2023-07-02T09:19:51,955 Created temporary directory: /tmp/pip-build-tracker-ta3uvvv2 2023-07-02T09:19:51,956 Initialized build tracking at /tmp/pip-build-tracker-ta3uvvv2 2023-07-02T09:19:51,957 Created build tracker: /tmp/pip-build-tracker-ta3uvvv2 2023-07-02T09:19:51,957 Entered build tracker: /tmp/pip-build-tracker-ta3uvvv2 2023-07-02T09:19:51,957 Created temporary directory: /tmp/pip-wheel-gqm4gv6y 2023-07-02T09:19:51,960 Created temporary directory: /tmp/pip-ephem-wheel-cache-tpfputr1 2023-07-02T09:19:51,984 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-02T09:19:51,987 2 location(s) to search for versions of pyobo: 2023-07-02T09:19:51,987 * https://pypi.org/simple/pyobo/ 2023-07-02T09:19:51,987 * https://www.piwheels.org/simple/pyobo/ 2023-07-02T09:19:51,987 Fetching project page and analyzing links: https://pypi.org/simple/pyobo/ 2023-07-02T09:19:51,988 Getting page https://pypi.org/simple/pyobo/ 2023-07-02T09:19:51,989 Found index url https://pypi.org/simple/ 2023-07-02T09:19:52,054 Fetched page https://pypi.org/simple/pyobo/ as application/vnd.pypi.simple.v1+json 2023-07-02T09:19:52,073 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/98/5e/ad7ea3dab1d88562b4ccf8873bfab9c49117343adbead05aff3d31ab6bc9/pyobo-0.0.1-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6) 2023-07-02T09:19:52,074 Found link https://files.pythonhosted.org/packages/9e/97/87e030c2c9e7af6ad6efae9615fae22e55782f97232113cbde014685bd5d/pyobo-0.0.1.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6), version: 0.0.1 2023-07-02T09:19:52,075 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/ae/3c/a49046cd777ecde3b93aa287595d97889b19f25a27ff3262e07303477629/pyobo-0.0.2-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,075 Found link https://files.pythonhosted.org/packages/e4/65/63519297121c87f4f86f99444043734f2eaebe083541e588475f77622284/pyobo-0.0.2.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.0.2 2023-07-02T09:19:52,075 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/30/c1/4c7e619de5335d05a503530dbff450dbb3ba10b2e50775308f23edc62dc4/pyobo-0.0.3-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,076 Found link https://files.pythonhosted.org/packages/6d/60/0378905c3a343db9d89179bcb84f0c8d29387d7c322fab2aa73f7b4734d2/pyobo-0.0.3.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.0.3 2023-07-02T09:19:52,076 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/b6/b3/3ce0c93c64fbc62a618c2a84892503ac438e2e4008c58c737401b1fac69c/pyobo-0.0.4-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,077 Found link https://files.pythonhosted.org/packages/3a/77/399811b835d969bfb9ca11665192feb3d77ccdc814df1cb3a55de8ee6703/pyobo-0.0.4.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.0.4 2023-07-02T09:19:52,077 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/75/bc/9494351b989734fff9c48c8f78d8588c1cbd45a30504ce0db3bf8c4d24f3/pyobo-0.0.5-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,077 Found link https://files.pythonhosted.org/packages/d8/4d/6a4352fbdd9826bae90c9745ad7e2a2dda0982b266e5ebad41c3a68259a0/pyobo-0.0.5.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.0.5 2023-07-02T09:19:52,078 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/73/45/0b78d73ff6f0b3a2f45db53d02d2761f4785b7abc3894b01859061f24313/pyobo-0.0.6-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,078 Found link https://files.pythonhosted.org/packages/61/98/486dadecc83fbbd5d49648dd09a0d05d91501f4a7be461ba37a37fd711b6/pyobo-0.0.6.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.0.6 2023-07-02T09:19:52,078 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/d4/f1/e5fc418924c64b351b73a1ab496e98530033d285fd2bba61a31e17819833/pyobo-0.0.7-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,079 Found link https://files.pythonhosted.org/packages/7f/43/adfd5d951cbbf3a90f721a031d0236de5ed4eafa9986e070243f21708c27/pyobo-0.0.7.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.0.7 2023-07-02T09:19:52,079 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/f1/64/a51f3a9afc7a8b48df5e12260a97147770c7a01cde9bea622ec1542b679b/pyobo-0.1.0-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,080 Found link https://files.pythonhosted.org/packages/d7/87/9df6babfd05066e6b3053c2cc2e84cde0bcb51f0dfb3d84644c4887338d4/pyobo-0.1.0.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.1.0 2023-07-02T09:19:52,080 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/16/13/e4c80bcce8ecf7a0b87c82e510655799d58700b589a666d0af1561bbe4e7/pyobo-0.1.1-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,080 Found link https://files.pythonhosted.org/packages/64/ef/56ba6c14369ab67be4a3eb1a5fa5f5c5f95da2f76efc83fa742b47fdfd96/pyobo-0.1.1.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.1.1 2023-07-02T09:19:52,081 Skipping link: No binaries permitted for pyobo: 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link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/74/86/85176fa9587fb42a17fa7d942fd3e7513228838d8da1b8ccd4d92b61c495/pyobo-0.2.2-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,085 Found link https://files.pythonhosted.org/packages/43/15/9e745fbc81bf514d1ebb5d75cf0a9c413e85668d29dc198617511135842a/pyobo-0.2.2.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.2 2023-07-02T09:19:52,085 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/52/b9/c6ac012e8f2ff75cb695ed9fa24b2b6e5627c4ad5e120b81e439309799e9/pyobo-0.2.3-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,086 Found link https://files.pythonhosted.org/packages/c1/c6/3c8f9ddbd162dde3f32dcce31cf3874cb2252b4fd800547410234f1dcfd1/pyobo-0.2.3.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.3 2023-07-02T09:19:52,086 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/60/fb/68a66841d481f2c965ec1fbe5e5d51f815ad0e63b7dbeb697dc8f8c6bde8/pyobo-0.2.4-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,086 Found link https://files.pythonhosted.org/packages/17/72/9da15b783fda89d16e6b4e1b3002b1edef6a65258e8fb639609c0d3dfb41/pyobo-0.2.4.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.4 2023-07-02T09:19:52,087 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/03/40/0132f29aa34cdc8d3d625017621979f0cc783ce9f80d8cb04370417c6eb3/pyobo-0.2.5-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,087 Found link https://files.pythonhosted.org/packages/52/97/2812dd52233d4de0eb8da355bfab57f4dcd281edaaac1ef7a5d5bd0af83d/pyobo-0.2.5.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.5 2023-07-02T09:19:52,087 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/c0/b4/e473bd4bc0fe07387b7bdcc649a88c8908e974a7fc41d4258ca53750331f/pyobo-0.2.6-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,088 Found link https://files.pythonhosted.org/packages/f5/4d/6921ae12969e143544b82fe15b375d98d167e1970c4002e305acb9d647b6/pyobo-0.2.6.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7), version: 0.2.6 2023-07-02T09:19:52,088 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/a3/f7/e1c7b633b29ef23607a28ebb86184446a8de21406790918b800d975ff4f6/pyobo-0.2.7-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,089 Found link https://files.pythonhosted.org/packages/fc/ca/ba5a4873350af8728238e3b4f7d20b46db85ebda7e7d4d50121ec2b9b4ab/pyobo-0.2.7.tar.gz (from 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https://files.pythonhosted.org/packages/3c/53/0330f38257341dd6c56b9d8fdd43129c3a5a5deb92baf451564500d28a7f/pyobo-0.2.9.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6), version: 0.2.9 2023-07-02T09:19:52,090 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/2f/a2/5ff31047732ec579259f71c9a9479c4c6fa009b61168a9d082c4685738a0/pyobo-0.2.10-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6) 2023-07-02T09:19:52,091 Found link https://files.pythonhosted.org/packages/01/84/b87a3934b0a0dd07076a7fc2b5ab89ad8473de7a1920aae635860eb7bcba/pyobo-0.2.10.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6), version: 0.2.10 2023-07-02T09:19:52,091 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/62/a9/39d88d9d759bc91688de3337b523dd2467a399775fffa39ec4f4a96a0b97/pyobo-0.2.11-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6) 2023-07-02T09:19:52,092 Found link https://files.pythonhosted.org/packages/df/ff/20c75c9c073a565bd8c5edfbcf96b6281f0cff8cb94005395edfc247f709/pyobo-0.2.11.