43:37,528   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,529   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-06-19T14:43:37,529   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,529   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-06-19T14:43:37,529   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,530   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-06-19T14:43:37,530   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,530   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-06-19T14:43:37,530   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,530   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-06-19T14:43:37,531   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,531   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-06-19T14:43:37,531   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,531   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-06-19T14:43:37,532   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,532   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-06-19T14:43:37,532   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,532   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-06-19T14:43:37,532   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,533   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-06-19T14:43:37,533   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,533   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-06-19T14:43:37,533   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,534   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-06-19T14:43:37,534   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,534   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-06-19T14:43:37,534   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,535   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-06-19T14:43:37,535   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,535   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-06-19T14:43:37,535   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,535   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-06-19T14:43:37,536   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,536   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-06-19T14:43:37,536   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,536   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-06-19T14:43:37,537   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,537   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-06-19T14:43:37,537   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-06-19T14:43:37,537   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
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2023-06-19T14:43:37,541   Found link https://files.pythonhosted.org/packages/67/47/5f9440683e69c1612d117c957044f665b4e025bffab93251e31444529fa6/moleculekit-0.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.0
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2023-06-19T14:43:37,554   Found link https://files.pythonhosted.org/packages/5c/b2/944d529319db190e13234dd2337bff23b7a7c3c1a98b2a95eb08fc802530/moleculekit-0.9.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.7
2023-06-19T14:43:37,554   Found link https://files.pythonhosted.org/packages/42/0a/fbfa3d5c838ad716fdcb9b5ad55bddb6dccd74c5c281ac171be93b0f58e2/moleculekit-0.9.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.8
2023-06-19T14:43:37,555   Found link https://files.pythonhosted.org/packages/15/e0/93b4cc5e997a9e4e01fd39f00548f04e3f068961abba30f82fc04aa828ac/moleculekit-0.9.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.9
2023-06-19T14:43:37,555   Found link https://files.pythonhosted.org/packages/7f/58/2f04c5387c3c23e5c46f71741f7655c380b01c6f88aad7b5e945943c3fd1/moleculekit-0.9.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.12
2023-06-19T14:43:37,555   Found link https://files.pythonhosted.org/packages/b5/7c/fde4b7b8c9cd6683036e87727f341a0c9de5dae09f324dfa1bc2aa2a6de0/moleculekit-0.9.13.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.13
2023-06-19T14:43:37,555   Found link https://files.pythonhosted.org/packages/8e/f7/39a1290893da55d759e629ea6d9e2509fe6c3a06538d3f80cca590859647/moleculekit-0.9.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.14
2023-06-19T14:43:37,556   Found link https://files.pythonhosted.org/packages/02/6e/108b002ecb68c789d690492a02ced311cea625fdd642348e5cd75bd25fdb/moleculekit-0.9.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.15
2023-06-19T14:43:37,556   Found link https://files.pythonhosted.org/packages/62/51/f195a9d66dab99b8f6bd30fe5f65f63c65e65ded97c8fd20bf0cda822ee1/moleculekit-0.10.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.10.0
2023-06-19T14:43:37,556   Found link https://files.pythonhosted.org/packages/19/73/98bfd38e7d5823dc1d21ca3557d9f599b09926d252b22e215688677fe1eb/moleculekit-1.0.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.0
2023-06-19T14:43:37,557   Found link https://files.pythonhosted.org/packages/fc/d7/f3aa2dd40f165c1b67401587414deb33e80764835dfe2abb16b9b1d167bf/moleculekit-1.0.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.1
2023-06-19T14:43:37,557   Found link https://files.pythonhosted.org/packages/19/54/5ec72761331cfeea3e48a65f0dc30f7c21ec586f6d2b904339c262abafd8/moleculekit-1.0.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.2
2023-06-19T14:43:37,557   Found link https://files.pythonhosted.org/packages/f9/12/d8febc3aa79b72ffa0ea8efb978370f58db848fba030df47ae546bccb298/moleculekit-1.0.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.3
2023-06-19T14:43:37,558   Found link https://files.pythonhosted.org/packages/07/ab/e6c8a654329cb5fc7cf2d91d47934a6f53ec8b34276e96128f9961147a6a/moleculekit-1.0.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.4
2023-06-19T14:43:37,558   Found link https://files.pythonhosted.org/packages/d3/02/1e965b08593af843878d5bc3f7cc49cf61d4c9ca3a1e07e796923fbdb65e/moleculekit-1.0.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.5
2023-06-19T14:43:37,558   Found link https://files.pythonhosted.org/packages/28/2f/61d6e171e7b0309a94b3920b2743e5b6990d24a4870a5b1caf39f0e34338/moleculekit-1.0.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.6
2023-06-19T14:43:37,558   Found link https://files.pythonhosted.org/packages/6d/1e/bbd2d882b353e673f44897179ab0b6e76df9c2a657d25d47090dbdce76d3/moleculekit-1.0.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.7
2023-06-19T14:43:37,559   Found link https://files.pythonhosted.org/packages/61/45/acbe2272378c87f0796b1ebcba0673a13acc5ed87eb0d29fa16e1bfe54cf/moleculekit-1.0.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.8
2023-06-19T14:43:37,559   Found link https://files.pythonhosted.org/packages/72/48/3df4bcf3a3e5ca9c0e05e5486c0a7da3b7d6b3ff49830d473b6e72f02443/moleculekit-1.0.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.9
2023-06-19T14:43:37,559   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
2023-06-19T14:43:37,559   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
2023-06-19T14:43:37,560   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2023-06-19T14:43:37,560   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
2023-06-19T14:43:37,560   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2023-06-19T14:43:37,560   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2023-06-19T14:43:37,561   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-06-19T14:43:37,561   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-06-19T14:43:37,561   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-06-19T14:43:37,562   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2023-06-19T14:43:37,562   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2023-06-19T14:43:37,562   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2023-06-19T14:43:37,562   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2023-06-19T14:43:37,563   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-06-19T14:43:37,563   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-06-19T14:43:37,563   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-06-19T14:43:37,563   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2023-06-19T14:43:37,564   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
2023-06-19T14:43:37,564   Found link https://files.pythonhosted.org/packages/f9/f6/5808fddfaeeb3c021514c45f1b896329245c2e1c6218a86b9bc9f1904d7d/moleculekit-1.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.3
2023-06-19T14:43:37,564   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
2023-06-19T14:43:37,564   Found link https://files.pythonhosted.org/packages/0b/c2/d5b36c664c2d4f8736b5dbf06b05d9efeeacd4d488125c8feb0e4efb3594/moleculekit-1.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.5
2023-06-19T14:43:37,565   Found link https://files.pythonhosted.org/packages/30/3d/7f0577f2f4fd87df9160c6c80c49fe7d025f40b9f25c6b6d9ed0bcd2341f/moleculekit-1.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.7
2023-06-19T14:43:37,565   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2023-06-19T14:43:37,565   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2023-06-19T14:43:37,565   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2023-06-19T14:43:37,566   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
2023-06-19T14:43:37,566   Found link https://files.pythonhosted.org/packages/21/ce/d98ddf9106565632f876b1b853bb23c64534e65884b9d3d73208c7fe17e6/moleculekit-1.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.2
2023-06-19T14:43:37,566   Found link https://files.pythonhosted.org/packages/f9/12/68450058da1b4f39328ce41f22cfb5a38717147b3e624cb76b225318dd96/moleculekit-1.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.3
2023-06-19T14:43:37,566   Found link https://files.pythonhosted.org/packages/a1/9c/61a877e38393372a16746096dc836e3a24d0fe31240644258396f6ec1dd5/moleculekit-1.4.5-1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.5-1
2023-06-19T14:43:37,567   Found link https://files.pythonhosted.org/packages/65/2b/f8fbac2b196d899066e4d26b78e62adc1f2356734b3de63da153e9b18e44/moleculekit-1.4.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.6
2023-06-19T14:43:37,567   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
2023-06-19T14:43:37,568   Found link https://files.pythonhosted.org/packages/91/bd/4e692bc271e6a957732a20347e43f0388e12ab60df6717a178b628f18fce/moleculekit-1.4.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.8
2023-06-19T14:43:37,569   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2023-06-19T14:43:37,569   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2023-06-19T14:43:37,570   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
2023-06-19T14:43:37,570   Found link https://files.pythonhosted.org/packages/3d/18/e249854f20e449b9890eca08ef37ccdb87f719b6ac0db8e9d2ca9c4eb890/moleculekit-1.5.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.2
2023-06-19T14:43:37,571   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2023-06-19T14:43:37,571   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2023-06-19T14:43:37,572   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2023-06-19T14:43:37,572   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2023-06-19T14:43:37,573   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
2023-06-19T14:43:37,573   Found link https://files.pythonhosted.org/packages/5e/4a/8e20ee9556cfcdc8c51aac44a054b76db1b9abf8c83124f51521397f7673/moleculekit-1.5.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.8
2023-06-19T14:43:37,574   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
2023-06-19T14:43:37,574   Found link https://files.pythonhosted.org/packages/c2/66/b802cbaa73639d3fb24d7aca0a21b932bd6b781103c3aa0662fd27dd64e0/moleculekit-1.6.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.1
2023-06-19T14:43:37,575   Found link https://files.pythonhosted.org/packages/01/31/1debf4b7c89e0060dc1f7d19ab348e627b9183890a8e443c1ee54ee3bd6c/moleculekit-1.6.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.4
2023-06-19T14:43:37,576   Found link https://files.pythonhosted.org/packages/d6/3a/77427acaba2c2b4670a4b94ce5cd161b60ac547e812a6337374265f3272d/moleculekit-1.6.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.5
2023-06-19T14:43:37,576   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
2023-06-19T14:43:37,577   Found link https://files.pythonhosted.org/packages/b0/eb/47f199ab494f4a3929e1265222e24dcfce4dc2dde54923d1be8e513bf765/moleculekit-1.6.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.7
2023-06-19T14:43:37,577   Found link https://files.pythonhosted.org/packages/02/62/8710bf8c331f6c5d3320bcd99ce1f53fd72c8ed39767e69fe09127926c58/moleculekit-1.6.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.8
2023-06-19T14:43:37,578   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
2023-06-19T14:43:37,578   Found link https://files.pythonhosted.org/packages/3d/e9/5d17d4e81b5894b9ace33d43b373881813b8a68b0a1365d7590990c5c370/moleculekit-1.7.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.0
2023-06-19T14:43:37,579   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2023-06-19T14:43:37,579   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-06-19T14:43:37,580 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-06-19T14:43:37,580 Getting page https://www.piwheels.org/simple/moleculekit/
2023-06-19T14:43:37,581 Found index url https://www.piwheels.org/simple/
2023-06-19T14:43:37,748 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
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2023-06-19T14:43:37,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.7-cp39-cp39-linux_armv7l.whl#sha256=784b935ce724662b865807e16e6006c53548f55ba4e2832c419943d22a22a63b (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-06-19T14:43:37,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.5-cp39-cp39-linux_armv6l.whl#sha256=fcac9ef91095d0a7d660dd126ceb19282bfb11fa015d6e8cb3c9da09e65ffc21 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-06-19T14:43:37,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.4-cp39-cp39-linux_armv7l.whl#sha256=1fc4c6ec32c23ebee660588de417f646cbfb358d0999778e2b3c0aa53708a6db (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-06-19T14:43:37,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.4-cp39-cp39-linux_armv6l.whl#sha256=1fc4c6ec32c23ebee660588de417f646cbfb358d0999778e2b3c0aa53708a6db (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-06-19T14:43:37,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.3-cp39-cp39-linux_armv6l.whl#sha256=a58a8161291ef6053c2da61de41173f39fae373796d435240cdb0916e437856b (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-06-19T14:43:37,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.9-cp39-cp39-linux_armv7l.whl#sha256=e8ded20037d22ac419d05d0a80db0081999eac7f92084cd85a24aef997eb56cd (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-06-19T14:43:37,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.9-cp39-cp39-linux_armv6l.whl#sha256=e8ded20037d22ac419d05d0a80db0081999eac7f92084cd85a24aef997eb56cd (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-06-19T14:43:37,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.8-cp39-cp39-linux_armv7l.whl#sha256=04b80834389619f511934db60c45649252288c6a8320edfb0b3e7b2bda32ee5b (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-06-19T14:43:37,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.6-cp39-cp39-linux_armv7l.whl#sha256=c81af8eb30e31f41a57d6e31c2e4d4a5a6f85041fe9f79dcd843adf62c919a7a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-06-19T14:43:37,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv6l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,827   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv6l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,828   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv7l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,828   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.3-py3-none-any.whl#sha256=60b48ad38d8567be173c2a4a384dd7d742cf0b9f80eac5510c5987a9e1b668b6 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,828   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.8-py3-none-any.whl#sha256=9f728761688514ebb5e7fbd00f93960d862d928411f697f3beaf5c05b55bcd29 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,829   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.6-py3-none-any.whl#sha256=aa0c660454f157d45a5709a2fe3ec7e6c79af7be1dc5866ab3497475f2197d8d (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,829   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.4-py3-none-any.whl#sha256=a5284594c607376665fb0592efa0f7696a9d1b437641b385a939bb6e171e5b58 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,830   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.3-py3-none-any.whl#sha256=c7787bffc57340080dbc84bbc30cf3adbec8c10947b34a038b821fd98f93e138 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,830   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.0-py3-none-any.whl#sha256=864f229abf24e864927569f3a17c74c39b977d8b7ba63cf2792e71f2c925eebd (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,830   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.9-py3-none-any.whl#sha256=76a22c44b710351a9d3c94d7e7c1d96c61e90251004b2a34cdcc92280d423a09 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,830   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.8-py3-none-any.whl#sha256=6bb04aee6023e232156e64c6b7dc4510dc0dd6ccc5a0ff5150e2de459d264da4 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,831   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.7-py3-none-any.whl#sha256=ff4f13b39afd18f94633a4d933baf6fee5e9836a09d545b8bcca21de12600b24 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,831   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.6-py3-none-any.whl#sha256=1642c66ce5ad47055acb7eaa76a2c208cf2e5b69c53ba3d24e4b79ebe27dc84d (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,832   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.2-py3-none-any.whl#sha256=70e4609cb3c674eb4fe10a08e84363015b5902e945d850197ef2b13b7cbfe4e0 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,832   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.1-py3-none-any.whl#sha256=4acefb42cd0b68d4405939bcd59aeb1210f253bbe06edd690250b8a74ef44745 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,832   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.32-py3-none-any.whl#sha256=7ed0aed2d398d06856936c77943277e58b3c5ec588e619d1bd18e433bfec7564 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,832   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.31-py3-none-any.whl#sha256=af99e15f25bf5959a538b538677dec0e483d524f6ae9698b92885f3667b8a5c9 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,833   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.27-py3-none-any.whl#sha256=fc3413a0265ea20a77f4167b72a3c80b8b45f7338a57d1f999fba81a45110a38 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,833   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.26-py3-none-any.whl#sha256=fe35ec2f09b9b40631f7b47c1fe463b18166a272776c4c4f839718c50fd62e14 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,833   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.24-py3-none-any.whl#sha256=13d00e3b7c8c41bc82131fa7f6df5c575b3ed0efc89b715f8ee35bb68dbe1b68 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,833   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.23-py3-none-any.whl#sha256=a174c23806ee69677ad74cd6376e8a22f000abcd5817ae7bd67ec2639d750a72 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,834   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.22-py3-none-any.whl#sha256=4bdcc64f301cdd7a24c6f2b0d515152bbde40124568d72b2046003aba6d7d34c (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,834   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.21-py3-none-any.whl#sha256=3f591427a4c43521256cd46422de7c64268ec392e356b7ff3dbb8c0bc5e0c686 (from https://www.piwheels.org/simple/moleculekit/)
