2023-06-22T14:39:55,585 Created temporary directory: /tmp/pip-build-tracker-22o2nm5p 2023-06-22T14:39:55,587 Initialized build tracking at /tmp/pip-build-tracker-22o2nm5p 2023-06-22T14:39:55,588 Created build tracker: /tmp/pip-build-tracker-22o2nm5p 2023-06-22T14:39:55,588 Entered build tracker: /tmp/pip-build-tracker-22o2nm5p 2023-06-22T14:39:55,589 Created temporary directory: /tmp/pip-wheel-e4rv0pap 2023-06-22T14:39:55,598 Created temporary directory: /tmp/pip-ephem-wheel-cache-djleaieu 2023-06-22T14:39:55,651 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-22T14:39:55,659 2 location(s) to search for versions of ngpiris: 2023-06-22T14:39:55,659 * https://pypi.org/simple/ngpiris/ 2023-06-22T14:39:55,659 * https://www.piwheels.org/simple/ngpiris/ 2023-06-22T14:39:55,660 Fetching project page and analyzing links: https://pypi.org/simple/ngpiris/ 2023-06-22T14:39:55,661 Getting page https://pypi.org/simple/ngpiris/ 2023-06-22T14:39:55,666 Found index url https://pypi.org/simple/ 2023-06-22T14:39:55,858 Fetched page https://pypi.org/simple/ngpiris/ as application/vnd.pypi.simple.v1+json 2023-06-22T14:39:55,870 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/4d/6e/f08727e739b7a54f7449ab02313eb50cabb2a795c92f253cf17f18c75617/NGPIris-3.0.0-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,872 Found link https://files.pythonhosted.org/packages/78/19/bf5cc9159ce9a268be187a5bddf2544732e150c403caaba9bb72031a6d38/NGPIris-3.0.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.0.0 2023-06-22T14:39:55,873 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/a1/28/41151a5e1b5f39a800959d061e7f95eaa000ec0f590194b904e8174d850b/NGPIris-3.0.1-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,874 Found link https://files.pythonhosted.org/packages/6f/3e/43198b86cf36f8cb67292f40fde6f413df7b7a3712292985f0c9825e685b/NGPIris-3.0.1.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.0.1 2023-06-22T14:39:55,875 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/19/f3/6b1617929c5001e2cff89989a25184e8027a613f0999f263c987a07ca753/NGPIris-3.0.2-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,876 Found link https://files.pythonhosted.org/packages/bb/d2/aad6af2472bf44ece65bf403e0a7c9b40f7e899967e196fd53f26825b4b8/NGPIris-3.0.2.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.0.2 2023-06-22T14:39:55,877 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/ae/54/d7573467205bc7e14294a954def7f8c2194be848c6324ddfc1698b34017b/NGPIris-3.0.3-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,878 Found link https://files.pythonhosted.org/packages/b3/61/71f9236acb7b62ce74a0bb298ebdf34cf03792730a70f1aef8522ad9b6b4/NGPIris-3.0.3.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.0.3 2023-06-22T14:39:55,879 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/a5/9a/addadfcc2e15874ed368c96636b0364efb4c66d03325cdf759e846bf7535/NGPIris-3.2.0-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,880 Found link https://files.pythonhosted.org/packages/54/e0/4c980696e9d9ba08080acdb2fd9c10c5e2f91a9e9c637c05d16445d3885d/NGPIris-3.2.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.2.0 2023-06-22T14:39:55,881 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/e3/7c/f979667a67fcb64cc5f95350857bd8e23f41737c5258bd7adda601a6bcfd/NGPIris-3.4.0-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,882 Found link https://files.pythonhosted.org/packages/76/a0/0588bac324aa12b00f07b6f9908d0bbfa93ec2961cfaf43a25d2b03f417a/NGPIris-3.4.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.4.0 2023-06-22T14:39:55,883 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/48/39/46d2cc57267af9da79f26acf2fadb712b2241080ff7f05e10919b94e2e9e/NGPIris-3.4.3-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,884 Found link https://files.pythonhosted.org/packages/58/6c/b015ab5bc06ec4d827cde658e67d16da46f16f91a1c645ea93a2391e4801/NGPIris-3.4.3.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.4.3 2023-06-22T14:39:55,885 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/31/90/cc8020a6d267339b1dcfa92d7c2290871e5affa81ac3eeca7983ae0ea696/NGPIris-3.4.5-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,886 Found link https://files.pythonhosted.org/packages/d3/12/938ecca558cbab1d59d09d84ebcb3eed332b393f765729f0a17663e15e47/NGPIris-3.4.5.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.4.5 2023-06-22T14:39:55,886 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/06/d6/34055477d5dbd32c3bf419f4f1aa6fff245ba21ba57c86b6914894968fcd/NGPIris-3.4.8-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,888 Found link https://files.pythonhosted.org/packages/f7/db/171f09ab48499129d6f0f4e6d75149dbca99550b4822a99848414d1235c7/NGPIris-3.4.8.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 3.4.8 2023-06-22T14:39:55,889 Found link https://files.pythonhosted.org/packages/88/e1/77c334e7c72936f168c8003e80dd7c34359959379aac4a220eb9cfc42be0/NGPIris-4.0.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 4.0.0 2023-06-22T14:39:55,890 Found link https://files.pythonhosted.org/packages/a8/0a/5be2fcffc753c011fb7ca46b4b85885fcf0ce84016185ad5d0fdd0e9d346/NGPIris-4.0.1.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 4.0.1 2023-06-22T14:39:55,892 Found link https://files.pythonhosted.org/packages/11/ea/29ecef9a200c7244bd0ecb4178bf31278e500681d3ed2234f4d1b394a727/NGPIris-4.1.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 4.1.0 2023-06-22T14:39:55,893 Found link https://files.pythonhosted.org/packages/be/64/8d6d5163a5e6379f0975e8a7a5d7fea1b308329cf04defa87541a5144d40/NGPIris-4.2.