2023-06-26T17:26:31,173 Created temporary directory: /tmp/pip-build-tracker-r78668kp
2023-06-26T17:26:31,175 Initialized build tracking at /tmp/pip-build-tracker-r78668kp
2023-06-26T17:26:31,175 Created build tracker: /tmp/pip-build-tracker-r78668kp
2023-06-26T17:26:31,175 Entered build tracker: /tmp/pip-build-tracker-r78668kp
2023-06-26T17:26:31,176 Created temporary directory: /tmp/pip-wheel-de6oj3l9
2023-06-26T17:26:31,179 Created temporary directory: /tmp/pip-ephem-wheel-cache-icild8cm
2023-06-26T17:26:31,206 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-26T17:26:31,209 2 location(s) to search for versions of cpdb-protein:
2023-06-26T17:26:31,209 * https://pypi.org/simple/cpdb-protein/
2023-06-26T17:26:31,209 * https://www.piwheels.org/simple/cpdb-protein/
2023-06-26T17:26:31,210 Fetching project page and analyzing links: https://pypi.org/simple/cpdb-protein/
2023-06-26T17:26:31,210 Getting page https://pypi.org/simple/cpdb-protein/
2023-06-26T17:26:31,212 Found index url https://pypi.org/simple/
2023-06-26T17:26:31,270 Fetched page https://pypi.org/simple/cpdb-protein/ as application/vnd.pypi.simple.v1+json
2023-06-26T17:26:31,271   Found link https://files.pythonhosted.org/packages/ed/58/a6f6d0924c7e4be968b8703eec99179403a13ce5e143660abef310a7717b/cpdb-protein-0.0.2.tar.gz (from https://pypi.org/simple/cpdb-protein/), version: 0.0.2
2023-06-26T17:26:31,272   Found link https://files.pythonhosted.org/packages/e6/25/653305959ded3d2da61b6c6d859fb1250c891728f1f821b329b4a808433c/cpdb-protein-0.1.0.tar.gz (from https://pypi.org/simple/cpdb-protein/), version: 0.1.0
2023-06-26T17:26:31,272   Found link https://files.pythonhosted.org/packages/bc/7d/207dd68c474541c4000f61ce823a1c1d2f0a431a63d4f4679b77aab6048f/cpdb-protein-0.2.0.tar.gz (from https://pypi.org/simple/cpdb-protein/), version: 0.2.0
2023-06-26T17:26:31,272 Fetching project page and analyzing links: https://www.piwheels.org/simple/cpdb-protein/
2023-06-26T17:26:31,273 Getting page https://www.piwheels.org/simple/cpdb-protein/
2023-06-26T17:26:31,273 Found index url https://www.piwheels.org/simple/
2023-06-26T17:26:31,438 Fetched page https://www.piwheels.org/simple/cpdb-protein/ as text/html
2023-06-26T17:26:31,442   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=11318001e946ad005126a5189bc2779bdb4dd3939ae064d075a268bb798b96f2 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,442   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=11318001e946ad005126a5189bc2779bdb4dd3939ae064d075a268bb798b96f2 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,442   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=b63d4d4b0f6f896667bc095a4452c0f770b56197f24b95fbb4ee73d95b0429b2 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,443   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=b63d4d4b0f6f896667bc095a4452c0f770b56197f24b95fbb4ee73d95b0429b2 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,443   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=3687d224de19ddc0ac28fd68b69e64b178ac18fc406680daa254e74302d9d286 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,443   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=3687d224de19ddc0ac28fd68b69e64b178ac18fc406680daa254e74302d9d286 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,443   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=20b2a381b6c48b7d95899055fcaedad232305b5e3e72404912e427110ca2af51 