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2023-06-19T14:43:37,834   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.17-py3-none-any.whl#sha256=cd99998c6c3ee48df7148cec7161f3696beede842d4e93bb9da19fa9e2c6c459 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,834   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.16-py3-none-any.whl#sha256=8045990a2fc7c805a4ab8244abe9eae67ac92495cbce12f1c9e8b0daa26a77b1 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,834   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.15-py3-none-any.whl#sha256=4db5d8b5350b36ce41d225c471f0fdd64f708826935ac50675fb278c00275339 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.14-py3-none-any.whl#sha256=051435884ce3f924fc9ba4dcb342a0d0ac85ff52bda6e656389f9a6f7eefec84 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.12-py3-none-any.whl#sha256=8d96fbe0cf32ec0d217201a2f3274aedc42fb18f06b218394d4be0bfee25181a (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.9-py3-none-any.whl#sha256=f91729081bef559daf39b7eecfd7ae81dbd90706ad12061dc95146e3737a7385 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.8-py3-none-any.whl#sha256=716d25ae18a4a9a3c8cfb1f0b0399f72463490e4f85a66631f3e77c0ddc427e3 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.7-py3-none-any.whl#sha256=899ef09b80e1ad2e3931cb2023fae09cfeecd45b83fade6c8e8739126ca67a20 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,836   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.6-py3-none-any.whl#sha256=0a288cd1efd660482dcc967caed02315dd8f02c19a0287eee0b8519d761db1b3 (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,836   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,836   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2023-06-19T14:43:37,836 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-06-19T14:43:37,836 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-06-19T14:43:37,874 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-06-19T14:43:37,894 Collecting moleculekit==1.7.2
2023-06-19T14:43:37,896   Created temporary directory: /tmp/pip-unpack-ly57frvd
2023-06-19T14:43:38,038   Downloading moleculekit-1.7.2.tar.gz (5.8 MB)
2023-06-19T14:43:40,636   Added moleculekit==1.7.2 from https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz to build tracker '/tmp/pip-build-tracker-bxwykn2i'
2023-06-19T14:43:40,645   Created temporary directory: /tmp/pip-build-env-3iy0iu5j
2023-06-19T14:43:40,654   Installing build dependencies: started
2023-06-19T14:43:40,655   Running command pip subprocess to install build dependencies
2023-06-19T14:43:41,810   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-06-19T14:43:42,179   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-19T14:43:43,848   Collecting setuptools
2023-06-19T14:43:43,942     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.8.0-py3-none-any.whl (1.1 MB)
2023-06-19T14:43:45,233   Collecting numpy>=1.18.5
2023-06-19T14:43:46,142     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.0-cp39-cp39-linux_armv7l.whl (12.5 MB)
2023-06-19T14:43:47,952   Collecting Cython>=0.29.21
2023-06-19T14:43:48,326     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.35-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-06-19T14:43:48,535   Collecting toml
2023-06-19T14:43:48,553     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-06-19T14:43:48,733   Collecting versioneer[toml]==0.28
2023-06-19T14:43:48,751     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-06-19T14:43:48,879   Collecting tomli (from versioneer[toml]==0.28)
2023-06-19T14:43:48,895     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-06-19T14:43:50,777   Installing collected packages: versioneer, tomli, toml, setuptools, numpy, Cython
2023-06-19T14:43:50,814     Creating /tmp/pip-build-env-3iy0iu5j/overlay/bin
2023-06-19T14:43:50,816     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/versioneer to 755
2023-06-19T14:44:01,478     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/f2py to 755
2023-06-19T14:44:01,481     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/f2py3 to 755
2023-06-19T14:44:01,483     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/f2py3.9 to 755
2023-06-19T14:44:04,190     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/cygdb to 755
2023-06-19T14:44:04,192     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/cython to 755
2023-06-19T14:44:04,195     changing mode of /tmp/pip-build-env-3iy0iu5j/overlay/bin/cythonize to 755
2023-06-19T14:44:04,222   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2023-06-19T14:44:04,222   scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.0 which is incompatible.
2023-06-19T14:44:04,222   Successfully installed Cython-0.29.35 numpy-1.25.0 setuptools-67.8.0 toml-0.10.2 tomli-2.0.1 versioneer-0.28
2023-06-19T14:44:04,603   Installing build dependencies: finished with status 'done'
2023-06-19T14:44:04,608   Getting requirements to build wheel: started
2023-06-19T14:44:04,609   Running command Getting requirements to build wheel
2023-06-19T14:44:48,478   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,479   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,479   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,479   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-06-19T14:44:48,480   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-06-19T14:44:48,480   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2023-06-19T14:44:48,480   [ 2/11] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2023-06-19T14:44:48,481   [ 3/11] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2023-06-19T14:44:48,481   [ 4/11] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2023-06-19T14:44:48,481   [ 5/11] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2023-06-19T14:44:48,481   [ 6/11] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2023-06-19T14:44:48,481   [ 7/11] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2023-06-19T14:44:48,481   [ 8/11] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2023-06-19T14:44:48,481   [ 9/11] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2023-06-19T14:44:48,481   [10/11] Cythonizing moleculekit/wrapping/wrapping.pyx
2023-06-19T14:44:48,481   [11/11] Cythonizing moleculekit/xtc_utils/xtc.pyx
2023-06-19T14:44:48,566   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-06-19T14:44:48,567     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-06-19T14:44:48,788   running egg_info
2023-06-19T14:44:48,794   writing moleculekit.egg-info/PKG-INFO
2023-06-19T14:44:48,797   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-06-19T14:44:48,800   writing requirements to moleculekit.egg-info/requires.txt
2023-06-19T14:44:48,801   writing top-level names to moleculekit.egg-info/top_level.txt
2023-06-19T14:44:48,831   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:48,865   reading manifest template 'MANIFEST.in'
2023-06-19T14:44:49,096   no previously-included directories found matching 'moleculekit/test-data'
2023-06-19T14:44:49,098   no previously-included directories found matching 'moleculekit/tests'
2023-06-19T14:44:49,099   no previously-included directories found matching 'package'
2023-06-19T14:44:49,100   adding license file 'LICENSE'
2023-06-19T14:44:49,117   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:49,968   Getting requirements to build wheel: finished with status 'done'
2023-06-19T14:44:49,984   Installing backend dependencies: started
2023-06-19T14:44:49,985   Running command pip subprocess to install backend dependencies
2023-06-19T14:44:51,248   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-06-19T14:44:51,658   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-19T14:44:52,100   Collecting wheel
2023-06-19T14:44:52,118     Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB)
2023-06-19T14:44:53,591   Installing collected packages: wheel
2023-06-19T14:44:53,825     Creating /tmp/pip-build-env-3iy0iu5j/normal/bin
2023-06-19T14:44:53,828     changing mode of /tmp/pip-build-env-3iy0iu5j/normal/bin/wheel to 755
2023-06-19T14:44:53,842   Successfully installed wheel-0.40.0
2023-06-19T14:44:54,057   Installing backend dependencies: finished with status 'done'
2023-06-19T14:44:54,060   Created temporary directory: /tmp/pip-modern-metadata-633_t8m8
2023-06-19T14:44:54,062   Preparing metadata (pyproject.toml): started
2023-06-19T14:44:54,063   Running command Preparing metadata (pyproject.toml)
2023-06-19T14:44:55,757   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-06-19T14:44:55,758     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-06-19T14:44:56,029   running dist_info
2023-06-19T14:44:56,030   creating /tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info
2023-06-19T14:44:56,037   writing /tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/PKG-INFO
2023-06-19T14:44:56,039   writing dependency_links to /tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/dependency_links.txt
2023-06-19T14:44:56,042   writing requirements to /tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/requires.txt
2023-06-19T14:44:56,043   writing top-level names to /tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/top_level.txt
2023-06-19T14:44:56,044   writing manifest file '/tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:56,080   reading manifest file '/tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:56,083   reading manifest template 'MANIFEST.in'
2023-06-19T14:44:56,342   no previously-included directories found matching 'moleculekit/test-data'
2023-06-19T14:44:56,343   no previously-included directories found matching 'moleculekit/tests'
2023-06-19T14:44:56,344   no previously-included directories found matching 'package'
2023-06-19T14:44:56,344   adding license file 'LICENSE'
2023-06-19T14:44:56,356   writing manifest file '/tmp/pip-modern-metadata-633_t8m8/moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:56,365   creating '/tmp/pip-modern-metadata-633_t8m8/moleculekit-1.7.2.dist-info'
2023-06-19T14:44:56,570   Preparing metadata (pyproject.toml): finished with status 'done'
2023-06-19T14:44:56,577   Source in /tmp/pip-wheel-84mfogny/moleculekit_c8fe48eb09524e24ae52c390e0de8830 has version 1.7.2, which satisfies requirement moleculekit==1.7.2 from https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz
2023-06-19T14:44:56,578   Removed moleculekit==1.7.2 from https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz from build tracker '/tmp/pip-build-tracker-bxwykn2i'
2023-06-19T14:44:56,584 Created temporary directory: /tmp/pip-unpack-4uo9lxjm
2023-06-19T14:44:56,585 Building wheels for collected packages: moleculekit
2023-06-19T14:44:56,589   Created temporary directory: /tmp/pip-wheel-pp2eyrlg
2023-06-19T14:44:56,590   Destination directory: /tmp/pip-wheel-pp2eyrlg
2023-06-19T14:44:56,592   Building wheel for moleculekit (pyproject.toml): started
2023-06-19T14:44:56,593   Running command Building wheel for moleculekit (pyproject.toml)
2023-06-19T14:44:58,162   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-06-19T14:44:58,163     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-06-19T14:44:58,413   running bdist_wheel
2023-06-19T14:44:58,429   running build
2023-06-19T14:44:58,429   running build_py
2023-06-19T14:44:58,437   creating build
2023-06-19T14:44:58,437   creating build/lib.linux-armv7l-cpython-39
2023-06-19T14:44:58,438   creating build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,439   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,441   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,443   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,445   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,447   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,448   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,450   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,452   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,454   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,455   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,458   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,460   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,462   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,464   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,466   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,471   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,472   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,476   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,478   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,480   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,482   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:58,485   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-06-19T14:44:58,486   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-06-19T14:44:58,488   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-06-19T14:44:58,489   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-06-19T14:44:58,491   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-06-19T14:44:58,494   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,495   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,498   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,500   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,502   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,504   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,506   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-06-19T14:44:58,509   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-06-19T14:44:58,509   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-06-19T14:44:58,512   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-06-19T14:44:58,512   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-06-19T14:44:58,515   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-06-19T14:44:58,518   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,519   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,522   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,524   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,527   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,529   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,532   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,535   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,537   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,539   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,541   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,543   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,545   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,547   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-06-19T14:44:58,550   creating build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,551   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,553   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,555   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,557   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,560   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,562   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,564   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,567   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,569   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,572   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,575   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,576   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,578   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,580   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,583   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-06-19T14:44:58,586   creating build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-06-19T14:44:58,587   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-06-19T14:44:58,590   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-06-19T14:44:58,591   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-06-19T14:44:58,596   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-06-19T14:44:58,597   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-06-19T14:44:58,599   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-06-19T14:44:58,602   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-06-19T14:44:58,604   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-06-19T14:44:58,606   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-06-19T14:44:58,607   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-06-19T14:44:58,609   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-06-19T14:44:58,611   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-06-19T14:44:58,612   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-06-19T14:44:58,615   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-06-19T14:44:58,616   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-06-19T14:44:58,618   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-06-19T14:44:58,621   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-06-19T14:44:58,623   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-06-19T14:44:58,625   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-06-19T14:44:58,626   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-06-19T14:44:58,629   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-06-19T14:44:58,630   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-06-19T14:44:58,631   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-06-19T14:44:58,633   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-06-19T14:44:58,635   running egg_info
2023-06-19T14:44:58,641   writing moleculekit.egg-info/PKG-INFO
2023-06-19T14:44:58,643   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-06-19T14:44:58,644   writing requirements to moleculekit.egg-info/requires.txt
2023-06-19T14:44:58,646   writing top-level names to moleculekit.egg-info/top_level.txt
2023-06-19T14:44:58,665   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:58,673   reading manifest template 'MANIFEST.in'
2023-06-19T14:44:58,900   no previously-included directories found matching 'moleculekit/test-data'
2023-06-19T14:44:58,901   no previously-included directories found matching 'moleculekit/tests'
2023-06-19T14:44:58,902   no previously-included directories found matching 'package'
2023-06-19T14:44:58,902   adding license file 'LICENSE'
2023-06-19T14:44:58,919   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-06-19T14:44:58,929   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-06-19T14:44:58,929   !!

