2023-07-21T09:24:17,231 Created temporary directory: /tmp/pip-build-tracker-9lfm4jkx 2023-07-21T09:24:17,232 Initialized build tracking at /tmp/pip-build-tracker-9lfm4jkx 2023-07-21T09:24:17,232 Created build tracker: /tmp/pip-build-tracker-9lfm4jkx 2023-07-21T09:24:17,232 Entered build tracker: /tmp/pip-build-tracker-9lfm4jkx 2023-07-21T09:24:17,233 Created temporary directory: /tmp/pip-wheel-pl11rb2f 2023-07-21T09:24:17,236 Created temporary directory: /tmp/pip-ephem-wheel-cache-foc5fqj6 2023-07-21T09:24:17,262 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-21T09:24:17,265 2 location(s) to search for versions of trisicell: 2023-07-21T09:24:17,265 * https://pypi.org/simple/trisicell/ 2023-07-21T09:24:17,265 * https://www.piwheels.org/simple/trisicell/ 2023-07-21T09:24:17,266 Fetching project page and analyzing links: https://pypi.org/simple/trisicell/ 2023-07-21T09:24:17,266 Getting page https://pypi.org/simple/trisicell/ 2023-07-21T09:24:17,268 Found index url https://pypi.org/simple/ 2023-07-21T09:24:17,324 Fetched page https://pypi.org/simple/trisicell/ as application/vnd.pypi.simple.v1+json 2023-07-21T09:24:17,371 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d3/b8/2950fd2454a806fc4e752550f3a1e904c28b64cd00b2e3ee256347d0bf3e/trisicell-0.0.1-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,371 Found link https://files.pythonhosted.org/packages/0f/77/31db547e742846df730f8781d49cc48ff7bd57e693f72b0395d30a6829c3/trisicell-0.0.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.1 2023-07-21T09:24:17,372 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fa/b2/6fb0a205be456eb6fbcfc6c5b083c4f6d956632c21a34ffaa18b36c9fe76/trisicell-0.0.2-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,372 Found link https://files.pythonhosted.org/packages/ce/b5/21b4e3824519dc1a88b1739b340f38af88b62eecfc9b5aa9cd7677df48a9/trisicell-0.0.2.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.2 2023-07-21T09:24:17,372 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/86/35/557a32884b5081d4645717d2d73bda6c75f7fde6f4f7511d74a7323a8a3e/trisicell-0.0.3-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,373 Found link https://files.pythonhosted.org/packages/fe/42/67954c24d7ff4c671b56f453c80b4e16802763c1d6995ff92afb7fd31218/trisicell-0.0.3.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.3 2023-07-21T09:24:17,373 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/43/f2/e79dcc28e0095e1c808c1250cd9c6878a025ed842cb2f552099dfc0e75e1/trisicell-0.0.4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,373 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e1/6b/2cde12b1c4a1e4e4c700fe1cb6381bfa45fd88dcaff9a8a11a466499d3a4/trisicell-0.0.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,374 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/52/77/f576fe4f1d51a1c25a0b48fca809994e32ba23fc97cdf7d46bce3d25a753/trisicell-0.0.6-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,374 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/5e/4d/9c8b5d9e3b215cc96eedc5e26653435d9b3672c6cfb550d4bb2c00d7b356/trisicell-0.0.7-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,374 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f6/14/06ed20f29289c004db1b2199ff3d16f6af748015fe9ea2f7359cfb15a77d/trisicell-0.0.8-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,374 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9d/31/2ba8d94d342b4ae52a741c024748302eaa5470e8016d6229ae8d70303805/trisicell-0.0.9-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,374 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/95/4a/2f93780b7f99a6d374aaf6e2683c88ae2816664461694bb1053a02d8ab2d/trisicell-0.0.10-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,375 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d7/c8/3955d678890b02ce13119cbfbd8845d0b4697f8011c049c4708f77c217fa/trisicell-0.0.10-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,375 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/15/fc/8c9ccb70b5bc5f772bf1ed47fb5a69f57c9366c3080eb51bc1ffe179395c/trisicell-0.0.10-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,375 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/37/40a4dc368c6c9fe0e5322ef68de70fe2f82052acd7c4f86e78809b204d9d/trisicell-0.0.10-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,375 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/ce/21f6ba6ea18fe75c6bdc3bdef8b738e9e38d8410f97acecc31f1c34a1ea6/trisicell-0.0.10-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,375 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b3/88/2818eaaefda0fe41d7d9244c3baa10826c2a816b61853c35b76c2ea0cf08/trisicell-0.0.10-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,376 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3d/54/dd8fd80a1519d5d2b61be06976dc83ecb4a313c67222784979b4dd4562a3/trisicell-0.0.10-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,376 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d0/f7/71587b93fd9a862b23b593d68981164c462cbc171e8f83396694a69f66ad/trisicell-0.0.10-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,376 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e6/e3/4d22c1afbf3984957aa19ff3d552e0daa89c560a48b12691d12600efd7e6/trisicell-0.0.10-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,376 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f4/57/dc75865dfa7f68ce1ecc5da762ea64e716c2992ee3c091ae049c0afbab76/trisicell-0.0.10-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,376 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0b/5c/25cb5b003df9264665bf20eab56e654f35a5352f581e54d2fee83c85a0e8/trisicell-0.0.10-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,377 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b5/ac/1ffd83c0cdb49aae3e2407de9b988b11ab36fda097faf5cf33ac21649812/trisicell-0.0.10-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,377 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1e/af/dbdafefd2bd2ae816e1945b9195b30c0c54785f8122fc9d664531b590e7c/trisicell-0.0.10-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,377 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/96/41/2b2b17f0b7bb66ababb403d1132a69115e1d25357f20e388b66d1b4a84dd/trisicell-0.0.10-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,377 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9b/7f/5cac564f5e251b071fa271e4c0549c8b001ddd1a31fd7ab3bd319c55e429/trisicell-0.0.10-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,378 Found link https://files.pythonhosted.org/packages/be/35/77379d91c1ed8566f2692c3086936d1eec091a6ee37244e152e2d31e3d5c/trisicell-0.0.10.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.10 2023-07-21T09:24:17,378 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/39/9b/c6f63cfede491173af4570a3a8adb0b23e5db82963b3b3a49a12096e8727/trisicell-0.0.11-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,378 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/4b/ff3d54872b512626d17e9e1309e53a78ecc0dcfdae338372501bb974348a/trisicell-0.0.11-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,378 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/25/9d/e6175c0845bf72aee1d3a871f99fd0512df522d2076714c1271db43b1a98/trisicell-0.0.11-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,379 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/91/37/b6772ee6c1913db7797b17dfe25b925f664f23c964c17d5386cad2e15974/trisicell-0.0.11-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,379 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f3/14/6bc32344227b4b18a9e4e4f46d705e81c89c21d33be921845b407581d8f1/trisicell-0.0.11-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,379 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1b/3c/0ba95413a931207f805fb98c773ad42df37ef563b4303b53e674f81da3ae/trisicell-0.0.11-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,379 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/b2/50/0923287bd9d9e77601d7aad9bed1fe1e800f3a146b22537b10199f19b84d/trisicell-0.0.11-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,380 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a5/45/acafa55914adb8ce819bf0414bb58a84046535ac53c200ec6fc30684d1b4/trisicell-0.0.11-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,380 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3a/f6/0ddcd1f79c438237935a58553f896f51b87852330303eba37f8091f30820/trisicell-0.0.11-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,380 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7b/63/108215b1ee9a07a503f3889a146c21fcb1a0216d0a9c9ee4a4ac58403335/trisicell-0.0.11-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,381 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ac/c7/cf4987e84c512495fcfd776fa3295e9c9c3bd27e0c5b47e9d1c727318b4d/trisicell-0.0.11-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,381 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ee/88/c4f3a4b20d01daec3dbc9bc150e10420a84e0f6737f8b8f1566116d70651/trisicell-0.0.11-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,381 Found link https://files.pythonhosted.org/packages/eb/2a/a163038e304553b5a43b7532fe6093486d48eada442e7efdc944b67b8cb6/trisicell-0.0.11.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.11 2023-07-21T09:24:17,382 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/4f/3fb4123f6e54a0e55759cd13a3ac5bad7329e0f12db6e1fefd5df5c50c02/trisicell-0.0.12-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,382 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b1/ef/fc937cc8002bdb83627ee72d573aaeadd0c1fdd3193f7d975acd022d51c6/trisicell-0.0.12-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,382 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/31/1f/6be51d3dbe2fc8c8bebcf9d3ef65bbc0eb032e2a6cae295d8b6ba90765c7/trisicell-0.0.12-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,382 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/a1/cbecb821708867f74b50850da19a73c6bd5f76ba9515e3c438f46dcba55a/trisicell-0.0.12-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,383 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d7/e5/c4c150f5efca3f50a7616e13264b54646b3ffa33814c7aa3600ebceae4d1/trisicell-0.0.12-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,383 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/2d/55edfcefb69b65b51fda5bcc4f35dff8e3d3bc9b635d06db52ebc5de0285/trisicell-0.0.12-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,383 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0f/56/1b51c8351499be210b2796341f52d6df8775993dc52f306403d734a295b8/trisicell-0.0.12-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,383 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7e/f8/d4bf1c3bc2d61c0fdf4517ee957710c901fb76185db17e971c0861bda284/trisicell-0.0.12-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,383 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1c/7c/faccfe894e56285406078ebc6b41aec43dc494813c28382277355bf9ee24/trisicell-0.0.12-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,384 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/dc/c3/6d40f602bf437f538e88dff4b954c4d68c2bce613e0ec7317afdc816ebd8/trisicell-0.0.12-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,384 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/80/f4/bd2b84a751e40c872e238094e51469feb02657fa518236a45793dd782d8e/trisicell-0.0.12-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,384 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/2c/17e9aed816b843dbdc618f82f319b4f8f0e7eb6314f379fb041afab061b3/trisicell-0.0.12-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,384 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/12/c5/e45f81f8e73901115c192f3fe34b5cae11ed6ab3d39e51153780b2a180e0/trisicell-0.0.12-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,384 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e0/88/82561e771a63dcfdecbb2b53c03ad596a906d678dac3a191a16688f9c0af/trisicell-0.0.12-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,384 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3a/7b/e9826627d69511e5882ca953a9e4a59a41802c6fe996f6e4da7804051962/trisicell-0.0.12-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,385 Found link https://files.pythonhosted.org/packages/c7/e1/ade053876eb2b0fdb9ef2a4f42f18b2403471a9b26cf899cba463043bdb7/trisicell-0.0.12.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.12 2023-07-21T09:24:17,385 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ab/e5/6fd6cbb639907d603cfdaa19ee4302399dd6cc8ab1132b9f7ca1cbf8ebdf/trisicell-0.0.13-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,385 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/20/0f/1fcaf044125497e9bbaa104a4633a471526da27ba8dfc99287cd43ef9ea6/trisicell-0.0.13-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,386 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fa/88/b0954c49e4b3a57bdf6c16432d57c53ea3bb9e2167f8d740b48a654934b7/trisicell-0.0.13-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,386 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/91/c9f37b1e697162e05de9d4fe3f6b8618f64fc449b97039c6a3ecabe2bf0a/trisicell-0.0.13-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,386 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6b/1d/c7f96ba029d9245c41f01ed94e2adb4cb5b882b24cc08d5ef494dbab2861/trisicell-0.0.13-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,386 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e8/54/fb79653e635e525df834f961f12c0c7f2c9b74b8265bbe7e8431cc267c3f/trisicell-0.0.13-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,386 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7c/04/1adecb721dfb5995fbb5807098a2ceaf82a6dc3ee4ee818399459bd0b2bc/trisicell-0.0.13-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,387 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a8/a9/d6ef576afd5e0f65d24f8013768e78be3fc7780bc0e00484c2500086b649/trisicell-0.0.13-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,387 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/c3/35256eb61e23e18be49b406017c61201c4151d605cb989cd60200fc14d10/trisicell-0.0.13-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,387 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/27/67/6fd1cdd66a7bb1c0023584ebdb19fe6493ebdd9f33f66be490eeb93efe2c/trisicell-0.0.13-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,387 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/04/27/9a6c31bc224f97a234a6fed633ea70838b1be42dba389b8bcf4e28d99ebd/trisicell-0.0.13-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,388 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/13/7de9b8204e69c845e12a4d5cb8bc013353e2ddec809d64f3dce801c4ab5d/trisicell-0.0.13-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,389 Found link https://files.pythonhosted.org/packages/10/c6/dec3a854615f1d75f90854c1e27c401d931f1c854f24bfabffcb7b73373a/trisicell-0.0.13.