2023-07-04T22:13:17,844 Created temporary directory: /tmp/pip-build-tracker-q_ungwnl 2023-07-04T22:13:17,847 Initialized build tracking at /tmp/pip-build-tracker-q_ungwnl 2023-07-04T22:13:17,847 Created build tracker: /tmp/pip-build-tracker-q_ungwnl 2023-07-04T22:13:17,848 Entered build tracker: /tmp/pip-build-tracker-q_ungwnl 2023-07-04T22:13:17,849 Created temporary directory: /tmp/pip-wheel-91zf24sk 2023-07-04T22:13:17,857 Created temporary directory: /tmp/pip-ephem-wheel-cache-d5y57irs 2023-07-04T22:13:17,909 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-04T22:13:17,917 2 location(s) to search for versions of gffutils: 2023-07-04T22:13:17,917 * https://pypi.org/simple/gffutils/ 2023-07-04T22:13:17,917 * https://www.piwheels.org/simple/gffutils/ 2023-07-04T22:13:17,918 Fetching project page and analyzing links: https://pypi.org/simple/gffutils/ 2023-07-04T22:13:17,919 Getting page https://pypi.org/simple/gffutils/ 2023-07-04T22:13:17,923 Found index url https://pypi.org/simple/ 2023-07-04T22:13:18,118 Fetched page https://pypi.org/simple/gffutils/ as application/vnd.pypi.simple.v1+json 2023-07-04T22:13:18,129 Found link https://files.pythonhosted.org/packages/d9/a5/3d6f46b049c1091efcc6f6d29e9d39470f5f8d62e17cdb6fd331526fd71b/gffutils-0.0.0.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.0.0 2023-07-04T22:13:18,130 Found link https://files.pythonhosted.org/packages/86/64/6dab23af4bfb4052c66a8f1f174c95d59f8e797220bfe19dfd11122538d9/gffutils-0.7.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.7 2023-07-04T22:13:18,131 Found link https://files.pythonhosted.org/packages/f9/6a/b2cf512d0772c220431fbab8465abdb2d730bd6ac22a6816e023afa675b8/gffutils-0.8.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8 2023-07-04T22:13:18,131 Found link https://files.pythonhosted.org/packages/07/52/5d10ce38562ed0b8468697e09f8898b45df543d5e9fe5b6c5a4a5aca6685/gffutils-0.8.1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.1 2023-07-04T22:13:18,132 Found link https://files.pythonhosted.org/packages/eb/89/e2e0c90b9be07b3ab650b7474971fbf0b1e5d4d29a2b03c676ffad9501bb/gffutils-0.8.2.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.2 2023-07-04T22:13:18,133 Found link https://files.pythonhosted.org/packages/3e/2b/1a5d72b043c024b86d573ceab15b464acd0638b912cd30ddce71e7d93112/gffutils-0.8.3.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.3 2023-07-04T22:13:18,133 Found link https://files.pythonhosted.org/packages/8d/00/6f4f59d109bbc421ad59faf64eb31cb90858a4a316c31eb49e09467f4a93/gffutils-0.8.3.1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.3.1 2023-07-04T22:13:18,134 Found link https://files.pythonhosted.org/packages/d8/a3/487db49cf8b35dd17d6360f464d3524b369365e5bd7964ac32b33a6fabab/gffutils-0.8.4rc1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.4rc1 2023-07-04T22:13:18,135 Found link https://files.pythonhosted.org/packages/25/9d/97c58a9a602e41e2797747fd94b6bd4aa82331178a074c4da966030045ba/gffutils-0.8.5.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.5 2023-07-04T22:13:18,136 Found link https://files.pythonhosted.org/packages/21/b1/0ecce3b0304048241da7e830196aa50d62dfe9c9bdbf4fb48aebbf1d363e/gffutils-0.8.6.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.6 2023-07-04T22:13:18,136 Found link https://files.pythonhosted.org/packages/40/bc/85541d291c6da6570deed2988206bb322afb8d5ede1e72fd267c440a286d/gffutils-0.8.6.1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.6.1 2023-07-04T22:13:18,137 Found link https://files.pythonhosted.org/packages/d8/bf/b630f9a006d7380d79b344b41af548c73371844737f221a9d4a59d57f91e/gffutils-0.8.7.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.7 2023-07-04T22:13:18,138 Found link https://files.pythonhosted.org/packages/a7/fa/3d8cd13f58540098f5efb3ec7dd33d1bb6a27ee06e377e1d6a2419b4be25/gffutils-0.8.7.1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.8.7.1 2023-07-04T22:13:18,138 Found link https://files.pythonhosted.org/packages/b4/ea/54ca403a8d471849606fb432b9afcf73c8c5105ea2dd87b8d38bd5217c5a/gffutils-0.9.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.9 2023-07-04T22:13:18,139 Found link https://files.pythonhosted.org/packages/f0/cb/bbbde7e179aa5efe13f51afbef13a85a53632d94fc97755a2819d4d251c6/gffutils-0.10.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.10 2023-07-04T22:13:18,140 Found link https://files.pythonhosted.org/packages/87/d6/f893f14fd6cf1c9e758259f6e0f9ba1ae03370988d8f1a3ea8d790ca5b06/gffutils-0.10.1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.10.1 2023-07-04T22:13:18,140 Found link https://files.pythonhosted.org/packages/eb/38/8f8f917d37175dea194c12d7c625d82e0b039169afe5c08f3609fbef5f9c/gffutils-0.11.0.