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 4.2.0 2023-06-22T14:39:55,894 Skipping link: No binaries permitted for ngpiris: https://files.pythonhosted.org/packages/1b/fa/e9ae86b4ec52d176b3690aac5cf725076eb67894b904596ad48b29d20cbe/NGPIris-4.3.0-py3-none-any.whl (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:55,895 Found link https://files.pythonhosted.org/packages/ed/eb/05dfd7fcc7d79d805c39635b819239ab4a0eacf1303352c9c39d2dd51a2d/NGPIris-4.3.0.tar.gz (from https://pypi.org/simple/ngpiris/) (requires-python:>=3.6), version: 4.3.0 2023-06-22T14:39:55,896 Fetching project page and analyzing links: https://www.piwheels.org/simple/ngpiris/ 2023-06-22T14:39:55,897 Getting page https://www.piwheels.org/simple/ngpiris/ 2023-06-22T14:39:55,899 Found index url https://www.piwheels.org/simple/ 2023-06-22T14:39:56,122 Fetched page https://www.piwheels.org/simple/ngpiris/ as text/html 2023-06-22T14:39:56,134 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-4.2.0-py3-none-any.whl#sha256=996091bd85b7851e9cb4853f6666118085eb8336655c7c559dc0ae5024646a36 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,135 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-4.1.0-py3-none-any.whl#sha256=6d3d7a5402690c39b5c4c62436861135cf1debd77396302b5ff7ab26c19db4ae (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,135 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-4.0.1-py3-none-any.whl#sha256=27f4612d2b8e55c501d1b0d184db6051438e11e1c34a8c7ce802f5198d07430d (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,136 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-4.0.0-py3-none-any.whl#sha256=c2c248431653bc75ec4b9309e8147c0dc95a7f691a36cfcab6476d56d07b9b93 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,136 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.4.8-py3-none-any.whl#sha256=6d5c467d91f4a078774067564ee465935ff2fdfed4110db75eb5ade851138b1e (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,137 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.4.5-py3-none-any.whl#sha256=25fe84f5af43720363d8235d6cb9b0f4300220f95e41ccd0d4712e9d9901874c (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,137 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.4.3-py3-none-any.whl#sha256=bcafb399a8ea27aa1ffd6b4ecad46be12868946bbccb4d65ac190ddb24ff94f1 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,138 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.4.0-py3-none-any.whl#sha256=a6ebd0e230567c71827dc2d3c2cf00fb1a9ecc0d9e88d0f2f72d381c9b714b74 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,138 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.2.0-py3-none-any.whl#sha256=570205a5723cadf5283b876e9660252c2f2aeee83a926924290b1b405b5063b2 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,139 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.0.3-py3-none-any.whl#sha256=7f5bdd637e2f76d2556e053a6419f22bcf55f1c701f85a25f2d6d2242316d5d1 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,139 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.0.2-py3-none-any.whl#sha256=c641248d1cd745848e1e17172315e26d9a5b1f285d82e00a13c828d2df52a42b (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,140 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.0.1-py3-none-any.whl#sha256=0e81c3cfead2a48f830959ae216820ff0fbca5855dbcf688bd2f48315be72860 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,140 Skipping link: No binaries permitted for ngpiris: https://www.piwheels.org/simple/ngpiris/NGPIris-3.0.0-py3-none-any.whl#sha256=c1e03dfb87bc818cd85e79c209f4472232fd2ebfff1ba7dc03bae3cdaf9bd233 (from https://www.piwheels.org/simple/ngpiris/) (requires-python:>=3.6) 2023-06-22T14:39:56,141 Skipping link: not a file: https://www.piwheels.org/simple/ngpiris/ 2023-06-22T14:39:56,141 Skipping link: not a file: https://pypi.org/simple/ngpiris/ 2023-06-22T14:39:56,178 Given no hashes to check 1 links for project 'ngpiris': discarding no candidates 2023-06-22T14:39:56,214 Collecting ngpiris==4.3.0 2023-06-22T14:39:56,218 Created temporary directory: /tmp/pip-unpack-valbwprg 2023-06-22T14:39:56,419 Downloading NGPIris-4.3.0.tar.gz (72 kB) 2023-06-22T14:39:56,663 Added ngpiris==4.3.0 from https://files.pythonhosted.org/packages/ed/eb/05dfd7fcc7d79d805c39635b819239ab4a0eacf1303352c9c39d2dd51a2d/NGPIris-4.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-22o2nm5p' 2023-06-22T14:39:56,672 Created temporary directory: /tmp/pip-build-env-7zs5zz8t 2023-06-22T14:39:56,692 Installing build dependencies: started 2023-06-22T14:39:56,695 Running command pip subprocess to install build dependencies 2023-06-22T14:39:59,440 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-06-22T14:40:00,236 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-22T14:40:04,260 Collecting setuptools>=42 2023-06-22T14:40:04,444 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-06-22T14:40:05,069 Collecting wheel 2023-06-22T14:40:05,110 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-06-22T14:40:10,082 Installing collected packages: wheel, setuptools 2023-06-22T14:40:10,544 Creating /tmp/pip-build-env-7zs5zz8t/overlay/bin 2023-06-22T14:40:10,549 changing mode of /tmp/pip-build-env-7zs5zz8t/overlay/bin/wheel to 755 2023-06-22T14:40:14,762 Successfully installed setuptools-68.0.0 wheel-0.40.0 2023-06-22T14:40:15,218 Installing build dependencies: finished with status 'done' 2023-06-22T14:40:15,229 Getting requirements to build wheel: started 2023-06-22T14:40:15,231 Running command Getting requirements to build wheel 2023-06-22T14:40:17,342 running egg_info 2023-06-22T14:40:17,352 writing NGPIris.egg-info/PKG-INFO 2023-06-22T14:40:17,356 writing dependency_links to NGPIris.egg-info/dependency_links.txt 2023-06-22T14:40:17,359 writing entry points to NGPIris.egg-info/entry_points.txt 2023-06-22T14:40:17,362 writing requirements to NGPIris.egg-info/requires.txt 2023-06-22T14:40:17,365 writing top-level names to NGPIris.egg-info/top_level.txt 2023-06-22T14:40:17,409 reading manifest file 'NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:17,415 reading manifest template 'MANIFEST.in' 2023-06-22T14:40:17,417 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `requires-python` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:17,418 !! 