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.13 2023-07-21T09:24:17,389 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ef/1c/413c65088f586d97b3dafaad37e64223a31f0ca44ff1dd6ae98db6b92baf/trisicell-0.0.14-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,389 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/48/95/2976bc1892dcefadbef6ac9f3f57e8038b5d42b3253e3af527e4c1fcb9b6/trisicell-0.0.14-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,389 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9d/39/aa9dbdafcb926cbcbc3533d9084381508992d8d5de95e1e02187aae32286/trisicell-0.0.14-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,389 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e8/de/e655fd94bb81211ca0dda328181652b426833fffe3127a0ed9e39509e4a4/trisicell-0.0.14-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,390 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/07/17/f62fda80d2ce11c48d73cfc673926d1f78ce9c547b396481d70ffaf0a4aa/trisicell-0.0.14-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,390 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/05/23/d318e2415338aa1910d79b6d5f468903df4831474251aa8266229cc4a319/trisicell-0.0.14-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,390 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/96/b4/2315f07e590ed7dd0c489a4a7ed0b101099192629a2ec3ae2b937cab0918/trisicell-0.0.14.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.14 2023-07-21T09:24:17,392 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/af/08/cb80b06db6765ecad6479ed30e8ecf9159bbf3778dedb614fc0846dda264/trisicell-0.0.15-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,393 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/33/03a174d81c58e8a719888629de16b89e8b365b2d030beab5306538e4de49/trisicell-0.0.15-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,393 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/b9/698c67ae9194ebb50148963fdc2740ad07e8b9775ffa49a2c2f77186cf19/trisicell-0.0.15-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,393 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/3e/c41835cb89d53b4952552796cc5f2827c6950f6c3934e8d648e3f1ff5605/trisicell-0.0.15-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,393 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/26/f4/42172fde474a5dcce1a06e9be79fcdfa9e28229289e1b67403159894ea9e/trisicell-0.0.15-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,393 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/c7/98/1ebae14aa5be3b1c97aff53a647c7d3c210129a00058c8c53ccaefcd8554/trisicell-0.0.15-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,394 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/49/30/7043332c770a9ea0f6de404ff7207997eb63e9235bc3d94df875adec6275/trisicell-0.0.15-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,394 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/5d/01/927e0e5d3f799adefe2eef3958d188c1d5fb64e9985b3ec61d6f25ee1887/trisicell-0.0.15-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,395 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/68/60/32ab36da479a3a5dbe3fed6940cbcb04ec2a37821cf74bc888ef8b83bd74/trisicell-0.0.15-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,395 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0d/5b/e0fed4825a2ca741be71ee2abbb993e33a91ea56319d04b474392b1ab310/trisicell-0.0.15-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,395 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/56/19/162c9241acabd2705cc5c2cc9ba6291ce71add4cda2286ed08f31d6d93d3/trisicell-0.0.15-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,395 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1e/74/e59316d78a645710e28f41a0a286d4d712b517bf64a01bb543d40b9c67e7/trisicell-0.0.15-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,396 Found link https://files.pythonhosted.org/packages/09/51/b71422ae4bfc6904bc6197b9a0ba7b00873719306e27f8d549ea713a2eb4/trisicell-0.0.15.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.15 2023-07-21T09:24:17,396 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ba/ef/b141bb5e6beaf5d3f40aa0f47e5f58c4a3616f26f6b439d416c4a22c71e6/trisicell-0.0.17-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,396 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ce/bb/a84f280257973126cabf750f512aad66408f3ffc8eda178900d687902160/trisicell-0.0.17-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,396 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d9/8b/26e7b6fe7c9f0a801b9560f64ffa9d281bcb38252ca1e56df50c1fd34c8b/trisicell-0.0.17-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,396 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/47/d2/61987600a45df1b54af4c54b6c6ee808f9178103bbde24d89003378e6bb4/trisicell-0.0.17-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,397 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f9/0a/79294e867f4db48e0b382c39fb76360b77ec467eff09de99e7b772aedb7a/trisicell-0.0.17-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,397 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/c6/670c6154db038cf35e6e1ced5ebce4dcdc3b8a47103d042becde5b63bc78/trisicell-0.0.17-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,397 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/8b/7f/8c576ba6a21ff37ea84af2dd20e47edf0965dd82dfd88ee3717071d25dad/trisicell-0.0.17-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,397 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/f3/29/bffe7f588eca7168fd896e27d8f36a57c19caeb31469a34f3bfe7dd5de9c/trisicell-0.0.17-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,398 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/37/7765ac505e8d76a21adbcedf6830abd6c074c0c4dd694621ec3b959afa0b/trisicell-0.0.17-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,398 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c9/b3/8be886c5602d9719f47eca15a0093147649424da89bdf5034afa799a39d8/trisicell-0.0.17-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,398 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d5/3e/b4d8e5e2b1ab9d81c0b9e09ace7cf2e822b2aad41824555c57255c331c37/trisicell-0.0.17-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,399 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fe/5b/281df62e3fd3a2427e173491695f1e53c86fc342c0af967025f6c497f5a0/trisicell-0.0.17-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,399 Found link https://files.pythonhosted.org/packages/8f/50/417a46ad6591aba07b8fbe81b15cae4dd35343d3524c2a150c824124b501/trisicell-0.0.17.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.17 2023-07-21T09:24:17,399 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/29/4e/5d083ebef8d7a8a73abc2991bc4f941b90faf5ab0e3bf1e45a8163a86473/trisicell-0.0.18-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,400 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/c1/52e9474e3f93bcf3424676c74c0844502cf2a4c52fdf36e6c746b9a1b3db/trisicell-0.0.18-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,400 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/bc/84692f18c164186b3b3c5f4c095ee289d6252d4c4253c188aa153c5514d1/trisicell-0.0.18-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,400 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/1e/1e/46b6dd9d3dfa063b03fe440d8419bb254ba347b9d6a6ed62036e21e70019/trisicell-0.0.18.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.18 2023-07-21T09:24:17,403 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d3/4f/d93614ac82e5b5edb63a95e8c9e75c98dea3ee346acaf16618f199f3301b/trisicell-0.0.19-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,403 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/89/cf976eb9b0ca028734e266cb632aa99170bcf964f1de41067c6051ede1ad/trisicell-0.0.19-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,403 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/83/01/7e365bc970805f0112341d214e9ceb6c3730ea123f466189cbe7282d0b08/trisicell-0.0.19-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,404 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/ff/f430af3b04d9850bb3c4676740bb8c0d12cd88e91aa97e78f5801ee30105/trisicell-0.0.19-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,404 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/22/7730486ef2001bbf8dd62950dc964176ca7c176f43ca790b652ad0d4e747/trisicell-0.0.19-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,404 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/92/32/a9558d6f6a9291e6cd95172849256e14c9997eb4ad60a82eb95615a5cdec/trisicell-0.0.19-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,405 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/eb/64/612915a71230c697a44a8835e1ddbad0ddfedfc882acbe5308570b727acb/trisicell-0.0.19-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,405 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2e/36/08d36f74261352be966a34ccb39f6fd23f4eb5fdbad3bdb5597226ed8f87/trisicell-0.0.19-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,405 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/79/279867ef139fa30bccb78f170ccdec30beebfb9746c7b5618fba1dd853b0/trisicell-0.0.19-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,405 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/72/d2/6460afb8eb78ac836faa1dfb4968dbd6fb28fe95c964ef3467e8b2da31ba/trisicell-0.0.19-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,405 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/66/00/8aee47eed339815441421aa74c44ffd9656cf6eb3644a4b6049fd2f154b9/trisicell-0.0.19-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,406 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ae/50/e671e71bda08d505e833d3b3257ca5ad0843365908660ee2f853e8de28b7/trisicell-0.0.19-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,406 Found link https://files.pythonhosted.org/packages/7f/8a/b21a4b088399b772c0d96379d71aec538e74da32131cf383c8903ca4b587/trisicell-0.0.19.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.19 2023-07-21T09:24:17,406 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/0e/f7622188c509b0bb7e8518b3a641c71c42d6c920dfa21d8a6f8d02668d9b/trisicell-0.0.20-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,407 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/85/ae/6a8a9c4b00b76c56ed29cad1bc15d6ad0579db4641dd0e3bed94e4af4f47/trisicell-0.0.20-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,407 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/bc/d5/f537f767ef0d300a60c99917b2a126e5c6e26fcc1a2f57a538ab98d5c1e7/trisicell-0.0.20-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,407 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/78/cc/d561d90e65c511fab3fb83c568c2a7435de0a795384e596b616d1ad2c456/trisicell-0.0.20-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,407 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/90/63/239bd4268a11e41aca96d5bee3a8d1f11a00a2d8f33e985a0bb16ee4c5a3/trisicell-0.0.20-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,407 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4b/ca/bfac2fbaa3d2d4d094c015c9e590ce8032a11973b62dd176e439c2ee8ce8/trisicell-0.0.20-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,408 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9c/cd/a811ef434301ef4af12de370f4a8af22d99b64b84cb62cbb7613584f1043/trisicell-0.0.20-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,408 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/40/17/b3abf3ab533d0bf6fd93bfd02ae9a55a7a4b5b19eb3f47069ed938b91697/trisicell-0.0.20-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,408 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/12/47/57725061d474ac4e36ca25ad288060de1da9910b156e0ad325602e9c6b0e/trisicell-0.0.20-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,408 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ca/06/247d875e24eda93a9ba980b2712e8af71cb7b6b99627a35cf4f872087af7/trisicell-0.0.20-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,408 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/80/50/a0e1fe6bff27cdfc657b06ca51df5260f7b64c490251a85cf1fcb02d561a/trisicell-0.0.20-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,409 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6e/24/e0d9527cf63ef663dd39cb05add63e511267697e45e73d086bdbf6020512/trisicell-0.0.20-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,409 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2f/93/fe11b90918a4209cddf61733e2c7045280a75a361d8030bb42f6822c1847/trisicell-0.0.20-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,409 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/66/fa/0cf1cbaabd9df2848cdc43014f875221f556bb10ccf96bc33032df736f0e/trisicell-0.0.20-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,409 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/e9/0a905a07667b2b284273601fe852ccd5098d7afa280e5f800d0488bba2e9/trisicell-0.0.20-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,410 Found link https://files.pythonhosted.org/packages/80/8f/5cd6e2543aa53fe39919c80fd76173bdb37cb178699120546b316119f78b/trisicell-0.0.20.