2023-06-29T02:59:23,778 Created temporary directory: /tmp/pip-build-tracker-vyskgpif 2023-06-29T02:59:23,779 Initialized build tracking at /tmp/pip-build-tracker-vyskgpif 2023-06-29T02:59:23,779 Created build tracker: /tmp/pip-build-tracker-vyskgpif 2023-06-29T02:59:23,779 Entered build tracker: /tmp/pip-build-tracker-vyskgpif 2023-06-29T02:59:23,780 Created temporary directory: /tmp/pip-wheel-0olz5csi 2023-06-29T02:59:23,783 Created temporary directory: /tmp/pip-ephem-wheel-cache-sih1q850 2023-06-29T02:59:23,806 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-06-29T02:59:23,809 2 location(s) to search for versions of funid: 2023-06-29T02:59:23,809 * https://pypi.org/simple/funid/ 2023-06-29T02:59:23,809 * https://www.piwheels.org/simple/funid/ 2023-06-29T02:59:23,810 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2023-06-29T02:59:23,810 Getting page https://pypi.org/simple/funid/ 2023-06-29T02:59:23,812 Found index url https://pypi.org/simple/ 2023-06-29T02:59:23,878 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2023-06-29T02:59:23,885 Found link https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.0 2023-06-29T02:59:23,885 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,886 Found link https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.2 2023-06-29T02:59:23,886 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:23,887 Found link https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.2.1 2023-06-29T02:59:23,887 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:23,888 Found link https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.0 2023-06-29T02:59:23,888 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:23,889 Found link https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.3.1 2023-06-29T02:59:23,889 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:23,890 Found link https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.4 2023-06-29T02:59:23,890 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:23,891 Found link https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8), version: 0.3.5 2023-06-29T02:59:23,891 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/b7/27/c64985b174cbfa662e2109d838292a69d1669ad6a3a36294ee03ce81ef2a/FunID-0.3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,891 Found link https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.6.1 2023-06-29T02:59:23,892 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/1f/44/739693947517bbc2e128df01ee142d72ee3358f7cc7daba4a3759fbf34bd/FunID-0.3.7-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,892 Found link https://files.pythonhosted.org/packages/a2/14/7ae571dd6e4b918e2a85ca1625481c5764c15f2f4ecebb64e738e4863c57/FunID-0.3.7.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.7 2023-06-29T02:59:23,893 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/89/e3/e48669d0fdeafd9b79bcd3b601ed05547df828c6f5a3cd0d733e28289738/FunID-0.3.8-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,893 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f4/45/d1bc4761848b0f4ece4dc47311a91a7e85668eb49b3bbc86843e4508dbc1/FunID-0.3.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,893 Found link https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.1 2023-06-29T02:59:23,894 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f9/05/5a5739948741051441923681ab8f41aeb24b4b67aee087e3911831cd397a/FunID-0.3.8.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,894 Found link https://files.pythonhosted.org/packages/4a/4a/3bf498c2707726c16177fb6d5e4c1fb6b942aa0f857378f22345cee709b9/FunID-0.3.8.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.8.2 2023-06-29T02:59:23,895 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/51/ac/f8561c5c3715309d959188f62cef662154c247362fa548893dda38582f08/FunID-0.3.9-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,895 Found link https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.9 2023-06-29T02:59:23,895 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/26/59/dd98aa71ec91f80ff255b9177e7c3705f2352298dc8bb48bfa492d8304e3/FunID-0.3.10.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,896 Found link https://files.pythonhosted.org/packages/da/ef/a3b426feaf718c30c259c165124120c3192833b4c356a8a10efa909ac4b7/FunID-0.3.10.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.10.1 2023-06-29T02:59:23,896 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/17/b5/c3439f3af84951ffe85ed70190fdc02a33ab0e435a934a02c08f49505642/FunID-0.3.11-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,897 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/82/95/47d34ff9a0cc4a13e411dda8b40535efd54149fd259ef126246e6fd7ecdb/FunID-0.3.11.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,897 Found link https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.11.0 2023-06-29T02:59:23,897 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/43/8c/a5bf3a512cb66117b0b8a83837a966dc2e3ce2c2bcb8570e5a35d3400392/FunID-0.3.11.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:23,898 Found link https://files.pythonhosted.org/packages/ba/8a/83e56e593445f58c6b6137886a90beaedabcc59274a95ff56e9d1fd8ecdb/FunID-0.3.11.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8), version: 0.3.11.1 2023-06-29T02:59:23,898 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2023-06-29T02:59:23,899 Getting page https://www.piwheels.org/simple/funid/ 2023-06-29T02:59:23,900 Found index url https://www.piwheels.org/simple/ 2023-06-29T02:59:24,072 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2023-06-29T02:59:24,077 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.11.0-py3-none-any.whl#sha256=6e60d72632ca2cf07c0ec2c903a5e044eef646e76848189b805d20736850ce33 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,077 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.10.1-py3-none-any.whl#sha256=7ac9e1373fc681d838576b55f51c104675d6fc3134a2d545da50145e18d08705 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,078 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.9-py3-none-any.whl#sha256=4431b10bd1c85b826c3ec29a0d6012ea6c189c62b3b9a78ca40cb341e5aba58a (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,078 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.8.2-py3-none-any.whl#sha256=06eb041030a5d98c5317f93863fa0bafdb3bac2e3225487b61109016d3ae8b89 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,078 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.8.1-py3-none-any.whl#sha256=e084fdf424ae421530d153e56c4a7a15849d59762617b101ba672265e1f83ae2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,078 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.7-py3-none-any.whl#sha256=696cfcf7f361ec4e0dd269ac3c0b30051c83fb75dd92ee7b8b0813f1b6c71f6c (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,078 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.6.1-py3-none-any.whl#sha256=9eddeab3cb03eb693bd4e1e231ab1076caa820fd6db88ef6c584b309cf87af4b (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,079 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.5-py3-none-any.whl#sha256=010daca223b2f36ea9811ebd48eb1afa57c9a0ac2f3a3f84f9b86603107db381 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:24,079 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.4-py3-none-any.whl#sha256=8f1161bfcbdbb5037a33076aa43c07292865101ee07e5370547b462c0e20cb67 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:24,079 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.1-py3-none-any.whl#sha256=3f87f5ecaa7ed8c6c00a3d76dc520e16293e70f38d878a85136fe28b96dcbbc5 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:24,079 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.3.0-py3-none-any.whl#sha256=dbca8d35c471b5a3c78fa7f5310bc475466d4bdc67ffff084e63baaf20a81154 (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:24,079 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2.1-py3-none-any.whl#sha256=273f7078ce3ee94e0c5f6e862a8419c6ea6bd05ea1153174fba3ac5259d65f3a (from https://www.piwheels.org/simple/funid/) (requires-python:<=3.11, >3.8) 2023-06-29T02:59:24,080 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.2-py3-none-any.whl#sha256=d0714cd7cd6b2c16ae6dc7120ae5ede922e049fab52e6d1a2a24c6e7075360be (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,080 Skipping link: No binaries permitted for funid: https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2023-06-29T02:59:24,080 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2023-06-29T02:59:24,080 Skipping link: not a file: https://pypi.org/simple/funid/ 2023-06-29T02:59:24,100 Given no hashes to check 1 links for project 'funid': discarding no candidates 2023-06-29T02:59:24,116 Collecting funid==0.3.11.1 2023-06-29T02:59:24,119 Created temporary directory: /tmp/pip-unpack-8e_9o8ao 2023-06-29T02:59:24,272 Downloading FunID-0.3.11.1.tar.gz (51.4 MB) 2023-06-29T02:59:39,056 Added funid==0.3.11.1 from https://files.pythonhosted.org/packages/ba/8a/83e56e593445f58c6b6137886a90beaedabcc59274a95ff56e9d1fd8ecdb/FunID-0.3.11.1.tar.gz to build tracker '/tmp/pip-build-tracker-vyskgpif' 2023-06-29T02:59:39,058 Running setup.py (path:/tmp/pip-wheel-0olz5csi/funid_a81b5352519145499b5390e2b99d7f71/setup.py) egg_info for package funid 2023-06-29T02:59:39,059 Created temporary directory: /tmp/pip-pip-egg-info-vfnp_6w3 2023-06-29T02:59:39,059 Preparing metadata (setup.py): started 2023-06-29T02:59:39,060 Running command python setup.py egg_info 2023-06-29T02:59:39,691 {'name': 'FunID', 'version': '0.3.11.1', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'psutil', 'PyQt5', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'scipy', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-06-29T02:59:39,692 running egg_info 2023-06-29T02:59:39,693 creating /tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info 2023-06-29T02:59:39,721 writing /tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/PKG-INFO 