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6), version: 0.2.11 2023-07-02T09:19:52,092 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/b6/c2/fbdcfa4cf0d2b0923a930482f22510e768a9b41a42b527c7081237d1546a/pyobo-0.2.12-py3-none-any.whl (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6) 2023-07-02T09:19:52,093 Found link https://files.pythonhosted.org/packages/e0/58/d7f1e300032ce9963b260831fca7ad2ea87ba866eeb4c574484ac68f61db/pyobo-0.2.12.tar.gz (from https://pypi.org/simple/pyobo/) (requires-python:>=3.6), version: 0.2.12 2023-07-02T09:19:52,093 Skipping link: No binaries permitted for pyobo: https://files.pythonhosted.org/packages/fb/f2/7323ad8ebaa183b9c41a9dd3d3661cbc489a0c467cdc9b82a7ec4eee4972/pyobo-0.2.13-py3-none-any.whl (from https://pypi.org/simple/pyobo/) 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https://www.piwheels.org/simple/pyobo/pyobo-0.0.2-py3-none-any.whl#sha256=9c2d580cffab8a8ca4ae56b615ddb82ed18a1d7e174818557da52dba258eaa46 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.7) 2023-07-02T09:19:52,303 Skipping link: No binaries permitted for pyobo: https://www.piwheels.org/simple/pyobo/pyobo-0.0.1-py3-none-any.whl#sha256=fa8b0bd5daff8df2ad48a133514a2b5fee29f18f806465ef49f7cc12042c4e51 (from https://www.piwheels.org/simple/pyobo/) (requires-python:>=3.6) 2023-07-02T09:19:52,304 Skipping link: not a file: https://www.piwheels.org/simple/pyobo/ 2023-07-02T09:19:52,304 Skipping link: not a file: https://pypi.org/simple/pyobo/ 2023-07-02T09:19:52,329 Given no hashes to check 1 links for project 'pyobo': discarding no candidates 2023-07-02T09:19:52,346 Collecting pyobo==0.9.1 2023-07-02T09:19:52,348 Created temporary directory: /tmp/pip-unpack-2jl0ndwx 2023-07-02T09:19:52,562 Downloading pyobo-0.9.1.tar.gz (23.1 MB) 2023-07-02T09:19:57,821 Added pyobo==0.9.1 from https://files.pythonhosted.org/packages/8d/40/fc22edd37448b159806eaf1980329f859e00d561d90ae958b34519f327f1/pyobo-0.9.1.tar.gz to build tracker '/tmp/pip-build-tracker-ta3uvvv2' 2023-07-02T09:19:57,825 Created temporary directory: /tmp/pip-build-env-cxrwfp_k 2023-07-02T09:19:57,835 Installing build dependencies: started 2023-07-02T09:19:57,836 Running command pip subprocess to install build dependencies 2023-07-02T09:19:58,989 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-02T09:19:59,343 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-02T09:20:01,038 Collecting setuptools 2023-07-02T09:20:01,123 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-02T09:20:01,391 Collecting wheel 2023-07-02T09:20:01,409 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-07-02T09:20:03,184 Installing collected packages: wheel, setuptools 2023-07-02T09:20:03,400 Creating /tmp/pip-build-env-cxrwfp_k/overlay/bin 2023-07-02T09:20:03,402 changing mode of /tmp/pip-build-env-cxrwfp_k/overlay/bin/wheel to 755 2023-07-02T09:20:05,496 Successfully installed setuptools-68.0.0 wheel-0.40.0 2023-07-02T09:20:05,760 Installing build dependencies: finished with status 'done' 2023-07-02T09:20:05,768 Getting requirements to build wheel: started 2023-07-02T09:20:05,769 Running command Getting requirements to build wheel 2023-07-02T09:20:06,515 running egg_info 2023-07-02T09:20:06,519 writing src/pyobo.egg-info/PKG-INFO 2023-07-02T09:20:06,522 writing dependency_links to src/pyobo.egg-info/dependency_links.txt 2023-07-02T09:20:06,524 writing entry points to src/pyobo.egg-info/entry_points.txt 2023-07-02T09:20:06,526 writing requirements to src/pyobo.egg-info/requires.txt 2023-07-02T09:20:06,527 writing top-level names to src/pyobo.egg-info/top_level.txt 2023-07-02T09:20:06,561 reading manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:06,579 reading manifest template 'MANIFEST.in' 2023-07-02T09:20:06,594 no previously-included directories found matching 'benchmarking' 2023-07-02T09:20:06,595 no previously-included directories found matching 'tests/.pytest_cache' 2023-07-02T09:20:06,660 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-07-02T09:20:06,662 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-07-02T09:20:06,663 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-07-02T09:20:06,665 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-07-02T09:20:06,666 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-07-02T09:20:06,668 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-07-02T09:20:06,669 warning: no previously-included files found matching '.bumpversion.cfg' 2023-07-02T09:20:06,669 warning: no previously-included files found matching 'Dockerfile' 2023-07-02T09:20:06,670 warning: no previously-included files found matching 'docker-compose.yml' 2023-07-02T09:20:06,672 adding license file 'LICENSE' 2023-07-02T09:20:06,687 writing manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:06,751 Getting requirements to build wheel: finished with status 'done' 2023-07-02T09:20:06,759 Created temporary directory: /tmp/pip-modern-metadata-xyck8sym 2023-07-02T09:20:06,762 Preparing metadata (pyproject.toml): started 2023-07-02T09:20:06,763 Running command Preparing metadata (pyproject.toml) 2023-07-02T09:20:07,342 running dist_info 2023-07-02T09:20:07,361 creating /tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info 2023-07-02T09:20:07,365 writing /tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/PKG-INFO 2023-07-02T09:20:07,369 writing dependency_links to /tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/dependency_links.txt 2023-07-02T09:20:07,371 writing entry points to /tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/entry_points.txt 2023-07-02T09:20:07,373 writing requirements to /tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/requires.txt 2023-07-02T09:20:07,374 writing top-level names to /tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/top_level.txt 2023-07-02T09:20:07,376 writing manifest file '/tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:07,409 reading manifest file '/tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:07,412 reading manifest template 'MANIFEST.in' 2023-07-02T09:20:07,426 no previously-included directories found matching 'benchmarking' 2023-07-02T09:20:07,427 no previously-included directories found matching 'tests/.pytest_cache' 2023-07-02T09:20:07,428 no previously-included directories found matching 'docs/source/api' 2023-07-02T09:20:07,497 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-07-02T09:20:07,498 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-07-02T09:20:07,499 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-07-02T09:20:07,500 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-07-02T09:20:07,501 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-07-02T09:20:07,502 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-07-02T09:20:07,503 warning: no previously-included files found matching '.bumpversion.cfg' 2023-07-02T09:20:07,504 warning: no previously-included files found matching 'Dockerfile' 2023-07-02T09:20:07,505 warning: no previously-included files found matching 'docker-compose.yml' 2023-07-02T09:20:07,506 adding license file 'LICENSE' 2023-07-02T09:20:07,519 writing manifest file '/tmp/pip-modern-metadata-xyck8sym/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:07,520 creating '/tmp/pip-modern-metadata-xyck8sym/pyobo-0.9.1.dist-info' 2023-07-02T09:20:07,700 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-02T09:20:07,707 Source in /tmp/pip-wheel-gqm4gv6y/pyobo_31668de74a4c4e5ea3dbce414aae29ee has version 0.9.1, which satisfies requirement pyobo==0.9.1 from https://files.pythonhosted.org/packages/8d/40/fc22edd37448b159806eaf1980329f859e00d561d90ae958b34519f327f1/pyobo-0.9.1.tar.gz 2023-07-02T09:20:07,708 Removed pyobo==0.9.1 from https://files.pythonhosted.org/packages/8d/40/fc22edd37448b159806eaf1980329f859e00d561d90ae958b34519f327f1/pyobo-0.9.1.tar.gz from build tracker '/tmp/pip-build-tracker-ta3uvvv2' 2023-07-02T09:20:07,716 Created temporary directory: /tmp/pip-unpack-7iskvolg 2023-07-02T09:20:07,716 Building wheels for collected packages: pyobo 2023-07-02T09:20:07,720 Created temporary directory: /tmp/pip-wheel-beeahjgp 2023-07-02T09:20:07,720 Destination