2023-07-20T18:48:50,885 Created temporary directory: /tmp/pip-build-tracker-dx6d8exe 2023-07-20T18:48:50,887 Initialized build tracking at /tmp/pip-build-tracker-dx6d8exe 2023-07-20T18:48:50,887 Created build tracker: /tmp/pip-build-tracker-dx6d8exe 2023-07-20T18:48:50,887 Entered build tracker: /tmp/pip-build-tracker-dx6d8exe 2023-07-20T18:48:50,887 Created temporary directory: /tmp/pip-wheel-sooxda1j 2023-07-20T18:48:50,891 Created temporary directory: /tmp/pip-ephem-wheel-cache-53e14nfv 2023-07-20T18:48:50,913 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-20T18:48:50,917 2 location(s) to search for versions of phynetpy: 2023-07-20T18:48:50,917 * https://pypi.org/simple/phynetpy/ 2023-07-20T18:48:50,917 * https://www.piwheels.org/simple/phynetpy/ 2023-07-20T18:48:50,917 Fetching project page and analyzing links: https://pypi.org/simple/phynetpy/ 2023-07-20T18:48:50,918 Getting page https://pypi.org/simple/phynetpy/ 2023-07-20T18:48:50,919 Found index url https://pypi.org/simple/ 2023-07-20T18:48:50,978 Fetched page https://pypi.org/simple/phynetpy/ as application/vnd.pypi.simple.v1+json 2023-07-20T18:48:50,979 Skipping link: No binaries permitted for phynetpy: https://files.pythonhosted.org/packages/ca/09/330fee700fddd31c7a667cc70c35300e3a4771a3eada01cfd210cffff202/PhyNetPy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-20T18:48:50,980 Found link https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.3 2023-07-20T18:48:50,981 Found link https://files.pythonhosted.org/packages/12/5a/4771d05caf1f35a2bed8a225f0d0e5451d92ca18b69b5f38840265b5fd66/PhyNetPy-0.0.7.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.7 2023-07-20T18:48:50,981 Fetching project page and analyzing links: https://www.piwheels.org/simple/phynetpy/ 2023-07-20T18:48:50,981 Getting page https://www.piwheels.org/simple/phynetpy/ 2023-07-20T18:48:50,982 Found index url https://www.piwheels.org/simple/ 2023-07-20T18:48:51,168 Fetched page https://www.piwheels.org/simple/phynetpy/ as text/html 2023-07-20T18:48:51,169 Skipping link: No binaries permitted for phynetpy: https://www.piwheels.org/simple/phynetpy/PhyNetPy-0.1.0-py3-none-any.whl#sha256=6e28656e552521e811ba9c1c9a7fe9b88ec882d9c1bfb898ea789ca8e45c98c7 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-20T18:48:51,169 Skipping link: No binaries permitted for phynetpy: https://www.piwheels.org/simple/phynetpy/PhyNetPy-0.0.3-py3-none-any.whl#sha256=daaf000f384f301addcda39f19569d5dab0097cdd8603085af86618ab61ab0a2 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-20T18:48:51,170 Skipping link: not a file: https://www.piwheels.org/simple/phynetpy/ 2023-07-20T18:48:51,170 Skipping link: not a file: https://pypi.org/simple/phynetpy/ 2023-07-20T18:48:51,187 Given no hashes to check 1 links for project 'phynetpy': discarding no candidates 2023-07-20T18:48:51,204 Collecting phynetpy==0.0.7 2023-07-20T18:48:51,206 Created temporary directory: /tmp/pip-unpack-b19pwx32 2023-07-20T18:48:51,337 Downloading PhyNetPy-0.0.7.tar.gz (74 kB) 2023-07-20T18:48:51,435 Added phynetpy==0.0.7 from https://files.pythonhosted.org/packages/12/5a/4771d05caf1f35a2bed8a225f0d0e5451d92ca18b69b5f38840265b5fd66/PhyNetPy-0.