2023-06-21T11:08:59,794 Created temporary directory: /tmp/pip-build-tracker-npfnnvis 2023-06-21T11:08:59,797 Initialized build tracking at /tmp/pip-build-tracker-npfnnvis 2023-06-21T11:08:59,797 Created build tracker: /tmp/pip-build-tracker-npfnnvis 2023-06-21T11:08:59,798 Entered build tracker: /tmp/pip-build-tracker-npfnnvis 2023-06-21T11:08:59,799 Created temporary directory: /tmp/pip-wheel-fl1j_htb 2023-06-21T11:08:59,808 Created temporary directory: /tmp/pip-ephem-wheel-cache-m068gbxv 2023-06-21T11:08:59,866 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-21T11:08:59,874 2 location(s) to search for versions of proteinshake: 2023-06-21T11:08:59,874 * https://pypi.org/simple/proteinshake/ 2023-06-21T11:08:59,874 * https://www.piwheels.org/simple/proteinshake/ 2023-06-21T11:08:59,875 Fetching project page and analyzing links: https://pypi.org/simple/proteinshake/ 2023-06-21T11:08:59,876 Getting page https://pypi.org/simple/proteinshake/ 2023-06-21T11:08:59,880 Found index url https://pypi.org/simple/ 2023-06-21T11:09:00,075 Fetched page https://pypi.org/simple/proteinshake/ as application/vnd.pypi.simple.v1+json 2023-06-21T11:09:00,088 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/a5/59/a8fe5ed6dd24b2ae0e1cb8fed33fcef955a43a2a20e95f3842fee0f858cf/proteinshake-0.0.1-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,090 Found link https://files.pythonhosted.org/packages/d1/d9/aa225eacb84eceb9ac0f658a924b4b1846eab7dae616ffc619d6ca89e564/proteinshake-0.0.1.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.0.1 2023-06-21T11:09:00,091 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/bb/7a/3ebc561a882754ecb77bde6bb92b5039e76fb31c9489bebea6efa159da36/proteinshake-0.0.2-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,092 Found link https://files.pythonhosted.org/packages/c9/53/f03b9179a868217082129e53c1d7c6ec25f0515762f1d657d827307a5454/proteinshake-0.0.2.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.0.2 2023-06-21T11:09:00,093 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/07/f3/43877c9feb864eb71d82be69d5621c5eba4073502c2f3d71fd902e4096b8/proteinshake-0.0.3-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,094 Found link https://files.pythonhosted.org/packages/67/ea/c47a75b89e64b30a2914cff747905a5a2123d88e03c1495ca3bf8a092399/proteinshake-0.0.3.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.0.3 2023-06-21T11:09:00,095 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/95/5b/9782a06ae177f359ae1292e39a954387d9453bd0ec76acfff729b9fe421d/proteinshake-0.1.0-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,096 Found link https://files.pythonhosted.org/packages/e0/f1/f707e6bb72c0b2ee8db52887640713f9724fdb35d4c193801bc5706f5de3/proteinshake-0.1.0.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.1.0 2023-06-21T11:09:00,097 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/52/be/25f55cbfc0d1cc1db86a2b7d55686a7418bcead4a66976fd0960a0781390/proteinshake-0.2.1-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,098 Found link https://files.pythonhosted.org/packages/7f/22/9732d068fb9427e5acf886c8c7e5fcb5095728fcbaa8558d0fd854f4eb4d/proteinshake-0.2.1.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.2.1 2023-06-21T11:09:00,099 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/79/f9/1520fb086bb98851fa6dfd505559f4ce9a3669500b159e10d53a424f7043/proteinshake-0.3.3-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,101 Found link https://files.pythonhosted.org/packages/15/21/2489347d94b9a7a4c0dbb08bf3e2de4e7e71ff814ea604b2f494f4e6c5d8/proteinshake-0.3.3.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.3 2023-06-21T11:09:00,102 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/3d/3c/a9ab30988a57e8abd37fe0bfcd92d72980e1b9b2b55e21df120eb4e4818a/proteinshake-0.3.7-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,103 Found link https://files.pythonhosted.org/packages/a7/5c/a60412a4d0fb8608a89d1c3599fbb123b031568b9159e27925a6f9b5dd04/proteinshake-0.3.7.