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.20 2023-07-21T09:24:17,410 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/33/49/a197eaa50f21fe8410cdc124c190335e7be5ff686492601eb1f7261c7979/trisicell-0.0.21-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,410 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f8/97/570fd2f9a575ab00909f9664487b62843e31372b9733aa367e2186649554/trisicell-0.0.21-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,410 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7e/b4/8a70a28c33fb18dd391ad89993da456cf5e652bd0bb29b20b8809c3f8736/trisicell-0.0.21-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,411 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/3c/d2/f4021d6420ebe6e6ce3655a43461d2ef9f47bf6389fcf90e5359628a3bcb/trisicell-0.0.21-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,412 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/97/63/104d853e319bb937681cb15479bd7cbd705e613641c969d1c2a9f1088ba9/trisicell-0.0.21-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,413 Found link https://files.pythonhosted.org/packages/57/75/5e65cdcf0f57a42beb53e2ecbc4af9663f80d16e858deb5e4213cc570633/trisicell-0.0.21.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.21 2023-07-21T09:24:17,413 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/6f/31/1d023987313bb9c3b7a7785ba8299b6a36690c6b2d4b98f7d6776966792e/trisicell-0.1.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,414 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/aa/31/f195be4c965b060b300976551c862a285340db7e62666d0e387d186b7dde/trisicell-0.1.0-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,414 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b9/8c/f89f7913badc6a73423493bdb76178aec8c72f889239f26ecefb43a8736a/trisicell-0.1.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,414 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/eb/1c/4c10230ff77851d054f097723acdf4a66e132aa736cc3c705a727ec6f9e2/trisicell-0.1.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,415 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c4/d3/1bcddcfd3ce3c43ff0fb1b8a433f74f3fecf1c3715b788b6abfebc1086e3/trisicell-0.1.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,415 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0b/ac/56179f89ddd9c3cf3fc6849ffdcb5f35d78de76c840a740dc3511109d985/trisicell-0.1.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,416 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/30/6f/bf5be03efc652f74b1f8524ff18d89cdf29e6164e2f07c4730ae68929558/trisicell-0.1.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,416 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/83/69/e02ad86d1b69212c45eaa10f4d92dffaa8f46d26344a144b21eb00b71a7c/trisicell-0.1.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,416 Found link https://files.pythonhosted.org/packages/66/f0/febc83c6d3ec0b2581b3da2cad09e7aecb4b9c9ef4c514269533d2e24f3d/trisicell-0.1.0.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.1.0 2023-07-21T09:24:17,417 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/76/2e/df06101e7c596b39f42efbc2d883c52ef8c069c4236616b5ffaca4fbc51b/trisicell-0.1.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,417 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4f/f1/1d576151435b04fe1a59e8160b7230a2eeb7c01af7467d0cf6966a2030bc/trisicell-0.1.1-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,417 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/92/f6/58b3e0d2117892fe478bafbe307f45ba525bbcfd4af222aa2ee23dc7e1b6/trisicell-0.1.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,417 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/43/da/ac554aa98e6d36949e35dba0b080b80d216884802c5955af2ab96035270d/trisicell-0.1.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,417 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a9/99/c501629fc32ffe0cc6721a109a91698673642c8917f77d47876c082a6536/trisicell-0.1.1-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,418 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/42/870d340609b3ec20bb6029f2e825a6fa4619a1f074b05fbafe785cd5b0c8/trisicell-0.1.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,418 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/92/4d/812df4542f6d9bb64e3f6229efe41283c1e47c2c09099cb5b951c45224b1/trisicell-0.1.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,418 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4e/bd/a4d65bdf6e6fd9fea41b00263505d0e4709f2afa8ce4c13f6d69ffa551f2/trisicell-0.1.1-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,418 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/25/0c/2b5257c91af04bc2ff9f7c8c769a31a4ba37d872ab832b011c91330795ce/trisicell-0.1.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,418 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f5/69/4e2c1069f4176c48abc5452fa946b7edec6e71bc27975a95fc97f52d983c/trisicell-0.1.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,419 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a0/33/9e5fca7b580212cd645f02095495644af01d68bf4b28c02a599ef79e2e58/trisicell-0.1.1-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,419 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/24/37/13e115551b6163b6f7290c9b54a20fbaff16a16576d58d52491c5029198e/trisicell-0.1.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,419 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d2/d7/a0a7661f69170b4390eac40c9cf532d626aa6db5244b0b476a044e84a8c1/trisicell-0.1.1-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,419 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ab/3a/7fb66a4fce38ef92bbd3dfde25022cfd261cb7180df928eaaf7093be9d08/trisicell-0.1.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,420 Found link https://files.pythonhosted.org/packages/c1/0e/42a8f71f25e956bed0fe923528bc174c2f3410bec48c5e9de48d4d1b8239/trisicell-0.1.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.1.1 2023-07-21T09:24:17,420 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/55/23/e98e6ff0854bc01ce3e2363cab644b2718c3dc6b1120fb5807361798aaa1/trisicell-0.2.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,420 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/82/ed/c2abf4ef2d6fc76275d878d49e08b978cb94bb5215b425c9a2b3f30a30cf/trisicell-0.2.0-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,420 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/27/ef/ce6bfeca92ffb6966100035aa83e32a8498d25eade7b334a6201baeff237/trisicell-0.2.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,421 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/0e/ef/d37a2fd74844f3e75a261710d7825b80702b60fcb3eae9e55a679c166a64/trisicell-0.2.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,422 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/8f/1abd139e25f806beb6686fe91b4e550c15c601242e2ed0589f53e3598051/trisicell-0.2.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,423 Found link https://files.pythonhosted.org/packages/39/7e/3ad7ea1384223067c844d64e75c49c485fa789b8a253ac77588e4e6232bd/trisicell-0.2.0.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.2.0 2023-07-21T09:24:17,423 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/28/5a/c9fb3d16cf010332dd8160cb21447eda7793f0be19c3f615eada68ab241b/trisicell-0.2.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,425 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d6/5d/3bd3c341b41b31c1c11f93cef0d0b2bdabd1c3eeac1385a137b55d552d60/trisicell-0.2.1-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,425 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/68/35/1b0abb114ca9f60bd35fb7144cac2e6d087d95662435d8a58bc6e01de89d/trisicell-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,425 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f1/bd/749862be7d2ef5e670f45b34ffc65c320edc1a4086586861772b0b416bd8/trisicell-0.2.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,425 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/aa/9b/4907f498332acde2ae777543087e8334c2036fa0477db8ccd185c6836ec6/trisicell-0.2.1-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,425 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b1/09/970b9c344cf22f521f8db3f3fd48c6ba001a4989c06a20d28f66141249eb/trisicell-0.2.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,426 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/27/4d/16d97713feb5b22dc403bf4604fddd80de70190501e0bd6e7e810cb6778c/trisicell-0.2.1-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,426 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/99/e5/c3ec3fd9029cd049b352ead5420226f318ab89261b74cd2f0cc0c9e8b0c6/trisicell-0.2.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,426 Found link https://files.pythonhosted.org/packages/38/bc/fc01229c47cd5bd5c5e92134b793f8846fb44fe04654a3ee296125d41973/trisicell-0.2.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.2.1 2023-07-21T09:24:17,427 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/51/c9cbdb5c4ae35e5b829fecd6e63470252b645d6cc301347a08b611ccc0dd/trisicell-0.2.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,427 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e3/0e/0fd6c54fe3a5a332ac5a4cdccf328b9b753518f655ea3baca691d9b8cb80/trisicell-0.2.2-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,427 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c0/d5/5281f3c13ea3cab82a239def3e56f05c004ef253c83886d7dc474b9f774c/trisicell-0.2.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,427 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/31/7a/9d4576a44a96df35f6e9cca10c1385b373cec268de3e525c81695056d9a3/trisicell-0.2.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,427 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f4/76/d23ed76307c87a15e62776579e9ae983cfe034e10f1f7948ad4e717abb74/trisicell-0.2.2-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,428 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0c/fd/82cb2f9badabaa6143a8d2a6b9cf0c65b6e90d432d931a9252cb895cd28f/trisicell-0.2.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,428 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/ca/5c55e2d89a42d1826aa6f0639a4e14c7873359dfad0175e9e4653bd16e96/trisicell-0.2.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,428 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/81/8a/d9e9632700274967ac0bfe8ca58f6ca2386ba5ba7d426ed1f5a044dad8ff/trisicell-0.2.2-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,428 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/8f/55/4180e701bc8ba8027976784b2642ad0d34aa19aa2b21fdd28b81b10c604a/trisicell-0.2.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,428 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c0/03/070d13f5038e3083d88d9acf8f1492868ec29b7773c3bafb073dea4c2883/trisicell-0.2.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,429 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/27/16/99447275dace4687a3c35cf1c6c00633086dd1d8d61b211db389b38d5293/trisicell-0.2.2-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,429 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e8/a3/3c114cfd5d009279f5fd7fecfe2738d57d8bb5723ea0ccaf228a1fb3bb25/trisicell-0.2.2-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,429 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c0/f1/baaaf6f4bc0575b921b43d8ae889b4bc59534ab4b08fcb940a0c1ae5715e/trisicell-0.2.2-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,429 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/de/4f/449d476a0a4c89a7fd6631425832fb6427b2a4fa97d3dfb6d260f41904c0/trisicell-0.2.2-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,430 Found link https://files.pythonhosted.org/packages/49/1b/9117ec01ed1bb7833b1ef3e7652185c6a0e7398a46319035456a9ff3e1be/trisicell-0.2.2.