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,443   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=20b2a381b6c48b7d95899055fcaedad232305b5e3e72404912e427110ca2af51 (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,444   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=1bb3a8682dcca32281b7e6f610373ebf0e762ad6e260460f0c7036cfb7263c8a (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,444   Skipping link: No binaries permitted for cpdb-protein: https://www.piwheels.org/simple/cpdb-protein/cpdb_protein-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=1bb3a8682dcca32281b7e6f610373ebf0e762ad6e260460f0c7036cfb7263c8a (from https://www.piwheels.org/simple/cpdb-protein/)
2023-06-26T17:26:31,444 Skipping link: not a file: https://www.piwheels.org/simple/cpdb-protein/
2023-06-26T17:26:31,444 Skipping link: not a file: https://pypi.org/simple/cpdb-protein/
2023-06-26T17:26:31,462 Given no hashes to check 1 links for project 'cpdb-protein': discarding no candidates
2023-06-26T17:26:31,478 Collecting cpdb-protein==0.2.0
2023-06-26T17:26:31,480   Created temporary directory: /tmp/pip-unpack-s38g3zcq
2023-06-26T17:26:31,525   Downloading cpdb-protein-0.2.0.tar.gz (68 kB)
2023-06-26T17:26:31,599   Added cpdb-protein==0.2.0 from https://files.pythonhosted.org/packages/bc/7d/207dd68c474541c4000f61ce823a1c1d2f0a431a63d4f4679b77aab6048f/cpdb-protein-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-r78668kp'
2023-06-26T17:26:31,605   Created temporary directory: /tmp/pip-build-env-2j669ty2
2023-06-26T17:26:31,616   Installing build dependencies: started
2023-06-26T17:26:31,617   Running command pip subprocess to install build dependencies
2023-06-26T17:26:32,809   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-06-26T17:26:33,176   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-26T17:26:34,855   Collecting setuptools
2023-06-26T17:26:34,921     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB)
2023-06-26T17:26:35,196   Collecting wheel
2023-06-26T17:26:35,214     Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB)
2023-06-26T17:26:36,667   Collecting Cython>=0.29
2023-06-26T17:26:37,057     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.35-cp39-cp39-linux_armv7l.whl (5.0 MB)
2023-06-26T17:26:38,392   Collecting numpy>=1.15
2023-06-26T17:26:39,277     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.0-cp39-cp39-linux_armv7l.whl (12.5 MB)
2023-06-26T17:26:41,467   Installing collected packages: wheel, setuptools, numpy, Cython
2023-06-26T17:26:41,911     Creating /tmp/pip-build-env-2j669ty2/overlay/bin
2023-06-26T17:26:41,914     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/wheel to 755
2023-06-26T17:26:52,598     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/f2py to 755
2023-06-26T17:26:52,600     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/f2py3 to 755
2023-06-26T17:26:52,603     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/f2py3.9 to 755
2023-06-26T17:26:55,570     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/cygdb to 755
2023-06-26T17:26:55,572     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/cython to 755
2023-06-26T17:26:55,575     changing mode of /tmp/pip-build-env-2j669ty2/overlay/bin/cythonize to 755
2023-06-26T17:26:55,600   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2023-06-26T17:26:55,600   scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.0 which is incompatible.
