2023-06-24T08:19:01,227 Created temporary directory: /tmp/pip-build-tracker-wyvkj_ii 2023-06-24T08:19:01,228 Initialized build tracking at /tmp/pip-build-tracker-wyvkj_ii 2023-06-24T08:19:01,228 Created build tracker: /tmp/pip-build-tracker-wyvkj_ii 2023-06-24T08:19:01,228 Entered build tracker: /tmp/pip-build-tracker-wyvkj_ii 2023-06-24T08:19:01,229 Created temporary directory: /tmp/pip-wheel-q05vfxpa 2023-06-24T08:19:01,232 Created temporary directory: /tmp/pip-ephem-wheel-cache-jb60mpkg 2023-06-24T08:19:01,258 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-24T08:19:01,261 2 location(s) to search for versions of funid: 2023-06-24T08:19:01,261 * https://pypi.org/simple/funid/ 2023-06-24T08:19:01,261 * https://www.piwheels.org/simple/funid/ 2023-06-24T08:19:01,261 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2023-06-24T08:19:01,262 Getting page https://pypi.org/simple/funid/ 2023-06-24T08:19:01,263 Found index url https://pypi.org/simple/ 2023-06-24T08:19:01,320 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2023-06-24T08:19:01,326 Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0 2023-06-24T08:19:01,327 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,327 Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2 2023-06-24T08:19:01,328 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,328 Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1 2023-06-24T08:19:01,329 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,329 Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0 2023-06-24T08:19:01,330 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,330 Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1 2023-06-24T08:19:01,331 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,331 Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4 2023-06-24T08:19:01,332 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,332 Found link https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.5 2023-06-24T08:19:01,333 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/b7/27/c64985b174cbfa662e2109d838292a69d1669ad6a3a36294ee03ce81ef2a/FunID-0.3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,333 Found link https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.6.1 2023-06-24T08:19:01,333 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/1f/44/739693947517bbc2e128df01ee142d72ee3358f7cc7daba4a3759fbf34bd/FunID-0.3.7-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,334 Found link https://files.pythonhosted.org/packages/a2/14/7ae571dd6e4b918e2a85ca1625481c5764c15f2f4ecebb64e738e4863c57/FunID-0.3.7.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.7 2023-06-24T08:19:01,334 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/89/e3/e48669d0fdeafd9b79bcd3b601ed05547df828c6f5a3cd0d733e28289738/FunID-0.3.8-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,334 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f4/45/d1bc4761848b0f4ece4dc47311a91a7e85668eb49b3bbc86843e4508dbc1/FunID-0.3.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,335 Found link https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.1 2023-06-24T08:19:01,335 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f9/05/5a5739948741051441923681ab8f41aeb24b4b67aee087e3911831cd397a/FunID-0.3.8.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,336 Found link https://files.pythonhosted.org/packages/4a/4a/3bf498c2707726c16177fb6d5e4c1fb6b942aa0f857378f22345cee709b9/FunID-0.3.8.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.2 2023-06-24T08:19:01,336 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/51/ac/f8561c5c3715309d959188f62cef662154c247362fa548893dda38582f08/FunID-0.3.9-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,337 Found link https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.9 2023-06-24T08:19:01,337 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/26/59/dd98aa71ec91f80ff255b9177e7c3705f2352298dc8bb48bfa492d8304e3/FunID-0.3.10.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,338 Found link https://files.pythonhosted.org/packages/da/ef/a3b426feaf718c30c259c165124120c3192833b4c356a8a10efa909ac4b7/FunID-0.3.10.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.10.1 2023-06-24T08:19:01,338 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/17/b5/c3439f3af84951ffe85ed70190fdc02a33ab0e435a934a02c08f49505642/FunID-0.3.11-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,338 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/82/95/47d34ff9a0cc4a13e411dda8b40535efd54149fd259ef126246e6fd7ecdb/FunID-0.3.11.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,339 Found link https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.11.0 2023-06-24T08:19:01,339 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2023-06-24T08:19:01,339 Getting page https://www.piwheels.org/simple/funid/ 2023-06-24T08:19:01,340 Found index url https://www.piwheels.org/simple/ 2023-06-24T08:19:01,493 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2023-06-24T08:19:01,498 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.10.1-py3-none-any.whl#sha256=7ac9e1373fc681d838576b55f51c104675d6fc3134a2d545da50145e18d08705 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,498 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.9-py3-none-any.whl#sha256=4431b10bd1c85b826c3ec29a0d6012ea6c189c62b3b9a78ca40cb341e5aba58a (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,498 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.8.2-py3-none-any.whl#sha256=06eb041030a5d98c5317f93863fa0bafdb3bac2e3225487b61109016d3ae8b89 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,498 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.8.1-py3-none-any.whl#sha256=e084fdf424ae421530d153e56c4a7a15849d59762617b101ba672265e1f83ae2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,499 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.7-py3-none-any.whl#sha256=696cfcf7f361ec4e0dd269ac3c0b30051c83fb75dd92ee7b8b0813f1b6c71f6c (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,499 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.6.1-py3-none-any.whl#sha256=9eddeab3cb03eb693bd4e1e231ab1076caa820fd6db88ef6c584b309cf87af4b (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,499 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.5-py3-none-any.whl#sha256=010daca223b2f36ea9811ebd48eb1afa57c9a0ac2f3a3f84f9b86603107db381 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,499 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.4-py3-none-any.whl#sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,499 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,499 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,500 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-24T08:19:01,500 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,500 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-24T08:19:01,500 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2023-06-24T08:19:01,500 Skipping link: not a file: https://pypi.org/simple/funid/ 2023-06-24T08:19:01,520 Given no hashes to check 1 links for project 'funid': discarding no candidates 2023-06-24T08:19:01,536 Collecting funid==0.3.11 2023-06-24T08:19:01,538 Created temporary directory: /tmp/pip-unpack-77kbf_tw 2023-06-24T08:19:01,669 Downloading FunID-0.3.11.0.tar.gz (51.4 MB) 2023-06-24T08:19:15,250 Added funid==0.3.11 from https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz to build tracker '/tmp/pip-build-tracker-wyvkj_ii' 2023-06-24T08:19:15,252 Running setup.py (path:/tmp/pip-wheel-q05vfxpa/funid_74dc0435669c459fa33f5b80ce0c9318/setup.py) egg_info for package funid 2023-06-24T08:19:15,253 Created temporary directory: /tmp/pip-pip-egg-info-fmwdi6kv 2023-06-24T08:19:15,253 Preparing metadata (setup.py): started 2023-06-24T08:19:15,254 Running command python setup.py egg_info 2023-06-24T08:19:15,888 {'name': 'FunID', 'version': '0.3.11.0', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'psutil', 'PyQt5', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'scipy', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-06-24T08:19:15,888 running egg_info 2023-06-24T08:19:15,889 creating /tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info 2023-06-24T08:19:15,917 writing /tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/PKG-INFO 2023-06-24T08:19:15,919 writing dependency_links to /tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/dependency_links.txt 2023-06-24T08:19:15,921 writing entry points to /tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/entry_points.txt 2023-06-24T08:19:15,923 writing requirements to /tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/requires.txt 2023-06-24T08:19:15,924 writing top-level names to /tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/top_level.txt 2023-06-24T08:19:15,925 writing manifest file '/tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/SOURCES.txt' 2023-06-24T08:19:16,017 reading manifest file '/tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/SOURCES.txt' 2023-06-24T08:19:16,019 adding license file 'LICENSE' 2023-06-24T08:19:16,022 writing manifest file '/tmp/pip-pip-egg-info-fmwdi6kv/FunID.egg-info/SOURCES.txt' 2023-06-24T08:19:16,081 Preparing metadata (setup.py): finished with status 'done' 2023-06-24T08:19:16,086 Source in /tmp/pip-wheel-q05vfxpa/funid_74dc0435669c459fa33f5b80ce0c9318 has version 0.3.11.0, which satisfies requirement funid==0.3.11 from https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz 2023-06-24T08:19:16,087 Removed funid==0.3.11 