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.2.2 2023-07-21T09:24:17,430 Fetching project page and analyzing links: https://www.piwheels.org/simple/trisicell/ 2023-07-21T09:24:17,430 Getting page https://www.piwheels.org/simple/trisicell/ 2023-07-21T09:24:17,431 Found index url https://www.piwheels.org/simple/ 2023-07-21T09:24:17,596 Fetched page https://www.piwheels.org/simple/trisicell/ as text/html 2023-07-21T09:24:17,608 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.2-cp37-cp37m-linux_armv7l.whl#sha256=12b487ecbdf447c83f728867a761c28c29c00ec396bd80fcb56c04939c38774e (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,608 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.2-cp37-cp37m-linux_armv6l.whl#sha256=12b487ecbdf447c83f728867a761c28c29c00ec396bd80fcb56c04939c38774e (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,608 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.1-cp37-cp37m-linux_armv7l.whl#sha256=0effd32de45e4eedcb280e178b644db93f61e3356766992341c70d3c822d0a7a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,608 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.1-cp37-cp37m-linux_armv6l.whl#sha256=0effd32de45e4eedcb280e178b644db93f61e3356766992341c70d3c822d0a7a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,609 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=00ba5c58632ed9d2f2ebedf98081dbf9f38375b41b8e599a35e1e9132cb4834a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,609 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=00ba5c58632ed9d2f2ebedf98081dbf9f38375b41b8e599a35e1e9132cb4834a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,609 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=597af8a51c727fb20d17b79c98fdc1faa9519e43b90279220543fa65197e056a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,609 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=597af8a51c727fb20d17b79c98fdc1faa9519e43b90279220543fa65197e056a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,609 Skipping link: No binaries permitted for trisicell: 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https://www.piwheels.org/simple/trisicell/trisicell-0.0.14-cp37-cp37m-linux_armv7l.whl#sha256=eca54393ec3f5b01375af2a46f2e5c8e00aaed58dfdacd3582faaa7d023d5d32 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,613 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.14-cp37-cp37m-linux_armv6l.whl#sha256=eca54393ec3f5b01375af2a46f2e5c8e00aaed58dfdacd3582faaa7d023d5d32 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,613 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.13-cp37-cp37m-linux_armv7l.whl#sha256=b538af8cb5159e34fd8aaf08fb00ac3a8ada7be95279ce1565fad68ef8e1f545 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,613 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.13-cp37-cp37m-linux_armv6l.whl#sha256=b538af8cb5159e34fd8aaf08fb00ac3a8ada7be95279ce1565fad68ef8e1f545 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,614 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.12-cp37-cp37m-linux_armv7l.whl#sha256=be47193a781f646cf5d624f2466e56352ae1c0109ae58882df17243b38f741b7 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,614 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.12-cp37-cp37m-linux_armv6l.whl#sha256=be47193a781f646cf5d624f2466e56352ae1c0109ae58882df17243b38f741b7 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,614 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.11-cp37-cp37m-linux_armv7l.whl#sha256=114c2ab469dd69016bd12069f65fa9fe336eca53946100f7cf84d03af6c45ab0 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,614 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.11-cp37-cp37m-linux_armv6l.whl#sha256=114c2ab469dd69016bd12069f65fa9fe336eca53946100f7cf84d03af6c45ab0 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,614 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.10-cp37-cp37m-linux_armv7l.whl#sha256=4f26739081fad7d8eb0337285a5d72579f019cf3ce413af89dc37c17bbfb4bab (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,615 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.10-cp37-cp37m-linux_armv6l.whl#sha256=4f26739081fad7d8eb0337285a5d72579f019cf3ce413af89dc37c17bbfb4bab (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,615 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.3-py3-none-any.whl#sha256=1673dfd550aa8b6f6fbb7ab02f404f6bc0cbc9c8ef6350da9101e756f50d1172 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,615 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.2-py3-none-any.whl#sha256=90e36d6a009270d45a57c8519ffaebd1c79ba4037d2f68abf2d17af9263fcd38 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,615 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.1-py3-none-any.whl#sha256=9bd9a3c4d1224294fe104ca92f349bd257ccb36c21f2210f4fbedb000b0736fc (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2023-07-21T09:24:17,615 Skipping link: not a file: https://www.piwheels.org/simple/trisicell/ 2023-07-21T09:24:17,616 Skipping link: not a file: https://pypi.org/simple/trisicell/ 2023-07-21T09:24:17,635 Given no hashes to check 1 links for project 'trisicell': discarding no candidates 2023-07-21T09:24:17,652 Collecting trisicell==0.2.2 2023-07-21T09:24:17,654 Created temporary directory: /tmp/pip-unpack-e5nk__ir 2023-07-21T09:24:17,702 Downloading trisicell-0.2.2.tar.gz (21.8 MB) 2023-07-21T09:24:20,867 Added trisicell==0.2.2 from https://files.pythonhosted.org/packages/49/1b/9117ec01ed1bb7833b1ef3e7652185c6a0e7398a46319035456a9ff3e1be/trisicell-0.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-9lfm4jkx' 2023-07-21T09:24:20,873 Created temporary directory: /tmp/pip-build-env-lbx8y0bk 2023-07-21T09:24:20,883 Installing build dependencies: started 2023-07-21T09:24:20,884 Running command pip subprocess to install build dependencies 2023-07-21T09:24:22,056 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-21T09:24:22,408 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-21T09:24:24,087 Collecting setuptools 2023-07-21T09:24:24,159 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-21T09:24:24,510 Collecting setuptools_scm 2023-07-21T09:24:24,528 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-07-21T09:24:24,754 Collecting wheel 2023-07-21T09:24:24,774 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-07-21T09:24:26,007 Collecting numpy 2023-07-21T09:24:26,877 Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.1-cp39-cp39-linux_armv7l.whl (12.5 MB) 2023-07-21T09:24:28,759 Collecting Cython 2023-07-21T09:24:29,507 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.0-cp39-cp39-linux_armv7l.whl (10.6 MB) 2023-07-21T09:24:30,199 Collecting packaging>=20.0 (from setuptools_scm) 2023-07-21T09:24:30,216 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-07-21T09:24:30,342 Collecting typing-extensions (from setuptools_scm) 2023-07-21T09:24:30,359 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.7.1-py3-none-any.whl (33 kB) 2023-07-21T09:24:30,474 Collecting tomli>=1.0.0 (from setuptools_scm) 2023-07-21T09:24:30,489 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-07-21T09:24:32,184 Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, numpy, Cython, setuptools_scm 2023-07-21T09:24:32,409 Creating /tmp/pip-build-env-lbx8y0bk/overlay/bin 2023-07-21T09:24:32,411 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/wheel to 755 2023-07-21T09:24:43,346 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/f2py to 755 2023-07-21T09:24:43,349 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/f2py3 to 755 2023-07-21T09:24:43,351 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/f2py3.9 to 755 2023-07-21T09:24:46,730 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/cygdb to 755 2023-07-21T09:24:46,732 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/cython to 755 2023-07-21T09:24:46,734 changing mode of /tmp/pip-build-env-lbx8y0bk/overlay/bin/cythonize to 755 2023-07-21T09:24:46,926 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2023-07-21T09:24:46,926 scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.1 which is incompatible. 2023-07-21T09:24:46,927 Successfully installed Cython-3.0.0 numpy-1.25.1 packaging-23.1 setuptools-68.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.7.1 wheel-0.40.0 2023-07-21T09:24:46,940 [notice] A new release of pip is available: 23.1.2 -> 23.2 2023-07-21T09:24:46,940 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-21T09:24:47,336 Installing build dependencies: finished with status 'done' 2023-07-21T09:24:47,342 Getting requirements to build wheel: started 2023-07-21T09:24:47,343 Running command Getting requirements to build wheel 2023-07-21T09:24:47,929 Getting requirements to build wheel: finished with status 'done' 2023-07-21T09:24:47,941 Created temporary directory: /tmp/pip-modern-metadata-jnwiptix 2023-07-21T09:24:47,944 Preparing metadata (pyproject.toml): started 2023-07-21T09:24:47,946 Running command Preparing metadata (pyproject.toml) 2023-07-21T09:24:48,419 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'email' 2023-07-21T09:24:48,420 warnings.warn(msg) 2023-07-21T09:24:48,561 running dist_info 2023-07-21T09:24:48,581 creating /tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info 2023-07-21T09:24:48,588 writing /tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/PKG-INFO 2023-07-21T09:24:48,590 writing dependency_links to /tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/dependency_links.txt 2023-07-21T09:24:48,592 writing entry points to /tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/entry_points.txt 2023-07-21T09:24:48,593 writing requirements to /tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/requires.txt 2023-07-21T09:24:48,595 writing top-level names to /tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/top_level.txt 2023-07-21T09:24:48,596 writing manifest file '/tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/SOURCES.txt' 2023-07-21T09:24:48,855 listing git files failed - pretending there aren't any 2023-07-21T09:24:48,863 reading manifest file '/tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/SOURCES.txt' 2023-07-21T09:24:48,866 reading manifest template 'MANIFEST.in' 2023-07-21T09:24:48,868 no previously-included directories found matching 'docs' 2023-07-21T09:24:48,869 no previously-included directories found matching '.scripts' 2023-07-21T09:24:48,870 no previously-included directories found matching '.github' 2023-07-21T09:24:48,871 adding license file 'LICENSE' 2023-07-21T09:24:48,878 writing manifest file '/tmp/pip-modern-metadata-jnwiptix/trisicell.egg-info/SOURCES.txt' 2023-07-21T09:24:48,880 creating '/tmp/pip-modern-metadata-jnwiptix/trisicell-0.2.2.dist-info' 2023-07-21T09:24:49,075 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-21T09:24:49,082 Source in /tmp/pip-wheel-pl11rb2f/trisicell_68592207da704ba58bb9a24a178cf53e has version 0.2.2, which satisfies requirement trisicell==0.2.2 from https://files.pythonhosted.org/packages/49/1b/9117ec01ed1bb7833b1ef3e7652185c6a0e7398a46319035456a9ff3e1be/trisicell-0.2.2.tar.gz 2023-07-21T09:24:49,083 Removed trisicell==0.2.2 from https://files.pythonhosted.org/packages/49/1b/9117ec01ed1bb7833b1ef3e7652185c6a0e7398a46319035456a9ff3e1be/trisicell-0.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-9lfm4jkx' 2023-07-21T09:24:49,090 Created temporary directory: /tmp/pip-unpack-einv5_9u 2023-07-21T09:24:49,090 Building wheels for collected packages: trisicell 2023-07-21T09:24:49,095 Created temporary directory: /tmp/pip-wheel-wc1dnrxe 2023-07-21T09:24:49,095 Destination directory: /tmp/pip-wheel-wc1dnrxe 2023-07-21T09:24:49,097 Building wheel for trisicell (pyproject.toml): started 2023-07-21T09:24:49,098 Running command Building wheel for trisicell (pyproject.toml) 2023-07-21T09:24:49,560 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'email' 2023-07-21T09:24:49,561 warnings.warn(msg) 2023-07-21T09:24:49,749 running bdist_wheel 2023-07-21T09:24:49,949 running build 2023-07-21T09:24:49,950 running build_py 2023-07-21T09:24:49,960 creating build 2023-07-21T09:24:49,960 creating build/lib.linux-armv7l-cpython-39 2023-07-21T09:24:49,961 creating build/lib.linux-armv7l-cpython-39/trisicell 2023-07-21T09:24:49,963 copying trisicell/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell 2023-07-21T09:24:49,965 creating build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,966 copying tests/test_tl_scores.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,968 copying tests/test_commands.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,971 copying tests/test_io.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,972 copying tests/test_tl_partition_function.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,974 copying tests/test_pp.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,976 copying tests/test_tl_consensus.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,978 copying tests/test_ul.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,980 copying tests/test_tl_solvers_tmp.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,982 copying tests/__init__.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,983 copying tests/test_datasets.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,985 copying tests/test_tl_solvers.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,987 copying tests/test_logging.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,989 copying tests/test_pl.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,992 copying tests/_helpers.py -> build/lib.linux-armv7l-cpython-39/tests 2023-07-21T09:24:49,994 creating build/lib.linux-armv7l-cpython-39/trisicell/pl 2023-07-21T09:24:49,995 copying trisicell/pl/_helper.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2023-07-21T09:24:49,998 copying trisicell/pl/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2023-07-21T09:24:50,001 copying trisicell/pl/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2023-07-21T09:24:50,003 copying trisicell/pl/_data.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2023-07-21T09:24:50,006 creating build/lib.linux-armv7l-cpython-39/trisicell/settings 2023-07-21T09:24:50,007 copying trisicell/settings/_settings.py -> build/lib.linux-armv7l-cpython-39/trisicell/settings 2023-07-21T09:24:50,009 copying trisicell/settings/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/settings 2023-07-21T09:24:50,011 creating build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,012 copying trisicell/external/_mp3.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,014 copying trisicell/external/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,016 copying trisicell/external/_betabinom.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,020 creating build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,021 copying trisicell/commands/_mcalling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,023 copying trisicell/commands/_scite.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,025 copying trisicell/commands/_partf.