2023-06-26T17:26:55,601   Successfully installed Cython-0.29.35 numpy-1.25.0 setuptools-68.0.0 wheel-0.40.0
2023-06-26T17:26:55,987   Installing build dependencies: finished with status 'done'
2023-06-26T17:26:55,997   Getting requirements to build wheel: started
2023-06-26T17:26:55,998   Running command Getting requirements to build wheel
2023-06-26T17:26:58,842   Compiling cpdb/parser.pyx because it depends on /tmp/pip-build-env-2j669ty2/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-06-26T17:26:58,842   [1/1] Cythonizing cpdb/parser.pyx
2023-06-26T17:26:59,079   Getting requirements to build wheel: finished with status 'done'
2023-06-26T17:26:59,091   Created temporary directory: /tmp/pip-modern-metadata-q824t_0n
2023-06-26T17:26:59,093   Preparing metadata (pyproject.toml): started
2023-06-26T17:26:59,094   Running command Preparing metadata (pyproject.toml)
2023-06-26T17:27:00,624   running dist_info
2023-06-26T17:27:00,645   creating /tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info
2023-06-26T17:27:00,650   writing /tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/PKG-INFO
2023-06-26T17:27:00,652   writing dependency_links to /tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/dependency_links.txt
2023-06-26T17:27:00,654   writing requirements to /tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/requires.txt
2023-06-26T17:27:00,655   writing top-level names to /tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/top_level.txt
2023-06-26T17:27:00,657   writing manifest file '/tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/SOURCES.txt'
2023-06-26T17:27:00,683   reading manifest file '/tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/SOURCES.txt'
2023-06-26T17:27:00,685   reading manifest template 'MANIFEST.in'
2023-06-26T17:27:00,687   adding license file 'LICENSE'
2023-06-26T17:27:00,689   writing manifest file '/tmp/pip-modern-metadata-q824t_0n/cpdb_protein.egg-info/SOURCES.txt'
2023-06-26T17:27:00,690   creating '/tmp/pip-modern-metadata-q824t_0n/cpdb_protein-0.2.0.dist-info'
2023-06-26T17:27:00,913   Preparing metadata (pyproject.toml): finished with status 'done'
2023-06-26T17:27:00,919   Source in /tmp/pip-wheel-de6oj3l9/cpdb-protein_fe3c006a327248c8ad9306d62f3a6aae has version 0.2.0, which satisfies requirement cpdb-protein==0.2.0 from https://files.pythonhosted.org/packages/bc/7d/207dd68c474541c4000f61ce823a1c1d2f0a431a63d4f4679b77aab6048f/cpdb-protein-0.2.0.tar.gz
2023-06-26T17:27:00,920   Removed cpdb-protein==0.2.0 from https://files.pythonhosted.org/packages/bc/7d/207dd68c474541c4000f61ce823a1c1d2f0a431a63d4f4679b77aab6048f/cpdb-protein-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-r78668kp'
2023-06-26T17:27:00,924 Created temporary directory: /tmp/pip-unpack-0dgu_nro
2023-06-26T17:27:00,925 Building wheels for collected packages: cpdb-protein
2023-06-26T17:27:00,929   Created temporary directory: /tmp/pip-wheel-qisku1yq
2023-06-26T17:27:00,930   Destination directory: /tmp/pip-wheel-qisku1yq
2023-06-26T17:27:00,932   Building wheel for cpdb-protein (pyproject.toml): started
2023-06-26T17:27:00,933   Running command Building wheel for cpdb-protein (pyproject.toml)
2023-06-26T17:27:02,434   running bdist_wheel
2023-06-26T17:27:02,458   running build
2023-06-26T17:27:02,459   running build_py
2023-06-26T17:27:02,468   creating build
2023-06-26T17:27:02,468   creating build/lib.linux-armv7l-cpython-39
2023-06-26T17:27:02,469   creating build/lib.linux-armv7l-cpython-39/cpdb
2023-06-26T17:27:02,470   copying cpdb/__init__.py -> build/lib.linux-armv7l-cpython-39/cpdb
2023-06-26T17:27:02,472   running build_ext
2023-06-26T17:27:02,478   building 'cpdb.parser' extension
2023-06-26T17:27:02,478   creating build/temp.linux-armv7l-cpython-39
2023-06-26T17:27:02,479   creating build/temp.linux-armv7l-cpython-39/cpdb
