2023-07-20T03:36:28,273 Created temporary directory: /tmp/pip-build-tracker-ccw65bgy 2023-07-20T03:36:28,274 Initialized build tracking at /tmp/pip-build-tracker-ccw65bgy 2023-07-20T03:36:28,274 Created build tracker: /tmp/pip-build-tracker-ccw65bgy 2023-07-20T03:36:28,274 Entered build tracker: /tmp/pip-build-tracker-ccw65bgy 2023-07-20T03:36:28,275 Created temporary directory: /tmp/pip-wheel-f1md6zi1 2023-07-20T03:36:28,278 Created temporary directory: /tmp/pip-ephem-wheel-cache-fc6eo__1 2023-07-20T03:36:28,301 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-20T03:36:28,304 2 location(s) to search for versions of phynetpy: 2023-07-20T03:36:28,304 * https://pypi.org/simple/phynetpy/ 2023-07-20T03:36:28,304 * https://www.piwheels.org/simple/phynetpy/ 2023-07-20T03:36:28,304 Fetching project page and analyzing links: https://pypi.org/simple/phynetpy/ 2023-07-20T03:36:28,305 Getting page https://pypi.org/simple/phynetpy/ 2023-07-20T03:36:28,307 Found index url https://pypi.org/simple/ 2023-07-20T03:36:28,356 Fetched page https://pypi.org/simple/phynetpy/ as application/vnd.pypi.simple.v1+json 2023-07-20T03:36:28,357 Skipping link: No binaries permitted for phynetpy: https://files.pythonhosted.org/packages/ca/09/330fee700fddd31c7a667cc70c35300e3a4771a3eada01cfd210cffff202/PhyNetPy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-20T03:36:28,358 Found link https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.3 2023-07-20T03:36:28,358 Fetching project page and analyzing links: https://www.piwheels.org/simple/phynetpy/ 2023-07-20T03:36:28,359 Getting page https://www.piwheels.org/simple/phynetpy/ 2023-07-20T03:36:28,360 Found index url https://www.piwheels.org/simple/ 2023-07-20T03:36:28,531 Fetched page https://www.piwheels.org/simple/phynetpy/ as text/html 2023-07-20T03:36:28,532 Skipping link: No binaries permitted for phynetpy: https://www.piwheels.org/simple/phynetpy/PhyNetPy-0.1.0-py3-none-any.whl#sha256=6e28656e552521e811ba9c1c9a7fe9b88ec882d9c1bfb898ea789ca8e45c98c7 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-20T03:36:28,533 Skipping link: not a file: https://www.piwheels.org/simple/phynetpy/ 2023-07-20T03:36:28,533 Skipping link: not a file: https://pypi.org/simple/phynetpy/ 2023-07-20T03:36:28,550 Given no hashes to check 1 links for project 'phynetpy': discarding no candidates 2023-07-20T03:36:28,567 Collecting phynetpy==0.0.3 2023-07-20T03:36:28,569 Created temporary directory: /tmp/pip-unpack-riyn2vh2 2023-07-20T03:36:28,717 Downloading PhyNetPy-0.0.3.tar.gz (75 kB) 2023-07-20T03:36:28,821 Added phynetpy==0.0.3 from https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-ccw65bgy' 2023-07-20T03:36:28,825 Created temporary directory: /tmp/pip-build-env-9r_vkhnq 2023-07-20T03:36:28,835 Installing build dependencies: started 2023-07-20T03:36:28,836 Running command pip subprocess to install build dependencies 2023-07-20T03:36:30,030 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-20T03:36:30,383 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-20T03:36:32,046 Collecting setuptools>=61.0.0 2023-07-20T03:36:32,122 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-20T03:36:32,369 Collecting wheel 2023-07-20T03:36:32,386 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-07-20T03:36:34,174 Installing collected packages: wheel, setuptools 2023-07-20T03:36:34,398 Creating /tmp/pip-build-env-9r_vkhnq/overlay/bin 2023-07-20T03:36:34,400 changing mode of /tmp/pip-build-env-9r_vkhnq/overlay/bin/wheel to 755 2023-07-20T03:36:36,500 Successfully installed setuptools-68.0.0 wheel-0.40.0 2023-07-20T03:36:36,512 [notice] A new release of pip is available: 23.1.2 -> 23.2 2023-07-20T03:36:36,512 