2023-06-21T16:22:24,947 Created temporary directory: /tmp/pip-build-tracker-lodselij 2023-06-21T16:22:24,950 Initialized build tracking at /tmp/pip-build-tracker-lodselij 2023-06-21T16:22:24,951 Created build tracker: /tmp/pip-build-tracker-lodselij 2023-06-21T16:22:24,951 Entered build tracker: /tmp/pip-build-tracker-lodselij 2023-06-21T16:22:24,953 Created temporary directory: /tmp/pip-wheel-yy1zmrkg 2023-06-21T16:22:24,961 Created temporary directory: /tmp/pip-ephem-wheel-cache-4wvrazlr 2023-06-21T16:22:25,013 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-21T16:22:25,021 2 location(s) to search for versions of proteinshake: 2023-06-21T16:22:25,021 * https://pypi.org/simple/proteinshake/ 2023-06-21T16:22:25,021 * https://www.piwheels.org/simple/proteinshake/ 2023-06-21T16:22:25,022 Fetching project page and analyzing links: https://pypi.org/simple/proteinshake/ 2023-06-21T16:22:25,023 Getting page https://pypi.org/simple/proteinshake/ 2023-06-21T16:22:25,027 Found index url https://pypi.org/simple/ 2023-06-21T16:22:25,229 Fetched page https://pypi.org/simple/proteinshake/ as application/vnd.pypi.simple.v1+json 2023-06-21T16:22:25,242 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/a5/59/a8fe5ed6dd24b2ae0e1cb8fed33fcef955a43a2a20e95f3842fee0f858cf/proteinshake-0.0.1-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,244 Found link https://files.pythonhosted.org/packages/d1/d9/aa225eacb84eceb9ac0f658a924b4b1846eab7dae616ffc619d6ca89e564/proteinshake-0.0.1.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.0.1 2023-06-21T16:22:25,245 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/bb/7a/3ebc561a882754ecb77bde6bb92b5039e76fb31c9489bebea6efa159da36/proteinshake-0.0.2-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,246 Found link https://files.pythonhosted.org/packages/c9/53/f03b9179a868217082129e53c1d7c6ec25f0515762f1d657d827307a5454/proteinshake-0.0.2.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.0.2 2023-06-21T16:22:25,247 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/07/f3/43877c9feb864eb71d82be69d5621c5eba4073502c2f3d71fd902e4096b8/proteinshake-0.0.3-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,248 Found link https://files.pythonhosted.org/packages/67/ea/c47a75b89e64b30a2914cff747905a5a2123d88e03c1495ca3bf8a092399/proteinshake-0.0.3.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.0.3 2023-06-21T16:22:25,249 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/95/5b/9782a06ae177f359ae1292e39a954387d9453bd0ec76acfff729b9fe421d/proteinshake-0.1.0-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,250 Found link https://files.pythonhosted.org/packages/e0/f1/f707e6bb72c0b2ee8db52887640713f9724fdb35d4c193801bc5706f5de3/proteinshake-0.1.0.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.1.0 2023-06-21T16:22:25,251 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/52/be/25f55cbfc0d1cc1db86a2b7d55686a7418bcead4a66976fd0960a0781390/proteinshake-0.2.1-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,252 Found link https://files.pythonhosted.org/packages/7f/22/9732d068fb9427e5acf886c8c7e5fcb5095728fcbaa8558d0fd854f4eb4d/proteinshake-0.2.1.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.2.1 2023-06-21T16:22:25,253 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/79/f9/1520fb086bb98851fa6dfd505559f4ce9a3669500b159e10d53a424f7043/proteinshake-0.3.3-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,254 Found link https://files.pythonhosted.org/packages/15/21/2489347d94b9a7a4c0dbb08bf3e2de4e7e71ff814ea604b2f494f4e6c5d8/proteinshake-0.3.3.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.3 2023-06-21T16:22:25,255 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/3d/3c/a9ab30988a57e8abd37fe0bfcd92d72980e1b9b2b55e21df120eb4e4818a/proteinshake-0.3.7-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,256 Found link https://files.pythonhosted.org/packages/a7/5c/a60412a4d0fb8608a89d1c3599fbb123b031568b9159e27925a6f9b5dd04/proteinshake-0.3.7.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.7 2023-06-21T16:22:25,257 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/eb/04/df102757f20a5f73722d2f9406581400bdc86f6a0753201bcbda1dc33118/proteinshake-0.3.8-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,258 Found link https://files.pythonhosted.org/packages/f8/c4/cb58349aeaf80a33b8cd177d045ca8dd36c9b0b1e59d98c79146575bb55c/proteinshake-0.3.8.