2023-06-19T14:44:58,929           ********************************************************************************
2023-06-19T14:44:58,930           ############################
2023-06-19T14:44:58,930           # Package would be ignored #
2023-06-19T14:44:58,930           ############################
2023-06-19T14:44:58,930           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-06-19T14:44:58,930           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,930           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,930           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-06-19T14:44:58,931           to the `packages` configuration field.

2023-06-19T14:44:58,931           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,931           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,931           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,931           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,931           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,932           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-06-19T14:44:58,932           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-06-19T14:44:58,932           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,932           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,932           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,932           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,933           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,933           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,933                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,933                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,933                 directory, all directories are treated like packages.
2023-06-19T14:44:58,933           ********************************************************************************

2023-06-19T14:44:58,934   !!
2023-06-19T14:44:58,934     check.warn(importable)
2023-06-19T14:44:58,934   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-06-19T14:44:58,934   !!

2023-06-19T14:44:58,934           ********************************************************************************
2023-06-19T14:44:58,935           ############################
2023-06-19T14:44:58,935           # Package would be ignored #
2023-06-19T14:44:58,935           ############################
2023-06-19T14:44:58,935           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-06-19T14:44:58,935           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,935           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,935           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-06-19T14:44:58,935           to the `packages` configuration field.

2023-06-19T14:44:58,936           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,936           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,936           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,936           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,936           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,937           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-06-19T14:44:58,937           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-06-19T14:44:58,937           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,937           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,937           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,937           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,937           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,938           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,938                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,938                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,938                 directory, all directories are treated like packages.
2023-06-19T14:44:58,938           ********************************************************************************

2023-06-19T14:44:58,939   !!
2023-06-19T14:44:58,939     check.warn(importable)
2023-06-19T14:44:58,939   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-06-19T14:44:58,939   !!

2023-06-19T14:44:58,939           ********************************************************************************
2023-06-19T14:44:58,939           ############################
2023-06-19T14:44:58,939           # Package would be ignored #
2023-06-19T14:44:58,940           ############################
2023-06-19T14:44:58,940           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-06-19T14:44:58,940           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,940           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,940           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-06-19T14:44:58,940           to the `packages` configuration field.

2023-06-19T14:44:58,940           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,941           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,941           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,941           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,941           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,941           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-06-19T14:44:58,942           already explicitly excluding 'moleculekit.distance_utils' via
2023-06-19T14:44:58,942           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,942           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,942           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,942           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,942           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,943           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,943                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,943                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,943                 directory, all directories are treated like packages.
2023-06-19T14:44:58,943           ********************************************************************************

2023-06-19T14:44:58,943   !!
2023-06-19T14:44:58,943     check.warn(importable)
2023-06-19T14:44:58,944   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-06-19T14:44:58,944   !!

2023-06-19T14:44:58,944           ********************************************************************************
2023-06-19T14:44:58,944           ############################
2023-06-19T14:44:58,944           # Package would be ignored #
2023-06-19T14:44:58,944           ############################
2023-06-19T14:44:58,944           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-06-19T14:44:58,944           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,945           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,945           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-06-19T14:44:58,945           to the `packages` configuration field.

2023-06-19T14:44:58,945           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,945           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,945           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,946           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,946           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,946           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-06-19T14:44:58,946           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-06-19T14:44:58,946           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,946           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,947           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,947           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,947           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,947           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,947                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,948                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,948                 directory, all directories are treated like packages.
2023-06-19T14:44:58,948           ********************************************************************************

2023-06-19T14:44:58,948   !!
2023-06-19T14:44:58,948     check.warn(importable)
2023-06-19T14:44:58,948   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-06-19T14:44:58,948   !!

2023-06-19T14:44:58,949           ********************************************************************************
2023-06-19T14:44:58,949           ############################
2023-06-19T14:44:58,949           # Package would be ignored #
2023-06-19T14:44:58,949           ############################
2023-06-19T14:44:58,949           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-06-19T14:44:58,949           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,949           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,949           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-06-19T14:44:58,950           to the `packages` configuration field.

2023-06-19T14:44:58,950           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,950           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,950           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,950           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,950           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,951           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-06-19T14:44:58,951           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-06-19T14:44:58,951           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,951           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,951           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,951           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,952           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,952           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,952                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,952                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,952                 directory, all directories are treated like packages.
2023-06-19T14:44:58,952           ********************************************************************************

2023-06-19T14:44:58,953   !!
2023-06-19T14:44:58,953     check.warn(importable)
2023-06-19T14:44:58,953   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-06-19T14:44:58,953   !!

2023-06-19T14:44:58,953           ********************************************************************************
2023-06-19T14:44:58,953           ############################
2023-06-19T14:44:58,953           # Package would be ignored #
2023-06-19T14:44:58,954           ############################
2023-06-19T14:44:58,954           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-06-19T14:44:58,954           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,954           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,954           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-06-19T14:44:58,954           to the `packages` configuration field.

2023-06-19T14:44:58,955           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,955           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,955           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,955           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,955           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,956           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-06-19T14:44:58,956           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-06-19T14:44:58,956           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,956           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,956           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,956           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,956           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,957           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,957                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,957                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,957                 directory, all directories are treated like packages.
2023-06-19T14:44:58,957           ********************************************************************************

2023-06-19T14:44:58,957   !!
2023-06-19T14:44:58,958     check.warn(importable)
2023-06-19T14:44:58,958   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-06-19T14:44:58,958   !!

2023-06-19T14:44:58,958           ********************************************************************************
2023-06-19T14:44:58,958           ############################
2023-06-19T14:44:58,958           # Package would be ignored #
2023-06-19T14:44:58,958           ############################
2023-06-19T14:44:58,958           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-06-19T14:44:58,958           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,959           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,959           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-06-19T14:44:58,959           to the `packages` configuration field.

2023-06-19T14:44:58,959           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,959           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,959           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,960           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,960           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,960           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-06-19T14:44:58,960           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-06-19T14:44:58,960           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,960           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,960           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,961           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,961           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,961           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,961                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,961                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,961                 directory, all directories are treated like packages.
2023-06-19T14:44:58,962           ********************************************************************************

2023-06-19T14:44:58,962   !!
2023-06-19T14:44:58,962     check.warn(importable)
2023-06-19T14:44:58,962   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-06-19T14:44:58,962   !!

2023-06-19T14:44:58,962           ********************************************************************************
2023-06-19T14:44:58,962           ############################
2023-06-19T14:44:58,963           # Package would be ignored #
2023-06-19T14:44:58,963           ############################
2023-06-19T14:44:58,963           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-06-19T14:44:58,963           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,963           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,963           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-06-19T14:44:58,963           to the `packages` configuration field.