from https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz from build tracker '/tmp/pip-build-tracker-wyvkj_ii' 2023-06-24T08:19:16,094 Created temporary directory: /tmp/pip-unpack-pdx53ysa 2023-06-24T08:19:16,094 Building wheels for collected packages: funid 2023-06-24T08:19:16,099 Created temporary directory: /tmp/pip-wheel-m91hc0ur 2023-06-24T08:19:16,099 Building wheel for funid (setup.py): started 2023-06-24T08:19:16,100 Destination directory: /tmp/pip-wheel-m91hc0ur 2023-06-24T08:19:16,100 Running command python setup.py bdist_wheel 2023-06-24T08:19:16,523 {'name': 'FunID', 'version': '0.3.11.0', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'psutil', 'PyQt5', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'scipy', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-06-24T08:19:16,757 running bdist_wheel 2023-06-24T08:19:17,051 running build 2023-06-24T08:19:17,051 running build_py 2023-06-24T08:19:17,082 creating build 2023-06-24T08:19:17,082 creating build/lib 2023-06-24T08:19:17,083 creating build/lib/funid 2023-06-24T08:19:17,084 copying funid/main.py -> build/lib/funid 2023-06-24T08:19:17,087 copying funid/FunID_GUI.py -> build/lib/funid 2023-06-24T08:19:17,089 copying funid/__init__.py -> build/lib/funid 2023-06-24T08:19:17,092 creating build/lib/funid/src 2023-06-24T08:19:17,093 copying funid/src/reporter.py -> build/lib/funid/src 2023-06-24T08:19:17,097 copying funid/src/command.py -> build/lib/funid/src 2023-06-24T08:19:17,099 copying funid/src/align.py -> build/lib/funid/src 2023-06-24T08:19:17,101 copying funid/src/tool.py -> build/lib/funid/src 2023-06-24T08:19:17,103 copying funid/src/modeltest.py -> build/lib/funid/src 2023-06-24T08:19:17,106 copying funid/src/initialize.py -> build/lib/funid/src 2023-06-24T08:19:17,108 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2023-06-24T08:19:17,112 copying funid/src/save.py -> build/lib/funid/src 2023-06-24T08:19:17,114 copying funid/src/opt_generator.py -> build/lib/funid/src 2023-06-24T08:19:17,116 copying funid/src/manage_input.py -> build/lib/funid/src 2023-06-24T08:19:17,119 copying funid/src/patch.py -> build/lib/funid/src 2023-06-24T08:19:17,121 copying funid/src/ext.py -> build/lib/funid/src 2023-06-24T08:19:17,123 copying funid/src/logics.py -> build/lib/funid/src 2023-06-24T08:19:17,125 copying funid/src/hasher.py -> build/lib/funid/src 2023-06-24T08:19:17,127 copying funid/src/validate_option.py -> build/lib/funid/src 2023-06-24T08:19:17,131 copying funid/src/validation.py -> build/lib/funid/src 2023-06-24T08:19:17,133 copying funid/src/cluster.py -> build/lib/funid/src 2023-06-24T08:19:17,135 copying funid/src/concatenate.py -> build/lib/funid/src 2023-06-24T08:19:17,138 copying funid/src/tree.py -> build/lib/funid/src 2023-06-24T08:19:17,140 copying funid/src/logger.py -> build/lib/funid/src 2023-06-24T08:19:17,142 copying funid/src/__init__.py -> build/lib/funid/src 2023-06-24T08:19:17,143 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2023-06-24T08:19:17,146 copying funid/src/search.py -> build/lib/funid/src 2023-06-24T08:19:17,148 copying funid/src/trim.py -> build/lib/funid/src 2023-06-24T08:19:17,150 copying funid/src/ncbi.py -> build/lib/funid/src 2023-06-24T08:19:17,152 copying funid/src/dataset.py -> build/lib/funid/src 2023-06-24T08:19:17,155 creating build/lib/funid/data 2023-06-24T08:19:17,156 copying funid/data/__init__.py -> build/lib/funid/data 2023-06-24T08:19:17,158 running egg_info 2023-06-24T08:19:17,220 writing FunID.egg-info/PKG-INFO 2023-06-24T08:19:17,222 writing dependency_links to FunID.egg-info/dependency_links.txt 2023-06-24T08:19:17,224 writing entry points to FunID.egg-info/entry_points.txt 2023-06-24T08:19:17,225 writing requirements to FunID.egg-info/requires.txt 2023-06-24T08:19:17,226 writing top-level names to FunID.egg-info/top_level.txt 2023-06-24T08:19:17,261 reading manifest file 'FunID.egg-info/SOURCES.txt' 2023-06-24T08:19:17,270 adding license file 'LICENSE' 2023-06-24T08:19:17,277 writing manifest file 'FunID.egg-info/SOURCES.txt' 2023-06-24T08:19:17,280 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external' is absent from the `packages` configuration. 2023-06-24T08:19:17,280 !! 2023-06-24T08:19:17,280 ******************************************************************************** 2023-06-24T08:19:17,281 ############################ 2023-06-24T08:19:17,281 # Package would be ignored # 2023-06-24T08:19:17,281 ############################ 2023-06-24T08:19:17,281 Python recognizes 'funid.external' as an importable package[^1], 2023-06-24T08:19:17,281 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,281 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,281 package, please make sure that 'funid.external' is explicitly added 2023-06-24T08:19:17,282 to the `packages` configuration field. 2023-06-24T08:19:17,282 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,282 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,282 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,282 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,282 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,283 If you don't want 'funid.external' to be distributed and are 2023-06-24T08:19:17,283 already explicitly excluding 'funid.external' via 2023-06-24T08:19:17,283 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,283 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,283 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,283 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,284 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,284 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,284 even if it does not contain any `.py` files. 2023-06-24T08:19:17,284 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,284 directory, all directories are treated like packages. 2023-06-24T08:19:17,284 ******************************************************************************** 2023-06-24T08:19:17,285 !! 2023-06-24T08:19:17,285 check.warn(importable) 2023-06-24T08:19:17,285 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows' is absent from the `packages` configuration. 2023-06-24T08:19:17,285 !! 2023-06-24T08:19:17,285 ******************************************************************************** 2023-06-24T08:19:17,286 ############################ 2023-06-24T08:19:17,286 # Package would be ignored # 2023-06-24T08:19:17,286 ############################ 2023-06-24T08:19:17,286 Python recognizes 'funid.external.BLAST_Windows' as an importable package[^1], 2023-06-24T08:19:17,286 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,286 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,286 package, please make sure that 'funid.external.BLAST_Windows' is explicitly added 2023-06-24T08:19:17,286 to the `packages` configuration field. 2023-06-24T08:19:17,287 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,287 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,287 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,287 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,287 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,288 If you don't want 'funid.external.BLAST_Windows' to be distributed and are 2023-06-24T08:19:17,288 already explicitly excluding 'funid.external.BLAST_Windows' via 2023-06-24T08:19:17,288 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,288 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,288 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,288 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,289 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,289 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,289 even if it does not contain any `.py` files. 2023-06-24T08:19:17,289 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,289 directory, all directories are treated like packages. 2023-06-24T08:19:17,289 ******************************************************************************** 2023-06-24T08:19:17,289 !! 2023-06-24T08:19:17,290 check.warn(importable) 2023-06-24T08:19:17,290 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.bin' is absent from the `packages` configuration. 2023-06-24T08:19:17,290 !! 2023-06-24T08:19:17,290 ******************************************************************************** 2023-06-24T08:19:17,290 ############################ 2023-06-24T08:19:17,290 # Package would be ignored # 2023-06-24T08:19:17,290 ############################ 2023-06-24T08:19:17,290 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package[^1], 2023-06-24T08:19:17,291 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,291 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,291 package, please make sure that 'funid.external.BLAST_Windows.bin' is explicitly added 2023-06-24T08:19:17,291 to the `packages` configuration field. 2023-06-24T08:19:17,291 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,291 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,292 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,292 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,292 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,292 If you don't want 'funid.external.BLAST_Windows.bin' to be distributed and are 2023-06-24T08:19:17,292 already explicitly excluding 'funid.external.BLAST_Windows.bin' via 2023-06-24T08:19:17,292 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,293 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,293 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,293 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,293 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,293 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,294 even if it does not contain any `.py` files. 