2023-06-26T18:04:28,977 Created temporary directory: /tmp/pip-build-tracker-ylga0b3e 2023-06-26T18:04:28,980 Initialized build tracking at /tmp/pip-build-tracker-ylga0b3e 2023-06-26T18:04:28,980 Created build tracker: /tmp/pip-build-tracker-ylga0b3e 2023-06-26T18:04:28,980 Entered build tracker: /tmp/pip-build-tracker-ylga0b3e 2023-06-26T18:04:28,982 Created temporary directory: /tmp/pip-wheel-otsy484q 2023-06-26T18:04:28,990 Created temporary directory: /tmp/pip-ephem-wheel-cache-qbm_by3v 2023-06-26T18:04:29,048 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-26T18:04:29,056 2 location(s) to search for versions of annomate: 2023-06-26T18:04:29,056 * https://pypi.org/simple/annomate/ 2023-06-26T18:04:29,056 * https://www.piwheels.org/simple/annomate/ 2023-06-26T18:04:29,057 Fetching project page and analyzing links: https://pypi.org/simple/annomate/ 2023-06-26T18:04:29,058 Getting page https://pypi.org/simple/annomate/ 2023-06-26T18:04:29,063 Found index url https://pypi.org/simple/ 2023-06-26T18:04:29,260 Fetched page https://pypi.org/simple/annomate/ as application/vnd.pypi.simple.v1+json 2023-06-26T18:04:29,263 Found link https://files.pythonhosted.org/packages/f6/9c/e8f438b02f2ee63d29f645b6355e6bd6b247fa52ac9886fdeea558a8d7fb/AnnoMate-0.0.0.tar.gz (from https://pypi.org/simple/annomate/) (requires-python:>=3.6), version: 0.0.0 2023-06-26T18:04:29,264 Fetching project page and analyzing links: https://www.piwheels.org/simple/annomate/ 2023-06-26T18:04:29,264 Getting page https://www.piwheels.org/simple/annomate/ 2023-06-26T18:04:29,266 Found index url https://www.piwheels.org/simple/ 2023-06-26T18:04:29,481 Fetched page https://www.piwheels.org/simple/annomate/ as text/html 2023-06-26T18:04:29,483 Skipping link: not a file: https://www.piwheels.org/simple/annomate/ 2023-06-26T18:04:29,483 Skipping link: not a file: https://pypi.org/simple/annomate/ 2023-06-26T18:04:29,516 Given no hashes to check 1 links for project 'annomate': discarding no candidates 2023-06-26T18:04:29,547 Collecting annomate==0.0.0 2023-06-26T18:04:29,551 Created temporary directory: /tmp/pip-unpack-_oa_i52_ 2023-06-26T18:04:29,731 Downloading AnnoMate-0.0.0.tar.gz (39 kB) 2023-06-26T18:04:29,889 Added annomate==0.0.0 from https://files.pythonhosted.org/packages/f6/9c/e8f438b02f2ee63d29f645b6355e6bd6b247fa52ac9886fdeea558a8d7fb/AnnoMate-0.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-ylga0b3e' 2023-06-26T18:04:29,896 Created temporary directory: /tmp/pip-build-env-jvwrdbk3 2023-06-26T18:04:29,920 Installing build dependencies: started 2023-06-26T18:04:29,922 Running command pip subprocess to install build dependencies 2023-06-26T18:04:32,672 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-06-26T18:04:33,452 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-26T18:04:37,479 Collecting setuptools>=42 2023-06-26T18:04:37,669 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-06-26T18:04:42,699 Installing collected packages: setuptools 2023-06-26T18:04:46,957 Successfully installed setuptools-68.0.0 2023-06-26T18:04:47,396 Installing build dependencies: finished with status 'done' 2023-06-26T18:04:47,407 Getting requirements to build wheel: started 2023-06-26T18:04:47,410 Running command Getting requirements to build wheel 2023-06-26T18:04:48,741 running egg_info 2023-06-26T18:04:48,751 writing AnnoMate.egg-info/PKG-INFO 2023-06-26T18:04:48,755 writing dependency_links to AnnoMate.egg-info/dependency_links.txt 2023-06-26T18:04:48,760 writing requirements to AnnoMate.egg-info/requires.txt 2023-06-26T18:04:48,763 writing top-level names to AnnoMate.egg-info/top_level.txt 2023-06-26T18:04:48,807 reading manifest file 'AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:04:48,812 adding license file 'LICENSE.txt' 2023-06-26T18:04:48,819 writing manifest file 'AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:04:48,823 /tmp/pip-build-env-jvwrdbk3/overlay/lib/python3.7/site-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-06-26T18:04:48,823 !! 