2023-07-10T22:30:15,703 Created temporary directory: /tmp/pip-build-tracker-qugsooy8 2023-07-10T22:30:15,706 Initialized build tracking at /tmp/pip-build-tracker-qugsooy8 2023-07-10T22:30:15,706 Created build tracker: /tmp/pip-build-tracker-qugsooy8 2023-07-10T22:30:15,707 Entered build tracker: /tmp/pip-build-tracker-qugsooy8 2023-07-10T22:30:15,708 Created temporary directory: /tmp/pip-wheel-2xjtq2ij 2023-07-10T22:30:15,716 Created temporary directory: /tmp/pip-ephem-wheel-cache-htmxmtxl 2023-07-10T22:30:15,768 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-10T22:30:15,776 2 location(s) to search for versions of omicsdata: 2023-07-10T22:30:15,776 * https://pypi.org/simple/omicsdata/ 2023-07-10T22:30:15,776 * https://www.piwheels.org/simple/omicsdata/ 2023-07-10T22:30:15,777 Fetching project page and analyzing links: https://pypi.org/simple/omicsdata/ 2023-07-10T22:30:15,778 Getting page https://pypi.org/simple/omicsdata/ 2023-07-10T22:30:15,783 Found index url https://pypi.org/simple/ 2023-07-10T22:30:15,969 Fetched page https://pypi.org/simple/omicsdata/ as application/vnd.pypi.simple.v1+json 2023-07-10T22:30:15,972 Skipping link: No binaries permitted for omicsdata: https://files.pythonhosted.org/packages/69/b4/99dcc7f2c8d0d4facbb52b81c076dd2b8b7e26dbdcf1a9a54cfad33dd452/omicsdata-1.0-py3-none-any.whl (from https://pypi.org/simple/omicsdata/) (requires-python:>=3.7) 2023-07-10T22:30:15,973 Found link https://files.pythonhosted.org/packages/c3/72/a9b862ec427cd33442ff7e9ff81d065a7cc0145bb70c827a016eaf0774dc/omicsdata-1.0.tar.gz (from https://pypi.org/simple/omicsdata/) (requires-python:>=3.7), version: 1.0 2023-07-10T22:30:15,974 Fetching project page and analyzing links: https://www.piwheels.org/simple/omicsdata/ 2023-07-10T22:30:15,975 Getting page https://www.piwheels.org/simple/omicsdata/ 2023-07-10T22:30:15,977 Found index url https://www.piwheels.org/simple/ 2023-07-10T22:30:16,202 Fetched page https://www.piwheels.org/simple/omicsdata/ as text/html 2023-07-10T22:30:16,204 Skipping link: not a file: https://www.piwheels.org/simple/omicsdata/ 2023-07-10T22:30:16,205 Skipping link: not a file: https://pypi.org/simple/omicsdata/ 2023-07-10T22:30:16,237 Given no hashes to check 1 links for project 'omicsdata': discarding no candidates 2023-07-10T22:30:16,268 Collecting omicsdata==1.0 2023-07-10T22:30:16,273 Created temporary directory: /tmp/pip-unpack-3208hp5s 2023-07-10T22:30:16,459 Downloading omicsdata-1.0.tar.gz (15 kB) 2023-07-10T22:30:16,596 Added omicsdata==1.0 from https://files.pythonhosted.org/packages/c3/72/a9b862ec427cd33442ff7e9ff81d065a7cc0145bb70c827a016eaf0774dc/omicsdata-1.0.tar.gz to build tracker '/tmp/pip-build-tracker-qugsooy8' 2023-07-10T22:30:16,604 Created temporary directory: /tmp/pip-build-env-c6pj8ot6 2023-07-10T22:30:16,628 Installing build dependencies: started 2023-07-10T22:30:16,630 Running command pip subprocess to install build dependencies 2023-07-10T22:30:19,334 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-07-10T22:30:20,097 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-10T22:30:23,962 Collecting setuptools>=61.0 2023-07-10T22:30:24,128 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-10T22:30:29,099 Installing collected packages: setuptools 2023-07-10T22:30:33,310 Successfully installed setuptools-68.0.0 2023-07-10T22:30:33,748 Installing build dependencies: finished with status 'done' 2023-07-10T22:30:33,759 Getting requirements to build wheel: started 2023-07-10T22:30:33,761 Running command Getting requirements to build wheel 2023-07-10T22:30:35,630 running egg_info 2023-07-10T22:30:35,639 writing src/omicsdata.egg-info/PKG-INFO 2023-07-10T22:30:35,643 writing dependency_links to src/omicsdata.egg-info/dependency_links.txt 2023-07-10T22:30:35,648 