2023-06-19T14:44:58,964           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,964           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,964           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,964           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,964           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,964           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-06-19T14:44:58,965           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-06-19T14:44:58,965           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,965           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,965           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,965           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,965           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,966           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,966                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,966                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,966                 directory, all directories are treated like packages.
2023-06-19T14:44:58,966           ********************************************************************************

2023-06-19T14:44:58,966   !!
2023-06-19T14:44:58,966     check.warn(importable)
2023-06-19T14:44:58,966   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-06-19T14:44:58,967   !!

2023-06-19T14:44:58,967           ********************************************************************************
2023-06-19T14:44:58,967           ############################
2023-06-19T14:44:58,967           # Package would be ignored #
2023-06-19T14:44:58,967           ############################
2023-06-19T14:44:58,967           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-06-19T14:44:58,967           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,968           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,968           package, please make sure that 'moleculekit.share' is explicitly added
2023-06-19T14:44:58,968           to the `packages` configuration field.

2023-06-19T14:44:58,968           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,968           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,968           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,968           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,969           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,969           If you don't want 'moleculekit.share' to be distributed and are
2023-06-19T14:44:58,969           already explicitly excluding 'moleculekit.share' via
2023-06-19T14:44:58,969           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,969           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,969           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,970           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,970           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,970           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,971                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,971                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,971                 directory, all directories are treated like packages.
2023-06-19T14:44:58,971           ********************************************************************************

2023-06-19T14:44:58,971   !!
2023-06-19T14:44:58,971     check.warn(importable)
2023-06-19T14:44:58,971   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-06-19T14:44:58,972   !!

2023-06-19T14:44:58,972           ********************************************************************************
2023-06-19T14:44:58,972           ############################
2023-06-19T14:44:58,972           # Package would be ignored #
2023-06-19T14:44:58,972           ############################
2023-06-19T14:44:58,972           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-06-19T14:44:58,973           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,973           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,973           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-06-19T14:44:58,973           to the `packages` configuration field.

2023-06-19T14:44:58,973           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,973           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,974           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,974           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,974           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,974           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-06-19T14:44:58,974           already explicitly excluding 'moleculekit.share.atomselect' via
2023-06-19T14:44:58,975           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,975           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,975           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,975           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,975           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,976           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,976                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,976                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,976                 directory, all directories are treated like packages.
2023-06-19T14:44:58,976           ********************************************************************************

2023-06-19T14:44:58,976   !!
2023-06-19T14:44:58,977     check.warn(importable)
2023-06-19T14:44:58,977   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-06-19T14:44:58,977   !!

2023-06-19T14:44:58,977           ********************************************************************************
2023-06-19T14:44:58,977           ############################
2023-06-19T14:44:58,977           # Package would be ignored #
2023-06-19T14:44:58,977           ############################
2023-06-19T14:44:58,978           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-06-19T14:44:58,978           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,978           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,978           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-06-19T14:44:58,978           to the `packages` configuration field.

2023-06-19T14:44:58,978           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,978           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,979           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,979           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,979           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,979           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-06-19T14:44:58,979           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-06-19T14:44:58,979           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,980           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,980           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,980           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,980           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,980           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,981                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,981                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,981                 directory, all directories are treated like packages.
2023-06-19T14:44:58,981           ********************************************************************************

2023-06-19T14:44:58,981   !!
2023-06-19T14:44:58,981     check.warn(importable)
2023-06-19T14:44:58,981   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-06-19T14:44:58,982   !!

2023-06-19T14:44:58,982           ********************************************************************************
2023-06-19T14:44:58,982           ############################
2023-06-19T14:44:58,982           # Package would be ignored #
2023-06-19T14:44:58,982           ############################
2023-06-19T14:44:58,982           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-06-19T14:44:58,982           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,983           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,983           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-06-19T14:44:58,983           to the `packages` configuration field.

2023-06-19T14:44:58,983           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,983           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,984           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,984           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,984           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,984           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-06-19T14:44:58,984           already explicitly excluding 'moleculekit.tmalign' via
2023-06-19T14:44:58,985           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,985           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,985           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,985           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,985           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,986           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,986                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,986                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,986                 directory, all directories are treated like packages.
2023-06-19T14:44:58,986           ********************************************************************************

2023-06-19T14:44:58,987   !!
2023-06-19T14:44:58,987     check.warn(importable)
2023-06-19T14:44:58,987   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-06-19T14:44:58,987   !!

2023-06-19T14:44:58,987           ********************************************************************************
2023-06-19T14:44:58,987           ############################
2023-06-19T14:44:58,987           # Package would be ignored #
2023-06-19T14:44:58,988           ############################
2023-06-19T14:44:58,988           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-06-19T14:44:58,988           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,988           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,988           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-06-19T14:44:58,988           to the `packages` configuration field.

2023-06-19T14:44:58,989           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,989           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,989           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,989           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,989           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,990           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-06-19T14:44:58,990           already explicitly excluding 'moleculekit.tmalign.include' via
2023-06-19T14:44:58,990           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,990           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,990           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,991           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,991           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,991           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,991                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,992                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,992                 directory, all directories are treated like packages.
2023-06-19T14:44:58,992           ********************************************************************************

2023-06-19T14:44:58,992   !!
2023-06-19T14:44:58,992     check.warn(importable)
2023-06-19T14:44:58,992   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-06-19T14:44:58,993   !!

2023-06-19T14:44:58,993           ********************************************************************************
2023-06-19T14:44:58,993           ############################
2023-06-19T14:44:58,993           # Package would be ignored #
2023-06-19T14:44:58,993           ############################
2023-06-19T14:44:58,993           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-06-19T14:44:58,993           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,994           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,994           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-06-19T14:44:58,994           to the `packages` configuration field.

2023-06-19T14:44:58,994           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:58,994           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:58,995           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:58,995           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:58,995           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:58,995           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-06-19T14:44:58,995           already explicitly excluding 'moleculekit.tmalign.src' via
2023-06-19T14:44:58,996           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:58,996           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:58,996           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:58,996           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:58,996           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:58,997           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:58,997                 even if it does not contain any `.py` files.
2023-06-19T14:44:58,997                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:58,997                 directory, all directories are treated like packages.
2023-06-19T14:44:58,997           ********************************************************************************

2023-06-19T14:44:58,998   !!
2023-06-19T14:44:58,998     check.warn(importable)
2023-06-19T14:44:58,998   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-06-19T14:44:58,998   !!

2023-06-19T14:44:58,998           ********************************************************************************
2023-06-19T14:44:58,998           ############################
2023-06-19T14:44:58,998           # Package would be ignored #
2023-06-19T14:44:58,999           ############################
2023-06-19T14:44:58,999           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-06-19T14:44:58,999           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:58,999           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:58,999           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-06-19T14:44:58,999           to the `packages` configuration field.

2023-06-19T14:44:59,000           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:59,000           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:59,000           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:59,000           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:59,000           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:59,001           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-06-19T14:44:59,001           already explicitly excluding 'moleculekit.wrapping' via
2023-06-19T14:44:59,001           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:59,001           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:59,001           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:59,001           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:59,002           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:59,002           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:59,002                 even if it does not contain any `.py` files.
2023-06-19T14:44:59,002                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:59,003                 directory, all directories are treated like packages.
2023-06-19T14:44:59,003           ********************************************************************************

2023-06-19T14:44:59,003   !!
2023-06-19T14:44:59,003     check.warn(importable)
2023-06-19T14:44:59,003   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-06-19T14:44:59,003   !!

2023-06-19T14:44:59,004           ********************************************************************************
2023-06-19T14:44:59,004           ############################
2023-06-19T14:44:59,004           # Package would be ignored #
2023-06-19T14:44:59,004           ############################
2023-06-19T14:44:59,004           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-06-19T14:44:59,004           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:59,004           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:59,005           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-06-19T14:44:59,005           to the `packages` configuration field.

2023-06-19T14:44:59,005           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:59,005           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:59,005           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:59,005           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:59,006           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:59,006           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-06-19T14:44:59,006           already explicitly excluding 'moleculekit.xtc_utils' via
2023-06-19T14:44:59,006           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:59,006           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:59,006           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:59,007           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:59,007           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:59,007           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:59,007                 even if it does not contain any `.py` files.
2023-06-19T14:44:59,008                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:59,008                 directory, all directories are treated like packages.
2023-06-19T14:44:59,008           ********************************************************************************

2023-06-19T14:44:59,008   !!
2023-06-19T14:44:59,008     check.warn(importable)
2023-06-19T14:44:59,008   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-06-19T14:44:59,008   !!

2023-06-19T14:44:59,009           ********************************************************************************
2023-06-19T14:44:59,009           ############################
2023-06-19T14:44:59,009           # Package would be ignored #
2023-06-19T14:44:59,009           ############################
2023-06-19T14:44:59,009           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-06-19T14:44:59,009           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:59,009           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:59,010           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-06-19T14:44:59,010           to the `packages` configuration field.

2023-06-19T14:44:59,010           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:59,010           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:59,010           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:59,010           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:59,011           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:59,011           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-06-19T14:44:59,011           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-06-19T14:44:59,011           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:59,011           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:59,012           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:59,012           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:59,012           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:59,012           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:59,012                 even if it does not contain any `.py` files.
2023-06-19T14:44:59,013                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:59,013                 directory, all directories are treated like packages.
2023-06-19T14:44:59,013           ********************************************************************************

2023-06-19T14:44:59,013   !!
2023-06-19T14:44:59,013     check.warn(importable)
2023-06-19T14:44:59,013   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-06-19T14:44:59,013   !!

2023-06-19T14:44:59,014           ********************************************************************************
2023-06-19T14:44:59,014           ############################
2023-06-19T14:44:59,014           # Package would be ignored #
2023-06-19T14:44:59,014           ############################
2023-06-19T14:44:59,014           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-06-19T14:44:59,014           but it is absent from setuptools' `packages` configuration.

2023-06-19T14:44:59,014           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-19T14:44:59,015           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-06-19T14:44:59,015           to the `packages` configuration field.

2023-06-19T14:44:59,015           Alternatively, you can also rely on setuptools' discovery methods
2023-06-19T14:44:59,015           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-19T14:44:59,015           instead of `find_packages(...)`/`find:`).

2023-06-19T14:44:59,015           You can read more about "package discovery" on setuptools documentation page:

2023-06-19T14:44:59,016           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-19T14:44:59,016           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-06-19T14:44:59,016           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-06-19T14:44:59,016           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-19T14:44:59,016           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-19T14:44:59,017           combination with a more fine grained `package-data` configuration.