2023-06-22T14:40:17,419 ******************************************************************************** 2023-06-22T14:40:17,419 ########################################################################## 2023-06-22T14:40:17,420 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:17,420 ########################################################################## 2023-06-22T14:40:17,421 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:17,422 `requires-python = '>=3.6'` 2023-06-22T14:40:17,423 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:17,423 consider this value unless `requires-python` is listed as `dynamic`. 2023-06-22T14:40:17,424 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:17,425 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:17,425 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:17,425 follow strictly the standard. 2023-06-22T14:40:17,426 To prevent this warning, you can list `requires-python` under `dynamic` or alternatively 2023-06-22T14:40:17,427 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:17,427 configuration. 2023-06-22T14:40:17,428 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:17,428 or your builds will no longer be supported. 2023-06-22T14:40:17,429 ******************************************************************************** 2023-06-22T14:40:17,429 !! 2023-06-22T14:40:17,430 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:17,430 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `classifiers` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:17,430 !! 2023-06-22T14:40:17,431 ******************************************************************************** 2023-06-22T14:40:17,431 ########################################################################## 2023-06-22T14:40:17,432 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:17,432 ########################################################################## 2023-06-22T14:40:17,432 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:17,433 `classifiers = ['Programming Language :: Python :: 3', 'License :: OSI Approved :: GNU General Public License v2 (GPLv2)', 'Operating System :: OS Independent']` 2023-06-22T14:40:17,434 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:17,434 consider this value unless `classifiers` is listed as `dynamic`. 2023-06-22T14:40:17,435 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:17,435 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:17,435 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:17,436 follow strictly the standard. 2023-06-22T14:40:17,436 To prevent this warning, you can list `classifiers` under `dynamic` or alternatively 2023-06-22T14:40:17,437 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:17,437 configuration. 2023-06-22T14:40:17,437 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:17,438 or your builds will no longer be supported. 2023-06-22T14:40:17,438 ******************************************************************************** 2023-06-22T14:40:17,439 !! 2023-06-22T14:40:17,439 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:17,439 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `urls` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:17,440 !! 2023-06-22T14:40:17,441 ******************************************************************************** 2023-06-22T14:40:17,441 ########################################################################## 2023-06-22T14:40:17,441 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:17,442 ########################################################################## 2023-06-22T14:40:17,443 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:17,443 `urls = {'Bug Tracker': 'https://github.com/genomic-medicine-sweden/NGPIris/issues'}` 2023-06-22T14:40:17,444 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:17,444 consider this value unless `urls` is listed as `dynamic`. 2023-06-22T14:40:17,447 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:17,448 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:17,448 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:17,449 follow strictly the standard. 2023-06-22T14:40:17,449 To prevent this warning, you can list `urls` under `dynamic` or alternatively 2023-06-22T14:40:17,450 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:17,450 configuration. 2023-06-22T14:40:17,451 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:17,452 or your builds will no longer be supported. 2023-06-22T14:40:17,452 ******************************************************************************** 2023-06-22T14:40:17,453 !! 2023-06-22T14:40:17,453 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:17,454 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:17,454 !! 2023-06-22T14:40:17,455 ******************************************************************************** 2023-06-22T14:40:17,456 ########################################################################## 2023-06-22T14:40:17,456 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:17,457 ########################################################################## 2023-06-22T14:40:17,457 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:17,458 `dependencies = ['boto3>=1.12.34', 'click>=7.1.2', 'requests>=2.25.0']` 2023-06-22T14:40:17,459 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:17,459 consider this value unless `dependencies` is listed as `dynamic`. 2023-06-22T14:40:17,460 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:17,461 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:17,461 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:17,462 follow strictly the standard. 2023-06-22T14:40:17,463 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2023-06-22T14:40:17,463 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:17,463 configuration. 