2023-06-26T18:04:48,824 ******************************************************************************** 2023-06-26T18:04:48,825 Usage of dash-separated 'description-file' will not be supported in future 2023-06-26T18:04:48,825 versions. Please use the underscore name 'description_file' instead. 2023-06-26T18:04:48,826 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-06-26T18:04:48,827 or your builds will no longer be supported. 2023-06-26T18:04:48,827 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-06-26T18:04:48,828 ******************************************************************************** 2023-06-26T18:04:48,829 !! 2023-06-26T18:04:48,829 opt = self.warn_dash_deprecation(opt, section) 2023-06-26T18:04:48,935 Getting requirements to build wheel: finished with status 'done' 2023-06-26T18:04:48,959 Installing backend dependencies: started 2023-06-26T18:04:48,961 Running command pip subprocess to install backend dependencies 2023-06-26T18:04:51,713 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-06-26T18:04:52,485 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-26T18:04:53,364 Collecting wheel 2023-06-26T18:04:53,416 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-06-26T18:04:57,553 Installing collected packages: wheel 2023-06-26T18:04:58,006 Creating /tmp/pip-build-env-jvwrdbk3/normal/bin 2023-06-26T18:04:58,010 changing mode of /tmp/pip-build-env-jvwrdbk3/normal/bin/wheel to 755 2023-06-26T18:04:58,037 Successfully installed wheel-0.40.0 2023-06-26T18:04:58,416 Installing backend dependencies: finished with status 'done' 2023-06-26T18:04:58,422 Created temporary directory: /tmp/pip-modern-metadata-eg3w2fjb 2023-06-26T18:04:58,428 Preparing metadata (pyproject.toml): started 2023-06-26T18:04:58,431 Running command Preparing metadata (pyproject.toml) 2023-06-26T18:04:59,718 running dist_info 2023-06-26T18:04:59,759 creating /tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info 2023-06-26T18:04:59,768 writing /tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/PKG-INFO 2023-06-26T18:04:59,773 writing dependency_links to /tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/dependency_links.txt 2023-06-26T18:04:59,778 writing requirements to /tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/requires.txt 2023-06-26T18:04:59,780 writing top-level names to /tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/top_level.txt 2023-06-26T18:04:59,783 writing manifest file '/tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:04:59,832 reading manifest file '/tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:04:59,836 adding license file 'LICENSE.txt' 2023-06-26T18:04:59,843 writing manifest file '/tmp/pip-modern-metadata-eg3w2fjb/AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:04:59,845 creating '/tmp/pip-modern-metadata-eg3w2fjb/AnnoMate-0.0.0.dist-info' 2023-06-26T18:05:00,043 /tmp/pip-build-env-jvwrdbk3/overlay/lib/python3.7/site-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-06-26T18:05:00,043 !! 2023-06-26T18:05:00,044 ******************************************************************************** 2023-06-26T18:05:00,045 Usage of dash-separated 'description-file' will not be supported in future 2023-06-26T18:05:00,046 versions. Please use the underscore name 'description_file' instead. 