2023-06-19T14:44:59,017           You can read more about "package data files" on setuptools documentation page:

2023-06-19T14:44:59,017           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-19T14:44:59,017           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-19T14:44:59,018                 even if it does not contain any `.py` files.
2023-06-19T14:44:59,018                 On the other hand, currently there is no concept of package data
2023-06-19T14:44:59,018                 directory, all directories are treated like packages.
2023-06-19T14:44:59,018           ********************************************************************************

2023-06-19T14:44:59,018   !!
2023-06-19T14:44:59,018     check.warn(importable)
2023-06-19T14:44:59,018   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:59,019   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:59,019   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-06-19T14:44:59,019   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-06-19T14:44:59,019   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-06-19T14:44:59,019   creating build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-06-19T14:44:59,019   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-06-19T14:44:59,033   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-06-19T14:44:59,035   creating build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-06-19T14:44:59,036   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-06-19T14:44:59,064   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-06-19T14:44:59,066   creating build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-06-19T14:44:59,067   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-06-19T14:44:59,088   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-06-19T14:44:59,090   creating build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-06-19T14:44:59,091   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-06-19T14:44:59,093   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-06-19T14:44:59,095   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-06-19T14:44:59,296   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-06-19T14:44:59,297   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-06-19T14:44:59,299   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr
2023-06-19T14:44:59,299   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,300   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,302   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,304   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,306   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,308   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,310   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,312   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,314   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,316   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,318   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,320   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,322   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,324   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,327   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,329   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,331   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,333   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,335   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,337   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,340   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,342   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,344   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,346   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,348   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,350   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,353   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,355   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,357   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,359   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,361   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,363   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,365   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,367   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,370   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,372   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,374   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,376   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,378   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,380   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,382   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,384   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,386   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,388   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,390   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,392   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,394   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,396   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,398   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,400   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,403   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,405   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,407   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,409   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,411   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,413   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,415   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,417   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,419   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,421   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,423   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,425   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,427   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,429   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,431   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,433   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,435   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,437   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,439   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,441   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,443   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,445   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,447   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,449   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,451   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,453   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,455   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,457   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,459   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,461   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,463   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,466   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,468   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,470   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,472   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,474   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,476   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,478   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,480   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,482   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,484   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,486   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,488   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,490   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,492   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,494   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,497   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,498   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,501   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,503   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,505   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,507   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,509   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,510   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,513   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,515   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,517   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,519   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,521   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,523   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,525   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,527   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,529   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,531   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,533   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,535   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,538   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,540   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,542   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,544   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,546   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,548   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,550   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,552   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,555   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,557   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,559   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,561   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,563   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,565   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,567   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,569   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,571   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,574   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,576   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,578   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,580   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,582   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,584   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,586   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,588   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,590   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,592   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,595   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,597   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,599   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,601   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,603   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,605   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,607   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,609   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,611   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,613   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,615   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,618   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,620   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,622   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,624   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,626   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,628   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,631   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,633   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,635   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,637   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,639   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,641   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,643   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,645   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,647   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,649   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,651   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,653   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,655   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,657   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,659   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,661   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-06-19T14:44:59,663   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-06-19T14:44:59,664   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-06-19T14:44:59,692   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-06-19T14:44:59,695   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-06-19T14:44:59,697   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-06-19T14:44:59,698   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-06-19T14:44:59,700   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-06-19T14:44:59,701   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-06-19T14:44:59,708   creating build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-06-19T14:44:59,709   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-06-19T14:44:59,725   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-06-19T14:44:59,727   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-06-19T14:44:59,728   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-06-19T14:44:59,744   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-06-19T14:44:59,746   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-06-19T14:44:59,748   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-06-19T14:44:59,749   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-06-19T14:44:59,752   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-06-19T14:44:59,754   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-06-19T14:44:59,756   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-06-19T14:44:59,757   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-06-19T14:44:59,761   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-06-19T14:44:59,763   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-06-19T14:44:59,766   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-06-19T14:44:59,767   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-06-19T14:44:59,790   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-06-19T14:44:59,792   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-06-19T14:44:59,793   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-06-19T14:44:59,810   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-06-19T14:44:59,812   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-06-19T14:44:59,813   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-06-19T14:44:59,830   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-06-19T14:44:59,832   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-06-19T14:44:59,833   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-06-19T14:44:59,851   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-06-19T14:44:59,863   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-06-19T14:44:59,864   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.7.2'
2023-06-19T14:44:59,864   running build_ext
2023-06-19T14:44:59,874   building 'moleculekit.interactions.hbonds' extension
2023-06-19T14:44:59,875   creating build/temp.linux-armv7l-cpython-39
2023-06-19T14:44:59,876   creating build/temp.linux-armv7l-cpython-39/moleculekit
2023-06-19T14:44:59,877   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions
2023-06-19T14:44:59,878   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-06-19T14:44:59,879   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -O3
2023-06-19T14:45:00,143   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:45:00,143                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:45:00,143                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:45:00,143                    from moleculekit/interactions/hbonds/hbonds.cpp:790:
2023-06-19T14:45:00,143   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:45:00,144      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:45:00,144         |  ^~~~~~~
2023-06-19T14:45:19,183   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:45:19,493   building 'moleculekit.interactions.pipi' extension
2023-06-19T14:45:19,494   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-06-19T14:45:19,499   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -O3
2023-06-19T14:45:19,722   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:45:19,722                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:45:19,722                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:45:19,722                    from moleculekit/interactions/pipi/pipi.cpp:790:
2023-06-19T14:45:19,723   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:45:19,723      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:45:19,723         |  ^~~~~~~
2023-06-19T14:45:40,841   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:45:41,160   building 'moleculekit.interactions.cationpi' extension
2023-06-19T14:45:41,161   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-06-19T14:45:41,162   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -O3
2023-06-19T14:45:41,396   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:45:41,396                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:45:41,397                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:45:41,397                    from moleculekit/interactions/cationpi/cationpi.cpp:790:
2023-06-19T14:45:41,397   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:45:41,397      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:45:41,397         |  ^~~~~~~
2023-06-19T14:46:02,525   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:46:02,831   building 'moleculekit.interactions.sigmahole' extension
2023-06-19T14:46:02,832   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-06-19T14:46:02,833   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-06-19T14:46:03,066   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:46:03,066                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:46:03,067                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:46:03,067                    from moleculekit/interactions/sigmahole/sigmahole.cpp:790:
2023-06-19T14:46:03,067   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:46:03,067      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:46:03,067         |  ^~~~~~~
2023-06-19T14:46:23,957   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:46:24,277   building 'moleculekit.wrapping' extension
2023-06-19T14:46:24,278   creating build/temp.linux-armv7l-cpython-39/moleculekit/wrapping
2023-06-19T14:46:24,279   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -O3
2023-06-19T14:46:24,518   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:46:24,518                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:46:24,518                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:46:24,518                    from moleculekit/wrapping/wrapping.cpp:790:
2023-06-19T14:46:24,518   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:46:24,519      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:46:24,519         |  ^~~~~~~
2023-06-19T14:46:42,173   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:46:42,377   building 'moleculekit.bondguesser_utils' extension
2023-06-19T14:46:42,378   creating build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-06-19T14:46:42,379   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-06-19T14:46:42,612   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:46:42,613                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:46:42,613                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:46:42,613                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:790:
2023-06-19T14:46:42,613   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:46:42,613      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:46:42,613         |  ^~~~~~~