2023-06-24T08:19:17,294 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,294 directory, all directories are treated like packages. 2023-06-24T08:19:17,294 ******************************************************************************** 2023-06-24T08:19:17,294 !! 2023-06-24T08:19:17,294 check.warn(importable) 2023-06-24T08:19:17,294 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.doc' is absent from the `packages` configuration. 2023-06-24T08:19:17,295 !! 2023-06-24T08:19:17,295 ******************************************************************************** 2023-06-24T08:19:17,295 ############################ 2023-06-24T08:19:17,295 # Package would be ignored # 2023-06-24T08:19:17,295 ############################ 2023-06-24T08:19:17,295 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package[^1], 2023-06-24T08:19:17,295 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,296 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,296 package, please make sure that 'funid.external.BLAST_Windows.doc' is explicitly added 2023-06-24T08:19:17,296 to the `packages` configuration field. 2023-06-24T08:19:17,296 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,296 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,296 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,296 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,297 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,297 If you don't want 'funid.external.BLAST_Windows.doc' to be distributed and are 2023-06-24T08:19:17,297 already explicitly excluding 'funid.external.BLAST_Windows.doc' via 2023-06-24T08:19:17,297 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,297 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,297 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,298 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,298 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,298 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,298 even if it does not contain any `.py` files. 2023-06-24T08:19:17,298 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,298 directory, all directories are treated like packages. 2023-06-24T08:19:17,299 ******************************************************************************** 2023-06-24T08:19:17,299 !! 2023-06-24T08:19:17,299 check.warn(importable) 2023-06-24T08:19:17,299 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.FastTree_Windows' is absent from the `packages` configuration. 2023-06-24T08:19:17,299 !! 2023-06-24T08:19:17,299 ******************************************************************************** 2023-06-24T08:19:17,299 ############################ 2023-06-24T08:19:17,300 # Package would be ignored # 2023-06-24T08:19:17,300 ############################ 2023-06-24T08:19:17,300 Python recognizes 'funid.external.FastTree_Windows' as an importable package[^1], 2023-06-24T08:19:17,300 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,300 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,300 package, please make sure that 'funid.external.FastTree_Windows' is explicitly added 2023-06-24T08:19:17,300 to the `packages` configuration field. 2023-06-24T08:19:17,300 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,301 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,301 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,301 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,301 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,302 If you don't want 'funid.external.FastTree_Windows' to be distributed and are 2023-06-24T08:19:17,302 already explicitly excluding 'funid.external.FastTree_Windows' via 2023-06-24T08:19:17,302 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,302 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,302 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,302 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,303 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,303 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,303 even if it does not contain any `.py` files. 2023-06-24T08:19:17,303 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,303 directory, all directories are treated like packages. 2023-06-24T08:19:17,304 ******************************************************************************** 2023-06-24T08:19:17,304 !! 2023-06-24T08:19:17,304 check.warn(importable) 2023-06-24T08:19:17,304 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.RAxML_Windows' is absent from the `packages` configuration. 2023-06-24T08:19:17,304 !! 2023-06-24T08:19:17,304 ******************************************************************************** 2023-06-24T08:19:17,305 ############################ 2023-06-24T08:19:17,305 # Package would be ignored # 2023-06-24T08:19:17,305 ############################ 2023-06-24T08:19:17,305 Python recognizes 'funid.external.RAxML_Windows' as an importable package[^1], 2023-06-24T08:19:17,305 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,305 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,306 package, please make sure that 'funid.external.RAxML_Windows' is explicitly added 2023-06-24T08:19:17,306 to the `packages` configuration field. 2023-06-24T08:19:17,306 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,306 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,306 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,306 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,307 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,307 If you don't want 'funid.external.RAxML_Windows' to be distributed and are 2023-06-24T08:19:17,307 already explicitly excluding 'funid.external.RAxML_Windows' via 2023-06-24T08:19:17,307 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,307 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,307 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,308 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,308 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,308 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,308 even if it does not contain any `.py` files. 2023-06-24T08:19:17,309 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,309 directory, all directories are treated like packages. 2023-06-24T08:19:17,309 ******************************************************************************** 2023-06-24T08:19:17,309 !! 2023-06-24T08:19:17,309 check.warn(importable) 2023-06-24T08:19:17,309 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows' is absent from the `packages` configuration. 2023-06-24T08:19:17,309 !! 2023-06-24T08:19:17,310 ******************************************************************************** 2023-06-24T08:19:17,310 ############################ 2023-06-24T08:19:17,310 # Package would be ignored # 2023-06-24T08:19:17,310 ############################ 2023-06-24T08:19:17,311 Python recognizes 'funid.external.mmseqs_Windows' as an importable package[^1], 2023-06-24T08:19:17,311 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,311 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,311 package, please make sure that 'funid.external.mmseqs_Windows' is explicitly added 2023-06-24T08:19:17,312 to the `packages` configuration field. 2023-06-24T08:19:17,312 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,312 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,312 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,313 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,313 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,313 If you don't want 'funid.external.mmseqs_Windows' to be distributed and are 2023-06-24T08:19:17,313 already explicitly excluding 'funid.external.mmseqs_Windows' via 2023-06-24T08:19:17,313 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,313 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,314 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,314 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,314 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,314 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,315 even if it does not contain any `.py` files. 2023-06-24T08:19:17,315 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,315 directory, all directories are treated like packages. 2023-06-24T08:19:17,315 ******************************************************************************** 2023-06-24T08:19:17,315 !! 2023-06-24T08:19:17,315 check.warn(importable) 2023-06-24T08:19:17,315 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.bin' is absent from the `packages` configuration. 2023-06-24T08:19:17,316 !! 2023-06-24T08:19:17,316 ******************************************************************************** 2023-06-24T08:19:17,316 ############################ 2023-06-24T08:19:17,316 # Package would be ignored # 2023-06-24T08:19:17,316 ############################ 2023-06-24T08:19:17,316 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package[^1], 2023-06-24T08:19:17,316 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,317 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,317 package, please make sure that 'funid.external.mmseqs_Windows.bin' is explicitly added 2023-06-24T08:19:17,317 to the `packages` configuration field. 