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.11.0 2023-07-04T22:13:18,141 Found link https://files.pythonhosted.org/packages/41/5e/e55e6b0e13467b73680ee8206082294366e0bf194726ee6923517886145a/gffutils-0.11.1.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.11.1 2023-07-04T22:13:18,142 Skipping link: No binaries permitted for gffutils: https://files.pythonhosted.org/packages/b2/0a/eddd2f6667198100adb8fa6f983db66022e3c375c40d19795a3de05df986/gffutils-0.12-py3-none-any.whl (from https://pypi.org/simple/gffutils/) 2023-07-04T22:13:18,142 Found link https://files.pythonhosted.org/packages/94/8a/692d9022dc2edbfd3aa3d1b82924d7743c62dcfda2b800d4caf948fdc78c/gffutils-0.12.tar.gz (from https://pypi.org/simple/gffutils/), version: 0.12 2023-07-04T22:13:18,143 Fetching project page and analyzing links: https://www.piwheels.org/simple/gffutils/ 2023-07-04T22:13:18,144 Getting page https://www.piwheels.org/simple/gffutils/ 2023-07-04T22:13:18,146 Found index url https://www.piwheels.org/simple/ 2023-07-04T22:13:18,360 Fetched page https://www.piwheels.org/simple/gffutils/ as text/html 2023-07-04T22:13:18,372 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.11.1-py3-none-any.whl#sha256=4cc48c421d677ade7419a12cf3d970d2d3be2891fa35fa5b3a54c5f97dbb037d (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,373 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.11.0-py3-none-any.whl#sha256=17cb6c18791ad6fac6a243fdacad9c551cd32d03d07717e740048b9e3c04d901 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,374 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.10.1-py3-none-any.whl#sha256=5ef49126fc2ce3888acab72b8de390a1851ee39c7e97c44e04a3bd67c2d785cb (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,374 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.10-py3-none-any.whl#sha256=a0a5c59b160c35349aa71feadf2a5bd0f82acf3372cc5f137077c3d94babb938 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,375 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.9-py3-none-any.whl#sha256=467fd84f30d0f2fca1ef1197c9794c050ca041b3c89fc2f717ff1b775ee263c7 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,375 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.7.1-py3-none-any.whl#sha256=9373da862b66f89436246505d76107af3bdbbbe208bd387558c982cab9bb7a44 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,376 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.7-py3-none-any.whl#sha256=4bee88653f846fd491426bc5b4474b346233c8224cf084be5e088b80a3e20864 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,376 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.6.1-py3-none-any.whl#sha256=8dfce15146e0d0ae1ee7353676caa181d8728b9b2b6c53f9738ff539ba96e12e (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,377 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.6-py3-none-any.whl#sha256=fb0b3a2418537eacfd289c93c9e1f97e0179a43d1fefdcb26fa7074a236665f9 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,377 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.5-py3-none-any.whl#sha256=efae4ef85e8f8d071bf4cdec1447ce2fac13c6453594d39c29aa351f90af43ab (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,378 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.4rc1-py3-none-any.whl#sha256=f5b02338e4b604e57f22582da42962d0e7d27f792e591c306530d116d2c1b7a4 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,378 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.3.1-py3-none-any.whl#sha256=f9c7e10bac2007279e1fc859269bf697895138b08cd273a688044d6cc8d9e428 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,379 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.3-py3-none-any.whl#sha256=1ceff7023c903f5e86de91e0c4ec4680ef3e7bef5547c96af0636f144f435c3d (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,380 Skipping link: No binaries permitted for gffutils: https://www.piwheels.org/simple/gffutils/gffutils-0.8.2-py3-none-any.whl#sha256=948a8856b9496f8a82cfa9fd9210b9ce6956396536fc506a67f84586faf94ce9 (from https://www.piwheels.org/simple/gffutils/) 2023-07-04T22:13:18,380 Skipping link: not a file: https://www.piwheels.org/simple/gffutils/ 2023-07-04T22:13:18,381 Skipping link: not a file: https://pypi.org/simple/gffutils/ 2023-07-04T22:13:18,420 Given no hashes to check 1 links for project 'gffutils': discarding no candidates 2023-07-04T22:13:18,455 Collecting gffutils==0.12 2023-07-04T22:13:18,460 Created temporary directory: /tmp/pip-unpack-4cfhtdqo 2023-07-04T22:13:18,837 Downloading gffutils-0.12.tar.gz (1.6 MB) 2023-07-04T22:13:20,605 Added gffutils==0.12 from