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.7 2023-06-21T11:09:00,104 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/eb/04/df102757f20a5f73722d2f9406581400bdc86f6a0753201bcbda1dc33118/proteinshake-0.3.8-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,105 Found link https://files.pythonhosted.org/packages/f8/c4/cb58349aeaf80a33b8cd177d045ca8dd36c9b0b1e59d98c79146575bb55c/proteinshake-0.3.8.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.8 2023-06-21T11:09:00,106 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/01/af/0593993f9d8323bf71a5df53d105f4ed01d49c93781d627707aa761263eb/proteinshake-0.3.9-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,107 Found link https://files.pythonhosted.org/packages/01/f3/4ce96d888eabb6aab564caaf0fbd0b1047bf8faa4b8137849b659320b6a0/proteinshake-0.3.9.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.9 2023-06-21T11:09:00,108 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/e1/0e/6fdc82ab85f0529db584e8a3d1464aa02df2c085f2729c9017ef59edeea1/proteinshake-0.3.11-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,109 Found link https://files.pythonhosted.org/packages/69/53/6919d9d8e61d5d543436bc374299011ca3c116ab132f5ce3907b01f21607/proteinshake-0.3.11.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.11 2023-06-21T11:09:00,110 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/e5/7b/78b291ba18bd967e602e8e7f7431816cbc07625b4974e2172d7c8c0e8915/proteinshake-0.3.12-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,111 Found link https://files.pythonhosted.org/packages/ce/29/1958af783d06155fb671c63f56e46b832e90efd139915fa0dab3ba667ae5/proteinshake-0.3.12.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.12 2023-06-21T11:09:00,112 Fetching project page and analyzing links: https://www.piwheels.org/simple/proteinshake/ 2023-06-21T11:09:00,113 Getting page https://www.piwheels.org/simple/proteinshake/ 2023-06-21T11:09:00,115 Found index url https://www.piwheels.org/simple/ 2023-06-21T11:09:00,338 Fetched page https://www.piwheels.org/simple/proteinshake/ as text/html 2023-06-21T11:09:00,348 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.11-py3-none-any.whl#sha256=a9b200b5dcbb388c381aef741b709ceeb21e4416cee97ee76dd090e6320e5739 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,349 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.9-py3-none-any.whl#sha256=07b6fc8f9a64f3f25efc2d2b31ffe9e0774923f49d925baebe36eb9817390d77 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,349 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.8-py3-none-any.whl#sha256=95530a8ddcc0a495dae9a09363ab7f54c4650d51aa5a751b9619b117856ba60b (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,350 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.7-py3-none-any.whl#sha256=4a047fe2cabb3dd2405510f6a448a459ce21dc56292943f38eacefe758d857ce (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,351 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.3-py3-none-any.whl#sha256=2b7e9dee4e00e97000ac8e3988f6e1765bf8813585a033dbb7f37250ceceee33 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,351 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.2.1-py3-none-any.whl#sha256=ffb664ce6b8f319485e4c45923c8fd5ec5ea28f25611d7ff5dbda045e595c757 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,352 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.1.0-py3-none-any.whl#sha256=6a90c5ae85b54351a8a2dd7717c135bd1dd930a7a06fe0051ef2d1fa2b67b26a (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,352 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.0.3-py3-none-any.whl#sha256=addf8a16e17d0dd98bd6bc1b03586ba7481af3f8ee5596094ce3fe1e03ffec32 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,353 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.0.2-py3-none-any.whl#sha256=11984eccc77515359b725f992361aeef0df765aae3cd46bec2aa2367af5b0321 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,353 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.0.1-py3-none-any.whl#sha256=5abc8558b18f8d5e528029101f497c433e7b36e840e3e43334be23eab679d13d (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T11:09:00,354 Skipping link: not a file: https://www.piwheels.org/simple/proteinshake/ 2023-06-21T11:09:00,354 Skipping