2023-06-29T02:59:39,724 writing dependency_links to /tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/dependency_links.txt 2023-06-29T02:59:39,726 writing entry points to /tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/entry_points.txt 2023-06-29T02:59:39,728 writing requirements to /tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/requires.txt 2023-06-29T02:59:39,729 writing top-level names to /tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/top_level.txt 2023-06-29T02:59:39,730 writing manifest file '/tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/SOURCES.txt' 2023-06-29T02:59:39,825 reading manifest file '/tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/SOURCES.txt' 2023-06-29T02:59:39,827 adding license file 'LICENSE' 2023-06-29T02:59:39,830 writing manifest file '/tmp/pip-pip-egg-info-vfnp_6w3/FunID.egg-info/SOURCES.txt' 2023-06-29T02:59:39,889 Preparing metadata (setup.py): finished with status 'done' 2023-06-29T02:59:39,895 Source in /tmp/pip-wheel-0olz5csi/funid_a81b5352519145499b5390e2b99d7f71 has version 0.3.11.1, which satisfies requirement funid==0.3.11.1 from https://files.pythonhosted.org/packages/ba/8a/83e56e593445f58c6b6137886a90beaedabcc59274a95ff56e9d1fd8ecdb/FunID-0.3.11.1.tar.gz 2023-06-29T02:59:39,896 Removed funid==0.3.11.1 from https://files.pythonhosted.org/packages/ba/8a/83e56e593445f58c6b6137886a90beaedabcc59274a95ff56e9d1fd8ecdb/FunID-0.3.11.1.tar.gz from build tracker '/tmp/pip-build-tracker-vyskgpif' 2023-06-29T02:59:39,902 Created temporary directory: /tmp/pip-unpack-rhbbvx7l 2023-06-29T02:59:39,903 Building wheels for collected packages: funid 2023-06-29T02:59:39,907 Created temporary directory: /tmp/pip-wheel-ge7q8w40 2023-06-29T02:59:39,907 Building wheel for funid (setup.py): started 2023-06-29T02:59:39,908 Destination directory: /tmp/pip-wheel-ge7q8w40 2023-06-29T02:59:39,908 Running command python setup.py bdist_wheel 2023-06-29T02:59:40,334 {'name': 'FunID', 'version': '0.3.11.1', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.11, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.2', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib==3.5.1', 'numpy==1.22.3', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'psutil', 'PyQt5', 'pyyaml', 'sip>=4.19.4', 'scikit-learn==1.0.2', 'scipy', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2023-06-29T02:59:40,562 running bdist_wheel 2023-06-29T02:59:40,852 running build 2023-06-29T02:59:40,853 running build_py 2023-06-29T02:59:40,882 creating build 2023-06-29T02:59:40,883 creating build/lib 2023-06-29T02:59:40,883 creating build/lib/funid 2023-06-29T02:59:40,884 copying funid/main.py -> build/lib/funid 2023-06-29T02:59:40,887 copying funid/FunID_GUI.py -> build/lib/funid 2023-06-29T02:59:40,889 copying funid/__init__.py -> build/lib/funid 2023-06-29T02:59:40,892 creating build/lib/funid/src 2023-06-29T02:59:40,893 copying funid/src/reporter.py -> build/lib/funid/src 2023-06-29T02:59:40,896 copying funid/src/command.py -> build/lib/funid/src 2023-06-29T02:59:40,898 copying funid/src/align.py -> build/lib/funid/src 2023-06-29T02:59:40,900 copying funid/src/tool.py -> build/lib/funid/src 2023-06-29T02:59:40,902 copying funid/src/modeltest.py -> build/lib/funid/src 2023-06-29T02:59:40,904 copying funid/src/initialize.py -> build/lib/funid/src 2023-06-29T02:59:40,907 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2023-06-29T02:59:40,909 copying funid/src/save.py -> build/lib/funid/src 2023-06-29T02:59:40,912 copying funid/src/opt_generator.py -> build/lib/funid/src 2023-06-29T02:59:40,913 copying funid/src/manage_input.py -> build/lib/funid/src 2023-06-29T02:59:40,916 copying funid/src/patch.py -> build/lib/funid/src 2023-06-29T02:59:40,918 copying funid/src/ext.py -> build/lib/funid/src 2023-06-29T02:59:40,920 copying funid/src/logics.py -> build/lib/funid/src 2023-06-29T02:59:40,922 copying funid/src/hasher.py -> build/lib/funid/src 2023-06-29T02:59:40,924 copying funid/src/validate_option.py -> build/lib/funid/src 2023-06-29T02:59:40,927 copying funid/src/validation.py -> build/lib/funid/src 2023-06-29T02:59:40,929 copying funid/src/cluster.py -> build/lib/funid/src 2023-06-29T02:59:40,931 copying funid/src/concatenate.py -> build/lib/funid/src 2023-06-29T02:59:40,933 copying funid/src/tree.py -> build/lib/funid/src 2023-06-29T02:59:40,935 copying funid/src/logger.py -> build/lib/funid/src 2023-06-29T02:59:40,937 copying funid/src/__init__.py -> build/lib/funid/src 2023-06-29T02:59:40,938 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2023-06-29T02:59:40,941 copying funid/src/search.py -> build/lib/funid/src 2023-06-29T02:59:40,943 copying funid/src/trim.py -> build/lib/funid/src 2023-06-29T02:59:40,945 copying funid/src/ncbi.py -> build/lib/funid/src 2023-06-29T02:59:40,947 copying funid/src/dataset.py -> build/lib/funid/src 2023-06-29T02:59:40,950 creating build/lib/funid/data 2023-06-29T02:59:40,950 copying funid/data/__init__.py -> build/lib/funid/data 2023-06-29T02:59:40,952 running egg_info 2023-06-29T02:59:41,013 writing FunID.egg-info/PKG-INFO 2023-06-29T02:59:41,015 writing dependency_links to FunID.egg-info/dependency_links.txt 2023-06-29T02:59:41,017 writing entry points to FunID.egg-info/entry_points.txt 2023-06-29T02:59:41,018 writing requirements to FunID.egg-info/requires.txt 2023-06-29T02:59:41,019 writing top-level names to FunID.egg-info/top_level.txt 2023-06-29T02:59:41,055 reading manifest file 'FunID.egg-info/SOURCES.txt' 2023-06-29T02:59:41,063 adding license file 'LICENSE' 2023-06-29T02:59:41,071 writing manifest file 'FunID.egg-info/SOURCES.txt' 2023-06-29T02:59:41,074 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external' is absent from the `packages` configuration. 2023-06-29T02:59:41,074 !! 2023-06-29T02:59:41,075 ******************************************************************************** 2023-06-29T02:59:41,075 ############################ 2023-06-29T02:59:41,075 # Package would be ignored # 2023-06-29T02:59:41,075 ############################ 2023-06-29T02:59:41,075 Python recognizes 'funid.external' as an importable package[^1], 2023-06-29T02:59:41,075 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,075 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,076 package, please make sure that 'funid.external' is explicitly added 2023-06-29T02:59:41,076 to the `packages` configuration field. 2023-06-29T02:59:41,076 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,076 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,076 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,076 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,077 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,077 If you don't want 'funid.external' to be distributed and are 2023-06-29T02:59:41,077 already explicitly excluding 'funid.external' via 2023-06-29T02:59:41,077 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,077 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,077 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,078 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,078 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,078 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,078 even if it does not contain any `.py` files. 2023-06-29T02:59:41,078 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,078 directory, all directories are treated like packages. 2023-06-29T02:59:41,079 ******************************************************************************** 2023-06-29T02:59:41,079 !! 2023-06-29T02:59:41,079 check.warn(importable) 2023-06-29T02:59:41,079 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows' is absent from the `packages` configuration. 2023-06-29T02:59:41,079 !! 2023-06-29T02:59:41,080 ******************************************************************************** 2023-06-29T02:59:41,080 ############################ 2023-06-29T02:59:41,080 # Package would be ignored # 2023-06-29T02:59:41,080 ############################ 2023-06-29T02:59:41,080 Python recognizes 'funid.external.BLAST_Windows' as an importable package[^1], 2023-06-29T02:59:41,080 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,080 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,081 package, please make sure that 'funid.external.BLAST_Windows' is explicitly added 2023-06-29T02:59:41,081 to the `packages` configuration field. 2023-06-29T02:59:41,081 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,081 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,081 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,081 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,082 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,082 If you don't want 'funid.external.BLAST_Windows' to be distributed and are 2023-06-29T02:59:41,082 already explicitly excluding 'funid.external.BLAST_Windows' via 2023-06-29T02:59:41,082 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,082 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,082 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,082 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,083 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,083 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,083 even if it does not contain any `.py` files. 2023-06-29T02:59:41,083 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,083 directory, all directories are treated like packages. 2023-06-29T02:59:41,083 ******************************************************************************** 2023-06-29T02:59:41,084 !! 2023-06-29T02:59:41,084 check.warn(importable) 2023-06-29T02:59:41,084 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.bin' is absent from the `packages` configuration. 2023-06-29T02:59:41,084 !! 