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.8 2023-06-21T16:22:25,259 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/01/af/0593993f9d8323bf71a5df53d105f4ed01d49c93781d627707aa761263eb/proteinshake-0.3.9-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,260 Found link https://files.pythonhosted.org/packages/01/f3/4ce96d888eabb6aab564caaf0fbd0b1047bf8faa4b8137849b659320b6a0/proteinshake-0.3.9.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.9 2023-06-21T16:22:25,261 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/e1/0e/6fdc82ab85f0529db584e8a3d1464aa02df2c085f2729c9017ef59edeea1/proteinshake-0.3.11-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,262 Found link https://files.pythonhosted.org/packages/69/53/6919d9d8e61d5d543436bc374299011ca3c116ab132f5ce3907b01f21607/proteinshake-0.3.11.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.11 2023-06-21T16:22:25,263 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/e5/7b/78b291ba18bd967e602e8e7f7431816cbc07625b4974e2172d7c8c0e8915/proteinshake-0.3.12-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,264 Found link https://files.pythonhosted.org/packages/ce/29/1958af783d06155fb671c63f56e46b832e90efd139915fa0dab3ba667ae5/proteinshake-0.3.12.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.12 2023-06-21T16:22:25,265 Skipping link: No binaries permitted for proteinshake: https://files.pythonhosted.org/packages/30/c7/0fcb736f144ca938cd1af39dea8943de7131039f8b5c044145959054c786/proteinshake-0.3.13-py3-none-any.whl (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,266 Found link https://files.pythonhosted.org/packages/c1/25/f1400a19667a8a41e316d8eee03f889c90ccd6082abcf8c9145ca9158c1e/proteinshake-0.3.13.tar.gz (from https://pypi.org/simple/proteinshake/) (requires-python:>=3.7), version: 0.3.13 2023-06-21T16:22:25,267 Fetching project page and analyzing links: https://www.piwheels.org/simple/proteinshake/ 2023-06-21T16:22:25,268 Getting page https://www.piwheels.org/simple/proteinshake/ 2023-06-21T16:22:25,270 Found index url https://www.piwheels.org/simple/ 2023-06-21T16:22:25,481 Fetched page https://www.piwheels.org/simple/proteinshake/ as text/html 2023-06-21T16:22:25,492 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.12-py3-none-any.whl#sha256=f6d50b2d6e478a2a006ec3188efd6138ac8717e6f4b38d4c450fbb9b64f13add (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,492 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.11-py3-none-any.whl#sha256=a9b200b5dcbb388c381aef741b709ceeb21e4416cee97ee76dd090e6320e5739 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,493 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.9-py3-none-any.whl#sha256=07b6fc8f9a64f3f25efc2d2b31ffe9e0774923f49d925baebe36eb9817390d77 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,493 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.8-py3-none-any.whl#sha256=95530a8ddcc0a495dae9a09363ab7f54c4650d51aa5a751b9619b117856ba60b (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,494 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.7-py3-none-any.whl#sha256=4a047fe2cabb3dd2405510f6a448a459ce21dc56292943f38eacefe758d857ce (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,494 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.3.3-py3-none-any.whl#sha256=2b7e9dee4e00e97000ac8e3988f6e1765bf8813585a033dbb7f37250ceceee33 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,495 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.2.1-py3-none-any.whl#sha256=ffb664ce6b8f319485e4c45923c8fd5ec5ea28f25611d7ff5dbda045e595c757 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,495 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.1.0-py3-none-any.whl#sha256=6a90c5ae85b54351a8a2dd7717c135bd1dd930a7a06fe0051ef2d1fa2b67b26a (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,496 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.0.3-py3-none-any.whl#sha256=addf8a16e17d0dd98bd6bc1b03586ba7481af3f8ee5596094ce3fe1e03ffec32 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,496 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.0.2-py3-none-any.whl#sha256=11984eccc77515359b725f992361aeef0df765aae3cd46bec2aa2367af5b0321 (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,497 Skipping link: No binaries permitted for proteinshake: https://www.piwheels.org/simple/proteinshake/proteinshake-0.0.1-py3-none-any.whl#sha256=5abc8558b18f8d5e528029101f497c433e7b36e840e3e43334be23eab679d13d (from https://www.piwheels.org/simple/proteinshake/) (requires-python:>=3.7) 2023-06-21T16:22:25,497 Skipping link: not a file: https://www.piwheels.org/simple/proteinshake/ 2023-06-21T16:22:25,498 Skipping link: not a file: https://pypi.org/simple/proteinshake/ 2023-06-21T16:22:25,534 Given no hashes to check 1 links for project 'proteinshake': discarding no candidates 2023-06-21T16:22:25,566 Collecting proteinshake==0.3.13 2023-06-21T16:22:25,570 Created temporary directory: /tmp/pip-unpack-kvo4vpr5 2023-06-21T16:22:25,760 Downloading proteinshake-0.3.13.tar.gz (43 kB) 2023-06-21T16:22:26,069 Added proteinshake==0.3.13 from https://files.pythonhosted.org/packages/c1/25/f1400a19667a8a41e316d8eee03f889c90ccd6082abcf8c9145ca9158c1e/proteinshake-0.3.13.tar.gz to build tracker '/tmp/pip-build-tracker-lodselij' 2023-06-21T16:22:26,073 Running setup.py (path:/tmp/pip-wheel-yy1zmrkg/proteinshake_3415273267404c419695255e6e0addd1/setup.py) egg_info for package proteinshake 2023-06-21T16:22:26,074 Created temporary directory: /tmp/pip-pip-egg-info-44djx02k 2023-06-21T16:22:26,075 Preparing metadata (setup.py): started 2023-06-21T16:22:26,077 Running command python setup.py egg_info 2023-06-21T16:22:27,681 running egg_info 2023-06-21T16:22:27,683 creating /tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info 2023-06-21T16:22:27,748 writing /tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/PKG-INFO 2023-06-21T16:22:27,753 writing dependency_links to /tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/dependency_links.txt 2023-06-21T16:22:27,758 writing requirements to /tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/requires.txt 2023-06-21T16:22:27,760 writing top-level names to /tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/top_level.txt 2023-06-21T16:22:27,763 writing manifest file '/tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/SOURCES.txt' 2023-06-21T16:22:27,980 reading manifest file '/tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/SOURCES.txt' 2023-06-21T16:22:27,983 adding license file 'LICENSE' 2023-06-21T16:22:27,992 writing manifest file '/tmp/pip-pip-egg-info-44djx02k/proteinshake.egg-info/SOURCES.txt' 2023-06-21T16:22:28,113 Preparing metadata (setup.py): finished with status 'done' 2023-06-21T16:22:28,127 Source in /tmp/pip-wheel-yy1zmrkg/proteinshake_3415273267404c419695255e6e0addd1 has version 0.3.13, which satisfies requirement proteinshake==0.3.13 from https://files.pythonhosted.org/packages/c1/25/f1400a19667a8a41e316d8eee03f889c90ccd6082abcf8c9145ca9158c1e/proteinshake-0.3.13.tar.gz 2023-06-21T16:22:28,128 Removed proteinshake==0.3.13 from https://files.pythonhosted.org/packages/c1/25/f1400a19667a8a41e316d8eee03f889c90ccd6082abcf8c9145ca9158c1e/proteinshake-0.3.13.tar.gz from build tracker '/tmp/pip-build-tracker-lodselij' 2023-06-21T16:22:28,145 Created temporary directory: /tmp/pip-unpack-80o5g7ye 2023-06-21T16:22:28,146 Building wheels for collected packages: proteinshake 2023-06-21T16:22:28,155 Created temporary directory: /tmp/pip-wheel-y9anmsxs 2023-06-21T16:22:28,156 Building wheel for proteinshake (setup.py): started 2023-06-21T16:22:28,158 Destination directory: /tmp/pip-wheel-y9anmsxs 2023-06-21T16:22:28,158 Running command python setup.py bdist_wheel 2023-06-21T16:22:29,825 running bdist_wheel 2023-06-21T16:22:30,523 running build 2023-06-21T16:22:30,524 running build_py 2023-06-21T16:22:30,597 creating build 2023-06-21T16:22:30,598 creating build/lib 2023-06-21T16:22:30,599 creating build/lib/proteinshake 2023-06-21T16:22:30,601 copying proteinshake/__init__.py -> build/lib/proteinshake 2023-06-21T16:22:30,607 creating build/lib/tests 2023-06-21T16:22:30,609 copying tests/test_preprocess.py -> build/lib/tests 2023-06-21T16:22:30,614 copying tests/test_datasets.py -> build/lib/tests 2023-06-21T16:22:30,618 copying tests/test_transforms.py -> build/lib/tests 2023-06-21T16:22:30,622 copying tests/test_frameworks.py -> build/lib/tests 2023-06-21T16:22:30,626 copying tests/__init__.py -> build/lib/tests 2023-06-21T16:22:30,629 copying tests/test_tasks.py -> build/lib/tests 2023-06-21T16:22:30,635 creating build/lib/proteinshake/frameworks 2023-06-21T16:22:30,637 copying proteinshake/frameworks/tf.