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-20T03:36:36,764 Installing build dependencies: finished with status 'done' 2023-07-20T03:36:36,769 Getting requirements to build wheel: started 2023-07-20T03:36:36,770 Running command Getting requirements to build wheel 2023-07-20T03:36:37,412 running egg_info 2023-07-20T03:36:37,417 writing src/PhyNetPy.egg-info/PKG-INFO 2023-07-20T03:36:37,418 writing dependency_links to src/PhyNetPy.egg-info/dependency_links.txt 2023-07-20T03:36:37,420 writing requirements to src/PhyNetPy.egg-info/requires.txt 2023-07-20T03:36:37,422 writing top-level names to src/PhyNetPy.egg-info/top_level.txt 2023-07-20T03:36:37,441 reading manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:37,444 adding license file 'LICENSE' 2023-07-20T03:36:37,447 writing manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:37,508 Getting requirements to build wheel: finished with status 'done' 2023-07-20T03:36:37,516 Created temporary directory: /tmp/pip-modern-metadata-vjyettjb 2023-07-20T03:36:37,519 Preparing metadata (pyproject.toml): started 2023-07-20T03:36:37,520 Running command Preparing metadata (pyproject.toml) 2023-07-20T03:36:38,052 running dist_info 2023-07-20T03:36:38,069 creating /tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info 2023-07-20T03:36:38,073 writing /tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/PKG-INFO 2023-07-20T03:36:38,076 writing dependency_links to /tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/dependency_links.txt 2023-07-20T03:36:38,078 writing requirements to /tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/requires.txt 2023-07-20T03:36:38,079 writing top-level names to /tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/top_level.txt 2023-07-20T03:36:38,080 writing manifest file '/tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:38,102 reading manifest file '/tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:38,104 adding license file 'LICENSE' 2023-07-20T03:36:38,107 writing manifest file '/tmp/pip-modern-metadata-vjyettjb/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:38,108 creating '/tmp/pip-modern-metadata-vjyettjb/PhyNetPy-0.0.3.dist-info' 2023-07-20T03:36:38,273 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-20T03:36:38,279 Source in /tmp/pip-wheel-f1md6zi1/phynetpy_332f69745d1e4b9b9b2a348cef7271c3 has version 0.0.3, which satisfies requirement phynetpy==0.0.3 from https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz 2023-07-20T03:36:38,280 Removed phynetpy==0.0.3 from https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-ccw65bgy' 2023-07-20T03:36:38,286 Created temporary directory: /tmp/pip-unpack-thx6dhkz 2023-07-20T03:36:38,286 Building wheels for collected packages: phynetpy 2023-07-20T03:36:38,290 Created temporary directory: /tmp/pip-wheel-ctgi5iwj 2023-07-20T03:36:38,290 Destination directory: /tmp/pip-wheel-ctgi5iwj 2023-07-20T03:36:38,292 Building wheel for phynetpy (pyproject.toml): started 2023-07-20T03:36:38,293 Running command Building wheel for phynetpy (pyproject.toml) 2023-07-20T03:36:38,862 running bdist_wheel 2023-07-20T03:36:38,895 running build 2023-07-20T03:36:38,896 running build_py 2023-07-20T03:36:38,904 creating build 2023-07-20T03:36:38,904 creating build/lib 2023-07-20T03:36:38,905 creating build/lib/PhyNetPy 2023-07-20T03:36:38,906 copying src/PhyNetPy/GeneTrees.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,908 copying src/PhyNetPy/Graph.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,911 copying src/PhyNetPy/BirthDeath.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,913 copying src/PhyNetPy/Matrix.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,915 copying src/PhyNetPy/PhySNP.