writing top-level names to src/omicsdata.egg-info/top_level.txt 2023-07-10T22:30:35,688 reading manifest file 'src/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:35,692 adding license file 'LICENSE' 2023-07-10T22:30:35,699 writing manifest file 'src/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:35,868 Getting requirements to build wheel: finished with status 'done' 2023-07-10T22:30:35,893 Installing backend dependencies: started 2023-07-10T22:30:35,895 Running command pip subprocess to install backend dependencies 2023-07-10T22:30:38,602 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-07-10T22:30:39,393 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-10T22:30:40,275 Collecting wheel 2023-07-10T22:30:40,313 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-07-10T22:30:44,486 Installing collected packages: wheel 2023-07-10T22:30:44,937 Creating /tmp/pip-build-env-c6pj8ot6/normal/bin 2023-07-10T22:30:44,943 changing mode of /tmp/pip-build-env-c6pj8ot6/normal/bin/wheel to 755 2023-07-10T22:30:44,970 Successfully installed wheel-0.40.0 2023-07-10T22:30:45,351 Installing backend dependencies: finished with status 'done' 2023-07-10T22:30:45,357 Created temporary directory: /tmp/pip-modern-metadata-c8ujlg13 2023-07-10T22:30:45,364 Preparing metadata (pyproject.toml): started 2023-07-10T22:30:45,368 Running command Preparing metadata (pyproject.toml) 2023-07-10T22:30:47,303 running dist_info 2023-07-10T22:30:47,315 creating /tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info 2023-07-10T22:30:47,328 writing /tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info/PKG-INFO 2023-07-10T22:30:47,333 writing dependency_links to /tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info/dependency_links.txt 2023-07-10T22:30:47,337 writing top-level names to /tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info/top_level.txt 2023-07-10T22:30:47,340 writing manifest file '/tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:47,381 reading manifest file '/tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:47,386 adding license file 'LICENSE' 2023-07-10T22:30:47,392 writing manifest file '/tmp/pip-modern-metadata-c8ujlg13/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:47,394 creating '/tmp/pip-modern-metadata-c8ujlg13/omicsdata-1.0.dist-info' 2023-07-10T22:30:47,629 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-10T22:30:47,644 Source in /tmp/pip-wheel-2xjtq2ij/omicsdata_14e5aa276f824e9a8eba87282e7ba997 has version 1.0, which satisfies requirement omicsdata==1.0 from https://files.pythonhosted.org/packages/c3/72/a9b862ec427cd33442ff7e9ff81d065a7cc0145bb70c827a016eaf0774dc/omicsdata-1.0.tar.gz 2023-07-10T22:30:47,646 Removed omicsdata==1.0 from https://files.pythonhosted.org/packages/c3/72/a9b862ec427cd33442ff7e9ff81d065a7cc0145bb70c827a016eaf0774dc/omicsdata-1.0.tar.gz from build tracker '/tmp/pip-build-tracker-qugsooy8' 2023-07-10T22:30:47,659 Created temporary directory: /tmp/pip-unpack-aprezr85 2023-07-10T22:30:47,660 Building wheels for collected packages: omicsdata 2023-07-10T22:30:47,669 Created temporary directory: /tmp/pip-wheel-wilzh3sg 2023-07-10T22:30:47,670 Destination directory: /tmp/pip-wheel-wilzh3sg 2023-07-10T22:30:47,675 Building wheel for omicsdata (pyproject.toml): started 2023-07-10T22:30:47,677 Running command Building wheel for omicsdata (pyproject.toml) 2023-07-10T22:30:49,452 running bdist_wheel 2023-07-10T22:30:49,487 running build 2023-07-10T22:30:49,488 running build_py 2023-07-10T22:30:49,498 creating build 2023-07-10T22:30:49,499 creating build/lib 2023-07-10T22:30:49,500 creating build/lib/omicsdata 2023-07-10T22:30:49,502 copying src/omicsdata/__init__.py -> build/lib/omicsdata 2023-07-10T22:30:49,507 creating