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,642 copying proteinshake/frameworks/dgl.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,645 copying proteinshake/frameworks/torch.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,649 copying proteinshake/frameworks/pyg.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,653 copying proteinshake/frameworks/nx.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,657 copying proteinshake/frameworks/dataset.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,662 copying proteinshake/frameworks/np.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,666 copying proteinshake/frameworks/__init__.py -> build/lib/proteinshake/frameworks 2023-06-21T16:22:30,671 creating build/lib/proteinshake/transforms 2023-06-21T16:22:30,673 copying proteinshake/transforms/transforms.py -> build/lib/proteinshake/transforms 2023-06-21T16:22:30,677 copying proteinshake/transforms/coords.py -> build/lib/proteinshake/transforms 2023-06-21T16:22:30,680 copying proteinshake/transforms/__init__.py -> build/lib/proteinshake/transforms 2023-06-21T16:22:30,686 creating build/lib/proteinshake/tasks 2023-06-21T16:22:30,688 copying proteinshake/tasks/pfam_task.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,693 copying proteinshake/tasks/binding_site_detection.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,697 copying proteinshake/tasks/task.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,702 copying proteinshake/tasks/dummy.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,706 copying proteinshake/tasks/ligand_affinity.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,710 copying proteinshake/tasks/structural_class.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,714 copying proteinshake/tasks/enzyme_class.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,718 copying proteinshake/tasks/structure_search.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,721 copying proteinshake/tasks/__init__.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,725 copying proteinshake/tasks/protein_protein_interface.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,729 copying proteinshake/tasks/gene_ontology.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,733 copying proteinshake/tasks/structure_similarity.py -> build/lib/proteinshake/tasks 2023-06-21T16:22:30,738 creating build/lib/proteinshake/utils 2023-06-21T16:22:30,740 copying proteinshake/utils/uniprot.py -> build/lib/proteinshake/utils 2023-06-21T16:22:30,745 copying proteinshake/utils/io.py -> build/lib/proteinshake/utils 2023-06-21T16:22:30,749 copying proteinshake/utils/embeddings.py -> build/lib/proteinshake/utils 2023-06-21T16:22:30,753 copying proteinshake/utils/similarity.py -> build/lib/proteinshake/utils 2023-06-21T16:22:30,757 copying proteinshake/utils/__init__.py -> build/lib/proteinshake/utils 2023-06-21T16:22:30,763 creating build/lib/proteinshake/datasets 2023-06-21T16:22:30,765 copying proteinshake/datasets/tm_align.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,770 copying proteinshake/datasets/enzyme_commission.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,774 copying proteinshake/datasets/scop.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,778 copying proteinshake/datasets/dataset.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,784 copying proteinshake/datasets/rcsb.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,788 copying proteinshake/datasets/alphafold.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,792 copying proteinshake/datasets/__init__.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,796 copying proteinshake/datasets/protein_family.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,800 copying proteinshake/datasets/protein_ligand_interface.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,805 copying proteinshake/datasets/protein_protein_interface.