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,026 copying trisicell/commands/_huntress.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,028 copying trisicell/commands/trisicell.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,030 copying trisicell/commands/_consensus.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,031 copying trisicell/commands/_phiscs.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,033 copying trisicell/commands/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,035 copying trisicell/commands/_onconem.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,036 copying trisicell/commands/_scistree.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,038 copying trisicell/commands/_search.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,040 copying trisicell/commands/_sphyr.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,042 copying trisicell/commands/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,043 copying trisicell/commands/_score.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,045 copying trisicell/commands/_siclonefit.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,046 copying trisicell/commands/_bnb.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,048 copying trisicell/commands/_gpps.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,050 copying trisicell/commands/_grmt.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,052 copying trisicell/commands/_booster.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2023-07-21T09:24:50,055 creating build/lib.linux-armv7l-cpython-39/trisicell/pp 2023-07-21T09:24:50,056 copying trisicell/pp/_readcount.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2023-07-21T09:24:50,058 copying trisicell/pp/_bifiltering.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2023-07-21T09:24:50,060 copying trisicell/pp/_binary.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2023-07-21T09:24:50,061 copying trisicell/pp/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2023-07-21T09:24:50,063 copying trisicell/pp/_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2023-07-21T09:24:50,065 creating build/lib.linux-armv7l-cpython-39/trisicell/io 2023-07-21T09:24:50,066 copying trisicell/io/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2023-07-21T09:24:50,068 copying trisicell/io/_genotype.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2023-07-21T09:24:50,070 copying trisicell/io/_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2023-07-21T09:24:50,073 creating build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,074 copying trisicell/ul/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,076 copying trisicell/ul/_servers.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,078 copying trisicell/ul/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,080 copying trisicell/ul/_packages.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,082 copying trisicell/ul/_utils.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,084 copying trisicell/ul/_hclustering.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2023-07-21T09:24:50,088 creating build/lib.linux-armv7l-cpython-39/trisicell/logging 2023-07-21T09:24:50,089 copying trisicell/logging/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/logging 2023-07-21T09:24:50,091 copying trisicell/logging/_logging.py -> build/lib.linux-armv7l-cpython-39/trisicell/logging 2023-07-21T09:24:50,093 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets 2023-07-21T09:24:50,094 copying trisicell/datasets/_simulate.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2023-07-21T09:24:50,096 copying trisicell/datasets/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2023-07-21T09:24:50,098 copying trisicell/datasets/_datasets.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2023-07-21T09:24:50,101 creating build/lib.linux-armv7l-cpython-39/trisicell/tl 2023-07-21T09:24:50,102 copying trisicell/tl/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl 2023-07-21T09:24:50,104 creating build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,105 copying trisicell/external/gpps/_utils_ilp.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,107 copying trisicell/external/gpps/_gpps_ilp.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,109 copying trisicell/external/gpps/_gpps_hc.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,111 copying trisicell/external/gpps/_utils_hc.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,114 copying trisicell/external/gpps/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,115 copying trisicell/external/gpps/_nh2lgf.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2023-07-21T09:24:50,118 creating build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,120 copying trisicell/commands/mcalling/s03indexing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,122 copying trisicell/commands/mcalling/z03clean.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,124 copying trisicell/commands/mcalling/s09expressing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,126 copying trisicell/commands/mcalling/s02mapping.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,129 copying trisicell/commands/mcalling/s04mapping.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,131 copying trisicell/commands/mcalling/s05calling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,133 copying trisicell/commands/mcalling/s06jointcalling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,135 copying trisicell/commands/mcalling/s07merging.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,136 copying trisicell/commands/mcalling/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,141 copying trisicell/commands/mcalling/s01indexing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,142 copying trisicell/commands/mcalling/z01status.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,144 copying trisicell/commands/mcalling/z02matrixing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,146 copying trisicell/commands/mcalling/s08annotating.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,148 copying trisicell/commands/mcalling/s10velocitying.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2023-07-21T09:24:50,151 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2023-07-21T09:24:50,152 copying trisicell/tl/partition_function/_pf.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2023-07-21T09:24:50,154 copying trisicell/tl/partition_function/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2023-07-21T09:24:50,155 copying trisicell/tl/partition_function/_partition_function.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2023-07-21T09:24:50,157 copying trisicell/tl/partition_function/_clt_sampler.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2023-07-21T09:24:50,159 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2023-07-21T09:24:50,160 copying trisicell/tl/cna/_cna.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2023-07-21T09:24:50,163 copying trisicell/tl/cna/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2023-07-21T09:24:50,165 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2023-07-21T09:24:50,166 copying trisicell/tl/fitch/_fitch.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2023-07-21T09:24:50,168 copying trisicell/tl/fitch/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2023-07-21T09:24:50,170 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2023-07-21T09:24:50,171 copying trisicell/tl/score/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2023-07-21T09:24:50,173 copying trisicell/tl/score/_ours.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2023-07-21T09:24:50,176 copying trisicell/tl/score/_others.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2023-07-21T09:24:50,179 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2023-07-21T09:24:50,179 copying trisicell/tl/consensus/_consensus.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2023-07-21T09:24:50,181 copying trisicell/tl/consensus/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2023-07-21T09:24:50,183 copying trisicell/tl/consensus/_consensus_day.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2023-07-21T09:24:50,186 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,187 copying trisicell/tl/solver/_scite.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,189 copying trisicell/tl/solver/_sbm.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,191 copying trisicell/tl/solver/_phiscs.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,194 copying trisicell/tl/solver/_onconem.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,195 copying trisicell/tl/solver/_scistree.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,198 copying trisicell/tl/solver/_scelestial.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,200 copying trisicell/tl/solver/_sphyr.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,201 copying trisicell/tl/solver/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,203 copying trisicell/tl/solver/_siclonefit.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,205 copying trisicell/tl/solver/_dendro.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,207 copying trisicell/tl/solver/_sciphi.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,209 copying trisicell/tl/solver/_cellphy.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,211 copying trisicell/tl/solver/_bnb.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,214 copying trisicell/tl/solver/_cardelino.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,215 copying trisicell/tl/solver/_sasc.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,217 copying trisicell/tl/solver/_gpps.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,219 copying trisicell/tl/solver/_grmt.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2023-07-21T09:24:50,221 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2023-07-21T09:24:50,222 copying trisicell/tl/solver/huntress/_huntress.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2023-07-21T09:24:50,225 copying trisicell/tl/solver/huntress/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2023-07-21T09:24:50,227 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2023-07-21T09:24:50,228 copying trisicell/tl/solver/booster/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2023-07-21T09:24:50,230 copying trisicell/tl/solver/booster/_dependencies.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2023-07-21T09:24:50,233 copying trisicell/tl/solver/booster/_reconstruct_big_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2023-07-21T09:24:50,235 copying trisicell/tl/solver/booster/_subsamples.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2023-07-21T09:24:50,237 copying trisicell/tl/solver/booster/_booster.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2023-07-21T09:24:50,239 running egg_info 2023-07-21T09:24:50,262 writing trisicell.egg-info/PKG-INFO 2023-07-21T09:24:50,264 writing dependency_links to trisicell.egg-info/dependency_links.txt 2023-07-21T09:24:50,266 writing entry points to trisicell.egg-info/entry_points.txt 2023-07-21T09:24:50,267 writing requirements to trisicell.egg-info/requires.txt 2023-07-21T09:24:50,269 writing top-level names to trisicell.egg-info/top_level.txt 2023-07-21T09:24:50,319 listing git files failed - pretending there aren't any 2023-07-21T09:24:50,327 reading manifest file 'trisicell.egg-info/SOURCES.txt' 2023-07-21T09:24:50,345 reading manifest template 'MANIFEST.in' 2023-07-21T09:24:50,348 no previously-included directories found matching '.scripts' 2023-07-21T09:24:50,349 no previously-included directories found matching '.github' 2023-07-21T09:24:50,350 adding license file 'LICENSE' 2023-07-21T09:24:50,363 writing manifest file 'trisicell.egg-info/SOURCES.txt' 2023-07-21T09:24:50,367 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.datasets.data' is absent from the `packages` configuration. 2023-07-21T09:24:50,367 !! 2023-07-21T09:24:50,368 ******************************************************************************** 2023-07-21T09:24:50,368 ############################ 2023-07-21T09:24:50,368 # Package would be ignored # 2023-07-21T09:24:50,368 ############################ 2023-07-21T09:24:50,368 Python recognizes 'trisicell.datasets.data' as an importable package[^1], 2023-07-21T09:24:50,368 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,369 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,369 package, please make sure that 'trisicell.datasets.data' is explicitly added 2023-07-21T09:24:50,369 to the `packages` configuration field. 2023-07-21T09:24:50,369 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,369 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,369 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,370 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,370 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,370 If you don't want 'trisicell.datasets.data' to be distributed and are 2023-07-21T09:24:50,370 already explicitly excluding 'trisicell.datasets.data' via 2023-07-21T09:24:50,370 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,370 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,371 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,371 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,371 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,371 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,371 even if it does not contain any `.py` files. 