directory: /tmp/pip-wheel-beeahjgp 2023-07-02T09:20:07,722 Building wheel for pyobo (pyproject.toml): started 2023-07-02T09:20:07,723 Running command Building wheel for pyobo (pyproject.toml) 2023-07-02T09:20:08,345 running bdist_wheel 2023-07-02T09:20:08,378 running build 2023-07-02T09:20:08,378 running build_py 2023-07-02T09:20:08,386 creating build 2023-07-02T09:20:08,386 creating build/lib 2023-07-02T09:20:08,387 creating build/lib/pyobo 2023-07-02T09:20:08,388 copying src/pyobo/getters.py -> build/lib/pyobo 2023-07-02T09:20:08,390 copying src/pyobo/constants.py -> build/lib/pyobo 2023-07-02T09:20:08,392 copying src/pyobo/obographs.py -> build/lib/pyobo 2023-07-02T09:20:08,394 copying src/pyobo/aws.py -> build/lib/pyobo 2023-07-02T09:20:08,396 copying src/pyobo/__main__.py -> build/lib/pyobo 2023-07-02T09:20:08,397 copying src/pyobo/__init__.py -> build/lib/pyobo 2023-07-02T09:20:08,399 copying src/pyobo/version.py -> build/lib/pyobo 2023-07-02T09:20:08,400 copying src/pyobo/identifier_utils.py -> build/lib/pyobo 2023-07-02T09:20:08,402 copying src/pyobo/resource_utils.py -> build/lib/pyobo 2023-07-02T09:20:08,404 copying src/pyobo/gilda_utils.py -> build/lib/pyobo 2023-07-02T09:20:08,406 copying src/pyobo/reader.py -> build/lib/pyobo 2023-07-02T09:20:08,408 copying src/pyobo/plugins.py -> build/lib/pyobo 2023-07-02T09:20:08,409 copying src/pyobo/normalizer.py -> build/lib/pyobo 2023-07-02T09:20:08,411 copying src/pyobo/mocks.py -> build/lib/pyobo 2023-07-02T09:20:08,415 creating build/lib/pyobo/sources 2023-07-02T09:20:08,416 copying src/pyobo/sources/pathbank.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,418 copying src/pyobo/sources/antibodyregistry.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,420 copying src/pyobo/sources/mirbase.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,422 copying src/pyobo/sources/mgi.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,424 copying src/pyobo/sources/itis.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,425 copying src/pyobo/sources/biogrid.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,427 copying src/pyobo/sources/pfam.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,428 copying src/pyobo/sources/hgncgenefamily.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,430 copying src/pyobo/sources/utils.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,431 copying src/pyobo/sources/drugbank.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,433 copying src/pyobo/sources/slm.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,435 copying src/pyobo/sources/agrovoc.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,436 copying src/pyobo/sources/flybase.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,438 copying src/pyobo/sources/cpt.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,440 copying src/pyobo/sources/famplex.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,442 copying src/pyobo/sources/ccle.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,443 copying src/pyobo/sources/complexportal.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,445 copying src/pyobo/sources/ncbigene.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,447 copying src/pyobo/sources/expasy.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,449 copying src/pyobo/sources/mesh.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,451 copying src/pyobo/sources/drugcentral.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,452 copying src/pyobo/sources/mirbase_family.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,454 copying src/pyobo/sources/drugbank_salt.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,456 copying src/pyobo/sources/rhea.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,457 copying src/pyobo/sources/icd_utils.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,459 copying src/pyobo/sources/sgd.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,460 copying src/pyobo/sources/dictybase_gene.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,462 copying src/pyobo/sources/zfin.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,464 copying src/pyobo/sources/__init__.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,466 copying src/pyobo/sources/msigdb.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,468 copying src/pyobo/sources/interpro.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,470 copying src/pyobo/sources/npass.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,471 copying src/pyobo/sources/chembl.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,474 copying src/pyobo/sources/mirbase_constants.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,475 copying src/pyobo/sources/conso.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,477 copying src/pyobo/sources/icd10.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,479 copying src/pyobo/sources/gmt_utils.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,480 copying src/pyobo/sources/pid.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,482 copying src/pyobo/sources/pubchem.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,484 copying src/pyobo/sources/wikipathways.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,486 copying src/pyobo/sources/pombase.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,487 copying src/pyobo/sources/pfam_clan.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,489 copying src/pyobo/sources/hgnc.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,491 copying src/pyobo/sources/reactome.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,493 copying src/pyobo/sources/cvx.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,495 copying src/pyobo/sources/gwascentral_phenotype.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,496 copying src/pyobo/sources/depmap.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,498 copying src/pyobo/sources/chebi.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,499 copying src/pyobo/sources/go.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,501 copying src/pyobo/sources/icd11.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,503 copying src/pyobo/sources/cgnc.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,504 copying src/pyobo/sources/gwascentral_study.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,506 copying src/pyobo/sources/mirbase_mature.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,508 copying src/pyobo/sources/rgd.py -> build/lib/pyobo/sources 2023-07-02T09:20:08,510 creating build/lib/pyobo/xrefdb 2023-07-02T09:20:08,511 copying src/pyobo/xrefdb/priority.py -> build/lib/pyobo/xrefdb 2023-07-02T09:20:08,513 copying src/pyobo/xrefdb/xrefs_pipeline.py -> build/lib/pyobo/xrefdb 2023-07-02T09:20:08,515 copying src/pyobo/xrefdb/bengo.py -> build/lib/pyobo/xrefdb 2023-07-02T09:20:08,517 copying src/pyobo/xrefdb/__init__.py -> build/lib/pyobo/xrefdb 2023-07-02T09:20:08,518 copying src/pyobo/xrefdb/canonicalizer.py -> build/lib/pyobo/xrefdb 2023-07-02T09:20:08,521 creating build/lib/pyobo/cli 2023-07-02T09:20:08,522 copying src/pyobo/cli/cli.py -> build/lib/pyobo/cli 2023-07-02T09:20:08,524 copying src/pyobo/cli/lookup.py -> build/lib/pyobo/cli 2023-07-02T09:20:08,526 copying src/pyobo/cli/utils.py -> build/lib/pyobo/cli 2023-07-02T09:20:08,527 copying src/pyobo/cli/aws.py -> build/lib/pyobo/cli 2023-07-02T09:20:08,529 copying src/pyobo/cli/database.py -> build/lib/pyobo/cli 2023-07-02T09:20:08,531 copying src/pyobo/cli/__init__.py -> build/lib/pyobo/cli 2023-07-02T09:20:08,533 creating build/lib/pyobo/registries 2023-07-02T09:20:08,534 copying src/pyobo/registries/metaregistry.py -> build/lib/pyobo/registries 2023-07-02T09:20:08,536 copying src/pyobo/registries/__init__.py -> build/lib/pyobo/registries 2023-07-02T09:20:08,538 creating build/lib/pyobo/resources 2023-07-02T09:20:08,539 copying src/pyobo/resources/ncbitaxon.py -> build/lib/pyobo/resources 2023-07-02T09:20:08,540 copying src/pyobo/resources/__init__.py -> build/lib/pyobo/resources 2023-07-02T09:20:08,542 copying src/pyobo/resources/ro.py -> build/lib/pyobo/resources 2023-07-02T09:20:08,544 creating build/lib/pyobo/apps 2023-07-02T09:20:08,545 copying src/pyobo/apps/cli.py -> build/lib/pyobo/apps 2023-07-02T09:20:08,547 copying src/pyobo/apps/__init__.py -> build/lib/pyobo/apps 2023-07-02T09:20:08,549 creating build/lib/pyobo/utils 2023-07-02T09:20:08,549 copying src/pyobo/utils/misc.