2023-06-24T08:19:17,317 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,317 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,317 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,317 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,318 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,318 If you don't want 'funid.external.mmseqs_Windows.bin' to be distributed and are 2023-06-24T08:19:17,318 already explicitly excluding 'funid.external.mmseqs_Windows.bin' via 2023-06-24T08:19:17,318 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,318 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,318 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,319 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,319 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,319 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,319 even if it does not contain any `.py` files. 2023-06-24T08:19:17,319 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,320 directory, all directories are treated like packages. 2023-06-24T08:19:17,320 ******************************************************************************** 2023-06-24T08:19:17,320 !! 2023-06-24T08:19:17,320 check.warn(importable) 2023-06-24T08:19:17,320 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.examples' is absent from the `packages` configuration. 2023-06-24T08:19:17,320 !! 2023-06-24T08:19:17,320 ******************************************************************************** 2023-06-24T08:19:17,321 ############################ 2023-06-24T08:19:17,321 # Package would be ignored # 2023-06-24T08:19:17,321 ############################ 2023-06-24T08:19:17,321 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package[^1], 2023-06-24T08:19:17,321 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,321 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,321 package, please make sure that 'funid.external.mmseqs_Windows.examples' is explicitly added 2023-06-24T08:19:17,321 to the `packages` configuration field. 2023-06-24T08:19:17,322 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,322 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,322 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,322 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,322 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,323 If you don't want 'funid.external.mmseqs_Windows.examples' to be distributed and are 2023-06-24T08:19:17,323 already explicitly excluding 'funid.external.mmseqs_Windows.examples' via 2023-06-24T08:19:17,323 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,323 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,323 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,323 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,324 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,324 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,324 even if it does not contain any `.py` files. 2023-06-24T08:19:17,324 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,324 directory, all directories are treated like packages. 2023-06-24T08:19:17,325 ******************************************************************************** 2023-06-24T08:19:17,325 !! 2023-06-24T08:19:17,325 check.warn(importable) 2023-06-24T08:19:17,325 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.matrices' is absent from the `packages` configuration. 2023-06-24T08:19:17,325 !! 2023-06-24T08:19:17,325 ******************************************************************************** 2023-06-24T08:19:17,325 ############################ 2023-06-24T08:19:17,326 # Package would be ignored # 2023-06-24T08:19:17,326 ############################ 2023-06-24T08:19:17,326 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package[^1], 2023-06-24T08:19:17,326 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,326 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,326 package, please make sure that 'funid.external.mmseqs_Windows.matrices' is explicitly added 2023-06-24T08:19:17,326 to the `packages` configuration field. 2023-06-24T08:19:17,327 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,327 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,327 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,327 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,327 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,327 If you don't want 'funid.external.mmseqs_Windows.matrices' to be distributed and are 2023-06-24T08:19:17,328 already explicitly excluding 'funid.external.mmseqs_Windows.matrices' via 2023-06-24T08:19:17,328 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,328 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,328 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,328 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,328 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,329 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,329 even if it does not contain any `.py` files. 2023-06-24T08:19:17,329 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,329 directory, all directories are treated like packages. 2023-06-24T08:19:17,329 ******************************************************************************** 2023-06-24T08:19:17,329 !! 2023-06-24T08:19:17,330 check.warn(importable) 2023-06-24T08:19:17,330 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.util' is absent from the `packages` configuration. 2023-06-24T08:19:17,330 !! 2023-06-24T08:19:17,330 ******************************************************************************** 2023-06-24T08:19:17,330 ############################ 2023-06-24T08:19:17,330 # Package would be ignored # 2023-06-24T08:19:17,330 ############################ 2023-06-24T08:19:17,330 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package[^1], 2023-06-24T08:19:17,331 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,331 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,331 package, please make sure that 'funid.external.mmseqs_Windows.util' is explicitly added 2023-06-24T08:19:17,331 to the `packages` configuration field. 2023-06-24T08:19:17,331 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,331 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,332 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,332 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,332 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,332 If you don't want 'funid.external.mmseqs_Windows.util' to be distributed and are 2023-06-24T08:19:17,332 already explicitly excluding 'funid.external.mmseqs_Windows.util' via 2023-06-24T08:19:17,332 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,333 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,333 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,333 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,333 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,333 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,334 even if it does not contain any `.py` files. 2023-06-24T08:19:17,334 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,334 directory, all directories are treated like packages. 2023-06-24T08:19:17,334 ******************************************************************************** 2023-06-24T08:19:17,334 !! 2023-06-24T08:19:17,334 check.warn(importable) 2023-06-24T08:19:17,334 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium' is absent from the `packages` configuration. 2023-06-24T08:19:17,335 !! 2023-06-24T08:19:17,335 ******************************************************************************** 2023-06-24T08:19:17,335 ############################ 2023-06-24T08:19:17,335 # Package would be ignored # 2023-06-24T08:19:17,335 ############################ 2023-06-24T08:19:17,335 Python recognizes 'funid.test_dataset.penicillium' as an importable package[^1], 2023-06-24T08:19:17,335 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,336 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,336 package, please make sure that 'funid.test_dataset.penicillium' is explicitly added 2023-06-24T08:19:17,336 to the `packages` configuration field. 2023-06-24T08:19:17,336 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,336 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,336 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,337 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,337 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,337 If you don't want 'funid.test_dataset.penicillium' to be distributed and are 2023-06-24T08:19:17,337 already explicitly excluding 'funid.test_dataset.penicillium' via 2023-06-24T08:19:17,337 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,337 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,338 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,338 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,338 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,338 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,338 even if it does not contain any `.py` files. 2023-06-24T08:19:17,339 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,339 directory, all directories are treated like packages. 2023-06-24T08:19:17,339 ******************************************************************************** 2023-06-24T08:19:17,339 !! 2023-06-24T08:19:17,339 check.warn(importable) 2023-06-24T08:19:17,339 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.DB' is absent from the `packages` configuration. 2023-06-24T08:19:17,339 !! 