2023-06-26T18:05:00,047 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-06-26T18:05:00,047 or your builds will no longer be supported. 2023-06-26T18:05:00,048 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-06-26T18:05:00,049 ******************************************************************************** 2023-06-26T18:05:00,050 !! 2023-06-26T18:05:00,050 opt = self.warn_dash_deprecation(opt, section) 2023-06-26T18:05:00,169 Preparing metadata (pyproject.toml): finished with status 'done' 2023-06-26T18:05:00,188 Source in /tmp/pip-wheel-otsy484q/annomate_e0bbaa15fc6f475fa1fd2929b1b985f6 has version 0.0.0, which satisfies requirement annomate==0.0.0 from https://files.pythonhosted.org/packages/f6/9c/e8f438b02f2ee63d29f645b6355e6bd6b247fa52ac9886fdeea558a8d7fb/AnnoMate-0.0.0.tar.gz 2023-06-26T18:05:00,190 Removed annomate==0.0.0 from https://files.pythonhosted.org/packages/f6/9c/e8f438b02f2ee63d29f645b6355e6bd6b247fa52ac9886fdeea558a8d7fb/AnnoMate-0.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-ylga0b3e' 2023-06-26T18:05:00,204 Created temporary directory: /tmp/pip-unpack-dspdd63t 2023-06-26T18:05:00,206 Building wheels for collected packages: annomate 2023-06-26T18:05:00,215 Created temporary directory: /tmp/pip-wheel-djvn7pqy 2023-06-26T18:05:00,215 Destination directory: /tmp/pip-wheel-djvn7pqy 2023-06-26T18:05:00,222 Building wheel for annomate (pyproject.toml): started 2023-06-26T18:05:00,225 Running command Building wheel for annomate (pyproject.toml) 2023-06-26T18:05:01,531 running bdist_wheel 2023-06-26T18:05:01,604 running build 2023-06-26T18:05:01,605 running build_py 2023-06-26T18:05:01,622 creating build 2023-06-26T18:05:01,623 creating build/lib 2023-06-26T18:05:01,624 creating build/lib/AnnoMate 2023-06-26T18:05:01,626 copying ./AnnoMate/ReviewDataInterface.py -> build/lib/AnnoMate 2023-06-26T18:05:01,631 copying ./AnnoMate/Data.py -> build/lib/AnnoMate 2023-06-26T18:05:01,635 copying ./AnnoMate/ReviewDataApp.py -> build/lib/AnnoMate 2023-06-26T18:05:01,642 copying ./AnnoMate/__init__.py -> build/lib/AnnoMate 2023-06-26T18:05:01,644 copying ./AnnoMate/ReviewerTemplate.py -> build/lib/AnnoMate 2023-06-26T18:05:01,649 copying ./AnnoMate/AnnotationDisplayComponent.py -> build/lib/AnnoMate 2023-06-26T18:05:01,655 creating build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,656 copying ./AnnoMate/AppComponents/MutationTableComponent.py -> build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,661 copying ./AnnoMate/AppComponents/DataTableComponents.py -> build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,664 copying ./AnnoMate/AppComponents/PhylogicComponents.py -> build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,669 copying ./AnnoMate/AppComponents/CNVPlotComponent.py -> build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,673 copying ./AnnoMate/AppComponents/utils.py -> build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,677 copying ./AnnoMate/AppComponents/__init__.py -> build/lib/AnnoMate/AppComponents 2023-06-26T18:05:01,681 creating build/lib/AnnoMate/Reviewers 2023-06-26T18:05:01,683 copying ./AnnoMate/Reviewers/ExampleReviewer.py -> build/lib/AnnoMate/Reviewers 2023-06-26T18:05:01,687 copying ./AnnoMate/Reviewers/__init__.py -> build/lib/AnnoMate/Reviewers 2023-06-26T18:05:01,691 creating build/lib/AnnoMate/DataTypes 2023-06-26T18:05:01,693 copying ./AnnoMate/DataTypes/GenericData.py -> build/lib/AnnoMate/DataTypes 2023-06-26T18:05:01,697 copying ./AnnoMate/DataTypes/PatientSampleData.py -> build/lib/AnnoMate/DataTypes 