2023-06-29T02:59:41,084 ******************************************************************************** 2023-06-29T02:59:41,084 ############################ 2023-06-29T02:59:41,085 # Package would be ignored # 2023-06-29T02:59:41,085 ############################ 2023-06-29T02:59:41,085 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package[^1], 2023-06-29T02:59:41,085 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,085 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,085 package, please make sure that 'funid.external.BLAST_Windows.bin' is explicitly added 2023-06-29T02:59:41,085 to the `packages` configuration field. 2023-06-29T02:59:41,086 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,086 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,086 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,086 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,086 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,087 If you don't want 'funid.external.BLAST_Windows.bin' to be distributed and are 2023-06-29T02:59:41,087 already explicitly excluding 'funid.external.BLAST_Windows.bin' via 2023-06-29T02:59:41,087 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,087 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,087 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,087 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,087 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,088 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,088 even if it does not contain any `.py` files. 2023-06-29T02:59:41,088 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,088 directory, all directories are treated like packages. 2023-06-29T02:59:41,088 ******************************************************************************** 2023-06-29T02:59:41,088 !! 2023-06-29T02:59:41,089 check.warn(importable) 2023-06-29T02:59:41,089 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.BLAST_Windows.doc' is absent from the `packages` configuration. 2023-06-29T02:59:41,089 !! 2023-06-29T02:59:41,089 ******************************************************************************** 2023-06-29T02:59:41,089 ############################ 2023-06-29T02:59:41,089 # Package would be ignored # 2023-06-29T02:59:41,089 ############################ 2023-06-29T02:59:41,090 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package[^1], 2023-06-29T02:59:41,090 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,090 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,090 package, please make sure that 'funid.external.BLAST_Windows.doc' is explicitly added 2023-06-29T02:59:41,090 to the `packages` configuration field. 2023-06-29T02:59:41,090 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,090 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,091 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,091 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,091 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,091 If you don't want 'funid.external.BLAST_Windows.doc' to be distributed and are 2023-06-29T02:59:41,091 already explicitly excluding 'funid.external.BLAST_Windows.doc' via 2023-06-29T02:59:41,091 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,092 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,092 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,092 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,092 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,092 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,093 even if it does not contain any `.py` files. 2023-06-29T02:59:41,093 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,093 directory, all directories are treated like packages. 2023-06-29T02:59:41,093 ******************************************************************************** 2023-06-29T02:59:41,093 !! 2023-06-29T02:59:41,093 check.warn(importable) 2023-06-29T02:59:41,093 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.FastTree_Windows' is absent from the `packages` configuration. 2023-06-29T02:59:41,093 !! 2023-06-29T02:59:41,094 ******************************************************************************** 2023-06-29T02:59:41,094 ############################ 2023-06-29T02:59:41,094 # Package would be ignored # 2023-06-29T02:59:41,094 ############################ 2023-06-29T02:59:41,094 Python recognizes 'funid.external.FastTree_Windows' as an importable package[^1], 2023-06-29T02:59:41,094 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,095 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,095 package, please make sure that 'funid.external.FastTree_Windows' is explicitly added 2023-06-29T02:59:41,095 to the `packages` configuration field. 2023-06-29T02:59:41,095 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,095 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,095 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,095 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,096 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,096 If you don't want 'funid.external.FastTree_Windows' to be distributed and are 2023-06-29T02:59:41,096 already explicitly excluding 'funid.external.FastTree_Windows' via 2023-06-29T02:59:41,096 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,096 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,096 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,097 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,097 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,097 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,097 even if it does not contain any `.py` files. 2023-06-29T02:59:41,097 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,098 directory, all directories are treated like packages. 2023-06-29T02:59:41,098 ******************************************************************************** 2023-06-29T02:59:41,098 !! 2023-06-29T02:59:41,098 check.warn(importable) 2023-06-29T02:59:41,098 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.RAxML_Windows' is absent from the `packages` configuration. 2023-06-29T02:59:41,098 !! 2023-06-29T02:59:41,099 ******************************************************************************** 2023-06-29T02:59:41,099 ############################ 2023-06-29T02:59:41,099 # Package would be ignored # 2023-06-29T02:59:41,099 ############################ 2023-06-29T02:59:41,099 Python recognizes 'funid.external.RAxML_Windows' as an importable package[^1], 2023-06-29T02:59:41,099 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,100 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,100 package, please make sure that 'funid.external.RAxML_Windows' is explicitly added 2023-06-29T02:59:41,100 to the `packages` configuration field. 2023-06-29T02:59:41,100 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,100 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,100 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,101 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,101 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,101 If you don't want 'funid.external.RAxML_Windows' to be distributed and are 2023-06-29T02:59:41,101 already explicitly excluding 'funid.external.RAxML_Windows' via 2023-06-29T02:59:41,101 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,102 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,102 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,102 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,102 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,103 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,103 even if it does not contain any `.py` files. 2023-06-29T02:59:41,103 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,103 directory, all directories are treated like packages. 2023-06-29T02:59:41,103 ******************************************************************************** 2023-06-29T02:59:41,103 !! 2023-06-29T02:59:41,103 check.warn(importable) 2023-06-29T02:59:41,104 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows' is absent from the `packages` configuration. 2023-06-29T02:59:41,104 !! 2023-06-29T02:59:41,104 ******************************************************************************** 2023-06-29T02:59:41,104 ############################ 2023-06-29T02:59:41,104 # Package would be ignored # 2023-06-29T02:59:41,105 ############################ 2023-06-29T02:59:41,105 Python recognizes 'funid.external.mmseqs_Windows' as an importable package[^1], 2023-06-29T02:59:41,105 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,105 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,105 package, please make sure that 'funid.external.mmseqs_Windows' is explicitly added 2023-06-29T02:59:41,105 to the `packages` configuration field. 2023-06-29T02:59:41,106 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,106 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,106 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,106 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,107 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,107 If you don't want 'funid.external.mmseqs_Windows' to be distributed and are 2023-06-29T02:59:41,107 already explicitly excluding 'funid.external.mmseqs_Windows' via 2023-06-29T02:59:41,107 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,107 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,107 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,108 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,108 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,108 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,108 even if it does not contain any `.py` files. 2023-06-29T02:59:41,108 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,108 directory, all directories are treated like packages. 2023-06-29T02:59:41,109 ******************************************************************************** 2023-06-29T02:59:41,109 !! 2023-06-29T02:59:41,109 check.warn(importable) 2023-06-29T02:59:41,109 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.bin' is absent from the `packages` configuration. 2023-06-29T02:59:41,109 !! 