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-dx6d8exe' 2023-07-20T18:48:51,439 Created temporary directory: /tmp/pip-build-env-fmkxnfu9 2023-07-20T18:48:51,449 Installing build dependencies: started 2023-07-20T18:48:51,451 Running command pip subprocess to install build dependencies 2023-07-20T18:48:52,641 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-20T18:48:53,001 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-20T18:48:54,641 Collecting setuptools>=61.0.0 2023-07-20T18:48:54,711 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-20T18:48:54,967 Collecting wheel 2023-07-20T18:48:54,985 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-07-20T18:48:56,774 Installing collected packages: wheel, setuptools 2023-07-20T18:48:56,994 Creating /tmp/pip-build-env-fmkxnfu9/overlay/bin 2023-07-20T18:48:56,996 changing mode of /tmp/pip-build-env-fmkxnfu9/overlay/bin/wheel to 755 2023-07-20T18:48:59,078 Successfully installed setuptools-68.0.0 wheel-0.40.0 2023-07-20T18:48:59,089 [notice] A new release of pip is available: 23.1.2 -> 23.2 2023-07-20T18:48:59,090 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-20T18:48:59,341 Installing build dependencies: finished with status 'done' 2023-07-20T18:48:59,346 Getting requirements to build wheel: started 2023-07-20T18:48:59,347 Running command Getting requirements to build wheel 2023-07-20T18:48:59,957 running egg_info 2023-07-20T18:48:59,961 writing src/PhyNetPy.egg-info/PKG-INFO 2023-07-20T18:48:59,963 writing dependency_links to src/PhyNetPy.egg-info/dependency_links.txt 2023-07-20T18:48:59,965 writing requirements to src/PhyNetPy.egg-info/requires.txt 2023-07-20T18:48:59,967 writing top-level names to src/PhyNetPy.egg-info/top_level.txt 2023-07-20T18:48:59,986 reading manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:48:59,988 adding license file 'LICENSE' 2023-07-20T18:48:59,991 writing manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:49:00,052 Getting requirements to build wheel: finished with status 'done' 2023-07-20T18:49:00,061 Created temporary directory: /tmp/pip-modern-metadata-hdue2cn6 2023-07-20T18:49:00,063 Preparing metadata (pyproject.toml): started 2023-07-20T18:49:00,064 Running command Preparing metadata (pyproject.toml) 2023-07-20T18:49:00,591 running dist_info 2023-07-20T18:49:00,607 creating /tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info 2023-07-20T18:49:00,611 writing /tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/PKG-INFO 2023-07-20T18:49:00,614 writing dependency_links to /tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/dependency_links.txt 2023-07-20T18:49:00,616 writing requirements to /tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/requires.txt 2023-07-20T18:49:00,617 writing top-level names to /tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/top_level.txt 2023-07-20T18:49:00,618 writing manifest file '/tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:49:00,638 reading manifest file '/tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:49:00,640 adding license file 'LICENSE' 2023-07-20T18:49:00,643 writing manifest file '/tmp/pip-modern-metadata-hdue2cn6/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:49:00,644 creating '/tmp/pip-modern-metadata-hdue2cn6/PhyNetPy-0.0.7.dist-info' 2023-07-20T18:49:00,802 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-20T18:49:00,808 Source in /tmp/pip-wheel-sooxda1j/phynetpy_57d8aa2676e0403aba9e0cf50703e766 has version 0.0.7, which satisfies requirement phynetpy==0.0.7 from https://files.pythonhosted.org/packages/12/5a/4771d05caf1f35a2bed8a225f0d0e5451d92ca18b69b5f38840265b5fd66/PhyNetPy-0.0.7.tar.gz 2023-07-20T18:49:00,809 Removed phynetpy==0.0.7 from https://files.pythonhosted.org/packages/12/5a/4771d05caf1f35a2bed8a225f0d0e5451d92ca18b69b5f38840265b5fd66/PhyNetPy-0.