build/lib/omicsdata/ssm 2023-07-10T22:30:49,509 copying src/omicsdata/ssm/parse.py -> build/lib/omicsdata/ssm 2023-07-10T22:30:49,514 copying src/omicsdata/ssm/common.py -> build/lib/omicsdata/ssm 2023-07-10T22:30:49,517 copying src/omicsdata/ssm/constants.py -> build/lib/omicsdata/ssm 2023-07-10T22:30:49,521 copying src/omicsdata/ssm/columns.py -> build/lib/omicsdata/ssm 2023-07-10T22:30:49,524 copying src/omicsdata/ssm/__init__.py -> build/lib/omicsdata/ssm 2023-07-10T22:30:49,527 copying src/omicsdata/ssm/supervariants.py -> build/lib/omicsdata/ssm 2023-07-10T22:30:49,533 creating build/lib/omicsdata/npz 2023-07-10T22:30:49,534 copying src/omicsdata/npz/archive.py -> build/lib/omicsdata/npz 2023-07-10T22:30:49,539 copying src/omicsdata/npz/__init__.py -> build/lib/omicsdata/npz 2023-07-10T22:30:49,543 creating build/lib/omicsdata/tree 2023-07-10T22:30:49,545 copying src/omicsdata/tree/adj.py -> build/lib/omicsdata/tree 2023-07-10T22:30:49,548 copying src/omicsdata/tree/parents.py -> build/lib/omicsdata/tree 2023-07-10T22:30:49,553 creating build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,555 copying src/omicsdata/ssm/convert/ssm_to_viber.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,559 copying src/omicsdata/ssm/convert/vcf_to_ssm.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,563 copying src/omicsdata/ssm/convert/ssm_to_mobster_tsv.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,568 copying src/omicsdata/ssm/convert/ssm_to_scc_tsv.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,571 copying src/omicsdata/ssm/convert/ssm_base_converter.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,576 copying src/omicsdata/ssm/convert/ssm_to_fastclone.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,579 copying src/omicsdata/ssm/convert/ssm_to_pcvi_tsv.py -> build/lib/omicsdata/ssm/convert 2023-07-10T22:30:49,583 running egg_info 2023-07-10T22:30:49,600 writing src/omicsdata.egg-info/PKG-INFO 2023-07-10T22:30:49,604 writing dependency_links to src/omicsdata.egg-info/dependency_links.txt 2023-07-10T22:30:49,607 writing top-level names to src/omicsdata.egg-info/top_level.txt 2023-07-10T22:30:49,629 reading manifest file 'src/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:49,633 adding license file 'LICENSE' 2023-07-10T22:30:49,640 writing manifest file 'src/omicsdata.egg-info/SOURCES.txt' 2023-07-10T22:30:49,667 installing to build/bdist.linux-armv7l/wheel 2023-07-10T22:30:49,668 running install 2023-07-10T22:30:49,729 running install_lib 2023-07-10T22:30:49,740 creating build/bdist.linux-armv7l 2023-07-10T22:30:49,741 creating build/bdist.linux-armv7l/wheel 2023-07-10T22:30:49,744 creating build/bdist.linux-armv7l/wheel/omicsdata 2023-07-10T22:30:49,748 creating build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,750 copying build/lib/omicsdata/ssm/parse.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,755 copying build/lib/omicsdata/ssm/common.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,759 copying build/lib/omicsdata/ssm/constants.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,763 copying build/lib/omicsdata/ssm/columns.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,767 copying build/lib/omicsdata/ssm/__init__.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,770 copying build/lib/omicsdata/ssm/supervariants.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm 2023-07-10T22:30:49,776 creating build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,778 copying build/lib/omicsdata/ssm/convert/ssm_to_viber.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,782 copying build/lib/omicsdata/ssm/convert/vcf_to_ssm.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,786 copying build/lib/omicsdata/ssm/convert/ssm_to_mobster_tsv.