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,918 copying src/PhyNetPy/PhyAllop.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,921 copying src/PhyNetPy/MetropolisHastings.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,923 copying src/PhyNetPy/GTR2.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,925 copying src/PhyNetPy/NetworkParser.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,927 copying src/PhyNetPy/ModelGraph.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,930 copying src/PhyNetPy/Alphabet.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,932 copying src/PhyNetPy/SequenceSim.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,934 copying src/PhyNetPy/State.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,936 copying src/PhyNetPy/tutorial_test.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,937 copying src/PhyNetPy/MSA.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,939 copying src/PhyNetPy/__init__.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,941 copying src/PhyNetPy/Node.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,943 copying src/PhyNetPy/ModelFactory.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,945 copying src/PhyNetPy/GTR.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,947 copying src/PhyNetPy/Move.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,951 copying src/PhyNetPy/Newick.py -> build/lib/PhyNetPy 2023-07-20T03:36:38,953 creating build/lib/PhyNetPy/Bayesian 2023-07-20T03:36:38,954 copying src/PhyNetPy/Bayesian/__init__.py -> build/lib/PhyNetPy/Bayesian 2023-07-20T03:36:38,955 running egg_info 2023-07-20T03:36:38,972 writing src/PhyNetPy.egg-info/PKG-INFO 2023-07-20T03:36:38,973 writing dependency_links to src/PhyNetPy.egg-info/dependency_links.txt 2023-07-20T03:36:38,974 writing requirements to src/PhyNetPy.egg-info/requires.txt 2023-07-20T03:36:38,975 writing top-level names to src/PhyNetPy.egg-info/top_level.txt 2023-07-20T03:36:38,984 reading manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:38,986 adding license file 'LICENSE' 2023-07-20T03:36:38,989 writing manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T03:36:39,006 installing to build/bdist.linux-armv7l/wheel 2023-07-20T03:36:39,007 running install 2023-07-20T03:36:39,032 running install_lib 2023-07-20T03:36:39,038 creating build/bdist.linux-armv7l 2023-07-20T03:36:39,038 creating build/bdist.linux-armv7l/wheel 2023-07-20T03:36:39,040 creating build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,041 copying build/lib/PhyNetPy/GeneTrees.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,043 copying build/lib/PhyNetPy/Graph.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,046 copying build/lib/PhyNetPy/BirthDeath.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,048 copying build/lib/PhyNetPy/Matrix.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,051 copying build/lib/PhyNetPy/PhySNP.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,053 copying build/lib/PhyNetPy/PhyAllop.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,056 copying build/lib/PhyNetPy/MetropolisHastings.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,058 copying build/lib/PhyNetPy/GTR2.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,060 copying build/lib/PhyNetPy/NetworkParser.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,063 copying build/lib/PhyNetPy/ModelGraph.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,066 copying build/lib/PhyNetPy/Alphabet.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,068 copying build/lib/PhyNetPy/SequenceSim.