2023-06-24T08:19:17,340 ******************************************************************************** 2023-06-24T08:19:17,340 ############################ 2023-06-24T08:19:17,340 # Package would be ignored # 2023-06-24T08:19:17,340 ############################ 2023-06-24T08:19:17,340 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package[^1], 2023-06-24T08:19:17,340 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,340 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,340 package, please make sure that 'funid.test_dataset.penicillium.DB' is explicitly added 2023-06-24T08:19:17,341 to the `packages` configuration field. 2023-06-24T08:19:17,341 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,341 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,341 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,341 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,342 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,342 If you don't want 'funid.test_dataset.penicillium.DB' to be distributed and are 2023-06-24T08:19:17,342 already explicitly excluding 'funid.test_dataset.penicillium.DB' via 2023-06-24T08:19:17,342 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,342 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,342 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,343 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,343 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,343 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,343 even if it does not contain any `.py` files. 2023-06-24T08:19:17,343 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,343 directory, all directories are treated like packages. 2023-06-24T08:19:17,344 ******************************************************************************** 2023-06-24T08:19:17,344 !! 2023-06-24T08:19:17,344 check.warn(importable) 2023-06-24T08:19:17,344 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.Query' is absent from the `packages` configuration. 2023-06-24T08:19:17,344 !! 2023-06-24T08:19:17,344 ******************************************************************************** 2023-06-24T08:19:17,345 ############################ 2023-06-24T08:19:17,345 # Package would be ignored # 2023-06-24T08:19:17,345 ############################ 2023-06-24T08:19:17,345 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package[^1], 2023-06-24T08:19:17,345 but it is absent from setuptools' `packages` configuration. 2023-06-24T08:19:17,345 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-24T08:19:17,345 package, please make sure that 'funid.test_dataset.penicillium.Query' is explicitly added 2023-06-24T08:19:17,345 to the `packages` configuration field. 2023-06-24T08:19:17,346 Alternatively, you can also rely on setuptools' discovery methods 2023-06-24T08:19:17,346 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-24T08:19:17,346 instead of `find_packages(...)`/`find:`). 2023-06-24T08:19:17,346 You can read more about "package discovery" on setuptools documentation page: 2023-06-24T08:19:17,346 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-24T08:19:17,347 If you don't want 'funid.test_dataset.penicillium.Query' to be distributed and are 2023-06-24T08:19:17,347 already explicitly excluding 'funid.test_dataset.penicillium.Query' via 2023-06-24T08:19:17,347 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-24T08:19:17,347 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-24T08:19:17,347 combination with a more fine grained `package-data` configuration. 2023-06-24T08:19:17,347 You can read more about "package data files" on setuptools documentation page: 2023-06-24T08:19:17,348 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-24T08:19:17,348 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-24T08:19:17,348 even if it does not contain any `.py` files. 2023-06-24T08:19:17,348 On the other hand, currently there is no concept of package data 2023-06-24T08:19:17,348 directory, all directories are treated like packages. 2023-06-24T08:19:17,348 ******************************************************************************** 2023-06-24T08:19:17,349 !! 2023-06-24T08:19:17,349 check.warn(importable) 2023-06-24T08:19:17,349 creating build/lib/funid/external 2023-06-24T08:19:17,349 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2023-06-24T08:19:17,349 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2023-06-24T08:19:17,701 copying funid/external/__init__.py -> build/lib/funid/external 2023-06-24T08:19:17,703 creating build/lib/funid/external/BLAST_Windows 2023-06-24T08:19:17,703 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2023-06-24T08:19:17,707 creating build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:17,708 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:17,964 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:17,967 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:17,970 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:17,973 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:18,145 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:18,150 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-06-24T08:19:18,153 creating build/lib/funid/external/BLAST_Windows/doc 2023-06-24T08:19:18,153 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2023-06-24T08:19:18,156 creating build/lib/funid/external/FastTree_Windows 2023-06-24T08:19:18,156 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2023-06-24T08:19:18,163 creating build/lib/funid/external/Gblocks_Windows_0.91b 2023-06-24T08:19:18,164 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:18,165 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:18,171 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:18,173 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:18,175 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-24T08:19:18,176 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-24T08:19:18,179 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:18,180 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:18,183 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:18,185 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:18,187 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:18,189 creating build/lib/funid/external/RAxML_Windows 2023-06-24T08:19:18,190 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2023-06-24T08:19:18,193 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2023-06-24T08:19:18,195 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-06-24T08:19:18,220 creating build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:18,221 copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:18,256 copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:18,259 copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:18,265 copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:18,269 creating build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-24T08:19:18,270 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-24T08:19:18,408 copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-24T08:19:18,430 creating build/lib/funid/external/mmseqs_Windows 2023-06-24T08:19:18,431 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2023-06-24T08:19:18,434 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2023-06-24T08:19:18,438 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2023-06-24T08:19:18,440 creating build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,441 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,454 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,458 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,462 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,469 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,500 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,555 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,559 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:18,752 creating build/lib/funid/external/mmseqs_Windows/examples 2023-06-24T08:19:18,753 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-06-24T08:19:18,761 creating build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,762 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,764 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,766 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,769 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,771 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,773 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,775 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,777 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,779 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,781 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,783 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,786 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,788 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,790 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,792 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,794 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,797 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,799 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,801 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,803 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,806 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,808 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,810 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,812 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,814 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,817 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,819 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,821 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,823 