2023-06-22T14:40:17,464 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:17,464 or your builds will no longer be supported. 2023-06-22T14:40:17,465 ******************************************************************************** 2023-06-22T14:40:17,466 !! 2023-06-22T14:40:17,466 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:17,466 warning: no files found matching 'freeze.txt' 2023-06-22T14:40:17,467 warning: no files found matching 'profile.json' 2023-06-22T14:40:17,467 adding license file 'LICENSE' 2023-06-22T14:40:17,468 writing manifest file 'NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:17,621 Getting requirements to build wheel: finished with status 'done' 2023-06-22T14:40:17,640 Created temporary directory: /tmp/pip-modern-metadata-_uggvis6 2023-06-22T14:40:17,646 Preparing metadata (pyproject.toml): started 2023-06-22T14:40:17,650 Running command Preparing metadata (pyproject.toml) 2023-06-22T14:40:19,535 running dist_info 2023-06-22T14:40:19,551 creating /tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info 2023-06-22T14:40:19,560 writing /tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/PKG-INFO 2023-06-22T14:40:19,567 writing dependency_links to /tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/dependency_links.txt 2023-06-22T14:40:19,570 writing entry points to /tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/entry_points.txt 2023-06-22T14:40:19,573 writing requirements to /tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/requires.txt 2023-06-22T14:40:19,575 writing top-level names to /tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/top_level.txt 2023-06-22T14:40:19,578 writing manifest file '/tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:19,618 reading manifest file '/tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:19,623 reading manifest template 'MANIFEST.in' 2023-06-22T14:40:19,626 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `requires-python` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:19,626 !! 2023-06-22T14:40:19,627 ******************************************************************************** 2023-06-22T14:40:19,627 ########################################################################## 2023-06-22T14:40:19,628 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:19,628 ########################################################################## 2023-06-22T14:40:19,629 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:19,630 `requires-python = '>=3.6'` 2023-06-22T14:40:19,631 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:19,631 consider this value unless `requires-python` is listed as `dynamic`. 2023-06-22T14:40:19,632 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:19,633 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:19,634 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:19,634 follow strictly the standard. 2023-06-22T14:40:19,635 To prevent this warning, you can list `requires-python` under `dynamic` or alternatively 2023-06-22T14:40:19,635 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:19,636 configuration. 2023-06-22T14:40:19,636 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:19,637 or your builds will no longer be supported. 2023-06-22T14:40:19,637 ******************************************************************************** 2023-06-22T14:40:19,638 !! 2023-06-22T14:40:19,638 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:19,638 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `classifiers` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:19,638 !! 2023-06-22T14:40:19,639 ******************************************************************************** 2023-06-22T14:40:19,639 ########################################################################## 2023-06-22T14:40:19,640 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:19,640 ########################################################################## 2023-06-22T14:40:19,641 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:19,641 `classifiers = ['Programming Language :: Python :: 3', 'License :: OSI Approved :: GNU General Public License v2 (GPLv2)', 'Operating System :: OS Independent']` 2023-06-22T14:40:19,642 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:19,642 consider this value unless `classifiers` is listed as `dynamic`. 2023-06-22T14:40:19,643 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:19,643 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:19,644 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:19,644 follow strictly the standard. 2023-06-22T14:40:19,645 To prevent this warning, you can list `classifiers` under `dynamic` or alternatively 2023-06-22T14:40:19,645 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:19,645 configuration. 2023-06-22T14:40:19,646 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:19,647 or your builds will no longer be supported. 2023-06-22T14:40:19,647 ******************************************************************************** 2023-06-22T14:40:19,648 !! 2023-06-22T14:40:19,648 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:19,648 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `urls` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:19,649 !! 2023-06-22T14:40:19,649 ******************************************************************************** 2023-06-22T14:40:19,650 ########################################################################## 2023-06-22T14:40:19,650 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:19,650 ########################################################################## 2023-06-22T14:40:19,651 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:19,652 `urls = {'Bug Tracker': 'https://github.com/genomic-medicine-sweden/NGPIris/issues'}` 2023-06-22T14:40:19,652 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:19,653 consider this value unless `urls` is listed as `dynamic`. 