https://files.pythonhosted.org/packages/94/8a/692d9022dc2edbfd3aa3d1b82924d7743c62dcfda2b800d4caf948fdc78c/gffutils-0.12.tar.gz to build tracker '/tmp/pip-build-tracker-q_ungwnl' 2023-07-04T22:13:20,610 Running setup.py (path:/tmp/pip-wheel-91zf24sk/gffutils_28f1b94ff65a4d0da5186946ad3c947c/setup.py) egg_info for package gffutils 2023-07-04T22:13:20,611 Created temporary directory: /tmp/pip-pip-egg-info-7xoaobp4 2023-07-04T22:13:20,612 Preparing metadata (setup.py): started 2023-07-04T22:13:20,614 Running command python setup.py egg_info 2023-07-04T22:13:22,174 running egg_info 2023-07-04T22:13:22,178 creating /tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info 2023-07-04T22:13:22,245 writing /tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/PKG-INFO 2023-07-04T22:13:22,251 writing dependency_links to /tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/dependency_links.txt 2023-07-04T22:13:22,256 writing requirements to /tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/requires.txt 2023-07-04T22:13:22,259 writing top-level names to /tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/top_level.txt 2023-07-04T22:13:22,263 writing manifest file '/tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/SOURCES.txt' 2023-07-04T22:13:22,566 reading manifest file '/tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/SOURCES.txt' 2023-07-04T22:13:22,569 reading manifest template 'MANIFEST.in' 2023-07-04T22:13:22,572 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:520: InformationOnly: Normalizing ' 0.12' to '0.12' 2023-07-04T22:13:22,573 self._validate_version(self.metadata.version) 2023-07-04T22:13:22,573 warning: no files found matching '*.rst' under directory 'docs/source' 2023-07-04T22:13:22,574 warning: no files found matching '*.py' under directory 'docs/source' 2023-07-04T22:13:22,574 warning: no files found matching '*' under directory 'docs/source/images' 2023-07-04T22:13:22,577 warning: no files found matching 'docs/Makefile' 2023-07-04T22:13:22,577 warning: no files found matching 'docs/make.bat' 2023-07-04T22:13:22,581 warning: no files found matching 'gffutils/test/data/__init__.py' 2023-07-04T22:13:22,584 warning: no files found matching 'gffutils/test/data/t.py' 2023-07-04T22:13:22,585 adding license file 'LICENSE' 2023-07-04T22:13:22,597 writing manifest file '/tmp/pip-pip-egg-info-7xoaobp4/gffutils.egg-info/SOURCES.txt' 2023-07-04T22:13:22,718 Preparing metadata (setup.py): finished with status 'done' 2023-07-04T22:13:22,732 Source in /tmp/pip-wheel-91zf24sk/gffutils_28f1b94ff65a4d0da5186946ad3c947c has version 0.12, which satisfies requirement gffutils==0.12 from https://files.pythonhosted.org/packages/94/8a/692d9022dc2edbfd3aa3d1b82924d7743c62dcfda2b800d4caf948fdc78c/gffutils-0.12.tar.gz 2023-07-04T22:13:22,734 Removed gffutils==0.12 from https://files.pythonhosted.org/packages/94/8a/692d9022dc2edbfd3aa3d1b82924d7743c62dcfda2b800d4caf948fdc78c/gffutils-0.12.tar.gz from build tracker '/tmp/pip-build-tracker-q_ungwnl' 2023-07-04T22:13:22,745 Created temporary directory: /tmp/pip-unpack-tzur74dc 2023-07-04T22:13:22,746 Building wheels for collected packages: gffutils 2023-07-04T22:13:22,756 Created temporary directory: /tmp/pip-wheel-sqvfm0m3 2023-07-04T22:13:22,756 Building wheel for gffutils (setup.py): started 2023-07-04T22:13:22,759 Destination directory: /tmp/pip-wheel-sqvfm0m3 2023-07-04T22:13:22,759 Running command python setup.py bdist_wheel 2023-07-04T22:13:24,129 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:520: InformationOnly: Normalizing ' 0.12' to '0.12' 2023-07-04T22:13:24,130 self._validate_version(self.metadata.version) 2023-07-04T22:13:24,324 running bdist_wheel 2023-07-04T22:13:25,037 running build 2023-07-04T22:13:25,038 running build_py 2023-07-04T22:13:25,110 creating build 2023-07-04T22:13:25,111 creating build/lib 2023-07-04T22:13:25,112 creating build/lib/gffutils 2023-07-04T22:13:25,114 copying gffutils/inspect.py -> build/lib/gffutils 2023-07-04T22:13:25,118 copying gffutils/create.py -> build/lib/gffutils 2023-07-04T22:13:25,126 copying gffutils/convert.py -> build/lib/gffutils 2023-07-04T22:13:25,129 copying gffutils/pybedtools_integration.py -> build/lib/gffutils 2023-07-04T22:13:25,133 copying gffutils/feature.py -> build/lib/gffutils 2023-07-04T22:13:25,138 copying gffutils/merge_criteria.py -> build/lib/gffutils 2023-07-04T22:13:25,141 copying gffutils/version.py -> build/lib/gffutils 2023-07-04T22:13:25,144 copying gffutils/__init__.py -> build/lib/gffutils 2023-07-04T22:13:25,148 copying gffutils/parser.py -> build/lib/gffutils 2023-07-04T22:13:25,152 copying gffutils/exceptions.py -> build/lib/gffutils 2023-07-04T22:13:25,155 copying gffutils/iterators.py -> build/lib/gffutils 2023-07-04T22:13:25,159 copying gffutils/interface.py -> build/lib/gffutils 2023-07-04T22:13:25,166 copying gffutils/helpers.py -> build/lib/gffutils 2023-07-04T22:13:25,171 copying gffutils/attributes.py -> build/lib/gffutils 2023-07-04T22:13:25,174 copying gffutils/gffwriter.py -> build/lib/gffutils 2023-07-04T22:13:25,178 copying gffutils/biopython_integration.py -> build/lib/gffutils 2023-07-04T22:13:25,181 copying gffutils/bins.py -> build/lib/gffutils 2023-07-04T22:13:25,185 copying gffutils/constants.py -> build/lib/gffutils 2023-07-04T22:13:25,190 creating build/lib/gffutils/scripts 2023-07-04T22:13:25,191 copying gffutils/scripts/gffutils-flybase-convert.py -> build/lib/gffutils/scripts 2023-07-04T22:13:25,198 creating build/lib/gffutils/test 2023-07-04T22:13:25,199 copying gffutils/test/feature_test.py -> build/lib/gffutils/test 2023-07-04T22:13:25,204 copying gffutils/test/synth_test_base.py -> build/lib/gffutils/test 2023-07-04T22:13:25,207 copying gffutils/test/parser_test.py -> build/lib/gffutils/test 2023-07-04T22:13:25,211 copying gffutils/test/performance_evaluation.py -> build/lib/gffutils/test 2023-07-04T22:13:25,215 copying gffutils/test/__init__.py -> build/lib/gffutils/test 2023-07-04T22:13:25,218 copying gffutils/test/test_merge.py -> build/lib/gffutils/test 2023-07-04T22:13:25,222 copying gffutils/test/expected.py -> build/lib/gffutils/test 2023-07-04T22:13:25,226 copying gffutils/test/test_1.py -> build/lib/gffutils/test 2023-07-04T22:13:25,232 copying gffutils/test/conftest.py -> build/lib/gffutils/test 2023-07-04T22:13:25,235 copying gffutils/test/test_issues.py -> build/lib/gffutils/test 2023-07-04T22:13:25,240 copying gffutils/test/test_biopython_integration.py -> build/lib/gffutils/test 2023-07-04T22:13:25,243 copying gffutils/test/attr_test_cases.py -> build/lib/gffutils/test 2023-07-04T22:13:25,247 copying gffutils/test/test_merge_all.py -> build/lib/gffutils/test 2023-07-04T22:13:25,250 copying gffutils/test/test_iterators.py -> build/lib/gffutils/test 2023-07-04T22:13:25,254 copying gffutils/test/helpers_test.py -> build/lib/gffutils/test 2023-07-04T22:13:25,259 creating build/lib/gffutils/test/data 2023-07-04T22:13:25,260 copying gffutils/test/data/a.py -> build/lib/gffutils/test/data 2023-07-04T22:13:25,276 copying gffutils/test/data/sharr.gtf -> build/lib/gffutils/test/data 2023-07-04T22:13:25,280 copying gffutils/test/data/keep-order-test.gtf -> build/lib/gffutils/test/data 2023-07-04T22:13:25,284 copying gffutils/test/data/keyval_sep_in_attrs.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,288 copying gffutils/test/data/c_elegans_WS199_ann_gff.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,292 copying gffutils/test/data/gencode.vM8.5000_transcript_ids.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,302 copying gffutils/test/data/issue_197.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,306 copying gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> build/lib/gffutils/test/data 2023-07-04T22:13:25,311 copying gffutils/test/data/random-chr.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,315 copying gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,763 copying gffutils/test/data/gff_example1.gff3.gz -> build/lib/gffutils/test/data 2023-07-04T22:13:25,768 copying gffutils/test/data/nonascii -> build/lib/gffutils/test/data 2023-07-04T22:13:25,773 copying gffutils/test/data/unsanitized.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,777 copying gffutils/test/data/issue167.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,782 copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,786 copying gffutils/test/data/dm6-chr2L.fa -> build/lib/gffutils/test/data 2023-07-04T22:13:25,790 copying gffutils/test/data/synthetic.gff3 -> build/lib/gffutils/test/data 2023-07-04T22:13:25,795 copying gffutils/test/data/gms2_example.gff3 -> build/lib/gffutils/test/data 2023-07-04T22:13:25,799 copying gffutils/test/data/jgi_gff2.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,803 copying gffutils/test/data/wormbase_gff2.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,808 copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,821 copying gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,828 copying gffutils/test/data/issue174.gtf -> build/lib/gffutils/test/data 2023-07-04T22:13:25,833 copying gffutils/test/data/gencode.vM8.5000_gene_ids.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,846 copying gffutils/test/data/hybrid1.gff3 -> build/lib/gffutils/test/data 2023-07-04T22:13:25,852 copying gffutils/test/data/F3-unique-3.v2.