2023-07-21T09:24:50,372 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,372 directory, all directories are treated like packages. 2023-07-21T09:24:50,372 ******************************************************************************** 2023-07-21T09:24:50,372 !! 2023-07-21T09:24:50,372 check.warn(importable) 2023-07-21T09:24:50,372 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.datasets.real' is absent from the `packages` configuration. 2023-07-21T09:24:50,372 !! 2023-07-21T09:24:50,373 ******************************************************************************** 2023-07-21T09:24:50,373 ############################ 2023-07-21T09:24:50,373 # Package would be ignored # 2023-07-21T09:24:50,373 ############################ 2023-07-21T09:24:50,373 Python recognizes 'trisicell.datasets.real' as an importable package[^1], 2023-07-21T09:24:50,373 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,374 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,374 package, please make sure that 'trisicell.datasets.real' is explicitly added 2023-07-21T09:24:50,374 to the `packages` configuration field. 2023-07-21T09:24:50,374 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,374 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,374 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,374 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,375 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,375 If you don't want 'trisicell.datasets.real' to be distributed and are 2023-07-21T09:24:50,375 already explicitly excluding 'trisicell.datasets.real' via 2023-07-21T09:24:50,375 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,375 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,375 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,376 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,376 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,376 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,376 even if it does not contain any `.py` files. 2023-07-21T09:24:50,376 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,376 directory, all directories are treated like packages. 2023-07-21T09:24:50,377 ******************************************************************************** 2023-07-21T09:24:50,377 !! 2023-07-21T09:24:50,377 check.warn(importable) 2023-07-21T09:24:50,377 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.datasets.test' is absent from the `packages` configuration. 2023-07-21T09:24:50,377 !! 2023-07-21T09:24:50,377 ******************************************************************************** 2023-07-21T09:24:50,377 ############################ 2023-07-21T09:24:50,378 # Package would be ignored # 2023-07-21T09:24:50,378 ############################ 2023-07-21T09:24:50,378 Python recognizes 'trisicell.datasets.test' as an importable package[^1], 2023-07-21T09:24:50,378 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,378 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,378 package, please make sure that 'trisicell.datasets.test' is explicitly added 2023-07-21T09:24:50,378 to the `packages` configuration field. 2023-07-21T09:24:50,379 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,379 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,379 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,379 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,379 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,380 If you don't want 'trisicell.datasets.test' to be distributed and are 2023-07-21T09:24:50,380 already explicitly excluding 'trisicell.datasets.test' via 2023-07-21T09:24:50,380 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,380 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,380 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,380 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,380 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,381 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,381 even if it does not contain any `.py` files. 2023-07-21T09:24:50,381 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,381 directory, all directories are treated like packages. 2023-07-21T09:24:50,381 ******************************************************************************** 2023-07-21T09:24:50,381 !! 2023-07-21T09:24:50,381 check.warn(importable) 2023-07-21T09:24:50,382 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.datasets.test.consensus' is absent from the `packages` configuration. 2023-07-21T09:24:50,382 !! 2023-07-21T09:24:50,382 ******************************************************************************** 2023-07-21T09:24:50,382 ############################ 2023-07-21T09:24:50,382 # Package would be ignored # 2023-07-21T09:24:50,382 ############################ 2023-07-21T09:24:50,382 Python recognizes 'trisicell.datasets.test.consensus' as an importable package[^1], 2023-07-21T09:24:50,382 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,383 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,383 package, please make sure that 'trisicell.datasets.test.consensus' is explicitly added 2023-07-21T09:24:50,383 to the `packages` configuration field. 2023-07-21T09:24:50,383 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,383 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,383 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,384 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,384 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,384 If you don't want 'trisicell.datasets.test.consensus' to be distributed and are 2023-07-21T09:24:50,384 already explicitly excluding 'trisicell.datasets.test.consensus' via 2023-07-21T09:24:50,384 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,384 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,384 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,385 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,385 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,385 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,385 even if it does not contain any `.py` files. 2023-07-21T09:24:50,385 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,386 directory, all directories are treated like packages. 2023-07-21T09:24:50,386 ******************************************************************************** 2023-07-21T09:24:50,386 !! 2023-07-21T09:24:50,386 check.warn(importable) 2023-07-21T09:24:50,386 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.datasets.test.mcalling' is absent from the `packages` configuration. 2023-07-21T09:24:50,386 !! 2023-07-21T09:24:50,386 ******************************************************************************** 2023-07-21T09:24:50,387 ############################ 2023-07-21T09:24:50,387 # Package would be ignored # 2023-07-21T09:24:50,387 ############################ 2023-07-21T09:24:50,387 Python recognizes 'trisicell.datasets.test.mcalling' as an importable package[^1], 2023-07-21T09:24:50,387 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,387 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,387 package, please make sure that 'trisicell.datasets.test.mcalling' is explicitly added 2023-07-21T09:24:50,387 to the `packages` configuration field. 2023-07-21T09:24:50,388 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,388 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,388 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,388 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,388 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,389 If you don't want 'trisicell.datasets.test.mcalling' to be distributed and are 2023-07-21T09:24:50,389 already explicitly excluding 'trisicell.datasets.test.mcalling' via 2023-07-21T09:24:50,389 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,389 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,389 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,389 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,390 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,390 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,390 even if it does not contain any `.py` files. 2023-07-21T09:24:50,390 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,391 directory, all directories are treated like packages. 2023-07-21T09:24:50,392 ******************************************************************************** 2023-07-21T09:24:50,393 !! 2023-07-21T09:24:50,393 check.warn(importable) 2023-07-21T09:24:50,393 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.external.mltd' is absent from the `packages` configuration. 2023-07-21T09:24:50,393 !! 2023-07-21T09:24:50,393 ******************************************************************************** 2023-07-21T09:24:50,394 ############################ 2023-07-21T09:24:50,394 # Package would be ignored # 2023-07-21T09:24:50,394 ############################ 2023-07-21T09:24:50,394 Python recognizes 'trisicell.external.mltd' as an importable package[^1], 2023-07-21T09:24:50,394 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,394 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,395 package, please make sure that 'trisicell.external.mltd' is explicitly added 2023-07-21T09:24:50,395 to the `packages` configuration field. 2023-07-21T09:24:50,395 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,395 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,395 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,396 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,396 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,396 If you don't want 'trisicell.external.mltd' to be distributed and are 2023-07-21T09:24:50,396 already explicitly excluding 'trisicell.external.mltd' via 2023-07-21T09:24:50,397 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,397 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,397 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,397 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,398 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,399 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,399 even if it does not contain any `.py` files. 2023-07-21T09:24:50,399 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,399 directory, all directories are treated like packages. 2023-07-21T09:24:50,399 ******************************************************************************** 2023-07-21T09:24:50,399 !! 2023-07-21T09:24:50,400 check.warn(importable) 2023-07-21T09:24:50,400 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.external.scistree' is absent from the `packages` configuration. 2023-07-21T09:24:50,400 !! 2023-07-21T09:24:50,400 ******************************************************************************** 2023-07-21T09:24:50,400 ############################ 2023-07-21T09:24:50,400 # Package would be ignored # 2023-07-21T09:24:50,401 ############################ 2023-07-21T09:24:50,401 Python recognizes 'trisicell.external.scistree' as an importable package[^1], 2023-07-21T09:24:50,401 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,401 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,401 package, please make sure that 'trisicell.external.scistree' is explicitly added 2023-07-21T09:24:50,401 to the `packages` configuration field. 2023-07-21T09:24:50,402 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,402 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,402 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,402 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,402 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,403 If you don't want 'trisicell.external.scistree' to be distributed and are 2023-07-21T09:24:50,403 already explicitly excluding 'trisicell.external.scistree' via 2023-07-21T09:24:50,403 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,403 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,403 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,403 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,404 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,404 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,404 even if it does not contain any `.py` files. 2023-07-21T09:24:50,404 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,404 directory, all directories are treated like packages. 2023-07-21T09:24:50,404 ******************************************************************************** 2023-07-21T09:24:50,405 !! 2023-07-21T09:24:50,405 check.warn(importable) 2023-07-21T09:24:50,405 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.external.scite' is absent from the `packages` configuration. 2023-07-21T09:24:50,405 !! 2023-07-21T09:24:50,405 ******************************************************************************** 2023-07-21T09:24:50,406 ############################ 2023-07-21T09:24:50,406 # Package would be ignored # 2023-07-21T09:24:50,406 ############################ 2023-07-21T09:24:50,406 Python recognizes 'trisicell.external.scite' as an importable package[^1], 2023-07-21T09:24:50,406 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,406 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,407 package, please make sure that 'trisicell.external.scite' is explicitly added 2023-07-21T09:24:50,407 to the `packages` configuration field. 