2023-06-22T14:40:19,653 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:19,654 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:19,654 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:19,654 follow strictly the standard. 2023-06-22T14:40:19,655 To prevent this warning, you can list `urls` under `dynamic` or alternatively 2023-06-22T14:40:19,655 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:19,656 configuration. 2023-06-22T14:40:19,656 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:19,657 or your builds will no longer be supported. 2023-06-22T14:40:19,657 ******************************************************************************** 2023-06-22T14:40:19,658 !! 2023-06-22T14:40:19,658 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:19,658 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:19,659 !! 2023-06-22T14:40:19,659 ******************************************************************************** 2023-06-22T14:40:19,660 ########################################################################## 2023-06-22T14:40:19,660 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:19,660 ########################################################################## 2023-06-22T14:40:19,661 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:19,661 `dependencies = ['boto3>=1.12.34', 'click>=7.1.2', 'requests>=2.25.0']` 2023-06-22T14:40:19,662 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:19,662 consider this value unless `dependencies` is listed as `dynamic`. 2023-06-22T14:40:19,663 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:19,663 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:19,664 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:19,664 follow strictly the standard. 2023-06-22T14:40:19,665 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2023-06-22T14:40:19,665 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:19,666 configuration. 2023-06-22T14:40:19,667 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:19,667 or your builds will no longer be supported. 2023-06-22T14:40:19,667 ******************************************************************************** 2023-06-22T14:40:19,668 !! 2023-06-22T14:40:19,669 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:19,669 warning: no files found matching 'freeze.txt' 2023-06-22T14:40:19,670 warning: no files found matching 'profile.json' 2023-06-22T14:40:19,670 adding license file 'LICENSE' 2023-06-22T14:40:19,671 writing manifest file '/tmp/pip-modern-metadata-_uggvis6/NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:19,671 creating '/tmp/pip-modern-metadata-_uggvis6/NGPIris-4.3.0.dist-info' 2023-06-22T14:40:19,907 Preparing metadata (pyproject.toml): finished with status 'done' 2023-06-22T14:40:19,922 Source in /tmp/pip-wheel-e4rv0pap/ngpiris_bdda7e2842f045f4804cef680331df13 has version 4.3.0, which satisfies requirement ngpiris==4.3.0 from https://files.pythonhosted.org/packages/ed/eb/05dfd7fcc7d79d805c39635b819239ab4a0eacf1303352c9c39d2dd51a2d/NGPIris-4.3.0.tar.gz 2023-06-22T14:40:19,924 Removed ngpiris==4.3.0 from https://files.pythonhosted.org/packages/ed/eb/05dfd7fcc7d79d805c39635b819239ab4a0eacf1303352c9c39d2dd51a2d/NGPIris-4.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-22o2nm5p' 2023-06-22T14:40:19,939 Created temporary directory: /tmp/pip-unpack-i5cs0zb9 2023-06-22T14:40:19,940 Building wheels for collected packages: ngpiris 2023-06-22T14:40:19,950 Created temporary directory: /tmp/pip-wheel-vnfrh5ww 2023-06-22T14:40:19,951 Destination directory: /tmp/pip-wheel-vnfrh5ww 2023-06-22T14:40:19,956 Building wheel for ngpiris (pyproject.toml): started 2023-06-22T14:40:19,958 Running command Building wheel for ngpiris (pyproject.toml) 2023-06-22T14:40:21,823 running bdist_wheel 2023-06-22T14:40:21,860 running build 2023-06-22T14:40:21,861 running build_py 2023-06-22T14:40:21,872 creating build 2023-06-22T14:40:21,873 creating build/lib 2023-06-22T14:40:21,874 creating build/lib/NGPIris 2023-06-22T14:40:21,876 copying NGPIris/__init__.py -> build/lib/NGPIris 2023-06-22T14:40:21,881 creating build/lib/tests 2023-06-22T14:40:21,883 copying tests/__init__.py -> build/lib/tests 2023-06-22T14:40:21,886 copying tests/test_cmds.py -> build/lib/tests 2023-06-22T14:40:21,889 copying tests/test_hcp.py -> build/lib/tests 2023-06-22T14:40:21,894 creating build/lib/NGPIris/hcp 2023-06-22T14:40:21,896 copying NGPIris/hcp/hcp.py -> build/lib/NGPIris/hcp 2023-06-22T14:40:21,900 copying NGPIris/hcp/__init__.py -> build/lib/NGPIris/hcp 2023-06-22T14:40:21,904 copying NGPIris/hcp/config.py -> build/lib/NGPIris/hcp 2023-06-22T14:40:21,907 copying NGPIris/hcp/helpers.py -> build/lib/NGPIris/hcp 2023-06-22T14:40:21,910 copying NGPIris/hcp/errors.py -> build/lib/NGPIris/hcp 2023-06-22T14:40:21,914 copying NGPIris/hcp/interactive.py -> build/lib/NGPIris/hcp 2023-06-22T14:40:21,918 creating build/lib/NGPIris/hci 2023-06-22T14:40:21,920 copying NGPIris/hci/__init__.py -> build/lib/NGPIris/hci 2023-06-22T14:40:21,924 copying NGPIris/hci/hci.py -> build/lib/NGPIris/hci 2023-06-22T14:40:21,928 creating build/lib/NGPIris/preproc 2023-06-22T14:40:21,930 copying NGPIris/preproc/preproc.py -> build/lib/NGPIris/preproc 2023-06-22T14:40:21,935 copying NGPIris/preproc/__init__.py -> build/lib/NGPIris/preproc 2023-06-22T14:40:21,938 creating build/lib/NGPIris/cli 2023-06-22T14:40:21,940 copying NGPIris/cli/functions.py -> build/lib/NGPIris/cli 2023-06-22T14:40:21,944 copying NGPIris/cli/__init__.py -> build/lib/NGPIris/cli 2023-06-22T14:40:21,947 copying NGPIris/cli/utils.py -> build/lib/NGPIris/cli 2023-06-22T14:40:21,951 copying NGPIris/cli/base.py -> build/lib/NGPIris/cli 2023-06-22T14:40:21,954 running egg_info 2023-06-22T14:40:21,972 writing NGPIris.egg-info/PKG-INFO 2023-06-22T14:40:21,976 writing dependency_links to NGPIris.egg-info/dependency_links.txt 2023-06-22T14:40:21,979 writing entry points to NGPIris.egg-info/entry_points.txt 2023-06-22T14:40:21,981 writing requirements to NGPIris.egg-info/requires.txt 2023-06-22T14:40:21,983 writing top-level names to NGPIris.egg-info/top_level.txt 2023-06-22T14:40:22,006 reading manifest file 'NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:22,012 reading manifest template 'MANIFEST.in' 2023-06-22T14:40:22,014 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `requires-python` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:22,014 !! 