2023-06-19T14:46:43,782   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-06-19T14:46:43,782   moleculekit/bondguesser_utils/bondguesser_utils.cpp:2953:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-06-19T14:46:43,782    2953 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-06-19T14:46:43,782         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-06-19T14:46:43,782   moleculekit/bondguesser_utils/bondguesser_utils.cpp:2965:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-06-19T14:46:43,783    2965 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-06-19T14:46:43,783         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-06-19T14:46:43,783   moleculekit/bondguesser_utils/bondguesser_utils.cpp:2977:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-06-19T14:46:43,783    2977 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-06-19T14:46:43,783         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-06-19T14:46:43,783   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3016:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,783    3016 |         __pyx_t_12 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-06-19T14:46:43,784         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,784   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3055:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,784    3055 |         __pyx_t_12 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-06-19T14:46:43,784         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,784   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3094:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,784    3094 |         __pyx_t_12 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,785         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,785   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3133:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,785    3133 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-06-19T14:46:43,785         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,785   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3139:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,785    3139 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-06-19T14:46:43,785         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,786   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3180:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,786    3180 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-06-19T14:46:43,786         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,786   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3186:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,786    3186 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,786         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,786   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3227:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,787    3227 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-06-19T14:46:43,787         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,787   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3233:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,787    3233 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,787         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,787   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3274:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,787    3274 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-06-19T14:46:43,788         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,788   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3327:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,788    3327 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,788         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,788   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3374:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,788    3374 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,788         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,789   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3415:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,789    3415 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-06-19T14:46:43,789         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,789   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3421:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,789    3421 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-06-19T14:46:43,789         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,789   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3427:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,789    3427 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,790         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,790   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3474:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,790    3474 |         __pyx_t_13 = ((__pyx_v_yi < (__pyx_v_yboxes - 1)) != 0);
2023-06-19T14:46:43,790         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,790   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3480:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,790    3480 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,790         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,791   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3521:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,791    3521 |         __pyx_t_13 = ((__pyx_v_xi < (__pyx_v_xboxes - 1)) != 0);
2023-06-19T14:46:43,791         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,791   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3533:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,791    3533 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,791         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,792   moleculekit/bondguesser_utils/bondguesser_utils.cpp:3586:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-06-19T14:46:43,792    3586 |         __pyx_t_13 = ((__pyx_v_zi < (__pyx_v_zboxes - 1)) != 0);
2023-06-19T14:46:43,792         |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,818   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-06-19T14:46:43,819   moleculekit/bondguesser_utils/bondguesser_utils.cpp:4135:38: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-06-19T14:46:43,819    4135 |       __pyx_t_6 = ((__pyx_v_boxneigh == __pyx_v_n_boxes) != 0);
2023-06-19T14:46:43,819         |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-06-19T14:46:43,819   moleculekit/bondguesser_utils/bondguesser_utils.cpp:4172:38: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-06-19T14:46:43,819    4172 |       __pyx_t_6 = ((__pyx_v_boxneigh == __pyx_v_boxidx) != 0);
2023-06-19T14:46:43,819         |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-06-19T14:47:00,540   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:47:00,830   building 'moleculekit.atomselect_utils' extension
2023-06-19T14:47:00,831   creating build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-06-19T14:47:00,832   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-06-19T14:47:01,062   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:47:01,063                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:47:01,063                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:47:01,063                    from moleculekit/atomselect_utils/atomselect_utils.cpp:790:
2023-06-19T14:47:01,063   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:47:01,063      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:47:01,063         |  ^~~~~~~
2023-06-19T14:47:02,370   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-06-19T14:47:02,370   moleculekit/atomselect_utils/atomselect_utils.cpp:5400:162: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-06-19T14:47:02,371    5400 |       __pyx_t_3 = (((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum) != 0);
2023-06-19T14:47:02,371         |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-06-19T14:47:02,376   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-06-19T14:47:02,376   moleculekit/atomselect_utils/atomselect_utils.cpp:5654:164: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-06-19T14:47:02,377    5654 |         __pyx_t_6 = (((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i) != 0);
2023-06-19T14:47:02,377         |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-06-19T14:47:02,382   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-06-19T14:47:02,382   moleculekit/atomselect_utils/atomselect_utils.cpp:5920:164: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-06-19T14:47:02,382    5920 |         __pyx_t_6 = (((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i) != 0);
2023-06-19T14:47:02,383         |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-06-19T14:47:25,281   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:47:25,600   building 'moleculekit.distance_utils' extension
2023-06-19T14:47:25,601   creating build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-06-19T14:47:25,602   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -O3
2023-06-19T14:47:25,838   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:47:25,839                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:47:25,839                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:47:25,839                    from moleculekit/distance_utils/distance_utils.cpp:790:
2023-06-19T14:47:25,839   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:47:25,839      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:47:25,839         |  ^~~~~~~
2023-06-19T14:47:48,883   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:47:49,199   building 'moleculekit.occupancy_utils' extension
2023-06-19T14:47:49,200   creating build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-06-19T14:47:49,201   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-06-19T14:47:49,450   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:47:49,451                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:47:49,451                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:47:49,451                    from moleculekit/occupancy_utils/occupancy_utils.cpp:790:
2023-06-19T14:47:49,451   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:47:49,451      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:47:49,451         |  ^~~~~~~
2023-06-19T14:48:06,215   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:48:06,422   building 'moleculekit.xtc' extension
2023-06-19T14:48:06,423   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-06-19T14:48:06,424   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-06-19T14:48:06,425   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o
2023-06-19T14:48:06,680   moleculekit/xtc_utils/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,680      66 |  "OK",
2023-06-19T14:48:06,680         |  ^~~~
2023-06-19T14:48:06,681   moleculekit/xtc_utils/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,681      67 |  "Header",
2023-06-19T14:48:06,681         |  ^~~~~~~~
2023-06-19T14:48:06,682   moleculekit/xtc_utils/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,682      68 |  "String",
2023-06-19T14:48:06,682         |  ^~~~~~~~
2023-06-19T14:48:06,682   moleculekit/xtc_utils/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,682      69 |  "Double",
2023-06-19T14:48:06,683         |  ^~~~~~~~
2023-06-19T14:48:06,683   moleculekit/xtc_utils/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,683      70 |  "Integer",
2023-06-19T14:48:06,683         |  ^~~~~~~~~
2023-06-19T14:48:06,683   moleculekit/xtc_utils/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,684      71 |  "Float",
2023-06-19T14:48:06,684         |  ^~~~~~~
2023-06-19T14:48:06,684   moleculekit/xtc_utils/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,684      72 |  "Unsigned integer",
2023-06-19T14:48:06,684         |  ^~~~~~~~~~~~~~~~~~
2023-06-19T14:48:06,685   moleculekit/xtc_utils/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,685      73 |  "Compressed 3D coordinate",
2023-06-19T14:48:06,685         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:48:06,685   moleculekit/xtc_utils/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,686      74 |  "Closing file",
2023-06-19T14:48:06,686         |  ^~~~~~~~~~~~~~
2023-06-19T14:48:06,686   moleculekit/xtc_utils/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,686      75 |  "Magic number",
2023-06-19T14:48:06,686         |  ^~~~~~~~~~~~~~
2023-06-19T14:48:06,687   moleculekit/xtc_utils/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,687      76 |  "Not enough memory",
2023-06-19T14:48:06,687         |  ^~~~~~~~~~~~~~~~~~~
2023-06-19T14:48:06,687   moleculekit/xtc_utils/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,687      77 |  "End of file",
2023-06-19T14:48:06,688         |  ^~~~~~~~~~~~~
2023-06-19T14:48:06,688   moleculekit/xtc_utils/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-06-19T14:48:06,688      78 |  "File not found"
2023-06-19T14:48:06,688         |  ^~~~~~~~~~~~~~~~
2023-06-19T14:48:06,695   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-06-19T14:48:06,695   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,695     459 |     while (size >= num && num_of_bits < 32)
2023-06-19T14:48:06,695         |            ~~~~~^~~~~~
2023-06-19T14:48:06,696   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-06-19T14:48:06,696   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,696     505 |     while (bytes[num_of_bytes] >= num)
2023-06-19T14:48:06,697         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-06-19T14:48:06,699   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-06-19T14:48:06,700   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,700     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-06-19T14:48:06,700         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-06-19T14:48:06,700   moleculekit/xtc_utils/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,700     616 |   for (i = 0; i < num_of_bytes; i++)
2023-06-19T14:48:06,701         |               ~~^~~~~~~~~~~~~~
2023-06-19T14:48:06,701   moleculekit/xtc_utils/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,701     624 |   for (i = 0; i < num_of_bytes-1; i++)
2023-06-19T14:48:06,701         |               ~~^~~~~~~~~~~~~~~~
2023-06-19T14:48:06,702   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-06-19T14:48:06,702   moleculekit/xtc_utils/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,702     664 |   if (lastbits < num_of_bits)
2023-06-19T14:48:06,702         |       ~~~~~~~~~^~~~~~~~~~~~~
2023-06-19T14:48:06,707   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-06-19T14:48:06,707   moleculekit/xtc_utils/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,707     785 |  if(size3>xfp->buf1size)
2023-06-19T14:48:06,707         |     ~~~~~^~~~~~~~~~~~~~
2023-06-19T14:48:06,709   moleculekit/xtc_utils/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,710     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:48:06,710         |                   ^
2023-06-19T14:48:06,713   moleculekit/xtc_utils/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,714     932 |     if(countmjh >= size3 ) { return -1; }
2023-06-19T14:48:06,714         |        ~~~~~~~~~^~~~~~~~
2023-06-19T14:48:06,714   moleculekit/xtc_utils/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,714     935 |     if(countmjh >= size3 ) { return -1; }
2023-06-19T14:48:06,714         |        ~~~~~~~~~^~~~~~~~
2023-06-19T14:48:06,715   moleculekit/xtc_utils/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,715     938 |     if(countmjh >= size3 ) { return -1; }
2023-06-19T14:48:06,715         |        ~~~~~~~~~^~~~~~~~
2023-06-19T14:48:06,715   moleculekit/xtc_utils/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,715     945 |     if(countmjh >= size3 ) { return -1; }
2023-06-19T14:48:06,716         |        ~~~~~~~~~^~~~~~~~
2023-06-19T14:48:06,716   moleculekit/xtc_utils/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,716     948 |     if(countmjh >= size3 ) { return -1; }
2023-06-19T14:48:06,716         |        ~~~~~~~~~^~~~~~~~
2023-06-19T14:48:06,716   moleculekit/xtc_utils/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,717     951 |     if(countmjh >= size3 ) { return -1; }
2023-06-19T14:48:06,717         |        ~~~~~~~~~^~~~~~~~
2023-06-19T14:48:06,717   moleculekit/xtc_utils/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:48:06,717     756 |  int smallidx,  minidx, maxidx;
2023-06-19T14:48:06,717         |                 ^~~~~~
2023-06-19T14:48:06,717   moleculekit/xtc_utils/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:48:06,718     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-06-19T14:48:06,718         |                         ^~~~~~
2023-06-19T14:48:06,718   moleculekit/xtc_utils/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-06-19T14:48:06,718     763 |  int errval=1;
2023-06-19T14:48:06,718         |      ^~~~~~
2023-06-19T14:48:06,719   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-06-19T14:48:06,720   moleculekit/xtc_utils/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,720    1011 |  if(size3>xfp->buf1size)
2023-06-19T14:48:06,720         |     ~~~~~^~~~~~~~~~~~~~
2023-06-19T14:48:06,722   moleculekit/xtc_utils/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,723    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2023-06-19T14:48:06,723         |                     ~~~~~~~~^~~~~~~
2023-06-19T14:48:06,723   moleculekit/xtc_utils/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,724    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2023-06-19T14:48:06,724         |                    ~~~~~~~~^~~~~~~
2023-06-19T14:48:06,724   moleculekit/xtc_utils/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,725    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2023-06-19T14:48:06,725         |                    ~~~~~~~~^~~~~~~
2023-06-19T14:48:06,726   moleculekit/xtc_utils/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,727    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-06-19T14:48:06,727         |                  ^
2023-06-19T14:48:06,727   moleculekit/xtc_utils/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,727    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:48:06,727         |                   ^
2023-06-19T14:48:06,731   moleculekit/xtc_utils/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,731    1275 |  if(tmp==(unsigned int)buf2[0])
2023-06-19T14:48:06,731         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:48:06,731   moleculekit/xtc_utils/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:48:06,731    1001 |  int errval;
2023-06-19T14:48:06,731         |      ^~~~~~
2023-06-19T14:48:06,734   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-06-19T14:48:06,734   moleculekit/xtc_utils/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,734    1316 |  if(size3>xfp->buf1size)
2023-06-19T14:48:06,734         |     ~~~~~^~~~~~~~~~~~~~
2023-06-19T14:48:06,736   moleculekit/xtc_utils/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,736    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:48:06,736         |                   ^
2023-06-19T14:48:06,739   moleculekit/xtc_utils/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:48:06,739    1289 |  int smallidx,  maxidx, minidx;
2023-06-19T14:48:06,739         |                         ^~~~~~
2023-06-19T14:48:06,739   moleculekit/xtc_utils/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:48:06,739    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-06-19T14:48:06,739         |                         ^~~~~~
2023-06-19T14:48:06,740   moleculekit/xtc_utils/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-06-19T14:48:06,740    1297 |  int errval=1;
2023-06-19T14:48:06,740         |      ^~~~~~
2023-06-19T14:48:06,741   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-06-19T14:48:06,741   moleculekit/xtc_utils/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,741    1513 |  if(size3>xfp->buf1size) {
2023-06-19T14:48:06,741         |     ~~~~~^~~~~~~~~~~~~~
2023-06-19T14:48:06,745   moleculekit/xtc_utils/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,745    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-06-19T14:48:06,746         |                  ^
2023-06-19T14:48:06,746   moleculekit/xtc_utils/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-06-19T14:48:06,746    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-06-19T14:48:06,746         |                   ^
2023-06-19T14:48:06,750   moleculekit/xtc_utils/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-06-19T14:48:06,750    1743 |  if(tmp==(unsigned int)buf2[0])
2023-06-19T14:48:06,750         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-06-19T14:48:06,750   moleculekit/xtc_utils/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-06-19T14:48:06,751    1504 |  int errval=1;
2023-06-19T14:48:06,751         |      ^~~~~~
2023-06-19T14:48:09,006   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-06-19T14:48:09,258   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o
2023-06-19T14:48:09,827   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-06-19T14:48:09,827   moleculekit/xtc_utils/src/xtc.cpp:207:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-06-19T14:48:09,827     207 |  int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-06-19T14:48:09,827         |      ^~~
2023-06-19T14:48:09,834   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-06-19T14:48:09,834   moleculekit/xtc_utils/src/xtc.cpp:418:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-06-19T14:48:09,835     418 |  int nf3 = nframes * 3;
2023-06-19T14:48:09,835         |      ^~~
2023-06-19T14:48:09,840   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-06-19T14:48:09,840   moleculekit/xtc_utils/src/xtc.cpp:491:6: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-06-19T14:48:09,840     491 |  int reading_index = 0;
2023-06-19T14:48:09,840         |      ^~~~~~~~~~~~~
2023-06-19T14:48:09,841   moleculekit/xtc_utils/src/xtc.cpp:492:6: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-06-19T14:48:09,841     492 |  int writing_index = 0;
2023-06-19T14:48:09,841         |      ^~~~~~~~~~~~~
2023-06-19T14:48:10,599   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o
2023-06-19T14:48:10,837   In file included from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-19T14:48:10,837                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-19T14:48:10,837                    from /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-19T14:48:10,837                    from moleculekit/xtc_utils/xtc.cpp:792:
2023-06-19T14:48:10,837   /tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-19T14:48:10,838      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-19T14:48:10,838         |  ^~~~~~~
2023-06-19T14:48:25,887   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:48:26,194   building 'moleculekit.tmalign' extension
2023-06-19T14:48:26,196   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign
2023-06-19T14:48:26,196   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-06-19T14:48:26,198   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o -w
2023-06-19T14:48:55,671   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-3iy0iu5j/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -w
2023-06-19T14:49:08,135   In file included from /usr/include/c++/10/vector:72,
2023-06-19T14:49:08,135                    from moleculekit/tmalign/tmalign_util.cpp:806:
2023-06-19T14:49:08,136   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-06-19T14:49:08,136   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-06-19T14:49:08,136     426 |       vector<_Tp, _Alloc>::
2023-06-19T14:49:08,136         |       ^~~~~~~~~~~~~~~~~~~
2023-06-19T14:49:08,636   In file included from /usr/include/c++/10/vector:67,
2023-06-19T14:49:08,636                    from moleculekit/tmalign/tmalign_util.cpp:806:
2023-06-19T14:49:08,636   /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject*, PyObject*)’:
2023-06-19T14:49:08,636   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-06-19T14:49:08,637    1198 |    _M_realloc_insert(end(), __x);
2023-06-19T14:49:08,637         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-06-19T14:49:08,637   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-06-19T14:49:08,637    1198 |    _M_realloc_insert(end(), __x);
2023-06-19T14:49:08,637         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-06-19T14:49:08,638   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-06-19T14:49:08,638    1198 |    _M_realloc_insert(end(), __x);
2023-06-19T14:49:08,638         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-06-19T14:49:10,704   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so
2023-06-19T14:49:11,145   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-06-19T14:49:11,145   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.7.2'
2023-06-19T14:49:11,145   installing to build/bdist.linux-armv7l/wheel