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,070 copying build/lib/PhyNetPy/State.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,071 copying build/lib/PhyNetPy/tutorial_test.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,073 copying build/lib/PhyNetPy/MSA.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,075 copying build/lib/PhyNetPy/__init__.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,077 copying build/lib/PhyNetPy/Node.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,079 creating build/bdist.linux-armv7l/wheel/PhyNetPy/Bayesian 2023-07-20T03:36:39,080 copying build/lib/PhyNetPy/Bayesian/__init__.py -> build/bdist.linux-armv7l/wheel/PhyNetPy/Bayesian 2023-07-20T03:36:39,082 copying build/lib/PhyNetPy/ModelFactory.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,084 copying build/lib/PhyNetPy/GTR.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,086 copying build/lib/PhyNetPy/Move.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,089 copying build/lib/PhyNetPy/Newick.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T03:36:39,091 running install_egg_info 2023-07-20T03:36:39,101 Copying src/PhyNetPy.egg-info to build/bdist.linux-armv7l/wheel/PhyNetPy-0.0.3-py3.9.egg-info 2023-07-20T03:36:39,113 running install_scripts 2023-07-20T03:36:39,130 creating build/bdist.linux-armv7l/wheel/PhyNetPy-0.0.3.dist-info/WHEEL 2023-07-20T03:36:39,133 creating '/tmp/pip-wheel-ctgi5iwj/.tmp-ocmrghx9/PhyNetPy-0.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-20T03:36:39,136 adding 'PhyNetPy/Alphabet.py' 2023-07-20T03:36:39,139 adding 'PhyNetPy/BirthDeath.py' 2023-07-20T03:36:39,141 adding 'PhyNetPy/GTR.py' 2023-07-20T03:36:39,143 adding 'PhyNetPy/GTR2.py' 2023-07-20T03:36:39,144 adding 'PhyNetPy/GeneTrees.py' 2023-07-20T03:36:39,149 adding 'PhyNetPy/Graph.py' 2023-07-20T03:36:39,150 adding 'PhyNetPy/MSA.py' 2023-07-20T03:36:39,152 adding 'PhyNetPy/Matrix.py' 2023-07-20T03:36:39,154 adding 'PhyNetPy/MetropolisHastings.py' 2023-07-20T03:36:39,156 adding 'PhyNetPy/ModelFactory.py' 2023-07-20T03:36:39,163 adding 'PhyNetPy/ModelGraph.py' 2023-07-20T03:36:39,169 adding 'PhyNetPy/Move.py' 2023-07-20T03:36:39,171 adding 'PhyNetPy/NetworkParser.py' 2023-07-20T03:36:39,173 adding 'PhyNetPy/Newick.py' 2023-07-20T03:36:39,174 adding 'PhyNetPy/Node.py' 2023-07-20T03:36:39,180 adding 'PhyNetPy/PhyAllop.py' 2023-07-20T03:36:39,184 adding 'PhyNetPy/PhySNP.py' 2023-07-20T03:36:39,186 adding 'PhyNetPy/SequenceSim.py' 2023-07-20T03:36:39,187 adding 'PhyNetPy/State.py' 2023-07-20T03:36:39,188 adding 'PhyNetPy/__init__.py' 2023-07-20T03:36:39,190 adding 'PhyNetPy/tutorial_test.py' 2023-07-20T03:36:39,192 adding 'PhyNetPy/Bayesian/__init__.py' 2023-07-20T03:36:39,194 adding 'PhyNetPy-0.0.3.dist-info/LICENSE' 2023-07-20T03:36:39,195 adding 'PhyNetPy-0.0.3.dist-info/METADATA' 2023-07-20T03:36:39,196 adding 'PhyNetPy-0.0.3.dist-info/WHEEL' 2023-07-20T03:36:39,197 adding 'PhyNetPy-0.0.3.dist-info/top_level.txt' 2023-07-20T03:36:39,198 adding 'PhyNetPy-0.0.3.dist-info/zip-safe' 2023-07-20T03:36:39,199 adding 'PhyNetPy-0.0.3.dist-info/RECORD' 2023-07-20T03:36:39,202 removing build/bdist.linux-armv7l/wheel 2023-07-20T03:36:39,288 Building wheel for phynetpy (pyproject.toml): finished with status 'done' 2023-07-20T03:36:39,295 Created wheel for phynetpy: filename=PhyNetPy-0.0.3-py3-none-any.whl size=83802 sha256=daaf000f384f301addcda39f19569d5dab0097cdd8603085af86618ab61ab0a2 2023-07-20T03:36:39,296 Stored in directory: /tmp/pip-ephem-wheel-cache-fc6eo__1/wheels/82/ee/bb/fe5ddaca4b253d1aa1aaa71661747ed24cb98e16107f453354 2023-07-20T03:36:39,308 Successfully built phynetpy 2023-07-20T03:36:39,313 Removed build tracker: '/tmp/pip-build-tracker-ccw65bgy'