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,551 copying src/pyobo/utils/path.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,553 copying src/pyobo/utils/cache.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,554 copying src/pyobo/utils/iter.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,556 copying src/pyobo/utils/__init__.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,557 copying src/pyobo/utils/io.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,560 copying src/pyobo/utils/ndex_utils.py -> build/lib/pyobo/utils 2023-07-02T09:20:08,562 creating build/lib/pyobo/struct 2023-07-02T09:20:08,563 copying src/pyobo/struct/utils.py -> build/lib/pyobo/struct 2023-07-02T09:20:08,564 copying src/pyobo/struct/reference.py -> build/lib/pyobo/struct 2023-07-02T09:20:08,566 copying src/pyobo/struct/__init__.py -> build/lib/pyobo/struct 2023-07-02T09:20:08,568 copying src/pyobo/struct/struct.py -> build/lib/pyobo/struct 2023-07-02T09:20:08,571 copying src/pyobo/struct/typedef.py -> build/lib/pyobo/struct 2023-07-02T09:20:08,573 creating build/lib/pyobo/ssg 2023-07-02T09:20:08,574 copying src/pyobo/ssg/__init__.py -> build/lib/pyobo/ssg 2023-07-02T09:20:08,577 creating build/lib/pyobo/api 2023-07-02T09:20:08,578 copying src/pyobo/api/typedefs.py -> build/lib/pyobo/api 2023-07-02T09:20:08,580 copying src/pyobo/api/utils.py -> build/lib/pyobo/api 2023-07-02T09:20:08,582 copying src/pyobo/api/relations.py -> build/lib/pyobo/api 2023-07-02T09:20:08,584 copying src/pyobo/api/species.py -> build/lib/pyobo/api 2023-07-02T09:20:08,585 copying src/pyobo/api/metadata.py -> build/lib/pyobo/api 2023-07-02T09:20:08,587 copying src/pyobo/api/__init__.py -> build/lib/pyobo/api 2023-07-02T09:20:08,588 copying src/pyobo/api/properties.py -> build/lib/pyobo/api 2023-07-02T09:20:08,590 copying src/pyobo/api/names.py -> build/lib/pyobo/api 2023-07-02T09:20:08,593 copying src/pyobo/api/hierarchy.py -> build/lib/pyobo/api 2023-07-02T09:20:08,595 copying src/pyobo/api/alts.py -> build/lib/pyobo/api 2023-07-02T09:20:08,596 copying src/pyobo/api/xrefs.py -> build/lib/pyobo/api 2023-07-02T09:20:08,599 creating build/lib/pyobo/sources/selventa 2023-07-02T09:20:08,600 copying src/pyobo/sources/selventa/scomp.py -> build/lib/pyobo/sources/selventa 2023-07-02T09:20:08,602 copying src/pyobo/sources/selventa/sfam.py -> build/lib/pyobo/sources/selventa 2023-07-02T09:20:08,603 copying src/pyobo/sources/selventa/__init__.py -> build/lib/pyobo/sources/selventa 2023-07-02T09:20:08,605 copying src/pyobo/sources/selventa/sdis.py -> build/lib/pyobo/sources/selventa 2023-07-02T09:20:08,606 copying src/pyobo/sources/selventa/schem.py -> build/lib/pyobo/sources/selventa 2023-07-02T09:20:08,608 creating build/lib/pyobo/sources/uniprot 2023-07-02T09:20:08,609 copying src/pyobo/sources/uniprot/__init__.py -> build/lib/pyobo/sources/uniprot 2023-07-02T09:20:08,611 copying src/pyobo/sources/uniprot/uniprot.py -> build/lib/pyobo/sources/uniprot 2023-07-02T09:20:08,612 copying src/pyobo/sources/uniprot/uniprot_ptm.py -> build/lib/pyobo/sources/uniprot 2023-07-02T09:20:08,615 creating build/lib/pyobo/sources/kegg 2023-07-02T09:20:08,615 copying src/pyobo/sources/kegg/genome.py -> build/lib/pyobo/sources/kegg 2023-07-02T09:20:08,617 copying src/pyobo/sources/kegg/api.py -> build/lib/pyobo/sources/kegg 2023-07-02T09:20:08,619 copying src/pyobo/sources/kegg/pathway.py -> build/lib/pyobo/sources/kegg 2023-07-02T09:20:08,621 copying src/pyobo/sources/kegg/genes.py -> build/lib/pyobo/sources/kegg 2023-07-02T09:20:08,623 copying src/pyobo/sources/kegg/__init__.py -> build/lib/pyobo/sources/kegg 2023-07-02T09:20:08,625 creating build/lib/pyobo/sources/umls 2023-07-02T09:20:08,626 copying src/pyobo/sources/umls/__main__.py -> build/lib/pyobo/sources/umls 2023-07-02T09:20:08,628 copying src/pyobo/sources/umls/__init__.py -> build/lib/pyobo/sources/umls 2023-07-02T09:20:08,629 copying src/pyobo/sources/umls/umls.py -> build/lib/pyobo/sources/umls 2023-07-02T09:20:08,632 creating build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,633 copying src/pyobo/xrefdb/sources/biomappings.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,635 copying src/pyobo/xrefdb/sources/cbms2019.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,637 copying src/pyobo/xrefdb/sources/wikidata.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,639 copying src/pyobo/xrefdb/sources/ncit.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,640 copying src/pyobo/xrefdb/sources/famplex.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,642 copying src/pyobo/xrefdb/sources/intact.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,644 copying src/pyobo/xrefdb/sources/__init__.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,645 copying src/pyobo/xrefdb/sources/compath.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,647 copying src/pyobo/xrefdb/sources/chembl.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,649 copying src/pyobo/xrefdb/sources/pubchem.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,650 copying src/pyobo/xrefdb/sources/gilda.py -> build/lib/pyobo/xrefdb/sources 2023-07-02T09:20:08,652 creating build/lib/pyobo/apps/mapper 2023-07-02T09:20:08,653 copying src/pyobo/apps/mapper/cli.py -> build/lib/pyobo/apps/mapper 2023-07-02T09:20:08,655 copying src/pyobo/apps/mapper/mapper.py -> build/lib/pyobo/apps/mapper 2023-07-02T09:20:08,657 copying src/pyobo/apps/mapper/__main__.py -> build/lib/pyobo/apps/mapper 2023-07-02T09:20:08,658 copying src/pyobo/apps/mapper/__init__.py -> build/lib/pyobo/apps/mapper 2023-07-02T09:20:08,661 creating build/lib/pyobo/apps/gilda 2023-07-02T09:20:08,661 copying src/pyobo/apps/gilda/cli.py -> build/lib/pyobo/apps/gilda 2023-07-02T09:20:08,663 copying src/pyobo/apps/gilda/__main__.py -> build/lib/pyobo/apps/gilda 2023-07-02T09:20:08,665 copying src/pyobo/apps/gilda/__init__.py -> build/lib/pyobo/apps/gilda 2023-07-02T09:20:08,666 copying src/pyobo/apps/gilda/app.py -> build/lib/pyobo/apps/gilda 2023-07-02T09:20:08,668 running egg_info 2023-07-02T09:20:08,685 writing src/pyobo.egg-info/PKG-INFO 2023-07-02T09:20:08,687 writing dependency_links to src/pyobo.egg-info/dependency_links.txt 2023-07-02T09:20:08,689 writing entry points to src/pyobo.egg-info/entry_points.txt 2023-07-02T09:20:08,691 writing requirements to src/pyobo.egg-info/requires.txt 2023-07-02T09:20:08,692 writing top-level names to src/pyobo.egg-info/top_level.txt 2023-07-02T09:20:08,713 reading manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:08,720 reading manifest template 'MANIFEST.in' 2023-07-02T09:20:08,734 no previously-included directories found matching 'benchmarking' 2023-07-02T09:20:08,735 no previously-included directories found matching 'tests/.pytest_cache' 2023-07-02T09:20:08,799 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-07-02T09:20:08,801 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-07-02T09:20:08,802 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-07-02T09:20:08,804 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2023-07-02T09:20:08,805 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-07-02T09:20:08,807 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2023-07-02T09:20:08,808 warning: no previously-included files found matching '.bumpversion.cfg' 2023-07-02T09:20:08,809 warning: no previously-included files found matching 'Dockerfile' 2023-07-02T09:20:08,809 warning: no previously-included files found matching 'docker-compose.yml' 2023-07-02T09:20:08,811 adding license file 'LICENSE' 2023-07-02T09:20:08,826 writing manifest file 'src/pyobo.egg-info/SOURCES.txt' 2023-07-02T09:20:08,832 /tmp/pip-build-env-cxrwfp_k/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyobo.apps.gilda.templates' is absent from the `packages` configuration. 2023-07-02T09:20:08,833 !! 