2023-06-19T14:49:11,146   running install
2023-06-19T14:49:11,171   running install_lib
2023-06-19T14:49:11,180   creating build/bdist.linux-armv7l
2023-06-19T14:49:11,180   creating build/bdist.linux-armv7l/wheel
2023-06-19T14:49:11,183   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,184   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-06-19T14:49:11,185   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-06-19T14:49:11,187   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-06-19T14:49:11,209   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,235   copying build/lib.linux-armv7l-cpython-39/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,237   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-06-19T14:49:11,238   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-06-19T14:49:11,240   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-06-19T14:49:11,241   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-06-19T14:49:11,244   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-06-19T14:49:11,246   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,247   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,250   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-06-19T14:49:11,251   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-06-19T14:49:11,254   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-06-19T14:49:11,256   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-06-19T14:49:11,258   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-06-19T14:49:11,259   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,262   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,264   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,266   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,268   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-06-19T14:49:11,270   copying build/lib.linux-armv7l-cpython-39/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,272   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,273   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,276   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-06-19T14:49:11,277   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-06-19T14:49:11,279   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-06-19T14:49:11,299   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,355   copying build/lib.linux-armv7l-cpython-39/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,358   copying build/lib.linux-armv7l-cpython-39/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,360   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-06-19T14:49:11,361   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-06-19T14:49:11,378   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-06-19T14:49:11,381   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-06-19T14:49:11,382   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-06-19T14:49:11,384   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-06-19T14:49:11,405   copying build/lib.linux-armv7l-cpython-39/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,407   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,494   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,497   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,516   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-06-19T14:49:11,518   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-06-19T14:49:11,519   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-06-19T14:49:11,521   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-06-19T14:49:11,524   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-06-19T14:49:11,525   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-06-19T14:49:11,528   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-06-19T14:49:11,529   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-06-19T14:49:11,532   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-06-19T14:49:11,535   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-06-19T14:49:11,538   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-06-19T14:49:11,540   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-06-19T14:49:11,541   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-06-19T14:49:11,544   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-06-19T14:49:11,546   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-06-19T14:49:11,547   copying build/lib.linux-armv7l-cpython-39/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,549   copying build/lib.linux-armv7l-cpython-39/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,552   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,553   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-06-19T14:49:11,554   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-06-19T14:49:11,572   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-06-19T14:49:11,574   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,595   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,598   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,625   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,652   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,677   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-06-19T14:49:11,678   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-06-19T14:49:11,680   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-06-19T14:49:11,703   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-06-19T14:49:11,705   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-06-19T14:49:11,706   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-06-19T14:49:11,708   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-06-19T14:49:11,732   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-06-19T14:49:11,733   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-06-19T14:49:11,735   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-06-19T14:49:11,758   copying build/lib.linux-armv7l-cpython-39/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,760   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,784   copying build/lib.linux-armv7l-cpython-39/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,787   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:11,809   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-06-19T14:49:11,811   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-06-19T14:49:11,812   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-06-19T14:49:11,815   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-06-19T14:49:11,819   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,820   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,822   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,824   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,826   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,828   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,830   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,832   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,835   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,837   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,838   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,840   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,842   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,844   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,846   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,848   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,851   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,853   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,855   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,857   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,859   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,861   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,863   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,865   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,867   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,869   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,871   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,873   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,875   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,877   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,879   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,882   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,884   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,886   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,888   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,890   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,892   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,894   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,896   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,898   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,900   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,902   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,904   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,907   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,908   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,910   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,912   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,914   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,916   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,918   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,920   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,922   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,924   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,926   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,928   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,930   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,932   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,934   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,936   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,938   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,940   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,942   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,944   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,946   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,948   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,950   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,952   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,954   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,956   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,958   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,959   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,961   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,963   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,965   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,966   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,968   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,970   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,972   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,974   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,975   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,977   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,979   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,980   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,982   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,984   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,985   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,987   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,989   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,991   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,992   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,994   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,996   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,997   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:11,999   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,001   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,002   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,004   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,006   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,008   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,009   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,011   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,013   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,014   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,016   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,017   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,019   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,021   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,023   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,024   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,026   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,028   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,029   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,031   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,032   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,034   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,036   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,038   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,039   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,041   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,042   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,044   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,046   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,048   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,049   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,051   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,052   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,054   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,056   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,057   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,059   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,060   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,062   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,064   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,065   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,067   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,069   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,070   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,072   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,074   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,076   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,077   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,079   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,080   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,082   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,084   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,085   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,087   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,089   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,091   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,092   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,094   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,095   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,097   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,099   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,101   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,103   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,104   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,106   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,108   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,110   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,112   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,114   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,116   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,118   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,120   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,122   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,124   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,126   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,129   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,131   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,133   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,135   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,137   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,139   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,141   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,143   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-06-19T14:49:12,146   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-06-19T14:49:12,400   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-06-19T14:49:12,402   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-06-19T14:49:12,405   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,406   copying build/lib.linux-armv7l-cpython-39/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,410   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,411   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,413   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,416   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,418   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,421   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,423   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-06-19T14:49:12,424   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-06-19T14:49:12,426   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-06-19T14:49:12,428   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,430   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,432   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,434   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,436   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,438   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,440   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,442   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-06-19T14:49:12,445   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,446   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,448   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,450   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,452   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,455   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,457   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,459   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,462   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,464   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,467   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,469   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,471   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,473   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,475   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,477   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-06-19T14:49:12,480   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,504   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,507   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-06-19T14:49:12,509   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-06-19T14:49:12,510   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-06-19T14:49:12,513   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-06-19T14:49:12,515   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-06-19T14:49:12,517   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-06-19T14:49:12,519   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-06-19T14:49:12,551   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-06-19T14:49:12,554   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-06-19T14:49:12,555   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-06-19T14:49:12,556   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-06-19T14:49:12,559   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-06-19T14:49:12,560   copying build/lib.linux-armv7l-cpython-39/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,563   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-06-19T14:49:12,564   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-06-19T14:49:12,567   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-06-19T14:49:12,568   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-06-19T14:49:12,572   copying build/lib.linux-armv7l-cpython-39/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,576   copying build/lib.linux-armv7l-cpython-39/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,578   copying build/lib.linux-armv7l-cpython-39/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,582   copying build/lib.linux-armv7l-cpython-39/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,584   copying build/lib.linux-armv7l-cpython-39/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,587   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-06-19T14:49:12,588   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-06-19T14:49:12,613   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-06-19T14:49:12,616   copying build/lib.linux-armv7l-cpython-39/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,617   copying build/lib.linux-armv7l-cpython-39/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-06-19T14:49:12,620   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-06-19T14:49:12,621   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-06-19T14:49:12,622   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-06-19T14:49:12,629   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-06-19T14:49:12,651   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-06-19T14:49:12,653   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-06-19T14:49:12,655   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-06-19T14:49:12,656   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-06-19T14:49:12,658   running install_egg_info
2023-06-19T14:49:12,664   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.7.2-py3.9.egg-info
2023-06-19T14:49:12,677   running install_scripts
2023-06-19T14:49:12,725   creating build/bdist.linux-armv7l/wheel/moleculekit-1.7.2.dist-info/WHEEL
2023-06-19T14:49:12,728   creating '/tmp/pip-wheel-pp2eyrlg/.tmp-8vd0unnr/moleculekit-1.7.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-19T14:49:12,731   adding 'moleculekit/__init__.py'
2023-06-19T14:49:12,732   adding 'moleculekit/_version.py'