2023-07-21T09:24:50,407 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,407 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,407 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,407 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,408 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,408 If you don't want 'trisicell.external.scite' to be distributed and are 2023-07-21T09:24:50,408 already explicitly excluding 'trisicell.external.scite' via 2023-07-21T09:24:50,408 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,408 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,408 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,409 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,409 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,409 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,409 even if it does not contain any `.py` files. 2023-07-21T09:24:50,410 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,410 directory, all directories are treated like packages. 2023-07-21T09:24:50,410 ******************************************************************************** 2023-07-21T09:24:50,410 !! 2023-07-21T09:24:50,410 check.warn(importable) 2023-07-21T09:24:50,410 /tmp/pip-build-env-lbx8y0bk/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'trisicell.external.scprob' is absent from the `packages` configuration. 2023-07-21T09:24:50,411 !! 2023-07-21T09:24:50,411 ******************************************************************************** 2023-07-21T09:24:50,411 ############################ 2023-07-21T09:24:50,411 # Package would be ignored # 2023-07-21T09:24:50,411 ############################ 2023-07-21T09:24:50,411 Python recognizes 'trisicell.external.scprob' as an importable package[^1], 2023-07-21T09:24:50,411 but it is absent from setuptools' `packages` configuration. 2023-07-21T09:24:50,412 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-21T09:24:50,412 package, please make sure that 'trisicell.external.scprob' is explicitly added 2023-07-21T09:24:50,412 to the `packages` configuration field. 2023-07-21T09:24:50,412 Alternatively, you can also rely on setuptools' discovery methods 2023-07-21T09:24:50,412 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-21T09:24:50,412 instead of `find_packages(...)`/`find:`). 2023-07-21T09:24:50,413 You can read more about "package discovery" on setuptools documentation page: 2023-07-21T09:24:50,413 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-21T09:24:50,413 If you don't want 'trisicell.external.scprob' to be distributed and are 2023-07-21T09:24:50,413 already explicitly excluding 'trisicell.external.scprob' via 2023-07-21T09:24:50,413 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-21T09:24:50,414 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-21T09:24:50,414 combination with a more fine grained `package-data` configuration. 2023-07-21T09:24:50,414 You can read more about "package data files" on setuptools documentation page: 2023-07-21T09:24:50,414 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-21T09:24:50,415 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-21T09:24:50,415 even if it does not contain any `.py` files. 2023-07-21T09:24:50,415 On the other hand, currently there is no concept of package data 2023-07-21T09:24:50,415 directory, all directories are treated like packages. 2023-07-21T09:24:50,415 ******************************************************************************** 2023-07-21T09:24:50,415 !! 2023-07-21T09:24:50,416 check.warn(importable) 2023-07-21T09:24:50,416 copying trisicell/external/_mltd.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,416 copying trisicell/external/_mltd.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,416 copying trisicell/external/_scistree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,416 copying trisicell/external/_scistree.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,416 copying trisicell/external/_scite.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,416 copying trisicell/external/_scite.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,417 copying trisicell/external/_scprob.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,417 copying trisicell/external/_scprob.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:50,419 creating build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2023-07-21T09:24:50,419 copying trisicell/external/mltd/mltd.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2023-07-21T09:24:50,422 copying trisicell/external/mltd/mltd.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2023-07-21T09:24:50,424 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,425 copying trisicell/external/scistree/BinaryMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,428 copying trisicell/external/scistree/BinaryMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,431 copying trisicell/external/scistree/BioSequenceMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,433 copying trisicell/external/scistree/BioSequenceMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,436 copying trisicell/external/scistree/GenotypeMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,438 copying trisicell/external/scistree/GenotypeMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,440 copying trisicell/external/scistree/MarginalTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,444 copying trisicell/external/scistree/MarginalTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,447 copying trisicell/external/scistree/PhylogenyTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,449 copying trisicell/external/scistree/PhylogenyTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,452 copying trisicell/external/scistree/PhylogenyTreeBasic.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,458 copying trisicell/external/scistree/PhylogenyTreeBasic.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,460 copying trisicell/external/scistree/RBT.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,465 copying trisicell/external/scistree/RBT.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,467 copying trisicell/external/scistree/RerootTreeUtils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,470 copying trisicell/external/scistree/RerootTreeUtils.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,471 copying trisicell/external/scistree/ScistDoublet.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,475 copying trisicell/external/scistree/ScistDoublet.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,477 copying trisicell/external/scistree/ScistErrRateInf.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,480 copying trisicell/external/scistree/ScistErrRateInf.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,482 copying trisicell/external/scistree/ScistGenotype.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,485 copying trisicell/external/scistree/ScistGenotype.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,488 copying trisicell/external/scistree/ScistPerfPhyImp.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,491 copying trisicell/external/scistree/ScistPerfPhyImp.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,493 copying trisicell/external/scistree/ScistPerfPhyUtils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,496 copying trisicell/external/scistree/ScistPerfPhyUtils.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,498 copying trisicell/external/scistree/TreeBuilder.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,502 copying trisicell/external/scistree/TreeBuilder.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,504 copying trisicell/external/scistree/UnWeightedGraph.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,507 copying trisicell/external/scistree/UnWeightedGraph.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,510 copying trisicell/external/scistree/Utils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,513 copying trisicell/external/scistree/Utils.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,515 copying trisicell/external/scistree/Utils2.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,518 copying trisicell/external/scistree/Utils2.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,520 copying trisicell/external/scistree/Utils3.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,524 copying trisicell/external/scistree/Utils3.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,526 copying trisicell/external/scistree/Utils4.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,530 copying trisicell/external/scistree/Utils4.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,533 copying trisicell/external/scistree/UtilsNumerical.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,536 copying trisicell/external/scistree/UtilsNumerical.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,538 copying trisicell/external/scistree/ctpl_stl.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,540 copying trisicell/external/scistree/main.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,543 copying trisicell/external/scistree/main.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:24:50,546 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,546 copying trisicell/external/scite/findBestTrees.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,549 copying trisicell/external/scite/findBestTrees.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,551 copying trisicell/external/scite/matrices.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,554 copying trisicell/external/scite/matrices.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,556 copying trisicell/external/scite/mcmc.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,559 copying trisicell/external/scite/mcmc.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,561 copying trisicell/external/scite/mcmcBinTreeMove.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,563 copying trisicell/external/scite/mcmcBinTreeMove.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,565 copying trisicell/external/scite/mcmcTreeMove.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,569 copying trisicell/external/scite/mcmcTreeMove.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,571 copying trisicell/external/scite/output.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,573 copying trisicell/external/scite/output.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,575 copying trisicell/external/scite/rand.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,577 copying trisicell/external/scite/rand.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,579 copying trisicell/external/scite/scoreBinTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,582 copying trisicell/external/scite/scoreBinTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,584 copying trisicell/external/scite/scoreTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,587 copying trisicell/external/scite/scoreTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,589 copying trisicell/external/scite/treelist.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,591 copying trisicell/external/scite/treelist.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,593 copying trisicell/external/scite/trees.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,596 copying trisicell/external/scite/trees.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:24:50,598 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2023-07-21T09:24:50,599 copying trisicell/external/scprob/main.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2023-07-21T09:24:50,602 copying trisicell/external/scprob/main.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2023-07-21T09:24:50,604 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2023-07-21T09:24:50,605 copying trisicell/datasets/data/expression.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2023-07-21T09:24:50,739 copying trisicell/datasets/data/genotype.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2023-07-21T09:24:50,745 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2023-07-21T09:24:50,746 copying trisicell/datasets/real/colorectal2.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2023-07-21T09:24:50,750 copying trisicell/datasets/real/colorectal2.rc.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2023-07-21T09:24:50,754 copying trisicell/datasets/real/ovarian.