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-dx6d8exe' 2023-07-20T18:49:00,815 Created temporary directory: /tmp/pip-unpack-b43ndm8_ 2023-07-20T18:49:00,815 Building wheels for collected packages: phynetpy 2023-07-20T18:49:00,819 Created temporary directory: /tmp/pip-wheel-064b4rz_ 2023-07-20T18:49:00,819 Destination directory: /tmp/pip-wheel-064b4rz_ 2023-07-20T18:49:00,822 Building wheel for phynetpy (pyproject.toml): started 2023-07-20T18:49:00,822 Running command Building wheel for phynetpy (pyproject.toml) 2023-07-20T18:49:01,390 running bdist_wheel 2023-07-20T18:49:01,422 running build 2023-07-20T18:49:01,422 running build_py 2023-07-20T18:49:01,430 creating build 2023-07-20T18:49:01,431 creating build/lib 2023-07-20T18:49:01,431 creating build/lib/PhyNetPy 2023-07-20T18:49:01,432 copying src/PhyNetPy/Newick.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,434 copying src/PhyNetPy/GTR.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,436 copying src/PhyNetPy/NetworkParser.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,438 copying src/PhyNetPy/Matrix.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,440 copying src/PhyNetPy/PhyAllop.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,443 copying src/PhyNetPy/Node.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,445 copying src/PhyNetPy/GeneTrees.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,447 copying src/PhyNetPy/Move.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,449 copying src/PhyNetPy/ModelGraph.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,452 copying src/PhyNetPy/PhySNP.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,455 copying src/PhyNetPy/MSA.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,457 copying src/PhyNetPy/GTR2.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,459 copying src/PhyNetPy/BirthDeath.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,461 copying src/PhyNetPy/Graph.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,463 copying src/PhyNetPy/SequenceSim.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,465 copying src/PhyNetPy/ModelFactory.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,467 copying src/PhyNetPy/__init__.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,468 copying src/PhyNetPy/Alphabet.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,470 copying src/PhyNetPy/State.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,472 copying src/PhyNetPy/MetropolisHastings.py -> build/lib/PhyNetPy 2023-07-20T18:49:01,474 running egg_info 2023-07-20T18:49:01,490 writing src/PhyNetPy.egg-info/PKG-INFO 2023-07-20T18:49:01,491 writing dependency_links to src/PhyNetPy.egg-info/dependency_links.txt 2023-07-20T18:49:01,493 writing requirements to src/PhyNetPy.egg-info/requires.txt 2023-07-20T18:49:01,494 writing top-level names to src/PhyNetPy.egg-info/top_level.txt 2023-07-20T18:49:01,502 reading manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:49:01,504 adding license file 'LICENSE' 2023-07-20T18:49:01,507 writing manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-20T18:49:01,523 installing to build/bdist.linux-armv7l/wheel 2023-07-20T18:49:01,524 running install 2023-07-20T18:49:01,549 running install_lib 2023-07-20T18:49:01,555 creating build/bdist.linux-armv7l 2023-07-20T18:49:01,556 creating build/bdist.linux-armv7l/wheel 2023-07-20T18:49:01,558 creating build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,559 copying build/lib/PhyNetPy/Newick.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,560 copying build/lib/PhyNetPy/GTR.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,562 copying build/lib/PhyNetPy/NetworkParser.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,565 copying build/lib/PhyNetPy/Matrix.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,567 copying build/lib/PhyNetPy/PhyAllop.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,571 copying build/lib/PhyNetPy/Node.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,573 copying build/lib/PhyNetPy/GeneTrees.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,575 copying build/lib/PhyNetPy/Move.