2023-06-26T18:05:01,700 copying ./AnnoMate/DataTypes/__init__.py -> build/lib/AnnoMate/DataTypes 2023-06-26T18:05:01,704 creating build/lib/AnnoMate/AnnotationDisplayComponents 2023-06-26T18:05:01,705 copying ./AnnoMate/AnnotationDisplayComponents/__init__.py -> build/lib/AnnoMate/AnnotationDisplayComponents 2023-06-26T18:05:01,746 installing to build/bdist.linux-armv7l/wheel 2023-06-26T18:05:01,746 running install 2023-06-26T18:05:01,807 running install_lib 2023-06-26T18:05:01,822 creating build/bdist.linux-armv7l 2023-06-26T18:05:01,823 creating build/bdist.linux-armv7l/wheel 2023-06-26T18:05:01,826 creating build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,830 creating build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,832 copying build/lib/AnnoMate/AppComponents/MutationTableComponent.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,837 copying build/lib/AnnoMate/AppComponents/DataTableComponents.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,841 copying build/lib/AnnoMate/AppComponents/PhylogicComponents.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,846 copying build/lib/AnnoMate/AppComponents/CNVPlotComponent.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,851 copying build/lib/AnnoMate/AppComponents/utils.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,855 copying build/lib/AnnoMate/AppComponents/__init__.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AppComponents 2023-06-26T18:05:01,859 creating build/bdist.linux-armv7l/wheel/AnnoMate/Reviewers 2023-06-26T18:05:01,861 copying build/lib/AnnoMate/Reviewers/ExampleReviewer.py -> build/bdist.linux-armv7l/wheel/AnnoMate/Reviewers 2023-06-26T18:05:01,865 copying build/lib/AnnoMate/Reviewers/__init__.py -> build/bdist.linux-armv7l/wheel/AnnoMate/Reviewers 2023-06-26T18:05:01,869 copying build/lib/AnnoMate/ReviewDataInterface.py -> build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,873 copying build/lib/AnnoMate/Data.py -> build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,878 creating build/bdist.linux-armv7l/wheel/AnnoMate/DataTypes 2023-06-26T18:05:01,880 copying build/lib/AnnoMate/DataTypes/GenericData.py -> build/bdist.linux-armv7l/wheel/AnnoMate/DataTypes 2023-06-26T18:05:01,884 copying build/lib/AnnoMate/DataTypes/PatientSampleData.py -> build/bdist.linux-armv7l/wheel/AnnoMate/DataTypes 2023-06-26T18:05:01,887 copying build/lib/AnnoMate/DataTypes/__init__.py -> build/bdist.linux-armv7l/wheel/AnnoMate/DataTypes 2023-06-26T18:05:01,890 copying build/lib/AnnoMate/ReviewDataApp.py -> build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,900 creating build/bdist.linux-armv7l/wheel/AnnoMate/AnnotationDisplayComponents 2023-06-26T18:05:01,902 copying build/lib/AnnoMate/AnnotationDisplayComponents/__init__.py -> build/bdist.linux-armv7l/wheel/AnnoMate/AnnotationDisplayComponents 2023-06-26T18:05:01,906 copying build/lib/AnnoMate/__init__.py -> build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,909 copying build/lib/AnnoMate/ReviewerTemplate.py -> build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,914 copying build/lib/AnnoMate/AnnotationDisplayComponent.py -> build/bdist.linux-armv7l/wheel/AnnoMate 2023-06-26T18:05:01,917 running install_egg_info 2023-06-26T18:05:01,970 running egg_info 2023-06-26T18:05:01,979 writing AnnoMate.egg-info/PKG-INFO 2023-06-26T18:05:01,983 writing dependency_links to AnnoMate.egg-info/dependency_links.txt 2023-06-26T18:05:01,986 writing requirements to AnnoMate.egg-info/requires.txt 2023-06-26T18:05:01,988 writing top-level names to AnnoMate.egg-info/top_level.txt 2023-06-26T18:05:02,010 reading manifest file 'AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:05:02,015 adding license file 'LICENSE.txt' 2023-06-26T18:05:02,022 writing manifest file 'AnnoMate.egg-info/SOURCES.txt' 2023-06-26T18:05:02,024 Copying AnnoMate.egg-info to build/bdist.linux-armv7l/wheel/AnnoMate-0.0.0-py3.7.egg-info 2023-06-26T18:05:02,043 running install_scripts 2023-06-26T18:05:02,087 creating build/bdist.linux-armv7l/wheel/AnnoMate-0.0.0.dist-info/WHEEL 2023-06-26T18:05:02,092 creating '/tmp/pip-wheel-djvn7pqy/.tmp-3say0j_z/AnnoMate-0.