2023-06-26T17:27:02,480   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-2j669ty2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c cpdb/parser.c -o build/temp.linux-armv7l-cpython-39/cpdb/parser.o
2023-06-26T17:27:02,824   In file included from /tmp/pip-build-env-2j669ty2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-06-26T17:27:02,825                    from /tmp/pip-build-env-2j669ty2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-06-26T17:27:02,825                    from /tmp/pip-build-env-2j669ty2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-06-26T17:27:02,825                    from cpdb/parser.c:763:
2023-06-26T17:27:02,825   /tmp/pip-build-env-2j669ty2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-06-26T17:27:02,825      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-06-26T17:27:02,825         |  ^~~~~~~
2023-06-26T17:27:13,421   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/cpdb/parser.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/cpdb/parser.cpython-39-arm-linux-gnueabihf.so
2023-06-26T17:27:13,566   installing to build/bdist.linux-armv7l/wheel
2023-06-26T17:27:13,566   running install
2023-06-26T17:27:13,592   running install_lib
2023-06-26T17:27:13,603   creating build/bdist.linux-armv7l
2023-06-26T17:27:13,603   creating build/bdist.linux-armv7l/wheel
2023-06-26T17:27:13,605   creating build/bdist.linux-armv7l/wheel/cpdb
2023-06-26T17:27:13,606   copying build/lib.linux-armv7l-cpython-39/cpdb/parser.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/cpdb
2023-06-26T17:27:13,616   copying build/lib.linux-armv7l-cpython-39/cpdb/__init__.py -> build/bdist.linux-armv7l/wheel/cpdb
2023-06-26T17:27:13,618   running install_egg_info
2023-06-26T17:27:13,675   running egg_info
2023-06-26T17:27:13,681   writing cpdb_protein.egg-info/PKG-INFO
2023-06-26T17:27:13,684   writing dependency_links to cpdb_protein.egg-info/dependency_links.txt
2023-06-26T17:27:13,686   writing requirements to cpdb_protein.egg-info/requires.txt
2023-06-26T17:27:13,688   writing top-level names to cpdb_protein.egg-info/top_level.txt
2023-06-26T17:27:13,697   reading manifest file 'cpdb_protein.egg-info/SOURCES.txt'
2023-06-26T17:27:13,700   reading manifest template 'MANIFEST.in'
2023-06-26T17:27:13,702   adding license file 'LICENSE'
2023-06-26T17:27:13,704   writing manifest file 'cpdb_protein.egg-info/SOURCES.txt'
2023-06-26T17:27:13,706   Copying cpdb_protein.egg-info to build/bdist.linux-armv7l/wheel/cpdb_protein-0.2.0-py3.9.egg-info
2023-06-26T17:27:13,716   running install_scripts
2023-06-26T17:27:13,763   creating build/bdist.linux-armv7l/wheel/cpdb_protein-0.2.0.dist-info/WHEEL
2023-06-26T17:27:13,766   creating '/tmp/pip-wheel-qisku1yq/.tmp-1rybuj07/cpdb_protein-0.2.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-26T17:27:13,769   adding 'cpdb/__init__.py'
2023-06-26T17:27:13,867   adding 'cpdb/parser.cpython-39-arm-linux-gnueabihf.so'
2023-06-26T17:27:13,873   adding 'cpdb_protein-0.2.0.dist-info/LICENSE'
2023-06-26T17:27:13,874   adding 'cpdb_protein-0.2.0.dist-info/METADATA'
2023-06-26T17:27:13,876   adding 'cpdb_protein-0.2.0.dist-info/WHEEL'
2023-06-26T17:27:13,877   adding 'cpdb_protein-0.2.0.dist-info/top_level.txt'
2023-06-26T17:27:13,878   adding 'cpdb_protein-0.2.0.dist-info/RECORD'
2023-06-26T17:27:13,881   removing build/bdist.linux-armv7l/wheel
2023-06-26T17:27:14,038   Building wheel for cpdb-protein (pyproject.toml): finished with status 'done'
2023-06-26T17:27:14,047   Created wheel for cpdb-protein: filename=cpdb_protein-0.2.0-cp39-cp39-linux_armv7l.whl size=186387 sha256=acdf396dae9feafe2225637cec59b62895fe71c39b795ca9d182e43b4a20d529
2023-06-26T17:27:14,048   Stored in directory: /tmp/pip-ephem-wheel-cache-icild8cm/wheels/15/be/2f/b1d0c3acd67f7e5e88182d18da55860ec044eade989c8ed74d
2023-06-26T17:27:14,058 Successfully built cpdb-protein
2023-06-26T17:27:14,068 Removed build tracker: '/tmp/pip-build-tracker-r78668kp'