link: not a file: https://pypi.org/simple/proteinshake/ 2023-06-21T11:09:00,391 Given no hashes to check 1 links for project 'proteinshake': discarding no candidates 2023-06-21T11:09:00,422 Collecting proteinshake==0.3.12 2023-06-21T11:09:00,426 Created temporary directory: /tmp/pip-unpack-tykjygz0 2023-06-21T11:09:00,618 Downloading proteinshake-0.3.12.tar.gz (43 kB) 2023-06-21T11:09:00,924 Added proteinshake==0.3.12 from https://files.pythonhosted.org/packages/ce/29/1958af783d06155fb671c63f56e46b832e90efd139915fa0dab3ba667ae5/proteinshake-0.3.12.tar.gz to build tracker '/tmp/pip-build-tracker-npfnnvis' 2023-06-21T11:09:00,928 Running setup.py (path:/tmp/pip-wheel-fl1j_htb/proteinshake_4481fb876d5949ddadb7b67e8977c19d/setup.py) egg_info for package proteinshake 2023-06-21T11:09:00,930 Created temporary directory: /tmp/pip-pip-egg-info-ckv_tn4n 2023-06-21T11:09:00,930 Preparing metadata (setup.py): started 2023-06-21T11:09:00,933 Running command python setup.py egg_info 2023-06-21T11:09:02,572 running egg_info 2023-06-21T11:09:02,574 creating /tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info 2023-06-21T11:09:02,639 writing /tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/PKG-INFO 2023-06-21T11:09:02,644 writing dependency_links to /tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/dependency_links.txt 2023-06-21T11:09:02,649 writing requirements to /tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/requires.txt 2023-06-21T11:09:02,651 writing top-level names to /tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/top_level.txt 2023-06-21T11:09:02,654 writing manifest file '/tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/SOURCES.txt' 2023-06-21T11:09:02,872 reading manifest file '/tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/SOURCES.txt' 2023-06-21T11:09:02,875 adding license file 'LICENSE' 2023-06-21T11:09:02,884 writing manifest file '/tmp/pip-pip-egg-info-ckv_tn4n/proteinshake.egg-info/SOURCES.txt' 2023-06-21T11:09:03,006 Preparing metadata (setup.py): finished with status 'done' 2023-06-21T11:09:03,020 Source in /tmp/pip-wheel-fl1j_htb/proteinshake_4481fb876d5949ddadb7b67e8977c19d has version 0.3.12, which satisfies requirement proteinshake==0.3.12 from https://files.pythonhosted.org/packages/ce/29/1958af783d06155fb671c63f56e46b832e90efd139915fa0dab3ba667ae5/proteinshake-0.3.12.tar.gz 2023-06-21T11:09:03,022 Removed proteinshake==0.3.12 from https://files.pythonhosted.org/packages/ce/29/1958af783d06155fb671c63f56e46b832e90efd139915fa0dab3ba667ae5/proteinshake-0.3.12.tar.gz from build tracker '/tmp/pip-build-tracker-npfnnvis' 2023-06-21T11:09:03,038 Created temporary directory: /tmp/pip-unpack-uv5lv3k6 2023-06-21T11:09:03,039 Building wheels for collected packages: proteinshake 2023-06-21T11:09:03,048 Created temporary directory: /tmp/pip-wheel-t3dlt8_z 2023-06-21T11:09:03,049 Building wheel for proteinshake (setup.py): started 2023-06-21T11:09:03,051 Destination directory: /tmp/pip-wheel-t3dlt8_z 2023-06-21T11:09:03,051 Running command python setup.py bdist_wheel 2023-06-21T11:09:04,744 running bdist_wheel 2023-06-21T11:09:05,468 running build 2023-06-21T11:09:05,469 running build_py 2023-06-21T11:09:05,544 creating build 2023-06-21T11:09:05,546 creating build/lib 2023-06-21T11:09:05,548 creating build/lib/proteinshake 2023-06-21T11:09:05,551 copying proteinshake/__init__.py -> build/lib/proteinshake 2023-06-21T11:09:05,557 creating build/lib/tests 2023-06-21T11:09:05,559 copying tests/test_preprocess.py -> build/lib/tests 2023-06-21T11:09:05,563 copying tests/test_datasets.py -> build/lib/tests 2023-06-21T11:09:05,567 copying tests/test_transforms.py -> build/lib/tests 2023-06-21T11:09:05,570 copying tests/test_frameworks.py -> build/lib/tests 2023-06-21T11:09:05,574 copying tests/__init__.py -> build/lib/tests 2023-06-21T11:09:05,577 copying tests/test_tasks.py -> build/lib/tests 2023-06-21T11:09:05,583 creating build/lib/proteinshake/frameworks 2023-06-21T11:09:05,585 copying proteinshake/frameworks/tf.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,589 copying proteinshake/frameworks/dgl.