2023-07-02T09:20:08,833 ******************************************************************************** 2023-07-02T09:20:08,833 ############################ 2023-07-02T09:20:08,833 # Package would be ignored # 2023-07-02T09:20:08,833 ############################ 2023-07-02T09:20:08,833 Python recognizes 'pyobo.apps.gilda.templates' as an importable package[^1], 2023-07-02T09:20:08,833 but it is absent from setuptools' `packages` configuration. 2023-07-02T09:20:08,834 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-02T09:20:08,834 package, please make sure that 'pyobo.apps.gilda.templates' is explicitly added 2023-07-02T09:20:08,834 to the `packages` configuration field. 2023-07-02T09:20:08,834 Alternatively, you can also rely on setuptools' discovery methods 2023-07-02T09:20:08,834 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-02T09:20:08,834 instead of `find_packages(...)`/`find:`). 2023-07-02T09:20:08,835 You can read more about "package discovery" on setuptools documentation page: 2023-07-02T09:20:08,835 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-02T09:20:08,835 If you don't want 'pyobo.apps.gilda.templates' to be distributed and are 2023-07-02T09:20:08,835 already explicitly excluding 'pyobo.apps.gilda.templates' via 2023-07-02T09:20:08,835 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-02T09:20:08,835 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-02T09:20:08,835 combination with a more fine grained `package-data` configuration. 2023-07-02T09:20:08,836 You can read more about "package data files" on setuptools documentation page: 2023-07-02T09:20:08,836 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-02T09:20:08,836 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-02T09:20:08,836 even if it does not contain any `.py` files. 2023-07-02T09:20:08,836 On the other hand, currently there is no concept of package data 2023-07-02T09:20:08,837 directory, all directories are treated like packages. 2023-07-02T09:20:08,837 ******************************************************************************** 2023-07-02T09:20:08,837 !! 2023-07-02T09:20:08,837 check.warn(importable) 2023-07-02T09:20:08,837 /tmp/pip-build-env-cxrwfp_k/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyobo.apps.mapper.templates' is absent from the `packages` configuration. 2023-07-02T09:20:08,837 !! 2023-07-02T09:20:08,838 ******************************************************************************** 2023-07-02T09:20:08,838 ############################ 2023-07-02T09:20:08,838 # Package would be ignored # 2023-07-02T09:20:08,838 ############################ 2023-07-02T09:20:08,838 Python recognizes 'pyobo.apps.mapper.templates' as an importable package[^1], 2023-07-02T09:20:08,838 but it is absent from setuptools' `packages` configuration. 2023-07-02T09:20:08,838 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-02T09:20:08,838 package, please make sure that 'pyobo.apps.mapper.templates' is explicitly added 2023-07-02T09:20:08,839 to the `packages` configuration field. 2023-07-02T09:20:08,839 Alternatively, you can also rely on setuptools' discovery methods 2023-07-02T09:20:08,839 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-02T09:20:08,839 instead of `find_packages(...)`/`find:`). 2023-07-02T09:20:08,839 You can read more about "package discovery" on setuptools documentation page: 2023-07-02T09:20:08,840 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-02T09:20:08,840 If you don't want 'pyobo.apps.mapper.templates' to be distributed and are 2023-07-02T09:20:08,840 already explicitly excluding 'pyobo.apps.mapper.templates' via 2023-07-02T09:20:08,840 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-02T09:20:08,840 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-02T09:20:08,840 combination with a more fine grained `package-data` configuration. 2023-07-02T09:20:08,841 You can read more about "package data files" on setuptools documentation page: 2023-07-02T09:20:08,841 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-02T09:20:08,841 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-02T09:20:08,841 even if it does not contain any `.py` files. 2023-07-02T09:20:08,842 On the other hand, currently there is no concept of package data 2023-07-02T09:20:08,842 directory, all directories are treated like packages. 2023-07-02T09:20:08,842 ******************************************************************************** 2023-07-02T09:20:08,842 !! 2023-07-02T09:20:08,842 check.warn(importable) 2023-07-02T09:20:08,842 copying src/pyobo/registries/metaregistry.json -> build/lib/pyobo/registries 2023-07-02T09:20:08,842 copying src/pyobo/resources/ncbitaxon.tsv.gz -> build/lib/pyobo/resources 2023-07-02T09:20:09,174 copying src/pyobo/resources/ro.tsv -> build/lib/pyobo/resources 2023-07-02T09:20:09,177 copying src/pyobo/ssg/base.html -> build/lib/pyobo/ssg 2023-07-02T09:20:09,179 copying src/pyobo/ssg/index.html -> build/lib/pyobo/ssg 2023-07-02T09:20:09,181 copying src/pyobo/ssg/term.html -> build/lib/pyobo/ssg 2023-07-02T09:20:09,183 copying src/pyobo/ssg/typedef.html -> build/lib/pyobo/ssg 2023-07-02T09:20:09,185 copying src/pyobo/sources/umls/synonym_types.tsv -> build/lib/pyobo/sources/umls 2023-07-02T09:20:09,188 creating build/lib/pyobo/apps/mapper/templates 2023-07-02T09:20:09,189 copying src/pyobo/apps/mapper/templates/base.html -> build/lib/pyobo/apps/mapper/templates 2023-07-02T09:20:09,191 copying src/pyobo/apps/mapper/templates/mapper_home.html -> build/lib/pyobo/apps/mapper/templates 2023-07-02T09:20:09,193 creating build/lib/pyobo/apps/gilda/templates 2023-07-02T09:20:09,194 copying src/pyobo/apps/gilda/templates/base.html -> build/lib/pyobo/apps/gilda/templates 2023-07-02T09:20:09,196 copying src/pyobo/apps/gilda/templates/home.html -> build/lib/pyobo/apps/gilda/templates 2023-07-02T09:20:09,198 copying src/pyobo/apps/gilda/templates/matches.html -> build/lib/pyobo/apps/gilda/templates 2023-07-02T09:20:09,227 installing to build/bdist.linux-armv7l/wheel 2023-07-02T09:20:09,228 running install 2023-07-02T09:20:09,253 running install_lib 2023-07-02T09:20:09,260 creating build/bdist.linux-armv7l 2023-07-02T09:20:09,260 creating build/bdist.linux-armv7l/wheel 2023-07-02T09:20:09,262 creating build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,263 copying build/lib/pyobo/getters.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,267 creating build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,268 copying build/lib/pyobo/sources/pathbank.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,270 copying build/lib/pyobo/sources/antibodyregistry.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,272 copying build/lib/pyobo/sources/mirbase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,275 copying build/lib/pyobo/sources/mgi.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,277 copying build/lib/pyobo/sources/itis.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,279 copying build/lib/pyobo/sources/biogrid.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,280 copying build/lib/pyobo/sources/pfam.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,282 copying build/lib/pyobo/sources/hgncgenefamily.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,284 copying build/lib/pyobo/sources/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,286 copying build/lib/pyobo/sources/drugbank.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,288 copying build/lib/pyobo/sources/slm.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,290 copying build/lib/pyobo/sources/agrovoc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,292 creating build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-07-02T09:20:09,293 copying build/lib/pyobo/sources/selventa/scomp.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-07-02T09:20:09,295 copying build/lib/pyobo/sources/selventa/sfam.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-07-02T09:20:09,297 copying build/lib/pyobo/sources/selventa/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-07-02T09:20:09,299 copying build/lib/pyobo/sources/selventa/sdis.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-07-02T09:20:09,301 copying build/lib/pyobo/sources/selventa/schem.