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-26T18:05:02,098 adding 'AnnoMate/AnnotationDisplayComponent.py' 2023-06-26T18:05:02,101 adding 'AnnoMate/Data.py' 2023-06-26T18:05:02,114 adding 'AnnoMate/ReviewDataApp.py' 2023-06-26T18:05:02,118 adding 'AnnoMate/ReviewDataInterface.py' 2023-06-26T18:05:02,124 adding 'AnnoMate/ReviewerTemplate.py' 2023-06-26T18:05:02,127 adding 'AnnoMate/__init__.py' 2023-06-26T18:05:02,130 adding 'AnnoMate/AnnotationDisplayComponents/__init__.py' 2023-06-26T18:05:02,144 adding 'AnnoMate/AppComponents/CNVPlotComponent.py' 2023-06-26T18:05:02,147 adding 'AnnoMate/AppComponents/DataTableComponents.py' 2023-06-26T18:05:02,154 adding 'AnnoMate/AppComponents/MutationTableComponent.py' 2023-06-26T18:05:02,162 adding 'AnnoMate/AppComponents/PhylogicComponents.py' 2023-06-26T18:05:02,165 adding 'AnnoMate/AppComponents/__init__.py' 2023-06-26T18:05:02,168 adding 'AnnoMate/AppComponents/utils.py' 2023-06-26T18:05:02,172 adding 'AnnoMate/DataTypes/GenericData.py' 2023-06-26T18:05:02,174 adding 'AnnoMate/DataTypes/PatientSampleData.py' 2023-06-26T18:05:02,176 adding 'AnnoMate/DataTypes/__init__.py' 2023-06-26T18:05:02,181 adding 'AnnoMate/Reviewers/ExampleReviewer.py' 2023-06-26T18:05:02,183 adding 'AnnoMate/Reviewers/__init__.py' 2023-06-26T18:05:02,187 adding 'AnnoMate-0.0.0.dist-info/LICENSE.txt' 2023-06-26T18:05:02,191 adding 'AnnoMate-0.0.0.dist-info/METADATA' 2023-06-26T18:05:02,193 adding 'AnnoMate-0.0.0.dist-info/WHEEL' 2023-06-26T18:05:02,195 adding 'AnnoMate-0.0.0.dist-info/top_level.txt' 2023-06-26T18:05:02,197 adding 'AnnoMate-0.0.0.dist-info/RECORD' 2023-06-26T18:05:02,201 removing build/bdist.linux-armv7l/wheel 2023-06-26T18:05:02,221 /tmp/pip-build-env-jvwrdbk3/overlay/lib/python3.7/site-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-06-26T18:05:02,221 !! 2023-06-26T18:05:02,222 ******************************************************************************** 2023-06-26T18:05:02,223 Usage of dash-separated 'description-file' will not be supported in future 2023-06-26T18:05:02,223 versions. Please use the underscore name 'description_file' instead. 2023-06-26T18:05:02,224 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-06-26T18:05:02,225 or your builds will no longer be supported. 2023-06-26T18:05:02,226 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-06-26T18:05:02,226 ******************************************************************************** 2023-06-26T18:05:02,227 !! 2023-06-26T18:05:02,227 opt = self.warn_dash_deprecation(opt, section) 2023-06-26T18:05:02,352 Building wheel for annomate (pyproject.toml): finished with status 'done' 2023-06-26T18:05:02,367 Created wheel for annomate: filename=AnnoMate-0.0.0-py3-none-any.whl size=46294 sha256=57d0d0d857db623e6af6296676ae887f3c31f307bf15dc0edf7176ba61debf6f 2023-06-26T18:05:02,369 Stored in directory: /tmp/pip-ephem-wheel-cache-qbm_by3v/wheels/b7/ba/00/9a7e20f72f32199c515a7e6004b3beff37edc8081ac653b09e 2023-06-26T18:05:02,398 Successfully built annomate 2023-06-26T18:05:02,408 Removed build tracker: '/tmp/pip-build-tracker-ylga0b3e'