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,593 copying proteinshake/frameworks/torch.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,597 copying proteinshake/frameworks/pyg.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,600 copying proteinshake/frameworks/nx.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,604 copying proteinshake/frameworks/dataset.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,608 copying proteinshake/frameworks/np.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,611 copying proteinshake/frameworks/__init__.py -> build/lib/proteinshake/frameworks 2023-06-21T11:09:05,616 creating build/lib/proteinshake/transforms 2023-06-21T11:09:05,618 copying proteinshake/transforms/transforms.py -> build/lib/proteinshake/transforms 2023-06-21T11:09:05,622 copying proteinshake/transforms/coords.py -> build/lib/proteinshake/transforms 2023-06-21T11:09:05,625 copying proteinshake/transforms/__init__.py -> build/lib/proteinshake/transforms 2023-06-21T11:09:05,631 creating build/lib/proteinshake/tasks 2023-06-21T11:09:05,632 copying proteinshake/tasks/pfam_task.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,636 copying proteinshake/tasks/binding_site_detection.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,640 copying proteinshake/tasks/task.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,644 copying proteinshake/tasks/ligand_affinity.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,647 copying proteinshake/tasks/structural_class.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,650 copying proteinshake/tasks/enzyme_class.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,654 copying proteinshake/tasks/structure_search.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,658 copying proteinshake/tasks/__init__.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,662 copying proteinshake/tasks/protein_protein_interface.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,666 copying proteinshake/tasks/gene_ontology.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,670 copying proteinshake/tasks/structure_similarity.py -> build/lib/proteinshake/tasks 2023-06-21T11:09:05,675 creating build/lib/proteinshake/utils 2023-06-21T11:09:05,676 copying proteinshake/utils/uniprot.py -> build/lib/proteinshake/utils 2023-06-21T11:09:05,680 copying proteinshake/utils/io.py -> build/lib/proteinshake/utils 2023-06-21T11:09:05,685 copying proteinshake/utils/embeddings.py -> build/lib/proteinshake/utils 2023-06-21T11:09:05,688 copying proteinshake/utils/similarity.py -> build/lib/proteinshake/utils 2023-06-21T11:09:05,692 copying proteinshake/utils/__init__.py -> build/lib/proteinshake/utils 2023-06-21T11:09:05,697 creating build/lib/proteinshake/datasets 2023-06-21T11:09:05,699 copying proteinshake/datasets/tm_align.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,704 copying proteinshake/datasets/enzyme_commission.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,708 copying proteinshake/datasets/scop.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,711 copying proteinshake/datasets/dataset.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,717 copying proteinshake/datasets/rcsb.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,721 copying proteinshake/datasets/alphafold.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,726 copying proteinshake/datasets/__init__.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,729 copying proteinshake/datasets/protein_family.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,733 copying proteinshake/datasets/protein_ligand_interface.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,737 copying proteinshake/datasets/protein_protein_interface.