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,810 copying proteinshake/datasets/gene_ontology.py -> build/lib/proteinshake/datasets 2023-06-21T16:22:30,815 creating build/lib/proteinshake/representations 2023-06-21T16:22:30,817 copying proteinshake/representations/voxel.py -> build/lib/proteinshake/representations 2023-06-21T16:22:30,822 copying proteinshake/representations/point.py -> build/lib/proteinshake/representations 2023-06-21T16:22:30,825 copying proteinshake/representations/__init__.py -> build/lib/proteinshake/representations 2023-06-21T16:22:30,829 copying proteinshake/representations/graph.py -> build/lib/proteinshake/representations 2023-06-21T16:22:30,832 running egg_info 2023-06-21T16:22:30,981 writing proteinshake.egg-info/PKG-INFO 2023-06-21T16:22:30,985 writing dependency_links to proteinshake.egg-info/dependency_links.txt 2023-06-21T16:22:30,989 writing requirements to proteinshake.egg-info/requires.txt 2023-06-21T16:22:30,992 writing top-level names to proteinshake.egg-info/top_level.txt 2023-06-21T16:22:31,075 reading manifest file 'proteinshake.egg-info/SOURCES.txt' 2023-06-21T16:22:31,082 adding license file 'LICENSE' 2023-06-21T16:22:31,093 writing manifest file 'proteinshake.egg-info/SOURCES.txt' 2023-06-21T16:22:31,183 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-21T16:22:31,184 !! 2023-06-21T16:22:31,185 ******************************************************************************** 2023-06-21T16:22:31,185 Please avoid running ``setup.py`` directly. 2023-06-21T16:22:31,185 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-21T16:22:31,186 other standards-based tools. 2023-06-21T16:22:31,187 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-21T16:22:31,187 ******************************************************************************** 2023-06-21T16:22:31,187 !! 2023-06-21T16:22:31,188 self.initialize_options() 2023-06-21T16:22:31,250 installing to build/bdist.linux-armv7l/wheel 2023-06-21T16:22:31,251 running install 2023-06-21T16:22:31,311 running install_lib 2023-06-21T16:22:31,379 creating build/bdist.linux-armv7l 2023-06-21T16:22:31,380 creating build/bdist.linux-armv7l/wheel 2023-06-21T16:22:31,384 creating build/bdist.linux-armv7l/wheel/proteinshake 2023-06-21T16:22:31,387 creating build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,389 copying build/lib/proteinshake/frameworks/tf.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,393 copying build/lib/proteinshake/frameworks/dgl.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,397 copying build/lib/proteinshake/frameworks/torch.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,401 copying build/lib/proteinshake/frameworks/pyg.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,405 copying build/lib/proteinshake/frameworks/nx.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,408 copying build/lib/proteinshake/frameworks/dataset.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,412 copying build/lib/proteinshake/frameworks/np.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,416 copying build/lib/proteinshake/frameworks/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/frameworks 2023-06-21T16:22:31,421 creating build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T16:22:31,422 copying build/lib/proteinshake/transforms/transforms.py -> build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T16:22:31,426 copying build/lib/proteinshake/transforms/coords.py -> build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T16:22:31,430 copying build/lib/proteinshake/transforms/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/transforms 2023-06-21T16:22:31,435 creating build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,437 copying build/lib/proteinshake/tasks/pfam_task.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,441 copying build/lib/proteinshake/tasks/binding_site_detection.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,445 copying build/lib/proteinshake/tasks/task.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,449 copying build/lib/proteinshake/tasks/dummy.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,453 copying build/lib/proteinshake/tasks/ligand_affinity.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,456 copying build/lib/proteinshake/tasks/structural_class.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,460 copying build/lib/proteinshake/tasks/enzyme_class.