2023-06-29T02:59:41,109 ******************************************************************************** 2023-06-29T02:59:41,110 ############################ 2023-06-29T02:59:41,110 # Package would be ignored # 2023-06-29T02:59:41,110 ############################ 2023-06-29T02:59:41,110 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package[^1], 2023-06-29T02:59:41,110 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,110 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,110 package, please make sure that 'funid.external.mmseqs_Windows.bin' is explicitly added 2023-06-29T02:59:41,110 to the `packages` configuration field. 2023-06-29T02:59:41,111 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,111 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,111 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,111 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,111 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,112 If you don't want 'funid.external.mmseqs_Windows.bin' to be distributed and are 2023-06-29T02:59:41,112 already explicitly excluding 'funid.external.mmseqs_Windows.bin' via 2023-06-29T02:59:41,112 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,112 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,112 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,112 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,113 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,113 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,113 even if it does not contain any `.py` files. 2023-06-29T02:59:41,113 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,113 directory, all directories are treated like packages. 2023-06-29T02:59:41,113 ******************************************************************************** 2023-06-29T02:59:41,114 !! 2023-06-29T02:59:41,114 check.warn(importable) 2023-06-29T02:59:41,114 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.examples' is absent from the `packages` configuration. 2023-06-29T02:59:41,114 !! 2023-06-29T02:59:41,114 ******************************************************************************** 2023-06-29T02:59:41,114 ############################ 2023-06-29T02:59:41,114 # Package would be ignored # 2023-06-29T02:59:41,115 ############################ 2023-06-29T02:59:41,115 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package[^1], 2023-06-29T02:59:41,115 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,115 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,115 package, please make sure that 'funid.external.mmseqs_Windows.examples' is explicitly added 2023-06-29T02:59:41,115 to the `packages` configuration field. 2023-06-29T02:59:41,116 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,116 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,116 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,116 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,116 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,116 If you don't want 'funid.external.mmseqs_Windows.examples' to be distributed and are 2023-06-29T02:59:41,117 already explicitly excluding 'funid.external.mmseqs_Windows.examples' via 2023-06-29T02:59:41,117 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,117 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,117 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,117 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,118 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,118 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,118 even if it does not contain any `.py` files. 2023-06-29T02:59:41,118 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,118 directory, all directories are treated like packages. 2023-06-29T02:59:41,118 ******************************************************************************** 2023-06-29T02:59:41,119 !! 2023-06-29T02:59:41,119 check.warn(importable) 2023-06-29T02:59:41,119 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.matrices' is absent from the `packages` configuration. 2023-06-29T02:59:41,119 !! 2023-06-29T02:59:41,119 ******************************************************************************** 2023-06-29T02:59:41,119 ############################ 2023-06-29T02:59:41,119 # Package would be ignored # 2023-06-29T02:59:41,119 ############################ 2023-06-29T02:59:41,120 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package[^1], 2023-06-29T02:59:41,120 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,120 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,120 package, please make sure that 'funid.external.mmseqs_Windows.matrices' is explicitly added 2023-06-29T02:59:41,120 to the `packages` configuration field. 2023-06-29T02:59:41,120 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,121 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,121 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,121 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,121 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,121 If you don't want 'funid.external.mmseqs_Windows.matrices' to be distributed and are 2023-06-29T02:59:41,121 already explicitly excluding 'funid.external.mmseqs_Windows.matrices' via 2023-06-29T02:59:41,122 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,122 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,122 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,122 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,123 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,123 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,123 even if it does not contain any `.py` files. 2023-06-29T02:59:41,123 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,124 directory, all directories are treated like packages. 2023-06-29T02:59:41,124 ******************************************************************************** 2023-06-29T02:59:41,124 !! 2023-06-29T02:59:41,124 check.warn(importable) 2023-06-29T02:59:41,124 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.external.mmseqs_Windows.util' is absent from the `packages` configuration. 2023-06-29T02:59:41,124 !! 2023-06-29T02:59:41,125 ******************************************************************************** 2023-06-29T02:59:41,125 ############################ 2023-06-29T02:59:41,125 # Package would be ignored # 2023-06-29T02:59:41,125 ############################ 2023-06-29T02:59:41,125 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package[^1], 2023-06-29T02:59:41,125 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,125 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,126 package, please make sure that 'funid.external.mmseqs_Windows.util' is explicitly added 2023-06-29T02:59:41,126 to the `packages` configuration field. 2023-06-29T02:59:41,126 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,126 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,126 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,126 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,127 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,127 If you don't want 'funid.external.mmseqs_Windows.util' to be distributed and are 2023-06-29T02:59:41,127 already explicitly excluding 'funid.external.mmseqs_Windows.util' via 2023-06-29T02:59:41,127 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,127 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,127 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,128 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,128 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,128 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,128 even if it does not contain any `.py` files. 2023-06-29T02:59:41,128 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,129 directory, all directories are treated like packages. 2023-06-29T02:59:41,129 ******************************************************************************** 2023-06-29T02:59:41,129 !! 2023-06-29T02:59:41,129 check.warn(importable) 2023-06-29T02:59:41,129 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium' is absent from the `packages` configuration. 2023-06-29T02:59:41,129 !! 2023-06-29T02:59:41,129 ******************************************************************************** 2023-06-29T02:59:41,130 ############################ 2023-06-29T02:59:41,130 # Package would be ignored # 2023-06-29T02:59:41,130 ############################ 2023-06-29T02:59:41,130 Python recognizes 'funid.test_dataset.penicillium' as an importable package[^1], 2023-06-29T02:59:41,130 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,130 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,130 package, please make sure that 'funid.test_dataset.penicillium' is explicitly added 2023-06-29T02:59:41,131 to the `packages` configuration field. 2023-06-29T02:59:41,131 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,131 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,131 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,131 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,131 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,132 If you don't want 'funid.test_dataset.penicillium' to be distributed and are 2023-06-29T02:59:41,132 already explicitly excluding 'funid.test_dataset.penicillium' via 2023-06-29T02:59:41,132 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,132 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,132 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,132 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,133 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,133 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,133 even if it does not contain any `.py` files. 2023-06-29T02:59:41,133 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,133 directory, all directories are treated like packages. 2023-06-29T02:59:41,133 ******************************************************************************** 2023-06-29T02:59:41,134 !! 