2023-06-22T14:40:22,015 ******************************************************************************** 2023-06-22T14:40:22,015 ########################################################################## 2023-06-22T14:40:22,016 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:22,016 ########################################################################## 2023-06-22T14:40:22,017 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:22,018 `requires-python = '>=3.6'` 2023-06-22T14:40:22,019 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:22,019 consider this value unless `requires-python` is listed as `dynamic`. 2023-06-22T14:40:22,020 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:22,021 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:22,021 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:22,021 follow strictly the standard. 2023-06-22T14:40:22,022 To prevent this warning, you can list `requires-python` under `dynamic` or alternatively 2023-06-22T14:40:22,023 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:22,023 configuration. 2023-06-22T14:40:22,024 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:22,024 or your builds will no longer be supported. 2023-06-22T14:40:22,024 ******************************************************************************** 2023-06-22T14:40:22,025 !! 2023-06-22T14:40:22,025 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:22,026 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `classifiers` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:22,026 !! 2023-06-22T14:40:22,027 ******************************************************************************** 2023-06-22T14:40:22,027 ########################################################################## 2023-06-22T14:40:22,027 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:22,027 ########################################################################## 2023-06-22T14:40:22,028 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:22,029 `classifiers = ['Programming Language :: Python :: 3', 'License :: OSI Approved :: GNU General Public License v2 (GPLv2)', 'Operating System :: OS Independent']` 2023-06-22T14:40:22,029 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:22,029 consider this value unless `classifiers` is listed as `dynamic`. 2023-06-22T14:40:22,030 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:22,031 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:22,031 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:22,031 follow strictly the standard. 2023-06-22T14:40:22,032 To prevent this warning, you can list `classifiers` under `dynamic` or alternatively 2023-06-22T14:40:22,032 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:22,032 configuration. 2023-06-22T14:40:22,033 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:22,033 or your builds will no longer be supported. 2023-06-22T14:40:22,034 ******************************************************************************** 2023-06-22T14:40:22,035 !! 2023-06-22T14:40:22,035 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:22,035 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `urls` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:22,036 !! 2023-06-22T14:40:22,036 ******************************************************************************** 2023-06-22T14:40:22,036 ########################################################################## 2023-06-22T14:40:22,037 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:22,037 ########################################################################## 2023-06-22T14:40:22,038 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:22,038 `urls = {'Bug Tracker': 'https://github.com/genomic-medicine-sweden/NGPIris/issues'}` 2023-06-22T14:40:22,039 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:22,039 consider this value unless `urls` is listed as `dynamic`. 2023-06-22T14:40:22,040 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:22,040 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:22,041 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:22,041 follow strictly the standard. 2023-06-22T14:40:22,043 To prevent this warning, you can list `urls` under `dynamic` or alternatively 2023-06-22T14:40:22,043 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:22,044 configuration. 2023-06-22T14:40:22,045 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:22,045 or your builds will no longer be supported. 2023-06-22T14:40:22,045 ******************************************************************************** 2023-06-22T14:40:22,046 !! 2023-06-22T14:40:22,047 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:22,047 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2023-06-22T14:40:22,048 !! 2023-06-22T14:40:22,049 ******************************************************************************** 2023-06-22T14:40:22,049 ########################################################################## 2023-06-22T14:40:22,049 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-06-22T14:40:22,050 ########################################################################## 2023-06-22T14:40:22,051 The following seems to be defined outside of `pyproject.toml`: 2023-06-22T14:40:22,051 `dependencies = ['boto3>=1.12.34', 'click>=7.1.2', 'requests>=2.25.0']` 2023-06-22T14:40:22,052 According to the spec (see the link below), however, setuptools CANNOT 2023-06-22T14:40:22,054 consider this value unless `dependencies` is listed as `dynamic`. 