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/selventa 2023-07-02T09:20:09,302 copying build/lib/pyobo/sources/flybase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,305 copying build/lib/pyobo/sources/cpt.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,306 copying build/lib/pyobo/sources/famplex.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,308 copying build/lib/pyobo/sources/ccle.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,310 copying build/lib/pyobo/sources/complexportal.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,312 copying build/lib/pyobo/sources/ncbigene.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,314 copying build/lib/pyobo/sources/expasy.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,317 copying build/lib/pyobo/sources/mesh.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,319 copying build/lib/pyobo/sources/drugcentral.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,322 copying build/lib/pyobo/sources/mirbase_family.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,323 copying build/lib/pyobo/sources/drugbank_salt.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,325 copying build/lib/pyobo/sources/rhea.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,327 copying build/lib/pyobo/sources/icd_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,329 copying build/lib/pyobo/sources/sgd.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,331 copying build/lib/pyobo/sources/dictybase_gene.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,332 copying build/lib/pyobo/sources/zfin.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,335 copying build/lib/pyobo/sources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,337 creating build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-07-02T09:20:09,338 copying build/lib/pyobo/sources/uniprot/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-07-02T09:20:09,340 copying build/lib/pyobo/sources/uniprot/uniprot.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-07-02T09:20:09,342 copying build/lib/pyobo/sources/uniprot/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/uniprot 2023-07-02T09:20:09,344 copying build/lib/pyobo/sources/msigdb.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,346 copying build/lib/pyobo/sources/interpro.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,349 creating build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-07-02T09:20:09,350 copying build/lib/pyobo/sources/kegg/genome.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-07-02T09:20:09,352 copying build/lib/pyobo/sources/kegg/api.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-07-02T09:20:09,354 copying build/lib/pyobo/sources/kegg/pathway.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-07-02T09:20:09,356 copying build/lib/pyobo/sources/kegg/genes.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-07-02T09:20:09,358 copying build/lib/pyobo/sources/kegg/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/kegg 2023-07-02T09:20:09,359 copying build/lib/pyobo/sources/npass.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,361 copying build/lib/pyobo/sources/chembl.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,363 copying build/lib/pyobo/sources/mirbase_constants.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,365 creating build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-07-02T09:20:09,366 copying build/lib/pyobo/sources/umls/synonym_types.tsv -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-07-02T09:20:09,369 copying build/lib/pyobo/sources/umls/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-07-02T09:20:09,370 copying build/lib/pyobo/sources/umls/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-07-02T09:20:09,372 copying build/lib/pyobo/sources/umls/umls.py -> build/bdist.linux-armv7l/wheel/pyobo/sources/umls 2023-07-02T09:20:09,374 copying build/lib/pyobo/sources/conso.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,376 copying build/lib/pyobo/sources/icd10.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,378 copying build/lib/pyobo/sources/gmt_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,380 copying build/lib/pyobo/sources/pid.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,382 copying build/lib/pyobo/sources/pubchem.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,384 copying build/lib/pyobo/sources/wikipathways.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,386 copying build/lib/pyobo/sources/pombase.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,388 copying build/lib/pyobo/sources/pfam_clan.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,389 copying build/lib/pyobo/sources/hgnc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,392 copying build/lib/pyobo/sources/reactome.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,394 copying build/lib/pyobo/sources/cvx.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,396 copying build/lib/pyobo/sources/gwascentral_phenotype.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,398 copying build/lib/pyobo/sources/depmap.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,400 copying build/lib/pyobo/sources/chebi.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,402 copying build/lib/pyobo/sources/go.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,404 copying build/lib/pyobo/sources/icd11.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,406 copying build/lib/pyobo/sources/cgnc.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,407 copying build/lib/pyobo/sources/gwascentral_study.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,409 copying build/lib/pyobo/sources/mirbase_mature.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,411 copying build/lib/pyobo/sources/rgd.py -> build/bdist.linux-armv7l/wheel/pyobo/sources 2023-07-02T09:20:09,414 creating build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-07-02T09:20:09,416 creating build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,417 copying build/lib/pyobo/xrefdb/sources/biomappings.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,419 copying build/lib/pyobo/xrefdb/sources/cbms2019.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,421 copying build/lib/pyobo/xrefdb/sources/wikidata.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,423 copying build/lib/pyobo/xrefdb/sources/ncit.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,424 copying build/lib/pyobo/xrefdb/sources/famplex.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,426 copying build/lib/pyobo/xrefdb/sources/intact.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,428 copying build/lib/pyobo/xrefdb/sources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,430 copying build/lib/pyobo/xrefdb/sources/compath.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,432 copying build/lib/pyobo/xrefdb/sources/chembl.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,434 copying build/lib/pyobo/xrefdb/sources/pubchem.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,436 copying build/lib/pyobo/xrefdb/sources/gilda.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb/sources 2023-07-02T09:20:09,437 copying build/lib/pyobo/xrefdb/priority.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-07-02T09:20:09,439 copying build/lib/pyobo/xrefdb/xrefs_pipeline.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-07-02T09:20:09,442 copying build/lib/pyobo/xrefdb/bengo.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-07-02T09:20:09,443 copying build/lib/pyobo/xrefdb/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-07-02T09:20:09,445 copying build/lib/pyobo/xrefdb/canonicalizer.py -> build/bdist.linux-armv7l/wheel/pyobo/xrefdb 2023-07-02T09:20:09,448 creating build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,449 copying build/lib/pyobo/cli/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,451 copying build/lib/pyobo/cli/lookup.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,453 copying build/lib/pyobo/cli/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,455 copying build/lib/pyobo/cli/aws.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,456 copying build/lib/pyobo/cli/database.