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,742 copying proteinshake/datasets/gene_ontology.py -> build/lib/proteinshake/datasets 2023-06-21T11:09:05,747 creating build/lib/proteinshake/representations 2023-06-21T11:09:05,749 copying proteinshake/representations/voxel.py -> build/lib/proteinshake/representations 2023-06-21T11:09:05,753 copying proteinshake/representations/point.py -> build/lib/proteinshake/representations 2023-06-21T11:09:05,757 copying proteinshake/representations/__init__.py -> build/lib/proteinshake/representations 2023-06-21T11:09:05,760 copying proteinshake/representations/graph.py -> build/lib/proteinshake/representations 2023-06-21T11:09:05,763 running egg_info 2023-06-21T11:09:05,914 writing proteinshake.egg-info/PKG-INFO 2023-06-21T11:09:05,919 writing dependency_links to proteinshake.egg-info/dependency_links.txt 2023-06-21T11:09:05,924 writing requirements to proteinshake.egg-info/requires.txt 2023-06-21T11:09:05,926 writing top-level names to proteinshake.egg-info/top_level.txt 2023-06-21T11:09:06,011 reading manifest file 'proteinshake.egg-info/SOURCES.txt' 2023-06-21T11:09:06,018 adding license file 'LICENSE' 2023-06-21T11:09:06,030 writing manifest file 'proteinshake.egg-info/SOURCES.txt' 2023-06-21T11:09:06,124 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-21T11:09:06,125 !! 2023-06-21T11:09:06,125 ******************************************************************************** 2023-06-21T11:09:06,126 Please avoid running ``setup.py`` directly. 2023-06-21T11:09:06,126 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-21T11:09:06,126 other standards-based tools. 2023-06-21T11:09:06,127 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-21T11:09:06,127 ******************************************************************************** 2023-06-21T11:09:06,128 !! 2023-06-21T11:09:06,128 self.initialize_options() 2023-06-21T11:09:06,196 installing to build/bdist.linux-armv7l/wheel 2023-06-21T11:09:06,197 running install 2023-06-21T11:09:06,257 running install_lib 2023-06-21T11:09:06,327 creating build/bdist.linux-armv7l 2023-06-21T11:09:06,329 creating build/bdist.linux-armv7l/wheel 2023-06-21T11:09:06,333 creating build/bdist.linux-armv7l/wheel/proteinshake 2023-06-21T11:09:06,337 creating build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,340 copying build/lib/proteinshake/frameworks/tf.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,344 copying build/lib/proteinshake/frameworks/dgl.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,349 copying build/lib/proteinshake/frameworks/torch.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,353 copying build/lib/proteinshake/frameworks/pyg.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,357 copying build/lib/proteinshake/frameworks/nx.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,362 copying build/lib/proteinshake/frameworks/dataset.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,366 copying build/lib/proteinshake/frameworks/np.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,370 copying build/lib/proteinshake/frameworks/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T11:09:06,375 creating build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T11:09:06,378 copying build/lib/proteinshake/transforms/transforms.py -> build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T11:09:06,382 copying build/lib/proteinshake/transforms/coords.py -> build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T11:09:06,386 copying build/lib/proteinshake/transforms/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T11:09:06,392 creating build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,395 copying build/lib/proteinshake/tasks/pfam_task.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,399 copying build/lib/proteinshake/tasks/binding_site_detection.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,403 copying build/lib/proteinshake/tasks/task.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,408 copying build/lib/proteinshake/tasks/ligand_affinity.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,412 copying build/lib/proteinshake/tasks/structural_class.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,417 copying build/lib/proteinshake/tasks/enzyme_class.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,421 copying build/lib/proteinshake/tasks/structure_search.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,425 copying build/lib/proteinshake/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,429 copying build/lib/proteinshake/tasks/protein_protein_interface.