2023-06-22T14:40:22,055 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-06-22T14:40:22,056 For the time being, `setuptools` will still consider the given value (as a 2023-06-22T14:40:22,056 **transitional** measure), but please note that future releases of setuptools will 2023-06-22T14:40:22,057 follow strictly the standard. 2023-06-22T14:40:22,058 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2023-06-22T14:40:22,058 remove the `[project]` table from your file and rely entirely on other means of 2023-06-22T14:40:22,058 configuration. 2023-06-22T14:40:22,059 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-06-22T14:40:22,060 or your builds will no longer be supported. 2023-06-22T14:40:22,060 ******************************************************************************** 2023-06-22T14:40:22,061 !! 2023-06-22T14:40:22,061 _handle_missing_dynamic(dist, project_table) 2023-06-22T14:40:22,062 warning: no files found matching 'freeze.txt' 2023-06-22T14:40:22,062 warning: no files found matching 'profile.json' 2023-06-22T14:40:22,063 adding license file 'LICENSE' 2023-06-22T14:40:22,063 writing manifest file 'NGPIris.egg-info/SOURCES.txt' 2023-06-22T14:40:22,064 creating build/lib/tests/data 2023-06-22T14:40:22,064 copying tests/data/test.json -> build/lib/tests/data 2023-06-22T14:40:22,064 copying tests/data/test_reads_R1.fasterq -> build/lib/tests/data 2023-06-22T14:40:22,065 copying tests/data/test_reads_R1.fastq.gz -> build/lib/tests/data 2023-06-22T14:40:22,065 copying NGPIris/hci/template_query.json -> build/lib/NGPIris/hci 2023-06-22T14:40:22,088 installing to build/bdist.linux-armv7l/wheel 2023-06-22T14:40:22,089 running install 2023-06-22T14:40:22,150 running install_lib 2023-06-22T14:40:22,160 creating build/bdist.linux-armv7l 2023-06-22T14:40:22,161 creating build/bdist.linux-armv7l/wheel 2023-06-22T14:40:22,164 creating build/bdist.linux-armv7l/wheel/NGPIris 2023-06-22T14:40:22,167 creating build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,169 copying build/lib/NGPIris/hcp/hcp.py -> build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,174 copying build/lib/NGPIris/hcp/__init__.py -> build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,178 copying build/lib/NGPIris/hcp/config.py -> build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,182 copying build/lib/NGPIris/hcp/helpers.py -> build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,186 copying build/lib/NGPIris/hcp/errors.py -> build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,189 copying build/lib/NGPIris/hcp/interactive.py -> build/bdist.linux-armv7l/wheel/NGPIris/hcp 2023-06-22T14:40:22,193 copying build/lib/NGPIris/__init__.py -> build/bdist.linux-armv7l/wheel/NGPIris 2023-06-22T14:40:22,198 creating build/bdist.linux-armv7l/wheel/NGPIris/hci 2023-06-22T14:40:22,199 copying build/lib/NGPIris/hci/__init__.py -> build/bdist.linux-armv7l/wheel/NGPIris/hci 2023-06-22T14:40:22,203 copying build/lib/NGPIris/hci/hci.py -> build/bdist.linux-armv7l/wheel/NGPIris/hci 2023-06-22T14:40:22,207 copying build/lib/NGPIris/hci/template_query.json -> build/bdist.linux-armv7l/wheel/NGPIris/hci 2023-06-22T14:40:22,212 creating build/bdist.linux-armv7l/wheel/NGPIris/preproc 2023-06-22T14:40:22,213 copying build/lib/NGPIris/preproc/preproc.py -> build/bdist.linux-armv7l/wheel/NGPIris/preproc 2023-06-22T14:40:22,218 copying build/lib/NGPIris/preproc/__init__.py -> build/bdist.linux-armv7l/wheel/NGPIris/preproc 2023-06-22T14:40:22,222 creating build/bdist.linux-armv7l/wheel/NGPIris/cli 2023-06-22T14:40:22,224 copying build/lib/NGPIris/cli/functions.py -> build/bdist.linux-armv7l/wheel/NGPIris/cli 2023-06-22T14:40:22,228 copying build/lib/NGPIris/cli/__init__.py -> build/bdist.linux-armv7l/wheel/NGPIris/cli 2023-06-22T14:40:22,231 copying build/lib/NGPIris/cli/utils.py -> build/bdist.linux-armv7l/wheel/NGPIris/cli 2023-06-22T14:40:22,235 copying build/lib/NGPIris/cli/base.py -> build/bdist.linux-armv7l/wheel/NGPIris/cli 2023-06-22T14:40:22,240 creating build/bdist.linux-armv7l/wheel/tests 2023-06-22T14:40:22,242 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-22T14:40:22,246 copying build/lib/tests/test_cmds.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-22T14:40:22,248 copying build/lib/tests/test_hcp.py -> build/bdist.linux-armv7l/wheel/tests 2023-06-22T14:40:22,253 creating build/bdist.linux-armv7l/wheel/tests/data 2023-06-22T14:40:22,254 copying build/lib/tests/data/test.json -> build/bdist.linux-armv7l/wheel/tests/data 2023-06-22T14:40:22,258 copying build/lib/tests/data/test_reads_R1.fastq.gz -> build/bdist.linux-armv7l/wheel/tests/data 2023-06-22T14:40:22,261 copying build/lib/tests/data/test_reads_R1.fasterq -> build/bdist.linux-armv7l/wheel/tests/data 2023-06-22T14:40:22,267 running install_data 2023-06-22T14:40:22,278 creating build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data 2023-06-22T14:40:22,279 creating build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data 2023-06-22T14:40:22,282 creating build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/NGPIris 2023-06-22T14:40:22,284 copying config.ini -> build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/NGPIris 2023-06-22T14:40:22,287 creating build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/reference 2023-06-22T14:40:22,289 copying reference/covidMetadataAllowedValues.csv -> build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/reference 2023-06-22T14:40:22,293 copying reference/covidMetadataTemplate.csv -> build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/reference 2023-06-22T14:40:22,296 creating build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/testdata 2023-06-22T14:40:22,298 copying tests/data/test_reads_R1.fasterq -> build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/testdata 2023-06-22T14:40:22,304 copying tests/data/test_reads_R1.fastq.gz -> build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/testdata 2023-06-22T14:40:22,307 copying tests/data/test.json -> build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.data/data/testdata 2023-06-22T14:40:22,310 running install_egg_info 2023-06-22T14:40:22,320 Copying NGPIris.egg-info to build/bdist.linux-armv7l/wheel/NGPIris-4.3.0-py3.7.egg-info 2023-06-22T14:40:22,345 running install_scripts 2023-06-22T14:40:22,382 creating build/bdist.linux-armv7l/wheel/NGPIris-4.3.0.dist-info/WHEEL 2023-06-22T14:40:22,387 creating '/tmp/pip-wheel-vnfrh5ww/.tmp-fk8rvp4g/NGPIris-4.