2023-06-29T02:59:41,134 check.warn(importable) 2023-06-29T02:59:41,134 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.DB' is absent from the `packages` configuration. 2023-06-29T02:59:41,134 !! 2023-06-29T02:59:41,134 ******************************************************************************** 2023-06-29T02:59:41,134 ############################ 2023-06-29T02:59:41,135 # Package would be ignored # 2023-06-29T02:59:41,135 ############################ 2023-06-29T02:59:41,135 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package[^1], 2023-06-29T02:59:41,135 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,135 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,135 package, please make sure that 'funid.test_dataset.penicillium.DB' is explicitly added 2023-06-29T02:59:41,135 to the `packages` configuration field. 2023-06-29T02:59:41,136 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,136 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,136 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,136 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,136 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,137 If you don't want 'funid.test_dataset.penicillium.DB' to be distributed and are 2023-06-29T02:59:41,137 already explicitly excluding 'funid.test_dataset.penicillium.DB' via 2023-06-29T02:59:41,137 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,137 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,137 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,137 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,138 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,138 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,138 even if it does not contain any `.py` files. 2023-06-29T02:59:41,138 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,138 directory, all directories are treated like packages. 2023-06-29T02:59:41,138 ******************************************************************************** 2023-06-29T02:59:41,139 !! 2023-06-29T02:59:41,139 check.warn(importable) 2023-06-29T02:59:41,139 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'funid.test_dataset.penicillium.Query' is absent from the `packages` configuration. 2023-06-29T02:59:41,139 !! 2023-06-29T02:59:41,139 ******************************************************************************** 2023-06-29T02:59:41,139 ############################ 2023-06-29T02:59:41,139 # Package would be ignored # 2023-06-29T02:59:41,140 ############################ 2023-06-29T02:59:41,140 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package[^1], 2023-06-29T02:59:41,140 but it is absent from setuptools' `packages` configuration. 2023-06-29T02:59:41,140 This leads to an ambiguous overall configuration. If you want to distribute this 2023-06-29T02:59:41,140 package, please make sure that 'funid.test_dataset.penicillium.Query' is explicitly added 2023-06-29T02:59:41,140 to the `packages` configuration field. 2023-06-29T02:59:41,140 Alternatively, you can also rely on setuptools' discovery methods 2023-06-29T02:59:41,141 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-06-29T02:59:41,141 instead of `find_packages(...)`/`find:`). 2023-06-29T02:59:41,141 You can read more about "package discovery" on setuptools documentation page: 2023-06-29T02:59:41,141 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-06-29T02:59:41,141 If you don't want 'funid.test_dataset.penicillium.Query' to be distributed and are 2023-06-29T02:59:41,142 already explicitly excluding 'funid.test_dataset.penicillium.Query' via 2023-06-29T02:59:41,142 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-06-29T02:59:41,142 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-06-29T02:59:41,142 combination with a more fine grained `package-data` configuration. 2023-06-29T02:59:41,142 You can read more about "package data files" on setuptools documentation page: 2023-06-29T02:59:41,142 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-06-29T02:59:41,143 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-06-29T02:59:41,143 even if it does not contain any `.py` files. 2023-06-29T02:59:41,143 On the other hand, currently there is no concept of package data 2023-06-29T02:59:41,143 directory, all directories are treated like packages. 2023-06-29T02:59:41,143 ******************************************************************************** 2023-06-29T02:59:41,143 !! 2023-06-29T02:59:41,143 check.warn(importable) 2023-06-29T02:59:41,144 creating build/lib/funid/external 2023-06-29T02:59:41,144 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2023-06-29T02:59:41,144 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2023-06-29T02:59:41,523 copying funid/external/__init__.py -> build/lib/funid/external 2023-06-29T02:59:41,525 creating build/lib/funid/external/BLAST_Windows 2023-06-29T02:59:41,526 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2023-06-29T02:59:41,530 creating build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,531 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,774 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,777 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,779 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,783 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,962 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,966 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2023-06-29T02:59:41,969 creating build/lib/funid/external/BLAST_Windows/doc 2023-06-29T02:59:41,970 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2023-06-29T02:59:41,973 creating build/lib/funid/external/FastTree_Windows 2023-06-29T02:59:41,974 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2023-06-29T02:59:41,983 creating build/lib/funid/external/Gblocks_Windows_0.91b 2023-06-29T02:59:41,984 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:41,985 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:41,993 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:41,995 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:41,997 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-29T02:59:41,999 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-29T02:59:42,003 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:42,004 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:42,007 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:42,009 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:42,012 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:42,014 creating build/lib/funid/external/RAxML_Windows 2023-06-29T02:59:42,015 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2023-06-29T02:59:42,019 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2023-06-29T02:59:42,021 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2023-06-29T02:59:42,047 creating build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:42,048 copying funid/external/iqtree-2.1.3-Windows/example.cf -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:42,084 copying funid/external/iqtree-2.1.3-Windows/example.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:42,087 copying funid/external/iqtree-2.1.3-Windows/example.phy -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:42,090 copying funid/external/iqtree-2.1.3-Windows/models.nex -> build/lib/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:42,094 creating build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-29T02:59:42,095 copying funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-29T02:59:42,243 copying funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.1.3-Windows/bin 2023-06-29T02:59:42,263 creating build/lib/funid/external/mmseqs_Windows 2023-06-29T02:59:42,264 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2023-06-29T02:59:42,267 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2023-06-29T02:59:42,270 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2023-06-29T02:59:42,272 creating build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,273 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,285 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,288 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,292 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,299 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,338 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,397 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,404 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:42,603 creating build/lib/funid/external/mmseqs_Windows/examples 2023-06-29T02:59:42,605 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2023-06-29T02:59:42,612 creating build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,613 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,616 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,618 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,621 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,623 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,626 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,628 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,631 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,633 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,636 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,638 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,641 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,643 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,645 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,648 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,650 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,652 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,655 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,657 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,659 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,662 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,665 