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,858 copying gffutils/test/data/gff_example1.gff3 -> build/lib/gffutils/test/data 2023-07-04T22:13:25,863 copying gffutils/test/data/gencode.vM8.chromsizes.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,869 copying gffutils/test/data/FBgn0031208.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,875 copying gffutils/test/data/intro_docs_example.gff -> build/lib/gffutils/test/data 2023-07-04T22:13:25,880 copying gffutils/test/data/ensembl_gtf.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,886 copying gffutils/test/data/glimmer_nokeyval.gff3 -> build/lib/gffutils/test/data 2023-07-04T22:13:25,890 copying gffutils/test/data/mouse_extra_comma.gff3 -> build/lib/gffutils/test/data 2023-07-04T22:13:25,894 copying gffutils/test/data/dm6-chr2L.fa.fai -> build/lib/gffutils/test/data 2023-07-04T22:13:25,899 copying gffutils/test/data/wormbase_gff2_alt.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,903 copying gffutils/test/data/FBgn0031208.gtf -> build/lib/gffutils/test/data 2023-07-04T22:13:25,908 copying gffutils/test/data/ncbi_gff3.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,913 copying gffutils/test/data/gencode-v19.gtf -> build/lib/gffutils/test/data 2023-07-04T22:13:25,919 copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt -> build/lib/gffutils/test/data 2023-07-04T22:13:25,926 copying gffutils/test/data/download-large-annotation-files.sh -> build/lib/gffutils/test/data 2023-07-04T22:13:25,938 running build_scripts 2023-07-04T22:13:25,939 creating build/scripts-3.7 2023-07-04T22:13:25,941 copying and adjusting gffutils/scripts/gffutils-cli -> build/scripts-3.7 2023-07-04T22:13:25,946 changing mode of build/scripts-3.7/gffutils-cli from 644 to 755 2023-07-04T22:13:26,020 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-07-04T22:13:26,021 !! 2023-07-04T22:13:26,022 ******************************************************************************** 2023-07-04T22:13:26,022 Please avoid running ``setup.py`` directly. 2023-07-04T22:13:26,022 Instead, use pypa/build, pypa/installer, pypa/build or 2023-07-04T22:13:26,023 other standards-based tools. 2023-07-04T22:13:26,023 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-07-04T22:13:26,024 ******************************************************************************** 2023-07-04T22:13:26,025 !! 2023-07-04T22:13:26,025 self.initialize_options() 2023-07-04T22:13:26,088 installing to build/bdist.linux-armv7l/wheel 2023-07-04T22:13:26,088 running install 2023-07-04T22:13:26,148 running install_lib 2023-07-04T22:13:26,217 creating build/bdist.linux-armv7l 2023-07-04T22:13:26,218 creating build/bdist.linux-armv7l/wheel 2023-07-04T22:13:26,222 creating build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,224 copying build/lib/gffutils/inspect.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,228 copying build/lib/gffutils/create.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,236 copying build/lib/gffutils/convert.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,239 copying build/lib/gffutils/pybedtools_integration.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,243 copying build/lib/gffutils/feature.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,248 copying build/lib/gffutils/merge_criteria.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,251 copying build/lib/gffutils/version.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,257 creating build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,258 copying build/lib/gffutils/test/feature_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,263 copying build/lib/gffutils/test/synth_test_base.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,266 copying build/lib/gffutils/test/parser_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,270 copying build/lib/gffutils/test/performance_evaluation.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,275 copying build/lib/gffutils/test/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,278 copying build/lib/gffutils/test/test_merge.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,282 copying build/lib/gffutils/test/expected.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,287 copying build/lib/gffutils/test/test_1.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,293 copying build/lib/gffutils/test/conftest.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,296 copying build/lib/gffutils/test/test_issues.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,302 copying build/lib/gffutils/test/test_biopython_integration.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,308 creating build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,309 copying build/lib/gffutils/test/data/sharr.