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,826 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,828 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,830 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,832 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,835 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,837 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,839 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,841 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,844 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,846 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,848 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,851 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,853 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:18,855 creating build/lib/funid/external/mmseqs_Windows/util 2023-06-24T08:19:18,856 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2023-06-24T08:19:18,859 creating build/lib/funid/external/trimal.v1.2rev59 2023-06-24T08:19:18,859 creating build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:18,860 copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:18,863 copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:18,865 copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:18,868 copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:18,870 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-24T08:19:18,871 copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-24T08:19:18,884 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,885 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,890 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,893 copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,895 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,898 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,901 copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,905 copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,908 copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,911 copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,916 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,918 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,921 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,924 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,927 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,930 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,933 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,935 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,938 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,941 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,944 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,948 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,950 copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:18,953 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2023-06-24T08:19:18,956 copying funid/data/genus_line.txt -> build/lib/funid/data 2023-06-24T08:19:18,960 creating build/lib/funid/test_dataset 2023-06-24T08:19:18,961 creating build/lib/funid/test_dataset/penicillium 2023-06-24T08:19:18,962 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2023-06-24T08:19:18,965 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2023-06-24T08:19:18,967 creating build/lib/funid/test_dataset/penicillium/DB 2023-06-24T08:19:18,968 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2023-06-24T08:19:18,977 creating build/lib/funid/test_dataset/penicillium/Query 2023-06-24T08:19:18,978 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2023-06-24T08:19:18,981 creating build/lib/funid/preset 2023-06-24T08:19:18,983 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2023-06-24T08:19:18,985 copying funid/preset/fast.yaml -> build/lib/funid/preset 2023-06-24T08:19:19,020 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-24T08:19:19,020 !! 2023-06-24T08:19:19,021 ******************************************************************************** 2023-06-24T08:19:19,021 Please avoid running ``setup.py`` directly. 2023-06-24T08:19:19,021 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-24T08:19:19,021 other standards-based tools. 2023-06-24T08:19:19,021 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-24T08:19:19,021 ******************************************************************************** 2023-06-24T08:19:19,021 !! 2023-06-24T08:19:19,022 self.initialize_options() 2023-06-24T08:19:19,050 installing to build/bdist.linux-armv7l/wheel 2023-06-24T08:19:19,051 running install 2023-06-24T08:19:19,076 running install_lib 2023-06-24T08:19:19,114 creating build/bdist.linux-armv7l 2023-06-24T08:19:19,115 creating build/bdist.linux-armv7l/wheel 2023-06-24T08:19:19,118 creating build/bdist.linux-armv7l/wheel/funid 2023-06-24T08:19:19,120 creating build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,122 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,126 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,129 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,132 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,136 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,139 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,142 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,147 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,150 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,152 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,156 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,159 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,162 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,165 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,167 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,172 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,174 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,179 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,182 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,185 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,187 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,188 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,191 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,194 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,197 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,199 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-24T08:19:19,202 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-24T08:19:19,205 creating build/bdist.linux-armv7l/wheel/funid/data 2023-06-24T08:19:19,206 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-24T08:19:19,210 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-24T08:19:19,212 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-24T08:19:19,215 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2023-06-24T08:19:19,217 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-24T08:19:19,218 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-24T08:19:19,220 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-24T08:19:19,223 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-06-24T08:19:19,224 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-06-24T08:19:19,235 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-06-24T08:19:19,236 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-06-24T08:19:19,239 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-24T08:19:19,242 creating build/bdist.linux-armv7l/wheel/funid/preset 2023-06-24T08:19:19,244 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-06-24T08:19:19,246 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-06-24T08:19:19,248 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-24T08:19:19,251 creating build/bdist.linux-armv7l/wheel/funid/external 2023-06-24T08:19:19,252 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2023-06-24T08:19:19,254 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:19,256 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-24T08:19:19,258 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-24T08:19:19,262 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:19,263 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:19,266 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:19,269 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:19,271 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-24T08:19:19,274 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:19,276 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:19,282 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-24T08:19:19,284 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-24T08:19:19,285 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-24T08:19:19,287 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-24T08:19:19,289 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-24T08:19:19,322 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-24T08:19:19,713 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-06-24T08:19:19,714 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-06-24T08:19:19,722 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-06-24T08:19:19,723 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-06-24T08:19:19,727 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-06-24T08:19:19,729 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-06-24T08:19:19,731 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:19,732 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:19,738 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:19,742 