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,790 copying build/lib/omicsdata/ssm/convert/ssm_to_scc_tsv.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,794 copying build/lib/omicsdata/ssm/convert/ssm_base_converter.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,799 copying build/lib/omicsdata/ssm/convert/ssm_to_fastclone.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,803 copying build/lib/omicsdata/ssm/convert/ssm_to_pcvi_tsv.py -> build/bdist.linux-armv7l/wheel/omicsdata/ssm/convert 2023-07-10T22:30:49,808 creating build/bdist.linux-armv7l/wheel/omicsdata/npz 2023-07-10T22:30:49,810 copying build/lib/omicsdata/npz/archive.py -> build/bdist.linux-armv7l/wheel/omicsdata/npz 2023-07-10T22:30:49,815 copying build/lib/omicsdata/npz/__init__.py -> build/bdist.linux-armv7l/wheel/omicsdata/npz 2023-07-10T22:30:49,819 creating build/bdist.linux-armv7l/wheel/omicsdata/tree 2023-07-10T22:30:49,820 copying build/lib/omicsdata/tree/adj.py -> build/bdist.linux-armv7l/wheel/omicsdata/tree 2023-07-10T22:30:49,824 copying build/lib/omicsdata/tree/parents.py -> build/bdist.linux-armv7l/wheel/omicsdata/tree 2023-07-10T22:30:49,828 copying build/lib/omicsdata/__init__.py -> build/bdist.linux-armv7l/wheel/omicsdata 2023-07-10T22:30:49,830 running install_egg_info 2023-07-10T22:30:49,840 Copying src/omicsdata.egg-info to build/bdist.linux-armv7l/wheel/omicsdata-1.0-py3.7.egg-info 2023-07-10T22:30:49,856 running install_scripts 2023-07-10T22:30:49,880 creating build/bdist.linux-armv7l/wheel/omicsdata-1.0.dist-info/WHEEL 2023-07-10T22:30:49,885 creating '/tmp/pip-wheel-wilzh3sg/.tmp-68mk1fia/omicsdata-1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-10T22:30:49,890 adding 'omicsdata/__init__.py' 2023-07-10T22:30:49,894 adding 'omicsdata/npz/__init__.py' 2023-07-10T22:30:49,897 adding 'omicsdata/npz/archive.py' 2023-07-10T22:30:49,901 adding 'omicsdata/ssm/__init__.py' 2023-07-10T22:30:49,904 adding 'omicsdata/ssm/columns.py' 2023-07-10T22:30:49,906 adding 'omicsdata/ssm/common.py' 2023-07-10T22:30:49,909 adding 'omicsdata/ssm/constants.py' 2023-07-10T22:30:49,913 adding 'omicsdata/ssm/parse.py' 2023-07-10T22:30:49,916 adding 'omicsdata/ssm/supervariants.py' 2023-07-10T22:30:49,921 adding 'omicsdata/ssm/convert/ssm_base_converter.py' 2023-07-10T22:30:49,924 adding 'omicsdata/ssm/convert/ssm_to_fastclone.py' 2023-07-10T22:30:49,927 adding 'omicsdata/ssm/convert/ssm_to_mobster_tsv.py' 2023-07-10T22:30:49,930 adding 'omicsdata/ssm/convert/ssm_to_pcvi_tsv.py' 2023-07-10T22:30:49,933 adding 'omicsdata/ssm/convert/ssm_to_scc_tsv.py' 2023-07-10T22:30:49,936 adding 'omicsdata/ssm/convert/ssm_to_viber.py' 2023-07-10T22:30:49,940 adding 'omicsdata/ssm/convert/vcf_to_ssm.py' 2023-07-10T22:30:49,944 adding 'omicsdata/tree/adj.py' 2023-07-10T22:30:49,946 adding 'omicsdata/tree/parents.py' 2023-07-10T22:30:49,951 adding 'omicsdata-1.0.dist-info/LICENSE' 2023-07-10T22:30:49,953 adding 'omicsdata-1.0.dist-info/METADATA' 2023-07-10T22:30:49,955 adding 'omicsdata-1.0.dist-info/WHEEL' 2023-07-10T22:30:49,957 adding 'omicsdata-1.0.dist-info/top_level.txt' 2023-07-10T22:30:49,959 adding 'omicsdata-1.0.dist-info/RECORD' 2023-07-10T22:30:49,963 removing build/bdist.linux-armv7l/wheel 2023-07-10T22:30:50,159 Building wheel for omicsdata (pyproject.toml): finished with status 'done' 2023-07-10T22:30:50,172 Created wheel for omicsdata: filename=omicsdata-1.0-py3-none-any.whl size=21747 sha256=1b7d4380205cf1b667c43c1085f58526514de4613ffedce712345ccee71aec2c 2023-07-10T22:30:50,174 Stored in directory: /tmp/pip-ephem-wheel-cache-htmxmtxl/wheels/d1/d9/e7/4070905e9b381ffd9485131f0ec3ce0b39f3bca6ce5e275cec 2023-07-10T22:30:50,200 Successfully built omicsdata 2023-07-10T22:30:50,208 Removed build tracker: '/tmp/pip-build-tracker-qugsooy8'