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,314 copying build/lib/gffutils/test/data/keep-order-test.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,318 copying build/lib/gffutils/test/data/keyval_sep_in_attrs.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,321 copying build/lib/gffutils/test/data/c_elegans_WS199_ann_gff.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,325 copying build/lib/gffutils/test/data/gencode.vM8.5000_transcript_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,335 copying build/lib/gffutils/test/data/issue_197.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,339 copying build/lib/gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,343 copying build/lib/gffutils/test/data/a.py -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,347 copying build/lib/gffutils/test/data/random-chr.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,350 copying build/lib/gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,793 copying build/lib/gffutils/test/data/gff_example1.gff3.gz -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,797 copying build/lib/gffutils/test/data/nonascii -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,801 copying build/lib/gffutils/test/data/unsanitized.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,805 copying build/lib/gffutils/test/data/issue167.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,809 copying build/lib/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,813 copying build/lib/gffutils/test/data/dm6-chr2L.fa -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,816 copying build/lib/gffutils/test/data/synthetic.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,820 copying build/lib/gffutils/test/data/gms2_example.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,824 copying build/lib/gffutils/test/data/jgi_gff2.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,828 copying build/lib/gffutils/test/data/wormbase_gff2.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,832 copying build/lib/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,841 copying build/lib/gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,847 copying build/lib/gffutils/test/data/issue174.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,851 copying build/lib/gffutils/test/data/gencode.vM8.5000_gene_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,861 copying build/lib/gffutils/test/data/hybrid1.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,865 copying build/lib/gffutils/test/data/F3-unique-3.v2.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,869 copying build/lib/gffutils/test/data/gff_example1.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,873 copying build/lib/gffutils/test/data/gencode.vM8.chromsizes.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,877 copying build/lib/gffutils/test/data/FBgn0031208.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,881 copying build/lib/gffutils/test/data/intro_docs_example.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,885 copying build/lib/gffutils/test/data/ensembl_gtf.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,889 copying build/lib/gffutils/test/data/glimmer_nokeyval.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,893 copying build/lib/gffutils/test/data/mouse_extra_comma.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,896 copying build/lib/gffutils/test/data/dm6-chr2L.fa.fai -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,900 copying build/lib/gffutils/test/data/wormbase_gff2_alt.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,903 copying build/lib/gffutils/test/data/FBgn0031208.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,908 copying build/lib/gffutils/test/data/ncbi_gff3.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,912 copying build/lib/gffutils/test/data/gencode-v19.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,916 copying build/lib/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,923 copying build/lib/gffutils/test/data/download-large-annotation-files.sh -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2023-07-04T22:13:26,927 copying build/lib/gffutils/test/attr_test_cases.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,931 copying build/lib/gffutils/test/test_merge_all.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,935 copying build/lib/gffutils/test/test_iterators.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,939 copying build/lib/gffutils/test/helpers_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2023-07-04T22:13:26,942 copying build/lib/gffutils/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,946 copying build/lib/gffutils/parser.