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:19,930 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:19,932 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:19,935 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:20,183 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-24T08:19:20,186 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:20,187 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:20,190 copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:20,195 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:20,197 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-24T08:19:20,198 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-24T08:19:20,221 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-24T08:19:20,375 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-24T08:19:20,408 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-24T08:19:20,411 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-24T08:19:20,413 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59 2023-06-24T08:19:20,414 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:20,416 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:20,418 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:20,420 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:20,423 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,424 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,428 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,430 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,432 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,435 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,438 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,440 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,443 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,445 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,447 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,450 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,453 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,455 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,458 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,461 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,463 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,465 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,469 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,471 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,473 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,475 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,478 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-24T08:19:20,480 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-24T08:19:20,481 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-24T08:19:20,499 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-24T08:19:20,501 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-24T08:19:20,503 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-06-24T08:19:20,504 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-06-24T08:19:20,513 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-24T08:19:20,517 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,518 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,520 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,522 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,524 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,526 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,528 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,529 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,531 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,533 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,535 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,536 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,538 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,540 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,541 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,543 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,545 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,547 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,548 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,550 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,552 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,554 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,556 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,558 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,559 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,561 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,563 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,565 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,566 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,568 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,570 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,572 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,573 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,575 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,577 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,579 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,581 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,583 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,585 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,586 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,588 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,590 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,592 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-24T08:19:20,594 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-24T08:19:20,597 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-06-24T08:19:20,598 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-06-24T08:19:20,600 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-24T08:19:20,603 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,604 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,786 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,792 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,795 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,806 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,839 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,895 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,899 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-24T08:19:20,902 running install_egg_info 2023-06-24T08:19:20,933 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.11.0-py3.9.egg-info 2023-06-24T08:19:20,945 running install_scripts 2023-06-24T08:19:20,966 creating build/bdist.linux-armv7l/wheel/FunID-0.3.11.0.dist-info/WHEEL 2023-06-24T08:19:20,968 creating '/tmp/pip-wheel-m91hc0ur/FunID-0.3.11.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-24T08:19:20,972 adding 'funid/FunID_GUI.py' 2023-06-24T08:19:20,974 adding 'funid/__init__.py' 2023-06-24T08:19:20,976 adding 'funid/main.py' 2023-06-24T08:19:20,979 adding 'funid/data/Option_manager.xlsx' 2023-06-24T08:19:20,981 adding 'funid/data/__init__.py' 2023-06-24T08:19:20,989 adding 'funid/data/genus_line.txt' 2023-06-24T08:19:20,996 adding 'funid/external/MAFFT_LICENSE' 2023-06-24T08:19:24,059 adding 'funid/external/MAFFT_Windows.zip' 2023-06-24T08:19:24,227 adding 'funid/external/__init__.py' 2023-06-24T08:19:24,236 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2023-06-24T08:19:27,212 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2023-06-24T08:19:27,318 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2023-06-24T08:19:27,320 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2023-06-24T08:19:27,324 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2023-06-24T08:19:29,395 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2023-06-24T08:19:29,494 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2023-06-24T08:19:29,499 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2023-06-24T08:19:29,501 adding 'funid/external/BLAST_Windows/doc/README.txt' 2023-06-24T08:19:29,558 adding 'funid/external/FastTree_Windows/FastTree.exe' 2023-06-24T08:19:29,599 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2023-06-24T08:19:29,602 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2023-06-24T08:19:29,603 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2023-06-24T08:19:29,609 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2023-06-24T08:19:29,611 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2023-06-24T08:19:29,613 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2023-06-24T08:19:29,615 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2023-06-24T08:19:29,618 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2023-06-24T08:19:29,624 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2023-06-24T08:19:29,626 adding 'funid/external/RAxML_Windows/README' 2023-06-24T08:19:29,919 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2023-06-24T08:19:30,013 adding 'funid/external/iqtree-2.1.3-Windows/example.cf' 2023-06-24T08:19:30,029 adding 'funid/external/iqtree-2.1.3-Windows/example.nex' 2023-06-24T08:19:30,042 adding 'funid/external/iqtree-2.1.3-Windows/example.phy' 2023-06-24T08:19:30,072 adding 'funid/external/iqtree-2.1.3-Windows/models.nex' 2023-06-24T08:19:31,800 adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe' 2023-06-24T08:19:32,050 adding 'funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll' 2023-06-24T08:19:32,064 adding 'funid/external/mmseqs_Windows/LICENSE.md' 2023-06-24T08:19:32,067 adding 