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,668 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,670 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,673 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,676 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,678 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,681 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,683 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,686 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,688 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,691 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,693 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,696 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,698 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,701 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,703 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,706 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,708 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,711 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,713 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,716 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:42,718 creating build/lib/funid/external/mmseqs_Windows/util 2023-06-29T02:59:42,719 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2023-06-29T02:59:42,722 creating build/lib/funid/external/trimal.v1.2rev59 2023-06-29T02:59:42,723 creating build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:42,724 copying funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:42,727 copying funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:42,730 copying funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:42,733 copying funid/external/trimal.v1.2rev59/trimAl/README -> build/lib/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:42,735 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-29T02:59:42,737 copying funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-29T02:59:42,750 creating build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,751 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,755 copying funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,759 copying funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,761 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,765 copying funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,767 copying funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,771 copying funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,774 copying funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,777 copying funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,781 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,784 copying funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,786 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,789 copying funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,792 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,795 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,798 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,801 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,803 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,807 copying funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,809 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,812 copying funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,815 copying funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:42,818 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2023-06-29T02:59:42,821 copying funid/data/genus_line.txt -> build/lib/funid/data 2023-06-29T02:59:42,824 creating build/lib/funid/test_dataset 2023-06-29T02:59:42,825 creating build/lib/funid/test_dataset/penicillium 2023-06-29T02:59:42,827 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2023-06-29T02:59:42,829 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2023-06-29T02:59:42,832 creating build/lib/funid/test_dataset/penicillium/DB 2023-06-29T02:59:42,833 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2023-06-29T02:59:42,844 creating build/lib/funid/test_dataset/penicillium/Query 2023-06-29T02:59:42,845 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2023-06-29T02:59:42,849 creating build/lib/funid/preset 2023-06-29T02:59:42,850 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2023-06-29T02:59:42,852 copying funid/preset/fast.yaml -> build/lib/funid/preset 2023-06-29T02:59:42,889 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-06-29T02:59:42,889 !! 2023-06-29T02:59:42,889 ******************************************************************************** 2023-06-29T02:59:42,889 Please avoid running ``setup.py`` directly. 2023-06-29T02:59:42,889 Instead, use pypa/build, pypa/installer, pypa/build or 2023-06-29T02:59:42,889 other standards-based tools. 2023-06-29T02:59:42,890 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-06-29T02:59:42,890 ******************************************************************************** 2023-06-29T02:59:42,890 !! 2023-06-29T02:59:42,890 self.initialize_options() 2023-06-29T02:59:42,919 installing to build/bdist.linux-armv7l/wheel 2023-06-29T02:59:42,919 running install 2023-06-29T02:59:42,945 running install_lib 2023-06-29T02:59:42,974 creating build/bdist.linux-armv7l 2023-06-29T02:59:42,975 creating build/bdist.linux-armv7l/wheel 2023-06-29T02:59:42,977 creating build/bdist.linux-armv7l/wheel/funid 2023-06-29T02:59:42,979 creating build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,981 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,984 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,987 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,989 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,992 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,995 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:42,997 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,001 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,003 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,006 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,009 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,011 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,014 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,017 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,019 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,023 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,025 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,028 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,031 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,033 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,035 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,037 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,040 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,043 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,045 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,048 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2023-06-29T02:59:43,050 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-29T02:59:43,054 creating build/bdist.linux-armv7l/wheel/funid/data 2023-06-29T02:59:43,055 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-29T02:59:43,058 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-29T02:59:43,060 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2023-06-29T02:59:43,064 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2023-06-29T02:59:43,065 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-29T02:59:43,067 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-29T02:59:43,069 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2023-06-29T02:59:43,072 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-06-29T02:59:43,073 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2023-06-29T02:59:43,084 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-06-29T02:59:43,085 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2023-06-29T02:59:43,088 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-29T02:59:43,092 creating build/bdist.linux-armv7l/wheel/funid/preset 2023-06-29T02:59:43,093 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-06-29T02:59:43,096 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2023-06-29T02:59:43,098 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2023-06-29T02:59:43,100 creating build/bdist.linux-armv7l/wheel/funid/external 2023-06-29T02:59:43,102 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2023-06-29T02:59:43,104 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:43,106 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-29T02:59:43,107 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2023-06-29T02:59:43,111 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:43,113 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:43,116 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:43,119 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:43,121 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2023-06-29T02:59:43,124 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:43,126 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:43,135 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2023-06-29T02:59:43,138 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-29T02:59:43,139 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-29T02:59:43,142 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-29T02:59:43,145 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2023-06-29T02:59:43,172 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-29T02:59:43,555 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-06-29T02:59:43,555 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2023-06-29T02:59:43,563 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-06-29T02:59:43,564 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2023-06-29T02:59:43,568 