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,578 copying build/lib/PhyNetPy/ModelGraph.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,581 copying build/lib/PhyNetPy/PhySNP.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,584 copying build/lib/PhyNetPy/MSA.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,586 copying build/lib/PhyNetPy/GTR2.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,588 copying build/lib/PhyNetPy/BirthDeath.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,590 copying build/lib/PhyNetPy/Graph.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,593 copying build/lib/PhyNetPy/SequenceSim.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,595 copying build/lib/PhyNetPy/ModelFactory.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,597 copying build/lib/PhyNetPy/__init__.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,598 copying build/lib/PhyNetPy/Alphabet.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,600 copying build/lib/PhyNetPy/State.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,601 copying build/lib/PhyNetPy/MetropolisHastings.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-20T18:49:01,603 running install_egg_info 2023-07-20T18:49:01,614 Copying src/PhyNetPy.egg-info to build/bdist.linux-armv7l/wheel/PhyNetPy-0.0.7-py3.9.egg-info 2023-07-20T18:49:01,624 running install_scripts 2023-07-20T18:49:01,640 creating build/bdist.linux-armv7l/wheel/PhyNetPy-0.0.7.dist-info/WHEEL 2023-07-20T18:49:01,643 creating '/tmp/pip-wheel-064b4rz_/.tmp-6mj4695f/PhyNetPy-0.0.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-20T18:49:01,646 adding 'PhyNetPy/Alphabet.py' 2023-07-20T18:49:01,649 adding 'PhyNetPy/BirthDeath.py' 2023-07-20T18:49:01,650 adding 'PhyNetPy/GTR.py' 2023-07-20T18:49:01,652 adding 'PhyNetPy/GTR2.py' 2023-07-20T18:49:01,653 adding 'PhyNetPy/GeneTrees.py' 2023-07-20T18:49:01,657 adding 'PhyNetPy/Graph.py' 2023-07-20T18:49:01,659 adding 'PhyNetPy/MSA.py' 2023-07-20T18:49:01,661 adding 'PhyNetPy/Matrix.py' 2023-07-20T18:49:01,663 adding 'PhyNetPy/MetropolisHastings.py' 2023-07-20T18:49:01,665 adding 'PhyNetPy/ModelFactory.py' 2023-07-20T18:49:01,672 adding 'PhyNetPy/ModelGraph.py' 2023-07-20T18:49:01,677 adding 'PhyNetPy/Move.py' 2023-07-20T18:49:01,679 adding 'PhyNetPy/NetworkParser.py' 2023-07-20T18:49:01,681 adding 'PhyNetPy/Newick.py' 2023-07-20T18:49:01,682 adding 'PhyNetPy/Node.py' 2023-07-20T18:49:01,688 adding 'PhyNetPy/PhyAllop.py' 2023-07-20T18:49:01,692 adding 'PhyNetPy/PhySNP.py' 2023-07-20T18:49:01,693 adding 'PhyNetPy/SequenceSim.py' 2023-07-20T18:49:01,695 adding 'PhyNetPy/State.py' 2023-07-20T18:49:01,696 adding 'PhyNetPy/__init__.py' 2023-07-20T18:49:01,698 adding 'PhyNetPy-0.0.7.dist-info/LICENSE' 2023-07-20T18:49:01,699 adding 'PhyNetPy-0.0.7.dist-info/METADATA' 2023-07-20T18:49:01,700 adding 'PhyNetPy-0.0.7.dist-info/WHEEL' 2023-07-20T18:49:01,701 adding 'PhyNetPy-0.0.7.dist-info/top_level.txt' 2023-07-20T18:49:01,702 adding 'PhyNetPy-0.0.7.dist-info/zip-safe' 2023-07-20T18:49:01,703 adding 'PhyNetPy-0.0.7.dist-info/RECORD' 2023-07-20T18:49:01,706 removing build/bdist.linux-armv7l/wheel 2023-07-20T18:49:01,787 Building wheel for phynetpy (pyproject.toml): finished with status 'done' 2023-07-20T18:49:01,794 Created wheel for phynetpy: filename=PhyNetPy-0.0.7-py3-none-any.whl size=82441 sha256=9b8c80272af518d16582a09c6dbf183f3c50c7bda7481812461144ccbfdb6702 2023-07-20T18:49:01,795 Stored in directory: /tmp/pip-ephem-wheel-cache-53e14nfv/wheels/00/e1/e6/c7eef0baae26327fc359448494f6c6de050686b7b63068b2b0 2023-07-20T18:49:01,806 Successfully built phynetpy 2023-07-20T18:49:01,811 Removed build tracker: '/tmp/pip-build-tracker-dx6d8exe'