'funid/external/mmseqs_Windows/README.md' 2023-06-24T08:19:32,068 adding 'funid/external/mmseqs_Windows/mmseqs.bat' 2023-06-24T08:19:32,202 adding 'funid/external/mmseqs_Windows/bin/busybox.exe' 2023-06-24T08:19:32,216 adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll' 2023-06-24T08:19:32,230 adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2023-06-24T08:19:32,273 adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll' 2023-06-24T08:19:32,540 adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2023-06-24T08:19:33,142 adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll' 2023-06-24T08:19:33,179 adding 'funid/external/mmseqs_Windows/bin/cygz.dll' 2023-06-24T08:19:36,600 adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe' 2023-06-24T08:19:36,745 adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta' 2023-06-24T08:19:36,749 adding 'funid/external/mmseqs_Windows/matrices/PAM10.out' 2023-06-24T08:19:36,750 adding 'funid/external/mmseqs_Windows/matrices/PAM100.out' 2023-06-24T08:19:36,752 adding 'funid/external/mmseqs_Windows/matrices/PAM110.out' 2023-06-24T08:19:36,753 adding 'funid/external/mmseqs_Windows/matrices/PAM120.out' 2023-06-24T08:19:36,754 adding 'funid/external/mmseqs_Windows/matrices/PAM130.out' 2023-06-24T08:19:36,756 adding 'funid/external/mmseqs_Windows/matrices/PAM140.out' 2023-06-24T08:19:36,757 adding 'funid/external/mmseqs_Windows/matrices/PAM150.out' 2023-06-24T08:19:36,758 adding 'funid/external/mmseqs_Windows/matrices/PAM160.out' 2023-06-24T08:19:36,760 adding 'funid/external/mmseqs_Windows/matrices/PAM170.out' 2023-06-24T08:19:36,761 adding 'funid/external/mmseqs_Windows/matrices/PAM180.out' 2023-06-24T08:19:36,762 adding 'funid/external/mmseqs_Windows/matrices/PAM190.out' 2023-06-24T08:19:36,763 adding 'funid/external/mmseqs_Windows/matrices/PAM20.out' 2023-06-24T08:19:36,765 adding 'funid/external/mmseqs_Windows/matrices/PAM30.out' 2023-06-24T08:19:36,766 adding 'funid/external/mmseqs_Windows/matrices/PAM40.out' 2023-06-24T08:19:36,768 adding 'funid/external/mmseqs_Windows/matrices/PAM50.out' 2023-06-24T08:19:36,769 adding 'funid/external/mmseqs_Windows/matrices/PAM60.out' 2023-06-24T08:19:36,770 adding 'funid/external/mmseqs_Windows/matrices/PAM70.out' 2023-06-24T08:19:36,772 adding 'funid/external/mmseqs_Windows/matrices/PAM80.out' 2023-06-24T08:19:36,773 adding 'funid/external/mmseqs_Windows/matrices/PAM90.out' 2023-06-24T08:19:36,774 adding 'funid/external/mmseqs_Windows/matrices/VTML10.out' 2023-06-24T08:19:36,776 adding 'funid/external/mmseqs_Windows/matrices/VTML120.out' 2023-06-24T08:19:36,777 adding 'funid/external/mmseqs_Windows/matrices/VTML160.out' 2023-06-24T08:19:36,778 adding 'funid/external/mmseqs_Windows/matrices/VTML20.out' 2023-06-24T08:19:36,780 adding 'funid/external/mmseqs_Windows/matrices/VTML40.out' 2023-06-24T08:19:36,781 adding 'funid/external/mmseqs_Windows/matrices/VTML80.out' 2023-06-24T08:19:36,783 adding 'funid/external/mmseqs_Windows/matrices/blosum100.out' 2023-06-24T08:19:36,784 adding 'funid/external/mmseqs_Windows/matrices/blosum30.out' 2023-06-24T08:19:36,786 adding 'funid/external/mmseqs_Windows/matrices/blosum35.out' 2023-06-24T08:19:36,788 adding 'funid/external/mmseqs_Windows/matrices/blosum40.out' 2023-06-24T08:19:36,789 adding 'funid/external/mmseqs_Windows/matrices/blosum45.out' 2023-06-24T08:19:36,791 adding 'funid/external/mmseqs_Windows/matrices/blosum50.out' 2023-06-24T08:19:36,792 adding 'funid/external/mmseqs_Windows/matrices/blosum55.out' 2023-06-24T08:19:36,794 adding 'funid/external/mmseqs_Windows/matrices/blosum60.out' 2023-06-24T08:19:36,795 adding 'funid/external/mmseqs_Windows/matrices/blosum62.out' 2023-06-24T08:19:36,797 adding 'funid/external/mmseqs_Windows/matrices/blosum65.out' 2023-06-24T08:19:36,798 adding 'funid/external/mmseqs_Windows/matrices/blosum70.out' 2023-06-24T08:19:36,800 adding 'funid/external/mmseqs_Windows/matrices/blosum75.out' 2023-06-24T08:19:36,801 adding 'funid/external/mmseqs_Windows/matrices/blosum80.out' 2023-06-24T08:19:36,803 adding 'funid/external/mmseqs_Windows/matrices/blosum85.out' 2023-06-24T08:19:36,804 adding 'funid/external/mmseqs_Windows/matrices/blosum90.out' 2023-06-24T08:19:36,806 adding 'funid/external/mmseqs_Windows/matrices/blosum95.out' 2023-06-24T08:19:36,807 adding 'funid/external/mmseqs_Windows/matrices/nucleotide.out' 2023-06-24T08:19:36,809 adding 'funid/external/mmseqs_Windows/util/bash-completion.sh' 2023-06-24T08:19:36,811 adding 'funid/external/trimal.v1.2rev59/trimAl/AUTHORS' 2023-06-24T08:19:36,812 adding 'funid/external/trimal.v1.2rev59/trimAl/CHANGELOG' 2023-06-24T08:19:36,818 adding 'funid/external/trimal.v1.2rev59/trimAl/LICENSE' 2023-06-24T08:19:36,820 adding 'funid/external/trimal.v1.2rev59/trimAl/README' 2023-06-24T08:19:36,911 adding 'funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe' 2023-06-24T08:19:36,922 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp' 2023-06-24T08:19:36,925 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.h' 2023-06-24T08:19:36,926 adding 'funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp' 2023-06-24T08:19:36,928 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp' 2023-06-24T08:19:36,930 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h' 2023-06-24T08:19:36,934 adding 'funid/external/trimal.v1.2rev59/trimAl/source/main.cpp' 2023-06-24T08:19:36,936 adding 'funid/external/trimal.v1.2rev59/trimAl/source/makefile' 2023-06-24T08:19:36,938 adding 'funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp' 2023-06-24T08:19:36,942 adding 'funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp' 2023-06-24T08:19:36,944 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp' 2023-06-24T08:19:36,946 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h' 2023-06-24T08:19:36,948 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp' 2023-06-24T08:19:36,949 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h' 2023-06-24T08:19:36,951 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp' 2023-06-24T08:19:36,953 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h' 2023-06-24T08:19:36,954 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp' 2023-06-24T08:19:36,956 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h' 2023-06-24T08:19:36,958 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp' 2023-06-24T08:19:36,960 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h' 2023-06-24T08:19:36,961 adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp' 2023-06-24T08:19:36,963 adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.h' 2023-06-24T08:19:36,964 adding 'funid/external/trimal.v1.2rev59/trimAl/source/values.h' 2023-06-24T08:19:36,966 adding 'funid/preset/accurate.yaml' 2023-06-24T08:19:36,967 adding 'funid/preset/fast.yaml' 2023-06-24T08:19:36,969 adding 'funid/src/__init__.py' 2023-06-24T08:19:36,970 adding 'funid/src/align.py' 2023-06-24T08:19:36,973 adding 'funid/src/cluster.py' 2023-06-24T08:19:36,975 adding 'funid/src/command.py' 2023-06-24T08:19:36,977 adding 'funid/src/concatenate.py' 2023-06-24T08:19:36,979 adding 'funid/src/dataset.py' 2023-06-24T08:19:36,981 adding 'funid/src/ext.py' 2023-06-24T08:19:36,983 adding 'funid/src/hasher.py' 2023-06-24T08:19:36,985 adding 'funid/src/initialize.py' 2023-06-24T08:19:36,986 adding 'funid/src/logger.py' 2023-06-24T08:19:36,988 adding 'funid/src/logics.py' 2023-06-24T08:19:36,991 adding 'funid/src/manage_input.py' 2023-06-24T08:19:36,993 adding 'funid/src/modeltest.py' 2023-06-24T08:19:36,995 adding 'funid/src/ncbi.py' 2023-06-24T08:19:36,996 adding 'funid/src/opt_generator.py' 2023-06-24T08:19:36,998 adding 'funid/src/patch.py' 2023-06-24T08:19:37,001 adding 'funid/src/reporter.py' 2023-06-24T08:19:37,003 adding 'funid/src/save.py' 2023-06-24T08:19:37,005 adding 'funid/src/search.py' 2023-06-24T08:19:37,007 adding 'funid/src/tool.py' 2023-06-24T08:19:37,009 adding 'funid/src/tree.py' 2023-06-24T08:19:37,013 adding 'funid/src/tree_interpretation.py' 2023-06-24T08:19:37,016 adding 'funid/src/tree_interpretation_pipe.py' 2023-06-24T08:19:37,018 adding 'funid/src/trim.py' 2023-06-24T08:19:37,023 adding 'funid/src/validate_option.py' 2023-06-24T08:19:37,025 adding 'funid/src/validation.py' 2023-06-24T08:19:37,027 adding 'funid/test_dataset/penicillium/Options.config' 2023-06-24T08:19:37,028 adding 'funid/test_dataset/penicillium/preset.yaml' 2023-06-24T08:19:37,066 adding 'funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx' 2023-06-24T08:19:37,073 adding 'funid/test_dataset/penicillium/Query/Query.xlsx' 2023-06-24T08:19:37,080 adding 'FunID-0.3.11.0.dist-info/LICENSE' 2023-06-24T08:19:37,081 adding 'FunID-0.3.11.0.dist-info/METADATA' 2023-06-24T08:19:37,082 adding 'FunID-0.3.11.0.dist-info/WHEEL' 2023-06-24T08:19:37,083 adding 'FunID-0.3.11.0.dist-info/entry_points.txt' 2023-06-24T08:19:37,084 adding 'FunID-0.3.11.0.dist-info/top_level.txt' 2023-06-24T08:19:37,086 adding 'FunID-0.3.11.0.dist-info/RECORD' 2023-06-24T08:19:37,490 removing build/bdist.linux-armv7l/wheel 2023-06-24T08:19:37,642 Building wheel for funid (setup.py): finished with status 'done' 2023-06-24T08:19:38,149 Created wheel for funid: filename=FunID-0.3.11.0-py3-none-any.whl size=51527461 sha256=6e60d72632ca2cf07c0ec2c903a5e044eef646e76848189b805d20736850ce33 2023-06-24T08:19:38,150 Stored in directory: /tmp/pip-ephem-wheel-cache-jb60mpkg/wheels/91/f2/34/b853a912e07d3e719b6aa0252967dde50f1223e16bee0e7d04 2023-06-24T08:19:38,182 Successfully built funid 2023-06-24T08:19:39,383 Removed build tracker: '/tmp/pip-build-tracker-wyvkj_ii'