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-22T14:40:22,392 adding 'NGPIris/__init__.py' 2023-06-22T14:40:22,396 adding 'NGPIris/cli/__init__.py' 2023-06-22T14:40:22,398 adding 'NGPIris/cli/base.py' 2023-06-22T14:40:22,402 adding 'NGPIris/cli/functions.py' 2023-06-22T14:40:22,405 adding 'NGPIris/cli/utils.py' 2023-06-22T14:40:22,409 adding 'NGPIris/hci/__init__.py' 2023-06-22T14:40:22,411 adding 'NGPIris/hci/hci.py' 2023-06-22T14:40:22,414 adding 'NGPIris/hci/template_query.json' 2023-06-22T14:40:22,417 adding 'NGPIris/hcp/__init__.py' 2023-06-22T14:40:22,419 adding 'NGPIris/hcp/config.py' 2023-06-22T14:40:22,422 adding 'NGPIris/hcp/errors.py' 2023-06-22T14:40:22,426 adding 'NGPIris/hcp/hcp.py' 2023-06-22T14:40:22,429 adding 'NGPIris/hcp/helpers.py' 2023-06-22T14:40:22,432 adding 'NGPIris/hcp/interactive.py' 2023-06-22T14:40:22,435 adding 'NGPIris/preproc/__init__.py' 2023-06-22T14:40:22,438 adding 'NGPIris/preproc/preproc.py' 2023-06-22T14:40:22,444 adding 'NGPIris-4.3.0.data/data/NGPIris/config.ini' 2023-06-22T14:40:22,449 adding 'NGPIris-4.3.0.data/data/reference/covidMetadataAllowedValues.csv' 2023-06-22T14:40:22,450 adding 'NGPIris-4.3.0.data/data/reference/covidMetadataTemplate.csv' 2023-06-22T14:40:22,454 adding 'NGPIris-4.3.0.data/data/testdata/test.json' 2023-06-22T14:40:22,467 adding 'NGPIris-4.3.0.data/data/testdata/test_reads_R1.fasterq' 2023-06-22T14:40:22,470 adding 'NGPIris-4.3.0.data/data/testdata/test_reads_R1.fastq.gz' 2023-06-22T14:40:22,477 adding 'tests/__init__.py' 2023-06-22T14:40:22,479 adding 'tests/test_cmds.py' 2023-06-22T14:40:22,482 adding 'tests/test_hcp.py' 2023-06-22T14:40:22,486 adding 'tests/data/test.json' 2023-06-22T14:40:22,498 adding 'tests/data/test_reads_R1.fasterq' 2023-06-22T14:40:22,502 adding 'tests/data/test_reads_R1.fastq.gz' 2023-06-22T14:40:22,509 adding 'NGPIris-4.3.0.dist-info/LICENSE' 2023-06-22T14:40:22,513 adding 'NGPIris-4.3.0.dist-info/METADATA' 2023-06-22T14:40:22,515 adding 'NGPIris-4.3.0.dist-info/WHEEL' 2023-06-22T14:40:22,517 adding 'NGPIris-4.3.0.dist-info/entry_points.txt' 2023-06-22T14:40:22,518 adding 'NGPIris-4.3.0.dist-info/top_level.txt' 2023-06-22T14:40:22,521 adding 'NGPIris-4.3.0.dist-info/RECORD' 2023-06-22T14:40:22,529 removing build/bdist.linux-armv7l/wheel 2023-06-22T14:40:22,557 /tmp/pip-build-env-7zs5zz8t/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'tests.data' is absent from the `packages` configuration. 2023-06-22T14:40:22,558 !! 2023-06-22T14:40:22,559 ******************************************************************************** 2023-06-22T14:40:22,559 ############################ 2023-06-22T14:40:22,559 # Package would be ignored # 2023-06-22T14:40:22,560 ############################ 2023-06-22T14:40:22,560 Python recognizes 'tests.data' as an importable package[^1], 2023-06-22T14:40:22,561 but it is absent from setuptools' `packages` configuration. 2023-06-22T14:40:22,562 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-22T14:40:22,562 package, please make sure that 'tests.data' is explicitly added 2023-06-22T14:40:22,563 to the `packages` configuration field. 2023-06-22T14:40:22,564 Alternatively, you can also rely on setuptools' discovery methods 2023-06-22T14:40:22,564 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-22T14:40:22,565 instead of `find_packages(...)`/`find:`). 2023-06-22T14:40:22,565 You can read more about "package discovery" on setuptools documentation page: 2023-06-22T14:40:22,566 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-22T14:40:22,567 If you don't want 'tests.data' to be distributed and are 2023-06-22T14:40:22,568 already explicitly excluding 'tests.data' via 2023-06-22T14:40:22,568 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-22T14:40:22,568 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-22T14:40:22,569 combination with a more fine grained `package-data` configuration. 2023-06-22T14:40:22,570 You can read more about "package data files" on setuptools documentation page: 2023-06-22T14:40:22,571 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-22T14:40:22,572 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-22T14:40:22,572 even if it does not contain any `.py` files. 2023-06-22T14:40:22,573 On the other hand, currently there is no concept of package data 2023-06-22T14:40:22,573 directory, all directories are treated like packages. 2023-06-22T14:40:22,574 ******************************************************************************** 2023-06-22T14:40:22,574 !! 2023-06-22T14:40:22,575 check.warn(importable) 2023-06-22T14:40:22,736 Building wheel for ngpiris (pyproject.toml): finished with status 'done' 2023-06-22T14:40:22,755 Created wheel for ngpiris: filename=NGPIris-4.3.0-py3-none-any.whl size=121808 sha256=3cd50c241aeba0f6a7981599f66e52ff6bf3a354e62aebe1d3e32e2e563ffa2e 2023-06-22T14:40:22,757 Stored in directory: /tmp/pip-ephem-wheel-cache-djleaieu/wheels/39/96/fa/17e1d3c8aa06d6ee2ec4a0c638315a93c8937213e6d7bd1dbd 2023-06-22T14:40:22,788 Successfully built ngpiris 2023-06-22T14:40:22,804 Removed build tracker: '/tmp/pip-build-tracker-22o2nm5p'