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,433 copying build/lib/proteinshake/tasks/gene_ontology.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,436 copying build/lib/proteinshake/tasks/structure_similarity.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T11:09:06,441 creating build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T11:09:06,443 copying build/lib/proteinshake/utils/uniprot.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T11:09:06,447 copying build/lib/proteinshake/utils/io.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T11:09:06,451 copying build/lib/proteinshake/utils/embeddings.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T11:09:06,455 copying build/lib/proteinshake/utils/similarity.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T11:09:06,458 copying build/lib/proteinshake/utils/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T11:09:06,463 creating build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,465 copying build/lib/proteinshake/datasets/tm_align.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,469 copying build/lib/proteinshake/datasets/enzyme_commission.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,473 copying build/lib/proteinshake/datasets/scop.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,477 copying build/lib/proteinshake/datasets/dataset.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,482 copying build/lib/proteinshake/datasets/rcsb.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,486 copying build/lib/proteinshake/datasets/alphafold.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,490 copying build/lib/proteinshake/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,494 copying build/lib/proteinshake/datasets/protein_family.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,497 copying build/lib/proteinshake/datasets/protein_ligand_interface.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,502 copying build/lib/proteinshake/datasets/protein_protein_interface.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,506 copying build/lib/proteinshake/datasets/gene_ontology.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T11:09:06,510 copying build/lib/proteinshake/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake 2023-06-21T11:09:06,515 creating build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T11:09:06,516 copying build/lib/proteinshake/representations/voxel.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T11:09:06,520 copying build/lib/proteinshake/representations/point.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T11:09:06,524 copying build/lib/proteinshake/representations/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T11:09:06,527 copying build/lib/proteinshake/representations/graph.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T11:09:06,532 creating build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,534 copying build/lib/tests/test_preprocess.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,538 copying build/lib/tests/test_datasets.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,542 copying build/lib/tests/test_transforms.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,545 copying build/lib/tests/test_frameworks.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,549 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,552 copying build/lib/tests/test_tasks.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T11:09:06,555 running install_egg_info 2023-06-21T11:09:06,639 Copying proteinshake.egg-info to build/bdist.linux-armv7l/wheel/proteinshake-0.3.12-py3.7.egg-info 2023-06-21T11:09:06,662 running install_scripts 2023-06-21T11:09:06,701 creating build/bdist.linux-armv7l/wheel/proteinshake-0.3.12.dist-info/WHEEL 2023-06-21T11:09:06,707 creating '/tmp/pip-wheel-t3dlt8_z/proteinshake-0.3.12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-21T11:09:06,711 adding 'proteinshake/__init__.py' 2023-06-21T11:09:06,715 adding 'proteinshake/datasets/__init__.py' 