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,950 copying build/lib/gffutils/exceptions.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,955 creating build/bdist.linux-armv7l/wheel/gffutils/scripts 2023-07-04T22:13:26,957 copying build/lib/gffutils/scripts/gffutils-flybase-convert.py -> build/bdist.linux-armv7l/wheel/gffutils/scripts 2023-07-04T22:13:26,962 copying build/lib/gffutils/iterators.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,966 copying build/lib/gffutils/interface.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,974 copying build/lib/gffutils/helpers.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,979 copying build/lib/gffutils/attributes.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,983 copying build/lib/gffutils/gffwriter.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,987 copying build/lib/gffutils/biopython_integration.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,991 copying build/lib/gffutils/bins.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,995 copying build/lib/gffutils/constants.py -> build/bdist.linux-armv7l/wheel/gffutils 2023-07-04T22:13:26,998 running install_egg_info 2023-07-04T22:13:27,158 running egg_info 2023-07-04T22:13:27,222 writing gffutils.egg-info/PKG-INFO 2023-07-04T22:13:27,225 writing dependency_links to gffutils.egg-info/dependency_links.txt 2023-07-04T22:13:27,230 writing requirements to gffutils.egg-info/requires.txt 2023-07-04T22:13:27,232 writing top-level names to gffutils.egg-info/top_level.txt 2023-07-04T22:13:27,321 reading manifest file 'gffutils.egg-info/SOURCES.txt' 2023-07-04T22:13:27,330 reading manifest template 'MANIFEST.in' 2023-07-04T22:13:27,332 warning: no files found matching '*.rst' under directory 'docs/source' 2023-07-04T22:13:27,333 warning: no files found matching '*.py' under directory 'docs/source' 2023-07-04T22:13:27,334 warning: no files found matching '*' under directory 'docs/source/images' 2023-07-04T22:13:27,337 warning: no files found matching 'docs/Makefile' 2023-07-04T22:13:27,337 warning: no files found matching 'docs/make.bat' 2023-07-04T22:13:27,341 warning: no files found matching 'gffutils/test/data/__init__.py' 2023-07-04T22:13:27,343 warning: no files found matching 'gffutils/test/data/t.py' 2023-07-04T22:13:27,344 adding license file 'LICENSE' 2023-07-04T22:13:27,360 writing manifest file 'gffutils.egg-info/SOURCES.txt' 2023-07-04T22:13:27,363 Copying gffutils.egg-info to build/bdist.linux-armv7l/wheel/gffutils-0.12-py3.7.egg-info 2023-07-04T22:13:27,382 running install_scripts 2023-07-04T22:13:27,385 creating build/bdist.linux-armv7l/wheel/gffutils-0.12.data 2023-07-04T22:13:27,386 creating build/bdist.linux-armv7l/wheel/gffutils-0.12.data/scripts 2023-07-04T22:13:27,388 copying build/scripts-3.7/gffutils-cli -> build/bdist.linux-armv7l/wheel/gffutils-0.12.data/scripts 2023-07-04T22:13:27,392 changing mode of build/bdist.linux-armv7l/wheel/gffutils-0.12.data/scripts/gffutils-cli to 755 2023-07-04T22:13:27,423 creating build/bdist.linux-armv7l/wheel/gffutils-0.12.dist-info/WHEEL 2023-07-04T22:13:27,429 creating '/tmp/pip-wheel-sqvfm0m3/gffutils-0.12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-04T22:13:27,434 adding 'gffutils/__init__.py' 2023-07-04T22:13:27,437 adding 'gffutils/attributes.py' 2023-07-04T22:13:27,441 adding 'gffutils/bins.py' 2023-07-04T22:13:27,444 adding 'gffutils/biopython_integration.py' 2023-07-04T22:13:27,447 adding 'gffutils/constants.py' 2023-07-04T22:13:27,450 adding 'gffutils/convert.py' 2023-07-04T22:13:27,466 adding 'gffutils/create.py' 2023-07-04T22:13:27,470 adding 'gffutils/exceptions.py' 2023-07-04T22:13:27,475 adding 'gffutils/feature.py' 2023-07-04T22:13:27,479 adding 'gffutils/gffwriter.py' 2023-07-04T22:13:27,486 adding 'gffutils/helpers.py' 2023-07-04T22:13:27,490 adding 'gffutils/inspect.py' 2023-07-04T22:13:27,510 adding 'gffutils/interface.py' 2023-07-04T22:13:27,517 adding 'gffutils/iterators.py' 2023-07-04T22:13:27,520 adding 'gffutils/merge_criteria.py' 2023-07-04T22:13:27,525 adding 'gffutils/parser.py' 2023-07-04T22:13:27,529 adding 'gffutils/pybedtools_integration.py' 2023-07-04T22:13:27,532 adding 'gffutils/version.py' 2023-07-04T22:13:27,536 adding 'gffutils/scripts/gffutils-flybase-convert.py' 2023-07-04T22:13:27,540 adding 'gffutils/test/__init__.py' 2023-07-04T22:13:27,544 adding 'gffutils/test/attr_test_cases.py' 2023-07-04T22:13:27,546 adding 'gffutils/test/conftest.py' 2023-07-04T22:13:27,549 adding 'gffutils/test/expected.py' 