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-06-29T02:59:43,568 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2023-06-29T02:59:43,571 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:43,572 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:43,576 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:43,579 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:43,755 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:43,757 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:43,760 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:44,011 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2023-06-29T02:59:44,015 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:44,016 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:44,020 copying build/lib/funid/external/iqtree-2.1.3-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:44,025 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:44,028 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-29T02:59:44,029 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-29T02:59:44,051 copying build/lib/funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows/bin 2023-06-29T02:59:44,200 copying build/lib/funid/external/iqtree-2.1.3-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.1.3-Windows 2023-06-29T02:59:44,237 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-29T02:59:44,240 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2023-06-29T02:59:44,242 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59 2023-06-29T02:59:44,243 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:44,245 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:44,247 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:44,250 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:44,255 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,256 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,261 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,264 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,267 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,270 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,274 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,277 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,280 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,283 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,285 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,288 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,291 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,294 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,299 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,302 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,305 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,307 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,312 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,314 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,317 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,319 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,322 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/source 2023-06-29T02:59:44,327 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-29T02:59:44,328 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl/bin 2023-06-29T02:59:44,342 copying build/lib/funid/external/trimal.v1.2rev59/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.2rev59/trimAl 2023-06-29T02:59:44,344 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-29T02:59:44,346 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-06-29T02:59:44,347 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2023-06-29T02:59:44,355 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-29T02:59:44,359 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,360 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,363 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,365 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,368 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,370 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,373 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,376 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,378 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,380 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,383 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,385 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,387 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,390 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,392 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,394 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,397 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,399 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,401 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,404 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,407 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,409 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,412 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,414 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,416 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,418 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,421 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,424 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,427 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,429 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,432 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,435 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,438 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,441 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,444 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,446 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,449 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,451 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,453 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,455 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,458 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,460 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,463 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2023-06-29T02:59:44,465 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-29T02:59:44,469 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-06-29T02:59:44,470 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2023-06-29T02:59:44,472 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2023-06-29T02:59:44,476 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,477 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,669 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,675 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,678 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,688 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,721 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,788 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,792 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2023-06-29T02:59:44,796 running install_egg_info 2023-06-29T02:59:44,828 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.11.1-py3.9.egg-info 2023-06-29T02:59:44,842 running install_scripts 2023-06-29T02:59:44,866 creating build/bdist.linux-armv7l/wheel/FunID-0.3.11.1.dist-info/WHEEL 2023-06-29T02:59:44,868 creating '/tmp/pip-wheel-ge7q8w40/FunID-0.3.11.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-06-29T02:59:44,873 adding 'funid/FunID_GUI.py' 2023-06-29T02:59:44,875 adding 'funid/__init__.py' 2023-06-29T02:59:44,877 adding 'funid/main.py' 2023-06-29T02:59:44,881 adding 'funid/data/Option_manager.xlsx' 2023-06-29T02:59:44,882 adding 'funid/data/__init__.py' 2023-06-29T02:59:44,890 adding 'funid/data/genus_line.txt' 2023-06-29T02:59:44,897 adding 'funid/external/MAFFT_LICENSE' 2023-06-29T02:59:47,958 adding 'funid/external/MAFFT_Windows.zip' 2023-06-29T02:59:48,126 adding 'funid/external/__init__.py' 2023-06-29T02:59:48,135 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2023-06-29T02:59:51,106 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2023-06-29T02:59:51,211 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2023-06-29T02:59:51,213 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2023-06-29T02:59:51,217 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2023-06-29T02:59:53,280 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2023-06-29T02:59:53,380 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2023-06-29T02:59:53,384 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2023-06-29T02:59:53,386 adding 'funid/external/BLAST_Windows/doc/README.txt' 2023-06-29T02:59:53,443 adding 'funid/external/FastTree_Windows/FastTree.exe' 2023-06-29T02:59:53,484 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2023-06-29T02:59:53,487 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2023-06-29T02:59:53,488 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2023-06-29T02:59:53,493 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2023-06-29T02:59:53,496 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2023-06-29T02:59:53,498 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2023-06-29T02:59:53,500 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2023-06-29T02:59:53,502 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2023-06-29T02:59:53,509 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2023-06-29T02:59:53,511 adding 'funid/external/RAxML_Windows/README' 2023-06-29T02:59:53,804 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2023-06-29T02:59:53,896 adding 'funid/external/iqtree-2.1.3-Windows/example.cf' 2023-06-29T02:59:53,911 adding 'funid/external/iqtree-2.1.3-Windows/example.nex' 2023-06-29T02:59:53,924 adding 'funid/external/iqtree-2.1.3-Windows/example.phy' 2023-06-29T02:59:53,955 adding 'funid/external/iqtree-2.1.3-Windows/models.nex' 2023-06-29T02:59:55,679 adding 