2023-06-21T11:09:06,718 adding 'proteinshake/datasets/alphafold.py' 2023-06-21T11:09:06,726 adding 'proteinshake/datasets/dataset.py' 2023-06-21T11:09:06,729 adding 'proteinshake/datasets/enzyme_commission.py' 2023-06-21T11:09:06,732 adding 'proteinshake/datasets/gene_ontology.py' 2023-06-21T11:09:06,735 adding 'proteinshake/datasets/protein_family.py' 2023-06-21T11:09:06,738 adding 'proteinshake/datasets/protein_ligand_interface.py' 2023-06-21T11:09:06,742 adding 'proteinshake/datasets/protein_protein_interface.py' 2023-06-21T11:09:06,746 adding 'proteinshake/datasets/rcsb.py' 2023-06-21T11:09:06,749 adding 'proteinshake/datasets/scop.py' 2023-06-21T11:09:06,752 adding 'proteinshake/datasets/tm_align.py' 2023-06-21T11:09:06,756 adding 'proteinshake/frameworks/__init__.py' 2023-06-21T11:09:06,759 adding 'proteinshake/frameworks/dataset.py' 2023-06-21T11:09:06,761 adding 'proteinshake/frameworks/dgl.py' 2023-06-21T11:09:06,764 adding 'proteinshake/frameworks/np.py' 2023-06-21T11:09:06,766 adding 'proteinshake/frameworks/nx.py' 2023-06-21T11:09:06,768 adding 'proteinshake/frameworks/pyg.py' 2023-06-21T11:09:06,771 adding 'proteinshake/frameworks/tf.py' 2023-06-21T11:09:06,773 adding 'proteinshake/frameworks/torch.py' 2023-06-21T11:09:06,776 adding 'proteinshake/representations/__init__.py' 2023-06-21T11:09:06,779 adding 'proteinshake/representations/graph.py' 2023-06-21T11:09:06,782 adding 'proteinshake/representations/point.py' 2023-06-21T11:09:06,786 adding 'proteinshake/representations/voxel.py' 2023-06-21T11:09:06,789 adding 'proteinshake/tasks/__init__.py' 2023-06-21T11:09:06,792 adding 'proteinshake/tasks/binding_site_detection.py' 2023-06-21T11:09:06,795 adding 'proteinshake/tasks/enzyme_class.py' 2023-06-21T11:09:06,798 adding 'proteinshake/tasks/gene_ontology.py' 2023-06-21T11:09:06,801 adding 'proteinshake/tasks/ligand_affinity.py' 2023-06-21T11:09:06,803 adding 'proteinshake/tasks/pfam_task.py' 2023-06-21T11:09:06,806 adding 'proteinshake/tasks/protein_protein_interface.py' 2023-06-21T11:09:06,809 adding 'proteinshake/tasks/structural_class.py' 2023-06-21T11:09:06,812 adding 'proteinshake/tasks/structure_search.py' 2023-06-21T11:09:06,815 adding 'proteinshake/tasks/structure_similarity.py' 2023-06-21T11:09:06,818 adding 'proteinshake/tasks/task.py' 2023-06-21T11:09:06,822 adding 'proteinshake/transforms/__init__.py' 2023-06-21T11:09:06,825 adding 'proteinshake/transforms/coords.py' 2023-06-21T11:09:06,827 adding 'proteinshake/transforms/transforms.py' 2023-06-21T11:09:06,831 adding 'proteinshake/utils/__init__.py' 2023-06-21T11:09:06,834 adding 'proteinshake/utils/embeddings.py' 2023-06-21T11:09:06,838 adding 'proteinshake/utils/io.py' 2023-06-21T11:09:06,840 adding 'proteinshake/utils/similarity.py' 2023-06-21T11:09:06,843 adding 'proteinshake/utils/uniprot.py' 2023-06-21T11:09:06,849 adding 'tests/__init__.py' 2023-06-21T11:09:06,851 adding 'tests/test_datasets.py' 2023-06-21T11:09:06,854 adding 'tests/test_frameworks.py' 2023-06-21T11:09:06,857 adding 'tests/test_preprocess.py' 2023-06-21T11:09:06,860 adding 'tests/test_tasks.py' 2023-06-21T11:09:06,862 adding 'tests/test_transforms.py' 2023-06-21T11:09:06,864 adding 'proteinshake-0.3.12.dist-info/LICENSE' 2023-06-21T11:09:06,867 adding 'proteinshake-0.3.12.dist-info/METADATA' 2023-06-21T11:09:06,869 adding 'proteinshake-0.3.12.dist-info/WHEEL' 2023-06-21T11:09:06,871 adding 'proteinshake-0.3.12.dist-info/top_level.txt' 2023-06-21T11:09:06,874 adding 'proteinshake-0.3.12.dist-info/RECORD' 2023-06-21T11:09:06,880 removing build/bdist.linux-armv7l/wheel 2023-06-21T11:09:07,066 Building wheel for proteinshake (setup.py): finished with status 'done' 2023-06-21T11:09:07,075 Created wheel for proteinshake: filename=proteinshake-0.3.12-py3-none-any.whl size=62584 sha256=f6d50b2d6e478a2a006ec3188efd6138ac8717e6f4b38d4c450fbb9b64f13add 2023-06-21T11:09:07,077 Stored in directory: /tmp/pip-ephem-wheel-cache-m068gbxv/wheels/43/77/20/7907067d92df3472d7edbf5c3a7f448e107723727eb88f87fc 2023-06-21T11:09:07,108 Successfully built proteinshake 2023-06-21T11:09:07,118 Removed build tracker: '/tmp/pip-build-tracker-npfnnvis'