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,464 copying build/lib/proteinshake/tasks/structure_search.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,468 copying build/lib/proteinshake/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,472 copying build/lib/proteinshake/tasks/protein_protein_interface.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,476 copying build/lib/proteinshake/tasks/gene_ontology.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,480 copying build/lib/proteinshake/tasks/structure_similarity.py -> build/bdist.linux-armv7l/wheel/proteinshake/tasks 2023-06-21T16:22:31,484 creating build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T16:22:31,486 copying build/lib/proteinshake/utils/uniprot.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T16:22:31,490 copying build/lib/proteinshake/utils/io.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T16:22:31,494 copying build/lib/proteinshake/utils/embeddings.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T16:22:31,498 copying build/lib/proteinshake/utils/similarity.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T16:22:31,501 copying build/lib/proteinshake/utils/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/utils 2023-06-21T16:22:31,506 creating build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,507 copying build/lib/proteinshake/datasets/tm_align.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,513 copying build/lib/proteinshake/datasets/enzyme_commission.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,516 copying build/lib/proteinshake/datasets/scop.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,520 copying build/lib/proteinshake/datasets/dataset.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,525 copying build/lib/proteinshake/datasets/rcsb.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,529 copying build/lib/proteinshake/datasets/alphafold.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,534 copying build/lib/proteinshake/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,537 copying build/lib/proteinshake/datasets/protein_family.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,540 copying build/lib/proteinshake/datasets/protein_ligand_interface.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,545 copying build/lib/proteinshake/datasets/protein_protein_interface.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,549 copying build/lib/proteinshake/datasets/gene_ontology.py -> build/bdist.linux-armv7l/wheel/proteinshake/datasets 2023-06-21T16:22:31,553 copying build/lib/proteinshake/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake 2023-06-21T16:22:31,557 creating build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T16:22:31,559 copying build/lib/proteinshake/representations/voxel.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T16:22:31,564 copying build/lib/proteinshake/representations/point.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T16:22:31,567 copying build/lib/proteinshake/representations/__init__.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T16:22:31,571 copying build/lib/proteinshake/representations/graph.py -> build/bdist.linux-armv7l/wheel/proteinshake/representations 2023-06-21T16:22:31,575 creating build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,577 copying build/lib/tests/test_preprocess.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,582 copying build/lib/tests/test_datasets.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,586 copying build/lib/tests/test_transforms.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,589 copying build/lib/tests/test_frameworks.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,593 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,596 copying build/lib/tests/test_tasks.