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,459 copying build/lib/pyobo/cli/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/cli 2023-07-02T09:20:09,461 creating build/bdist.linux-armv7l/wheel/pyobo/registries 2023-07-02T09:20:09,462 copying build/lib/pyobo/registries/metaregistry.py -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-07-02T09:20:09,464 copying build/lib/pyobo/registries/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-07-02T09:20:09,466 copying build/lib/pyobo/registries/metaregistry.json -> build/bdist.linux-armv7l/wheel/pyobo/registries 2023-07-02T09:20:09,468 copying build/lib/pyobo/constants.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,470 copying build/lib/pyobo/obographs.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,473 creating build/bdist.linux-armv7l/wheel/pyobo/resources 2023-07-02T09:20:09,473 copying build/lib/pyobo/resources/ncbitaxon.tsv.gz -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-07-02T09:20:09,798 copying build/lib/pyobo/resources/ncbitaxon.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-07-02T09:20:09,801 copying build/lib/pyobo/resources/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-07-02T09:20:09,803 copying build/lib/pyobo/resources/ro.tsv -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-07-02T09:20:09,805 copying build/lib/pyobo/resources/ro.py -> build/bdist.linux-armv7l/wheel/pyobo/resources 2023-07-02T09:20:09,807 copying build/lib/pyobo/aws.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,810 creating build/bdist.linux-armv7l/wheel/pyobo/apps 2023-07-02T09:20:09,811 copying build/lib/pyobo/apps/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps 2023-07-02T09:20:09,814 creating build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-07-02T09:20:09,815 copying build/lib/pyobo/apps/mapper/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-07-02T09:20:09,817 copying build/lib/pyobo/apps/mapper/mapper.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-07-02T09:20:09,819 copying build/lib/pyobo/apps/mapper/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-07-02T09:20:09,820 copying build/lib/pyobo/apps/mapper/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper 2023-07-02T09:20:09,823 creating build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-07-02T09:20:09,824 copying build/lib/pyobo/apps/mapper/templates/mapper_home.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-07-02T09:20:09,826 copying build/lib/pyobo/apps/mapper/templates/base.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/mapper/templates 2023-07-02T09:20:09,828 copying build/lib/pyobo/apps/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps 2023-07-02T09:20:09,830 creating build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-07-02T09:20:09,831 copying build/lib/pyobo/apps/gilda/cli.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-07-02T09:20:09,833 copying build/lib/pyobo/apps/gilda/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-07-02T09:20:09,835 copying build/lib/pyobo/apps/gilda/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-07-02T09:20:09,836 copying build/lib/pyobo/apps/gilda/app.py -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda 2023-07-02T09:20:09,838 creating build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-07-02T09:20:09,839 copying build/lib/pyobo/apps/gilda/templates/home.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-07-02T09:20:09,841 copying build/lib/pyobo/apps/gilda/templates/base.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-07-02T09:20:09,843 copying build/lib/pyobo/apps/gilda/templates/matches.html -> build/bdist.linux-armv7l/wheel/pyobo/apps/gilda/templates 2023-07-02T09:20:09,845 creating build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,846 copying build/lib/pyobo/utils/misc.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,849 copying build/lib/pyobo/utils/path.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,851 copying build/lib/pyobo/utils/cache.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,853 copying build/lib/pyobo/utils/iter.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,854 copying build/lib/pyobo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,856 copying build/lib/pyobo/utils/io.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,858 copying build/lib/pyobo/utils/ndex_utils.py -> build/bdist.linux-armv7l/wheel/pyobo/utils 2023-07-02T09:20:09,861 creating build/bdist.linux-armv7l/wheel/pyobo/struct 2023-07-02T09:20:09,862 copying build/lib/pyobo/struct/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-07-02T09:20:09,864 copying build/lib/pyobo/struct/reference.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-07-02T09:20:09,866 copying build/lib/pyobo/struct/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-07-02T09:20:09,868 copying build/lib/pyobo/struct/struct.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-07-02T09:20:09,871 copying build/lib/pyobo/struct/typedef.py -> build/bdist.linux-armv7l/wheel/pyobo/struct 2023-07-02T09:20:09,874 copying build/lib/pyobo/__main__.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,876 creating build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-07-02T09:20:09,877 copying build/lib/pyobo/ssg/index.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-07-02T09:20:09,879 copying build/lib/pyobo/ssg/base.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-07-02T09:20:09,880 copying build/lib/pyobo/ssg/typedef.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-07-02T09:20:09,882 copying build/lib/pyobo/ssg/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-07-02T09:20:09,884 copying build/lib/pyobo/ssg/term.html -> build/bdist.linux-armv7l/wheel/pyobo/ssg 2023-07-02T09:20:09,886 copying build/lib/pyobo/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,888 creating build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,889 copying build/lib/pyobo/api/typedefs.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,891 copying build/lib/pyobo/api/utils.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,893 copying build/lib/pyobo/api/relations.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,896 copying build/lib/pyobo/api/species.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,897 copying build/lib/pyobo/api/metadata.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,899 copying build/lib/pyobo/api/__init__.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,901 copying build/lib/pyobo/api/properties.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,903 copying build/lib/pyobo/api/names.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,905 copying build/lib/pyobo/api/hierarchy.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,908 copying build/lib/pyobo/api/alts.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,909 copying build/lib/pyobo/api/xrefs.py -> build/bdist.linux-armv7l/wheel/pyobo/api 2023-07-02T09:20:09,912 copying build/lib/pyobo/version.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,913 copying build/lib/pyobo/identifier_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,915 copying build/lib/pyobo/resource_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,917 copying build/lib/pyobo/gilda_utils.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,919 copying build/lib/pyobo/reader.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,922 copying build/lib/pyobo/plugins.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,923 copying build/lib/pyobo/normalizer.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,925 copying build/lib/pyobo/mocks.py -> build/bdist.linux-armv7l/wheel/pyobo 2023-07-02T09:20:09,927 running install_egg_info 2023-07-02T09:20:09,938 Copying src/pyobo.egg-info to build/bdist.linux-armv7l/wheel/pyobo-0.9.1-py3.9.egg-info 2023-07-02T09:20:09,952 running install_scripts 2023-07-02T09:20:09,980 creating build/bdist.linux-armv7l/wheel/pyobo-0.9.1.dist-info/WHEEL 2023-07-02T09:20:09,982 creating '/tmp/pip-wheel-beeahjgp/.tmp-7qujuw8y/pyobo-0.9.