2023-06-19T14:49:12,734   adding 'moleculekit/align.py'
2023-06-19T14:49:13,029   adding 'moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:13,041   adding 'moleculekit/bondguesser.py'
2023-06-19T14:49:13,256   adding 'moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:13,263   adding 'moleculekit/config.py'
2023-06-19T14:49:13,265   adding 'moleculekit/dihedral.py'
2023-06-19T14:49:13,266   adding 'moleculekit/distance.py'
2023-06-19T14:49:13,541   adding 'moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:13,551   adding 'moleculekit/home.py'
2023-06-19T14:49:13,552   adding 'moleculekit/logging.ini'
2023-06-19T14:49:13,565   adding 'moleculekit/molecule.py'
2023-06-19T14:49:13,766   adding 'moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:13,774   adding 'moleculekit/opm.py'
2023-06-19T14:49:13,776   adding 'moleculekit/periodictable.py'
2023-06-19T14:49:13,778   adding 'moleculekit/pymolgraphics.py'
2023-06-19T14:49:13,779   adding 'moleculekit/rcsb.py'
2023-06-19T14:49:13,781   adding 'moleculekit/rdkitintegration.py'
2023-06-19T14:49:13,792   adding 'moleculekit/readers.py'
2023-06-19T14:49:14,374   adding 'moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:14,398   adding 'moleculekit/util.py'
2023-06-19T14:49:14,399   adding 'moleculekit/version.py'
2023-06-19T14:49:14,401   adding 'moleculekit/viewer.py'
2023-06-19T14:49:14,402   adding 'moleculekit/vmd_wrapper'
2023-06-19T14:49:14,404   adding 'moleculekit/vmdgraphics.py'
2023-06-19T14:49:14,406   adding 'moleculekit/vmdviewer.py'
2023-06-19T14:49:14,613   adding 'moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:14,624   adding 'moleculekit/writers.py'
2023-06-19T14:49:14,863   adding 'moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:14,871   adding 'moleculekit/atomselect/__init__.py'
2023-06-19T14:49:14,873   adding 'moleculekit/atomselect/analyze.py'
2023-06-19T14:49:14,875   adding 'moleculekit/atomselect/atomselect.py'
2023-06-19T14:49:14,877   adding 'moleculekit/atomselect/languageparser.py'
2023-06-19T14:49:14,961   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-06-19T14:49:14,971   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-06-19T14:49:15,043   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-06-19T14:49:15,051   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-06-19T14:49:15,129   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-06-19T14:49:15,137   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-06-19T14:49:15,139   adding 'moleculekit/interactions/__init__.py'
2023-06-19T14:49:15,391   adding 'moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:15,628   adding 'moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:15,638   adding 'moleculekit/interactions/interactions.py'
2023-06-19T14:49:15,889   adding 'moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:16,147   adding 'moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so'
2023-06-19T14:49:16,228   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-06-19T14:49:16,235   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-06-19T14:49:16,307   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-06-19T14:49:16,315   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-06-19T14:49:16,387   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-06-19T14:49:16,395   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-06-19T14:49:16,466   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-06-19T14:49:16,474   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-06-19T14:49:16,542   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-06-19T14:49:16,549   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-06-19T14:49:16,550   adding 'moleculekit/pdbx/__init__.py'
2023-06-19T14:49:16,554   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-06-19T14:49:16,557   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-06-19T14:49:16,559   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-06-19T14:49:16,560   adding 'moleculekit/pdbx/reader/__init__.py'
2023-06-19T14:49:16,562   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-06-19T14:49:16,564   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-06-19T14:49:16,565   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-06-19T14:49:16,566   adding 'moleculekit/pdbx/tests/__init__.py'
2023-06-19T14:49:16,569   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-06-19T14:49:16,570   adding 'moleculekit/pdbx/writer/__init__.py'
2023-06-19T14:49:16,571   adding 'moleculekit/ply/__init__.py'
2023-06-19T14:49:16,576   adding 'moleculekit/ply/lex.py'
2023-06-19T14:49:16,587   adding 'moleculekit/ply/yacc.py'
2023-06-19T14:49:16,590   adding 'moleculekit/projections/__init__.py'
2023-06-19T14:49:16,592   adding 'moleculekit/projections/metriccoordinate.py'
2023-06-19T14:49:16,595   adding 'moleculekit/projections/metricdihedral.py'
2023-06-19T14:49:16,599   adding 'moleculekit/projections/metricdistance.py'
2023-06-19T14:49:16,601   adding 'moleculekit/projections/metricfluctuation.py'
2023-06-19T14:49:16,603   adding 'moleculekit/projections/metricgyration.py'
2023-06-19T14:49:16,607   adding 'moleculekit/projections/metricplumed2.py'
2023-06-19T14:49:16,608   adding 'moleculekit/projections/metricrmsd.py'
2023-06-19T14:49:16,610   adding 'moleculekit/projections/metricsasa.py'
2023-06-19T14:49:16,612   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-06-19T14:49:16,614   adding 'moleculekit/projections/metricshell.py'
2023-06-19T14:49:16,616   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-06-19T14:49:16,617   adding 'moleculekit/projections/metrictmscore.py'
2023-06-19T14:49:16,619   adding 'moleculekit/projections/projection.py'
2023-06-19T14:49:16,620   adding 'moleculekit/projections/util.py'
2023-06-19T14:49:16,622   adding 'moleculekit/share/ALA.cif'
2023-06-19T14:49:16,624   adding 'moleculekit/share/backbone.cif'
2023-06-19T14:49:17,941   adding 'moleculekit/share/opm_sequences.json'
2023-06-19T14:49:18,026   adding 'moleculekit/share/atomselect/atomselect.json'
2023-06-19T14:49:18,031   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-06-19T14:49:18,032   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-06-19T14:49:18,033   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-06-19T14:49:18,034   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-06-19T14:49:18,035   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-06-19T14:49:18,036   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-06-19T14:49:18,038   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-06-19T14:49:18,039   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-06-19T14:49:18,040   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-06-19T14:49:18,041   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-06-19T14:49:18,043   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-06-19T14:49:18,044   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-06-19T14:49:18,045   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-06-19T14:49:18,046   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-06-19T14:49:18,048   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-06-19T14:49:18,049   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-06-19T14:49:18,050   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-06-19T14:49:18,051   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-06-19T14:49:18,053   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-06-19T14:49:18,054   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-06-19T14:49:18,055   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-06-19T14:49:18,056   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-06-19T14:49:18,058   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-06-19T14:49:18,059   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-06-19T14:49:18,060   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-06-19T14:49:18,061   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-06-19T14:49:18,063   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-06-19T14:49:18,064   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-06-19T14:49:18,065   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-06-19T14:49:18,066   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-06-19T14:49:18,067   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-06-19T14:49:18,068   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-06-19T14:49:18,069   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-06-19T14:49:18,071   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-06-19T14:49:18,072   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-06-19T14:49:18,073   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-06-19T14:49:18,074   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-06-19T14:49:18,075   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-06-19T14:49:18,077   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-06-19T14:49:18,078   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-06-19T14:49:18,079   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-06-19T14:49:18,080   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-06-19T14:49:18,082   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-06-19T14:49:18,083   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-06-19T14:49:18,084   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-06-19T14:49:18,085   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-06-19T14:49:18,087   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-06-19T14:49:18,088   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-06-19T14:49:18,089   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-06-19T14:49:18,090   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-06-19T14:49:18,091   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-06-19T14:49:18,093   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-06-19T14:49:18,094   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-06-19T14:49:18,095   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-06-19T14:49:18,096   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-06-19T14:49:18,097   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-06-19T14:49:18,099   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-06-19T14:49:18,100   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-06-19T14:49:18,101   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-06-19T14:49:18,102   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-06-19T14:49:18,103   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-06-19T14:49:18,105   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-06-19T14:49:18,106   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-06-19T14:49:18,107   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-06-19T14:49:18,108   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-06-19T14:49:18,109   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-06-19T14:49:18,113   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-06-19T14:49:18,114   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-06-19T14:49:18,116   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-06-19T14:49:18,117   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-06-19T14:49:18,118   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-06-19T14:49:18,119   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-06-19T14:49:18,120   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-06-19T14:49:18,122   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-06-19T14:49:18,123   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-06-19T14:49:18,124   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-06-19T14:49:18,125   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-06-19T14:49:18,126   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-06-19T14:49:18,127   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-06-19T14:49:18,129   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-06-19T14:49:18,130   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-06-19T14:49:18,131   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-06-19T14:49:18,132   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-06-19T14:49:18,133   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-06-19T14:49:18,135   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-06-19T14:49:18,136   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-06-19T14:49:18,137   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-06-19T14:49:18,138   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-06-19T14:49:18,140   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-06-19T14:49:18,141   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-06-19T14:49:18,142   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-06-19T14:49:18,143   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-06-19T14:49:18,144   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-06-19T14:49:18,146   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-06-19T14:49:18,147   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-06-19T14:49:18,148   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-06-19T14:49:18,149   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-06-19T14:49:18,150   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-06-19T14:49:18,152   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-06-19T14:49:18,153   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-06-19T14:49:18,154   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-06-19T14:49:18,155   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-06-19T14:49:18,157   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-06-19T14:49:18,158   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-06-19T14:49:18,159   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-06-19T14:49:18,160   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-06-19T14:49:18,161   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-06-19T14:49:18,162   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-06-19T14:49:18,164   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-06-19T14:49:18,165   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-06-19T14:49:18,166   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-06-19T14:49:18,167   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-06-19T14:49:18,169   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-06-19T14:49:18,170   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-06-19T14:49:18,171   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-06-19T14:49:18,172   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-06-19T14:49:18,173   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-06-19T14:49:18,175   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-06-19T14:49:18,176   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-06-19T14:49:18,177   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-06-19T14:49:18,178   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-06-19T14:49:18,180   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-06-19T14:49:18,181   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-06-19T14:49:18,182   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-06-19T14:49:18,183   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-06-19T14:49:18,184   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-06-19T14:49:18,186   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-06-19T14:49:18,187   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-06-19T14:49:18,188   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-06-19T14:49:18,189   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-06-19T14:49:18,191   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-06-19T14:49:18,192   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-06-19T14:49:18,193   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-06-19T14:49:18,194   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-06-19T14:49:18,195   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-06-19T14:49:18,197   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-06-19T14:49:18,198   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-06-19T14:49:18,199   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-06-19T14:49:18,200   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-06-19T14:49:18,201   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-06-19T14:49:18,202   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-06-19T14:49:18,204   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-06-19T14:49:18,205   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-06-19T14:49:18,206   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-06-19T14:49:18,207   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-06-19T14:49:18,208   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-06-19T14:49:18,210   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-06-19T14:49:18,211   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-06-19T14:49:18,212   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-06-19T14:49:18,213   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-06-19T14:49:18,215   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-06-19T14:49:18,216   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-06-19T14:49:18,217   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-06-19T14:49:18,218   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-06-19T14:49:18,220   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-06-19T14:49:18,221   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-06-19T14:49:18,222   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-06-19T14:49:18,223   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-06-19T14:49:18,224   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-06-19T14:49:18,226   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-06-19T14:49:18,227   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-06-19T14:49:18,228   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-06-19T14:49:18,229   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-06-19T14:49:18,230   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-06-19T14:49:18,232   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-06-19T14:49:18,233   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-06-19T14:49:18,234   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-06-19T14:49:18,235   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-06-19T14:49:18,237   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-06-19T14:49:18,238   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-06-19T14:49:18,240   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-06-19T14:49:18,241   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-06-19T14:49:18,242   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-06-19T14:49:18,243   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-06-19T14:49:18,245   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-06-19T14:49:18,246   adding 'moleculekit/smallmol/__init__.py'
2023-06-19T14:49:18,251   adding 'moleculekit/smallmol/smallmol.py'
2023-06-19T14:49:18,254   adding 'moleculekit/smallmol/smallmollib.py'
2023-06-19T14:49:18,256   adding 'moleculekit/smallmol/test_smallmol.py'
2023-06-19T14:49:18,257   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-06-19T14:49:18,259   adding 'moleculekit/smallmol/util.py'
2023-06-19T14:49:18,261   adding 'moleculekit/smallmol/tools/__init__.py'
2023-06-19T14:49:18,263   adding 'moleculekit/smallmol/tools/clustering.py'
2023-06-19T14:49:18,264   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-06-19T14:49:18,266   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-06-19T14:49:18,336   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-06-19T14:49:18,343   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-06-19T14:49:18,344   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-06-19T14:49:18,346   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-06-19T14:49:18,364   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-06-19T14:49:18,367   adding 'moleculekit/tools/__init__.py'
2023-06-19T14:49:18,369   adding 'moleculekit/tools/atomtyper.py'
2023-06-19T14:49:18,371   adding 'moleculekit/tools/autosegment.py'
2023-06-19T14:49:18,373   adding 'moleculekit/tools/crystalpacking.py'
2023-06-19T14:49:18,375   adding 'moleculekit/tools/detect.py'
2023-06-19T14:49:18,377   adding 'moleculekit/tools/docking.py'
2023-06-19T14:49:18,379   adding 'moleculekit/tools/graphalignment.py'
2023-06-19T14:49:18,381   adding 'moleculekit/tools/hhblitsprofile.py'
2023-06-19T14:49:18,382   adding 'moleculekit/tools/moleculechecks.py'
2023-06-19T14:49:18,388   adding 'moleculekit/tools/preparation.py'
2023-06-19T14:49:18,391   adding 'moleculekit/tools/preparation_customres.py'
2023-06-19T14:49:18,393   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-06-19T14:49:18,396   adding 'moleculekit/tools/voxeldescriptors.py'
2023-06-19T14:49:18,398   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-06-19T14:49:18,399   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-06-19T14:49:18,469   adding 'moleculekit/wrapping/wrapping.cpp'
2023-06-19T14:49:18,476   adding 'moleculekit/wrapping/wrapping.pyx'
2023-06-19T14:49:18,546   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-06-19T14:49:18,553   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-06-19T14:49:18,554   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-06-19T14:49:18,557   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-06-19T14:49:18,559   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-06-19T14:49:18,560   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-06-19T14:49:18,567   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-06-19T14:49:18,569   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-06-19T14:49:18,571   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-06-19T14:49:18,574   adding 'moleculekit-1.7.2.dist-info/LICENSE'
2023-06-19T14:49:18,575   adding 'moleculekit-1.7.2.dist-info/METADATA'
2023-06-19T14:49:18,576   adding 'moleculekit-1.7.2.dist-info/WHEEL'
2023-06-19T14:49:18,577   adding 'moleculekit-1.7.2.dist-info/top_level.txt'
2023-06-19T14:49:18,582   adding 'moleculekit-1.7.2.dist-info/RECORD'
2023-06-19T14:49:18,764   removing build/bdist.linux-armv7l/wheel
2023-06-19T14:49:19,031   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-06-19T14:49:19,524   Created wheel for moleculekit: filename=moleculekit-1.7.2-cp39-cp39-linux_armv7l.whl size=11511719 sha256=31a656ec30b0e743f1639a96ea939f219fac66607e81ef0b3fec8c5565b5c4e5
2023-06-19T14:49:19,525   Stored in directory: /tmp/pip-ephem-wheel-cache-aydgyj97/wheels/93/e5/4f/079eeee422ccb2f5e7ee867b8fa547a40df94a4feb0c4e4c10
2023-06-19T14:49:19,550 Successfully built moleculekit
2023-06-19T14:49:19,818 Removed build tracker: '/tmp/pip-build-tracker-bxwykn2i'