2023-07-04T22:13:27,553 adding 'gffutils/test/feature_test.py' 2023-07-04T22:13:27,555 adding 'gffutils/test/helpers_test.py' 2023-07-04T22:13:27,559 adding 'gffutils/test/parser_test.py' 2023-07-04T22:13:27,562 adding 'gffutils/test/performance_evaluation.py' 2023-07-04T22:13:27,565 adding 'gffutils/test/synth_test_base.py' 2023-07-04T22:13:27,577 adding 'gffutils/test/test_1.py' 2023-07-04T22:13:27,580 adding 'gffutils/test/test_biopython_integration.py' 2023-07-04T22:13:27,587 adding 'gffutils/test/test_issues.py' 2023-07-04T22:13:27,590 adding 'gffutils/test/test_iterators.py' 2023-07-04T22:13:27,593 adding 'gffutils/test/test_merge.py' 2023-07-04T22:13:27,596 adding 'gffutils/test/test_merge_all.py' 2023-07-04T22:13:27,607 adding 'gffutils/test/data/F3-unique-3.v2.gff' 2023-07-04T22:13:27,611 adding 'gffutils/test/data/FBgn0031208.gff' 2023-07-04T22:13:27,614 adding 'gffutils/test/data/FBgn0031208.gtf' 2023-07-04T22:13:27,641 adding 'gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt' 2023-07-04T22:13:27,667 adding 'gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt' 2023-07-04T22:13:27,672 adding 'gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt' 2023-07-04T22:13:27,675 adding 'gffutils/test/data/a.py' 2023-07-04T22:13:27,677 adding 'gffutils/test/data/c_elegans_WS199_ann_gff.txt' 2023-07-04T22:13:27,680 adding 'gffutils/test/data/c_elegans_WS199_dna_shortened.fa' 2023-07-04T22:13:27,684 adding 'gffutils/test/data/c_elegans_WS199_shortened_gff.txt' 2023-07-04T22:13:27,687 adding 'gffutils/test/data/dm6-chr2L.fa' 2023-07-04T22:13:27,690 adding 'gffutils/test/data/dm6-chr2L.fa.fai' 2023-07-04T22:13:29,377 adding 'gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff' 2023-07-04T22:13:29,561 adding 'gffutils/test/data/download-large-annotation-files.sh' 2023-07-04T22:13:29,564 adding 'gffutils/test/data/ensembl_gtf.txt' 2023-07-04T22:13:29,568 adding 'gffutils/test/data/gencode-v19.gtf' 2023-07-04T22:13:29,594 adding 'gffutils/test/data/gencode.vM8.5000_gene_ids.txt' 2023-07-04T22:13:29,620 adding 'gffutils/test/data/gencode.vM8.5000_transcript_ids.txt' 2023-07-04T22:13:29,625 adding 'gffutils/test/data/gencode.vM8.chromsizes.txt' 2023-07-04T22:13:29,628 adding 'gffutils/test/data/gff_example1.gff3' 2023-07-04T22:13:29,630 adding 'gffutils/test/data/gff_example1.gff3.gz' 2023-07-04T22:13:29,633 adding 'gffutils/test/data/glimmer_nokeyval.gff3' 2023-07-04T22:13:29,636 adding 'gffutils/test/data/gms2_example.gff3' 2023-07-04T22:13:29,638 adding 'gffutils/test/data/hybrid1.gff3' 2023-07-04T22:13:29,641 adding 'gffutils/test/data/intro_docs_example.gff' 2023-07-04T22:13:29,644 adding 'gffutils/test/data/issue167.gff' 2023-07-04T22:13:29,647 adding 'gffutils/test/data/issue174.gtf' 2023-07-04T22:13:29,650 adding 'gffutils/test/data/issue_197.gff' 2023-07-04T22:13:29,652 adding 'gffutils/test/data/jgi_gff2.txt' 2023-07-04T22:13:29,655 adding 'gffutils/test/data/keep-order-test.gtf' 2023-07-04T22:13:29,657 adding 'gffutils/test/data/keyval_sep_in_attrs.gff' 2023-07-04T22:13:29,660 adding 'gffutils/test/data/mouse_extra_comma.gff3' 2023-07-04T22:13:29,663 adding 'gffutils/test/data/ncbi_gff3.txt' 2023-07-04T22:13:29,666 adding 'gffutils/test/data/nonascii' 2023-07-04T22:13:29,669 adding 'gffutils/test/data/random-chr.gff' 2023-07-04T22:13:29,672 adding 'gffutils/test/data/sharr.gtf' 2023-07-04T22:13:29,675 adding 'gffutils/test/data/synthetic.gff3' 2023-07-04T22:13:29,677 adding 'gffutils/test/data/unsanitized.gff' 2023-07-04T22:13:29,680 adding 'gffutils/test/data/wormbase_gff2.txt' 2023-07-04T22:13:29,683 adding 'gffutils/test/data/wormbase_gff2_alt.txt' 2023-07-04T22:13:29,690 adding 'gffutils-0.12.data/scripts/gffutils-cli' 2023-07-04T22:13:29,694 adding 'gffutils-0.12.dist-info/LICENSE' 2023-07-04T22:13:29,697 adding 'gffutils-0.12.dist-info/METADATA' 2023-07-04T22:13:29,699 adding 'gffutils-0.12.dist-info/WHEEL' 2023-07-04T22:13:29,701 adding 'gffutils-0.12.dist-info/top_level.txt' 2023-07-04T22:13:29,705 adding 'gffutils-0.12.dist-info/RECORD' 2023-07-04T22:13:29,762 removing build/bdist.linux-armv7l/wheel 2023-07-04T22:13:29,972 Building wheel for gffutils (setup.py): finished with status 'done' 2023-07-04T22:13:30,027 Created wheel for gffutils: filename=gffutils-0.12-py3-none-any.whl size=1622024 sha256=50cd991eb06617b36786baf3a81e83df18eeb7155224754c85d85f53b88b7119 2023-07-04T22:13:30,030 Stored in directory: /tmp/pip-ephem-wheel-cache-d5y57irs/wheels/e7/93/19/a471e97d5e895c57babee2fc8cbe7b9818532e144eed3dd2bd 2023-07-04T22:13:30,064 Successfully built gffutils 2023-07-04T22:13:30,190 Removed build tracker: '/tmp/pip-build-tracker-q_ungwnl'