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-02T09:20:09,985 adding 'pyobo/__init__.py' 2023-07-02T09:20:09,986 adding 'pyobo/__main__.py' 2023-07-02T09:20:09,988 adding 'pyobo/aws.py' 2023-07-02T09:20:09,989 adding 'pyobo/constants.py' 2023-07-02T09:20:09,991 adding 'pyobo/getters.py' 2023-07-02T09:20:09,993 adding 'pyobo/gilda_utils.py' 2023-07-02T09:20:09,995 adding 'pyobo/identifier_utils.py' 2023-07-02T09:20:09,996 adding 'pyobo/mocks.py' 2023-07-02T09:20:09,998 adding 'pyobo/normalizer.py' 2023-07-02T09:20:10,000 adding 'pyobo/obographs.py' 2023-07-02T09:20:10,001 adding 'pyobo/plugins.py' 2023-07-02T09:20:10,004 adding 'pyobo/reader.py' 2023-07-02T09:20:10,005 adding 'pyobo/resource_utils.py' 2023-07-02T09:20:10,007 adding 'pyobo/version.py' 2023-07-02T09:20:10,009 adding 'pyobo/api/__init__.py' 2023-07-02T09:20:10,010 adding 'pyobo/api/alts.py' 2023-07-02T09:20:10,012 adding 'pyobo/api/hierarchy.py' 2023-07-02T09:20:10,013 adding 'pyobo/api/metadata.py' 2023-07-02T09:20:10,015 adding 'pyobo/api/names.py' 2023-07-02T09:20:10,016 adding 'pyobo/api/properties.py' 2023-07-02T09:20:10,018 adding 'pyobo/api/relations.py' 2023-07-02T09:20:10,019 adding 'pyobo/api/species.py' 2023-07-02T09:20:10,020 adding 'pyobo/api/typedefs.py' 2023-07-02T09:20:10,022 adding 'pyobo/api/utils.py' 2023-07-02T09:20:10,023 adding 'pyobo/api/xrefs.py' 2023-07-02T09:20:10,025 adding 'pyobo/apps/__init__.py' 2023-07-02T09:20:10,026 adding 'pyobo/apps/cli.py' 2023-07-02T09:20:10,028 adding 'pyobo/apps/gilda/__init__.py' 2023-07-02T09:20:10,029 adding 'pyobo/apps/gilda/__main__.py' 2023-07-02T09:20:10,030 adding 'pyobo/apps/gilda/app.py' 2023-07-02T09:20:10,031 adding 'pyobo/apps/gilda/cli.py' 2023-07-02T09:20:10,033 adding 'pyobo/apps/gilda/templates/base.html' 2023-07-02T09:20:10,034 adding 'pyobo/apps/gilda/templates/home.html' 2023-07-02T09:20:10,035 adding 'pyobo/apps/gilda/templates/matches.html' 2023-07-02T09:20:10,037 adding 'pyobo/apps/mapper/__init__.py' 2023-07-02T09:20:10,038 adding 'pyobo/apps/mapper/__main__.py' 2023-07-02T09:20:10,039 adding 'pyobo/apps/mapper/cli.py' 2023-07-02T09:20:10,041 adding 'pyobo/apps/mapper/mapper.py' 2023-07-02T09:20:10,043 adding 'pyobo/apps/mapper/templates/base.html' 2023-07-02T09:20:10,044 adding 'pyobo/apps/mapper/templates/mapper_home.html' 2023-07-02T09:20:10,046 adding 'pyobo/cli/__init__.py' 2023-07-02T09:20:10,047 adding 'pyobo/cli/aws.py' 2023-07-02T09:20:10,048 adding 'pyobo/cli/cli.py' 2023-07-02T09:20:10,050 adding 'pyobo/cli/database.py' 2023-07-02T09:20:10,052 adding 'pyobo/cli/lookup.py' 2023-07-02T09:20:10,053 adding 'pyobo/cli/utils.py' 2023-07-02T09:20:10,055 adding 'pyobo/registries/__init__.py' 2023-07-02T09:20:10,057 adding 'pyobo/registries/metaregistry.json' 2023-07-02T09:20:10,059 adding 'pyobo/registries/metaregistry.py' 2023-07-02T09:20:10,061 adding 'pyobo/resources/__init__.py' 2023-07-02T09:20:10,062 adding 'pyobo/resources/ncbitaxon.py' 2023-07-02T09:20:12,666 adding 'pyobo/resources/ncbitaxon.tsv.gz' 2023-07-02T09:20:12,808 adding 'pyobo/resources/ro.py' 2023-07-02T09:20:12,811 adding 'pyobo/resources/ro.tsv' 2023-07-02T09:20:12,814 adding 'pyobo/sources/__init__.py' 2023-07-02T09:20:12,816 adding 'pyobo/sources/agrovoc.py' 2023-07-02T09:20:12,817 adding 'pyobo/sources/antibodyregistry.py' 2023-07-02T09:20:12,818 adding 'pyobo/sources/biogrid.py' 2023-07-02T09:20:12,820 adding 'pyobo/sources/ccle.py' 2023-07-02T09:20:12,821 adding 'pyobo/sources/cgnc.py' 2023-07-02T09:20:12,822 adding 'pyobo/sources/chebi.py' 2023-07-02T09:20:12,824 adding 'pyobo/sources/chembl.py' 2023-07-02T09:20:12,825 adding 'pyobo/sources/complexportal.py' 2023-07-02T09:20:12,827 adding 'pyobo/sources/conso.py' 2023-07-02T09:20:12,828 adding 'pyobo/sources/cpt.py' 2023-07-02T09:20:12,830 adding 'pyobo/sources/cvx.py' 2023-07-02T09:20:12,831 adding 'pyobo/sources/depmap.py' 2023-07-02T09:20:12,833 adding 'pyobo/sources/dictybase_gene.py' 2023-07-02T09:20:12,834 adding 'pyobo/sources/drugbank.py' 2023-07-02T09:20:12,836 adding 'pyobo/sources/drugbank_salt.py' 2023-07-02T09:20:12,837 adding 'pyobo/sources/drugcentral.py' 2023-07-02T09:20:12,839 adding 'pyobo/sources/expasy.py' 2023-07-02T09:20:12,841 adding 'pyobo/sources/famplex.py' 2023-07-02T09:20:12,842 adding 'pyobo/sources/flybase.py' 2023-07-02T09:20:12,844 adding 'pyobo/sources/gmt_utils.py' 2023-07-02T09:20:12,845 adding 'pyobo/sources/go.py' 2023-07-02T09:20:12,846 adding 'pyobo/sources/gwascentral_phenotype.py' 2023-07-02T09:20:12,848 adding 'pyobo/sources/gwascentral_study.py' 2023-07-02T09:20:12,850 adding 'pyobo/sources/hgnc.py' 2023-07-02T09:20:12,851 adding 'pyobo/sources/hgncgenefamily.py' 2023-07-02T09:20:12,853 adding 'pyobo/sources/icd10.py' 2023-07-02T09:20:12,854 adding 'pyobo/sources/icd11.py' 2023-07-02T09:20:12,856 adding 'pyobo/sources/icd_utils.py' 2023-07-02T09:20:12,857 adding 'pyobo/sources/interpro.py' 2023-07-02T09:20:12,859 adding 'pyobo/sources/itis.py' 2023-07-02T09:20:12,860 adding 'pyobo/sources/mesh.py' 2023-07-02T09:20:12,862 adding 'pyobo/sources/mgi.py' 2023-07-02T09:20:12,864 adding 'pyobo/sources/mirbase.py' 2023-07-02T09:20:12,865 adding 'pyobo/sources/mirbase_constants.py' 2023-07-02T09:20:12,866 adding 'pyobo/sources/mirbase_family.py' 2023-07-02T09:20:12,868 adding 'pyobo/sources/mirbase_mature.py' 2023-07-02T09:20:12,869 adding 'pyobo/sources/msigdb.py' 2023-07-02T09:20:12,871 adding 'pyobo/sources/ncbigene.py' 2023-07-02T09:20:12,872 adding 'pyobo/sources/npass.py' 2023-07-02T09:20:12,874 adding 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2023-07-02T09:20:12,923 adding 'pyobo/ssg/index.html' 2023-07-02T09:20:12,925 adding 'pyobo/ssg/term.html' 2023-07-02T09:20:12,926 adding 'pyobo/ssg/typedef.html' 2023-07-02T09:20:12,928 adding 'pyobo/struct/__init__.py' 2023-07-02T09:20:12,929 adding 'pyobo/struct/reference.py' 2023-07-02T09:20:12,935 adding 'pyobo/struct/struct.py' 2023-07-02T09:20:12,937 adding 'pyobo/struct/typedef.py' 2023-07-02T09:20:12,938 adding 'pyobo/struct/utils.py' 2023-07-02T09:20:12,940 adding 'pyobo/utils/__init__.py' 2023-07-02T09:20:12,941 adding 'pyobo/utils/cache.py' 2023-07-02T09:20:12,943 adding 'pyobo/utils/io.py' 2023-07-02T09:20:12,944 adding 'pyobo/utils/iter.py' 2023-07-02T09:20:12,945 adding 'pyobo/utils/misc.py' 2023-07-02T09:20:12,947 adding 'pyobo/utils/ndex_utils.py' 2023-07-02T09:20:12,948 adding 'pyobo/utils/path.py' 2023-07-02T09:20:12,950 adding 'pyobo/xrefdb/__init__.py' 2023-07-02T09:20:12,951 adding 'pyobo/xrefdb/bengo.py' 2023-07-02T09:20:12,953 adding 'pyobo/xrefdb/canonicalizer.py' 2023-07-02T09:20:12,954 adding 'pyobo/xrefdb/priority.py' 2023-07-02T09:20:12,956 adding 'pyobo/xrefdb/xrefs_pipeline.py' 2023-07-02T09:20:12,957 adding 'pyobo/xrefdb/sources/__init__.py' 2023-07-02T09:20:12,959 adding 'pyobo/xrefdb/sources/biomappings.py' 2023-07-02T09:20:12,960 adding 'pyobo/xrefdb/sources/cbms2019.py' 2023-07-02T09:20:12,961 adding 'pyobo/xrefdb/sources/chembl.py' 2023-07-02T09:20:12,963 adding 'pyobo/xrefdb/sources/compath.py' 2023-07-02T09:20:12,964 adding 'pyobo/xrefdb/sources/famplex.py' 2023-07-02T09:20:12,965 adding 'pyobo/xrefdb/sources/gilda.py' 2023-07-02T09:20:12,966 adding 'pyobo/xrefdb/sources/intact.py' 2023-07-02T09:20:12,968 adding 'pyobo/xrefdb/sources/ncit.py' 2023-07-02T09:20:12,969 adding 'pyobo/xrefdb/sources/pubchem.py' 2023-07-02T09:20:12,970 adding 'pyobo/xrefdb/sources/wikidata.py' 2023-07-02T09:20:12,973 adding 'pyobo-0.9.1.dist-info/LICENSE' 2023-07-02T09:20:12,975 adding 'pyobo-0.9.1.dist-info/METADATA' 2023-07-02T09:20:12,976 adding 'pyobo-0.9.1.dist-info/WHEEL' 2023-07-02T09:20:12,977 adding 'pyobo-0.9.1.dist-info/entry_points.txt' 2023-07-02T09:20:12,978 adding 'pyobo-0.9.1.dist-info/top_level.txt' 2023-07-02T09:20:12,981 adding 'pyobo-0.9.1.dist-info/RECORD' 2023-07-02T09:20:13,220 removing build/bdist.linux-armv7l/wheel 2023-07-02T09:20:13,350 Building wheel for pyobo (pyproject.toml): finished with status 'done' 2023-07-02T09:20:13,866 Created wheel for pyobo: filename=pyobo-0.9.1-py3-none-any.whl size=23092635 sha256=c1b5db0545e33b8f3c3d01aff71d9017979a650c155bd5ad97baea6ca8c68122 2023-07-02T09:20:13,867 Stored in directory: /tmp/pip-ephem-wheel-cache-tpfputr1/wheels/65/e8/a9/922750a200e6b275b95a0577119a6b6ef3b6c4399cfea3db8c 2023-07-02T09:20:13,893 Successfully built pyobo 2023-07-02T09:20:14,437 Removed build tracker: '/tmp/pip-build-tracker-ta3uvvv2'