'funid/external/iqtree-2.1.3-Windows/bin/iqtree2.exe' 2023-06-29T02:59:55,929 adding 'funid/external/iqtree-2.1.3-Windows/bin/libiomp5md.dll' 2023-06-29T02:59:55,943 adding 'funid/external/mmseqs_Windows/LICENSE.md' 2023-06-29T02:59:55,945 adding 'funid/external/mmseqs_Windows/README.md' 2023-06-29T02:59:55,947 adding 'funid/external/mmseqs_Windows/mmseqs.bat' 2023-06-29T02:59:56,080 adding 'funid/external/mmseqs_Windows/bin/busybox.exe' 2023-06-29T02:59:56,095 adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll' 2023-06-29T02:59:56,109 adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2023-06-29T02:59:56,152 adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll' 2023-06-29T02:59:56,416 adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2023-06-29T02:59:57,018 adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll' 2023-06-29T02:59:57,055 adding 'funid/external/mmseqs_Windows/bin/cygz.dll' 2023-06-29T03:00:00,382 adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe' 2023-06-29T03:00:00,548 adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta' 2023-06-29T03:00:00,552 adding 'funid/external/mmseqs_Windows/matrices/PAM10.out' 2023-06-29T03:00:00,554 adding 'funid/external/mmseqs_Windows/matrices/PAM100.out' 2023-06-29T03:00:00,555 adding 'funid/external/mmseqs_Windows/matrices/PAM110.out' 2023-06-29T03:00:00,556 adding 'funid/external/mmseqs_Windows/matrices/PAM120.out' 2023-06-29T03:00:00,557 adding 'funid/external/mmseqs_Windows/matrices/PAM130.out' 2023-06-29T03:00:00,559 adding 'funid/external/mmseqs_Windows/matrices/PAM140.out' 2023-06-29T03:00:00,560 adding 'funid/external/mmseqs_Windows/matrices/PAM150.out' 2023-06-29T03:00:00,561 adding 'funid/external/mmseqs_Windows/matrices/PAM160.out' 2023-06-29T03:00:00,563 adding 'funid/external/mmseqs_Windows/matrices/PAM170.out' 2023-06-29T03:00:00,564 adding 'funid/external/mmseqs_Windows/matrices/PAM180.out' 2023-06-29T03:00:00,565 adding 'funid/external/mmseqs_Windows/matrices/PAM190.out' 2023-06-29T03:00:00,567 adding 'funid/external/mmseqs_Windows/matrices/PAM20.out' 2023-06-29T03:00:00,568 adding 'funid/external/mmseqs_Windows/matrices/PAM30.out' 2023-06-29T03:00:00,569 adding 'funid/external/mmseqs_Windows/matrices/PAM40.out' 2023-06-29T03:00:00,571 adding 'funid/external/mmseqs_Windows/matrices/PAM50.out' 2023-06-29T03:00:00,572 adding 'funid/external/mmseqs_Windows/matrices/PAM60.out' 2023-06-29T03:00:00,573 adding 'funid/external/mmseqs_Windows/matrices/PAM70.out' 2023-06-29T03:00:00,574 adding 'funid/external/mmseqs_Windows/matrices/PAM80.out' 2023-06-29T03:00:00,576 adding 'funid/external/mmseqs_Windows/matrices/PAM90.out' 2023-06-29T03:00:00,577 adding 'funid/external/mmseqs_Windows/matrices/VTML10.out' 2023-06-29T03:00:00,578 adding 'funid/external/mmseqs_Windows/matrices/VTML120.out' 2023-06-29T03:00:00,580 adding 'funid/external/mmseqs_Windows/matrices/VTML160.out' 2023-06-29T03:00:00,581 adding 'funid/external/mmseqs_Windows/matrices/VTML20.out' 2023-06-29T03:00:00,582 adding 'funid/external/mmseqs_Windows/matrices/VTML40.out' 2023-06-29T03:00:00,584 adding 'funid/external/mmseqs_Windows/matrices/VTML80.out' 2023-06-29T03:00:00,585 adding 'funid/external/mmseqs_Windows/matrices/blosum100.out' 2023-06-29T03:00:00,587 adding 'funid/external/mmseqs_Windows/matrices/blosum30.out' 2023-06-29T03:00:00,589 adding 'funid/external/mmseqs_Windows/matrices/blosum35.out' 2023-06-29T03:00:00,590 adding 'funid/external/mmseqs_Windows/matrices/blosum40.out' 2023-06-29T03:00:00,592 adding 'funid/external/mmseqs_Windows/matrices/blosum45.out' 2023-06-29T03:00:00,593 adding 'funid/external/mmseqs_Windows/matrices/blosum50.out' 2023-06-29T03:00:00,595 adding 'funid/external/mmseqs_Windows/matrices/blosum55.out' 2023-06-29T03:00:00,596 adding 'funid/external/mmseqs_Windows/matrices/blosum60.out' 2023-06-29T03:00:00,597 adding 'funid/external/mmseqs_Windows/matrices/blosum62.out' 2023-06-29T03:00:00,599 adding 'funid/external/mmseqs_Windows/matrices/blosum65.out' 2023-06-29T03:00:00,600 adding 'funid/external/mmseqs_Windows/matrices/blosum70.out' 2023-06-29T03:00:00,602 adding 'funid/external/mmseqs_Windows/matrices/blosum75.out' 2023-06-29T03:00:00,603 adding 'funid/external/mmseqs_Windows/matrices/blosum80.out' 2023-06-29T03:00:00,605 adding 'funid/external/mmseqs_Windows/matrices/blosum85.out' 2023-06-29T03:00:00,606 adding 'funid/external/mmseqs_Windows/matrices/blosum90.out' 2023-06-29T03:00:00,608 adding 'funid/external/mmseqs_Windows/matrices/blosum95.out' 2023-06-29T03:00:00,609 adding 'funid/external/mmseqs_Windows/matrices/nucleotide.out' 2023-06-29T03:00:00,610 adding 'funid/external/mmseqs_Windows/util/bash-completion.sh' 2023-06-29T03:00:00,612 adding 'funid/external/trimal.v1.2rev59/trimAl/AUTHORS' 2023-06-29T03:00:00,614 adding 'funid/external/trimal.v1.2rev59/trimAl/CHANGELOG' 2023-06-29T03:00:00,620 adding 'funid/external/trimal.v1.2rev59/trimAl/LICENSE' 2023-06-29T03:00:00,621 adding 'funid/external/trimal.v1.2rev59/trimAl/README' 2023-06-29T03:00:00,712 adding 'funid/external/trimal.v1.2rev59/trimAl/bin/trimal.exe' 2023-06-29T03:00:00,724 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.cpp' 2023-06-29T03:00:00,726 adding 'funid/external/trimal.v1.2rev59/trimAl/source/alignment.h' 2023-06-29T03:00:00,728 adding 'funid/external/trimal.v1.2rev59/trimAl/source/autAlignment.cpp' 2023-06-29T03:00:00,730 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.cpp' 2023-06-29T03:00:00,731 adding 'funid/external/trimal.v1.2rev59/trimAl/source/compareFiles.h' 2023-06-29T03:00:00,736 adding 'funid/external/trimal.v1.2rev59/trimAl/source/main.cpp' 2023-06-29T03:00:00,738 adding 'funid/external/trimal.v1.2rev59/trimAl/source/makefile' 2023-06-29T03:00:00,740 adding 'funid/external/trimal.v1.2rev59/trimAl/source/readAl.cpp' 2023-06-29T03:00:00,745 adding 'funid/external/trimal.v1.2rev59/trimAl/source/rwAlignment.cpp' 2023-06-29T03:00:00,747 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.cpp' 2023-06-29T03:00:00,748 adding 'funid/external/trimal.v1.2rev59/trimAl/source/sequencesMatrix.h' 2023-06-29T03:00:00,750 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.cpp' 2023-06-29T03:00:00,752 adding 'funid/external/trimal.v1.2rev59/trimAl/source/similarityMatrix.h' 2023-06-29T03:00:00,754 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.cpp' 2023-06-29T03:00:00,756 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsConservation.h' 2023-06-29T03:00:00,757 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.cpp' 2023-06-29T03:00:00,758 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsFiles.h' 2023-06-29T03:00:00,761 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.cpp' 2023-06-29T03:00:00,762 adding 'funid/external/trimal.v1.2rev59/trimAl/source/statisticsGaps.h' 2023-06-29T03:00:00,764 adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.cpp' 2023-06-29T03:00:00,765 adding 'funid/external/trimal.v1.2rev59/trimAl/source/utils.h' 2023-06-29T03:00:00,767 adding 'funid/external/trimal.v1.2rev59/trimAl/source/values.h' 2023-06-29T03:00:00,768 adding 'funid/preset/accurate.yaml' 2023-06-29T03:00:00,770 adding 'funid/preset/fast.yaml' 2023-06-29T03:00:00,772 adding 'funid/src/__init__.py' 2023-06-29T03:00:00,773 adding 'funid/src/align.py' 2023-06-29T03:00:00,776 adding 'funid/src/cluster.py' 2023-06-29T03:00:00,778 adding 'funid/src/command.py' 2023-06-29T03:00:00,780 adding 'funid/src/concatenate.py' 2023-06-29T03:00:00,782 adding 'funid/src/dataset.py' 2023-06-29T03:00:00,784 adding 'funid/src/ext.py' 2023-06-29T03:00:00,786 adding 'funid/src/hasher.py' 2023-06-29T03:00:00,788 adding 'funid/src/initialize.py' 2023-06-29T03:00:00,789 adding 'funid/src/logger.py' 2023-06-29T03:00:00,790 adding 'funid/src/logics.py' 2023-06-29T03:00:00,794 adding 'funid/src/manage_input.py' 2023-06-29T03:00:00,796 adding 'funid/src/modeltest.py' 2023-06-29T03:00:00,797 adding 'funid/src/ncbi.py' 2023-06-29T03:00:00,799 adding 'funid/src/opt_generator.py' 2023-06-29T03:00:00,800 adding 'funid/src/patch.py' 2023-06-29T03:00:00,804 adding 'funid/src/reporter.py' 2023-06-29T03:00:00,806 adding 'funid/src/save.py' 2023-06-29T03:00:00,808 adding 'funid/src/search.py' 2023-06-29T03:00:00,810 adding 'funid/src/tool.py' 2023-06-29T03:00:00,811 adding 'funid/src/tree.py' 2023-06-29T03:00:00,816 adding 'funid/src/tree_interpretation.py' 2023-06-29T03:00:00,819 adding 'funid/src/tree_interpretation_pipe.py' 2023-06-29T03:00:00,820 adding 'funid/src/trim.py' 2023-06-29T03:00:00,826 adding 'funid/src/validate_option.py' 2023-06-29T03:00:00,827 adding 'funid/src/validation.py' 2023-06-29T03:00:00,830 adding 'funid/test_dataset/penicillium/Options.config' 2023-06-29T03:00:00,831 adding 'funid/test_dataset/penicillium/preset.yaml' 2023-06-29T03:00:00,869 adding 'funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx' 2023-06-29T03:00:00,877 adding 'funid/test_dataset/penicillium/Query/Query.xlsx' 2023-06-29T03:00:00,883 adding 'FunID-0.3.11.1.dist-info/LICENSE' 2023-06-29T03:00:00,885 adding 'FunID-0.3.11.1.dist-info/METADATA' 2023-06-29T03:00:00,886 adding 'FunID-0.3.11.1.dist-info/WHEEL' 2023-06-29T03:00:00,887 adding 'FunID-0.3.11.1.dist-info/entry_points.txt' 2023-06-29T03:00:00,887 adding 'FunID-0.3.11.1.dist-info/top_level.txt' 2023-06-29T03:00:00,890 adding 'FunID-0.3.11.1.dist-info/RECORD' 2023-06-29T03:00:01,301 removing build/bdist.linux-armv7l/wheel 2023-06-29T03:00:01,456 Building wheel for funid (setup.py): finished with status 'done' 2023-06-29T03:00:01,973 Created wheel for funid: filename=FunID-0.3.11.1-py3-none-any.whl size=51527429 sha256=0b9e179e7311ba0893697757fa065752cf5b0629ba6f3f38e1025e335e74b3a8 2023-06-29T03:00:01,974 Stored in directory: /tmp/pip-ephem-wheel-cache-sih1q850/wheels/91/0d/b4/e329404e3f014c476dbdad3241f38e33834a32efc5a25aff8f 2023-06-29T03:00:02,006 Successfully built funid 2023-06-29T03:00:03,218 Removed build tracker: '/tmp/pip-build-tracker-vyskgpif'