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-21T16:22:31,600 running install_egg_info 2023-06-21T16:22:31,675 Copying proteinshake.egg-info to build/bdist.linux-armv7l/wheel/proteinshake-0.3.13-py3.7.egg-info 2023-06-21T16:22:31,695 running install_scripts 2023-06-21T16:22:31,732 creating build/bdist.linux-armv7l/wheel/proteinshake-0.3.13.dist-info/WHEEL 2023-06-21T16:22:31,737 creating '/tmp/pip-wheel-y9anmsxs/proteinshake-0.3.13-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-21T16:22:31,742 adding 'proteinshake/__init__.py' 2023-06-21T16:22:31,746 adding 'proteinshake/datasets/__init__.py' 2023-06-21T16:22:31,750 adding 'proteinshake/datasets/alphafold.py' 2023-06-21T16:22:31,757 adding 'proteinshake/datasets/dataset.py' 2023-06-21T16:22:31,760 adding 'proteinshake/datasets/enzyme_commission.py' 2023-06-21T16:22:31,763 adding 'proteinshake/datasets/gene_ontology.py' 2023-06-21T16:22:31,766 adding 'proteinshake/datasets/protein_family.py' 2023-06-21T16:22:31,770 adding 'proteinshake/datasets/protein_ligand_interface.py' 2023-06-21T16:22:31,774 adding 'proteinshake/datasets/protein_protein_interface.py' 2023-06-21T16:22:31,777 adding 'proteinshake/datasets/rcsb.py' 2023-06-21T16:22:31,780 adding 'proteinshake/datasets/scop.py' 2023-06-21T16:22:31,784 adding 'proteinshake/datasets/tm_align.py' 2023-06-21T16:22:31,788 adding 'proteinshake/frameworks/__init__.py' 2023-06-21T16:22:31,791 adding 'proteinshake/frameworks/dataset.py' 2023-06-21T16:22:31,793 adding 'proteinshake/frameworks/dgl.py' 2023-06-21T16:22:31,796 adding 'proteinshake/frameworks/np.py' 2023-06-21T16:22:31,798 adding 'proteinshake/frameworks/nx.py' 2023-06-21T16:22:31,801 adding 'proteinshake/frameworks/pyg.py' 2023-06-21T16:22:31,803 adding 'proteinshake/frameworks/tf.py' 2023-06-21T16:22:31,806 adding 'proteinshake/frameworks/torch.py' 2023-06-21T16:22:31,809 adding 'proteinshake/representations/__init__.py' 2023-06-21T16:22:31,812 adding 'proteinshake/representations/graph.py' 2023-06-21T16:22:31,815 adding 'proteinshake/representations/point.py' 2023-06-21T16:22:31,818 adding 'proteinshake/representations/voxel.py' 2023-06-21T16:22:31,822 adding 'proteinshake/tasks/__init__.py' 2023-06-21T16:22:31,825 adding 'proteinshake/tasks/binding_site_detection.py' 2023-06-21T16:22:31,827 adding 'proteinshake/tasks/dummy.py' 2023-06-21T16:22:31,830 adding 'proteinshake/tasks/enzyme_class.py' 2023-06-21T16:22:31,833 adding 'proteinshake/tasks/gene_ontology.py' 2023-06-21T16:22:31,836 adding 'proteinshake/tasks/ligand_affinity.py' 2023-06-21T16:22:31,838 adding 'proteinshake/tasks/pfam_task.py' 2023-06-21T16:22:31,842 adding 'proteinshake/tasks/protein_protein_interface.py' 2023-06-21T16:22:31,844 adding 'proteinshake/tasks/structural_class.py' 2023-06-21T16:22:31,847 adding 'proteinshake/tasks/structure_search.py' 2023-06-21T16:22:31,850 adding 'proteinshake/tasks/structure_similarity.py' 2023-06-21T16:22:31,854 adding 'proteinshake/tasks/task.py' 2023-06-21T16:22:31,857 adding 'proteinshake/transforms/__init__.py' 2023-06-21T16:22:31,860 adding 'proteinshake/transforms/coords.py' 2023-06-21T16:22:31,863 adding 'proteinshake/transforms/transforms.py' 2023-06-21T16:22:31,866 adding 'proteinshake/utils/__init__.py' 2023-06-21T16:22:31,869 adding 'proteinshake/utils/embeddings.py' 2023-06-21T16:22:31,873 adding 'proteinshake/utils/io.py' 2023-06-21T16:22:31,876 adding 'proteinshake/utils/similarity.py' 2023-06-21T16:22:31,879 adding 'proteinshake/utils/uniprot.py' 2023-06-21T16:22:31,884 adding 'tests/__init__.py' 2023-06-21T16:22:31,887 adding 'tests/test_datasets.py' 2023-06-21T16:22:31,890 adding 'tests/test_frameworks.py' 2023-06-21T16:22:31,893 adding 'tests/test_preprocess.py' 2023-06-21T16:22:31,896 adding 'tests/test_tasks.py' 2023-06-21T16:22:31,898 adding 'tests/test_transforms.py' 2023-06-21T16:22:31,901 adding 'proteinshake-0.3.13.dist-info/LICENSE' 2023-06-21T16:22:31,903 adding 'proteinshake-0.3.13.dist-info/METADATA' 2023-06-21T16:22:31,905 adding 'proteinshake-0.3.13.dist-info/WHEEL' 2023-06-21T16:22:31,907 adding 'proteinshake-0.3.13.dist-info/top_level.txt' 2023-06-21T16:22:31,911 adding 'proteinshake-0.3.13.dist-info/RECORD' 2023-06-21T16:22:31,916 removing build/bdist.linux-armv7l/wheel 2023-06-21T16:22:32,100 Building wheel for proteinshake (setup.py): finished with status 'done' 2023-06-21T16:22:32,109 Created wheel for proteinshake: filename=proteinshake-0.3.13-py3-none-any.whl size=62978 sha256=0c9d22d2d077aa5335e36a9abd8e2cca9556bf2fdac3a97d6dc9fb6f7ff9d518 2023-06-21T16:22:32,112 Stored in directory: /tmp/pip-ephem-wheel-cache-4wvrazlr/wheels/f5/0c/45/ca73db0fd3e2307333ad8292581bb982bdf67aa05a99847b97 2023-06-21T16:22:32,143 Successfully built proteinshake 2023-06-21T16:22:32,154 Removed build tracker: '/tmp/pip-build-tracker-lodselij'