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2023-07-21T09:24:51,009 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,010 copying trisicell/datasets/test/T00.nwk -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,012 copying trisicell/datasets/test/T06.nwk -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,015 copying trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,017 copying trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,020 copying trisicell/datasets/test/mcalling_config.yml -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,022 copying trisicell/datasets/test/test.tsv -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2023-07-21T09:24:51,024 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,025 copying trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,032 copying trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,035 copying trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,047 copying trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,051 copying trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,054 copying trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,058 copying trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2023-07-21T09:24:51,062 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,063 copying trisicell/datasets/test/mcalling/cell0_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,065 copying trisicell/datasets/test/mcalling/cell0_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,067 copying trisicell/datasets/test/mcalling/cell1_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,069 copying trisicell/datasets/test/mcalling/cell1_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,071 copying trisicell/datasets/test/mcalling/cell2_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,073 copying trisicell/datasets/test/mcalling/cell2_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,075 copying trisicell/datasets/test/mcalling/cell3_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,077 copying trisicell/datasets/test/mcalling/cell3_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,079 copying trisicell/datasets/test/mcalling/cell4_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,080 copying trisicell/datasets/test/mcalling/cell4_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,083 copying trisicell/datasets/test/mcalling/cell5_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,084 copying trisicell/datasets/test/mcalling/cell5_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,086 copying trisicell/datasets/test/mcalling/cell6_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,088 copying trisicell/datasets/test/mcalling/cell6_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,090 copying trisicell/datasets/test/mcalling/cell7_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,092 copying trisicell/datasets/test/mcalling/cell7_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,094 copying trisicell/datasets/test/mcalling/cell8_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,096 copying trisicell/datasets/test/mcalling/cell8_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,098 copying trisicell/datasets/test/mcalling/cell9_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,100 copying trisicell/datasets/test/mcalling/cell9_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2023-07-21T09:24:51,115 running build_ext 2023-07-21T09:24:51,672 building 'trisicell.external._mltd' extension 2023-07-21T09:24:51,673 creating build/temp.linux-armv7l-cpython-39 2023-07-21T09:24:51,673 creating build/temp.linux-armv7l-cpython-39/trisicell 2023-07-21T09:24:51,674 creating build/temp.linux-armv7l-cpython-39/trisicell/external 2023-07-21T09:24:51,675 creating build/temp.linux-armv7l-cpython-39/trisicell/external/mltd 2023-07-21T09:24:51,676 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/mltd -I/usr/include/python3.9 -c trisicell/external/_mltd.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_mltd.o -std=c++11 2023-07-21T09:24:54,540 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/mltd -I/usr/include/python3.9 -c trisicell/external/mltd/mltd.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.o -std=c++11 2023-07-21T09:25:00,852 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_mltd.o build/temp.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so 2023-07-21T09:25:01,150 building 'trisicell.external._scprob' extension 2023-07-21T09:25:01,151 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scprob 2023-07-21T09:25:01,151 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scprob -I/usr/include/python3.9 -c trisicell/external/_scprob.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scprob.o -std=c++11 2023-07-21T09:25:02,618 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scprob -I/usr/include/python3.9 -c trisicell/external/scprob/main.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scprob/main.o -std=c++11 2023-07-21T09:25:04,795 trisicell/external/scprob/main.cpp:501:13: warning: ‘void AdjustReadCountForDrop(int, int, const std::map, std::pair >&, std::pair&)’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,795 501 | static void AdjustReadCountForDrop(int cell, int site, const map, pair > &setDropPos, pair &readCount) 2023-07-21T09:25:04,796 | ^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:04,796 trisicell/external/scprob/main.cpp:487:13: warning: ‘void ConvReadBasedProbToGeno(const std::vector > >&, std::vector >&)’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,796 487 | static void ConvReadBasedProbToGeno( const vector > > &listReadBasedProb, vector > &listGenos) 2023-07-21T09:25:04,796 | ^~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:04,796 trisicell/external/scprob/main.cpp:440:12: warning: ‘int CountTotAlleleForGenos(const std::map >&)’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,796 440 | static int CountTotAlleleForGenos(const map > &mapGenosOfCells) 2023-07-21T09:25:04,797 | ^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:04,797 trisicell/external/scprob/main.cpp:426:12: warning: ‘int CalcAllele0FreqForGenos(const std::vector&)’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,797 426 | static int CalcAllele0FreqForGenos(const vector &listGenos) 2023-07-21T09:25:04,797 | ^~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:04,797 trisicell/external/scprob/main.cpp:242:13: warning: ‘void CalcGenotypeProbOfReads(const std::pair&, double, std::vector&)’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,797 242 | static void CalcGenotypeProbOfReads(const pair &readsCount01, double allele0Freq, vector &listGenoProbs) 2023-07-21T09:25:04,798 | ^~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:04,798 trisicell/external/scprob/main.cpp:166:15: warning: ‘double CalcProb1()’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,798 166 | static double CalcProb1() 2023-07-21T09:25:04,798 | ^~~~~~~~~ 2023-07-21T09:25:04,798 trisicell/external/scprob/main.cpp:158:15: warning: ‘double CalcProb0(int)’ defined but not used [-Wunused-function] 2023-07-21T09:25:04,799 158 | static double CalcProb0(int cell) 2023-07-21T09:25:04,799 | ^~~~~~~~~ 2023-07-21T09:25:04,799 trisicell/external/scprob/main.cpp:37:15: warning: ‘stdStrandBias’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,799 37 | static double stdStrandBias = 0.0; 2023-07-21T09:25:04,799 | ^~~~~~~~~~~~~ 2023-07-21T09:25:04,799 trisicell/external/scprob/main.cpp:36:15: warning: ‘aveStrandBias’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,799 36 | static double aveStrandBias = 0.0; 2023-07-21T09:25:04,800 | ^~~~~~~~~~~~~ 2023-07-21T09:25:04,800 trisicell/external/scprob/main.cpp:35:15: warning: ‘stdReadDepth’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,800 35 | static double stdReadDepth = 2.0; 2023-07-21T09:25:04,800 | ^~~~~~~~~~~~ 2023-07-21T09:25:04,800 trisicell/external/scprob/main.cpp:34:15: warning: ‘aveReadDepth’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,800 34 | static double aveReadDepth = 4.0; 2023-07-21T09:25:04,800 | ^~~~~~~~~~~~ 2023-07-21T09:25:04,800 trisicell/external/scprob/main.cpp:28:15: warning: ‘minAlleFreq’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,801 28 | static double minAlleFreq = 0.0; 2023-07-21T09:25:04,801 | ^~~~~~~~~~~ 2023-07-21T09:25:04,801 trisicell/external/scprob/main.cpp:27:13: warning: ‘seedRndUserDef’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,801 27 | static bool seedRndUserDef = true; 2023-07-21T09:25:04,801 | ^~~~~~~~~~~~~~ 2023-07-21T09:25:04,801 trisicell/external/scprob/main.cpp:26:15: warning: ‘fracMissing’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,801 26 | static double fracMissing = 0.0; 2023-07-21T09:25:04,802 | ^~~~~~~~~~~ 2023-07-21T09:25:04,802 trisicell/external/scprob/main.cpp:24:15: warning: ‘rateDropoutstd’ defined but not used [-Wunused-variable] 2023-07-21T09:25:04,802 24 | static double rateDropoutstd = 0.0; 2023-07-21T09:25:04,802 | ^~~~~~~~~~~~~~ 2023-07-21T09:25:05,489 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:05,489 from trisicell/external/scprob/main.cpp:8: 2023-07-21T09:25:05,490 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:25:05,490 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:05,490 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:25:05,490 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:06,370 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:06,371 from trisicell/external/scprob/main.cpp:8: 2023-07-21T09:25:06,371 /usr/include/c++/10/bits/stl_vector.h: In function ‘int main_in_c(int, char**)’: 2023-07-21T09:25:06,371 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,371 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,371 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,372 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,372 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,372 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,374 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,375 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,375 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,375 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,375 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,375 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,376 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,376 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,376 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,376 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,376 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,376 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,376 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,377 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,377 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,377 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,377 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,377 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:06,377 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:06,378 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:06,378 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:07,943 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_scprob.o build/temp.linux-armv7l-cpython-39/trisicell/external/scprob/main.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so 2023-07-21T09:25:08,226 building 'trisicell.external._scistree' extension 2023-07-21T09:25:08,227 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scistree 2023-07-21T09:25:08,229 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/_scistree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scistree.o -O3 -std=c++11 -c 2023-07-21T09:25:09,761 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/BinaryMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.o -O3 -std=c++11 -c 2023-07-21T09:25:11,309 trisicell/external/scistree/BinaryMatrix.cpp: In member function ‘void BinaryMatrix::TrimDupSites(std::set*, bool)’: 2023-07-21T09:25:11,309 trisicell/external/scistree/BinaryMatrix.cpp:96:9: warning: variable ‘f’ set but not used [-Wunused-but-set-variable] 2023-07-21T09:25:11,310 96 | bool f = false; 2023-07-21T09:25:11,310 | ^ 2023-07-21T09:25:11,340 trisicell/external/scistree/BinaryMatrix.cpp: In member function ‘bool BinaryMatrix::IsCompatibleRooted(int, int, int, int)’: 2023-07-21T09:25:11,340 trisicell/external/scistree/BinaryMatrix.cpp:870:7: warning: variable ‘f00’ set but not used [-Wunused-but-set-variable] 2023-07-21T09:25:11,340 870 | bool f00 = false; 2023-07-21T09:25:11,341 | ^~~ 2023-07-21T09:25:17,861 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:17,862 from trisicell/external/scistree/BinaryMatrix.h:5, 2023-07-21T09:25:17,862 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2023-07-21T09:25:17,862 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:25:17,862 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:17,862 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:25:17,862 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:17,863 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:17,967 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:17,967 from trisicell/external/scistree/BinaryMatrix.h:5, 2023-07-21T09:25:17,967 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2023-07-21T09:25:17,967 /usr/include/c++/10/bits/stl_vector.h: In function ‘void ReadSitePosFromFirstRowInFile(const char*, int, std::vector&)’: 2023-07-21T09:25:17,968 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:17,968 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:17,968 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:19,823 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:19,823 from trisicell/external/scistree/BinaryMatrix.h:5, 2023-07-21T09:25:19,824 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2023-07-21T09:25:19,824 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:25:19,824 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:19,824 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:25:19,824 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:19,863 /usr/include/c++/10/bits/vector.tcc: In member function ‘void BinaryMatrix::CalcSFS(std::vector&) const’: 2023-07-21T09:25:19,864 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:19,864 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:19,864 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:19,899 /usr/include/c++/10/bits/vector.tcc: In member function ‘void BinaryMatrix::CollectAllPairwiseDiffs(const std::set&, const std::set&, std::vector&) const’: 2023-07-21T09:25:19,900 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:19,900 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:19,900 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:21,142 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/BioSequenceMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.o -O3 -std=c++11 -c 2023-07-21T09:25:22,470 trisicell/external/scistree/BioSequenceMatrix.cpp: In member function ‘void BioSequenceMatrix::TrimDupRows(std::set*, std::vector >*)’: 2023-07-21T09:25:22,470 trisicell/external/scistree/BioSequenceMatrix.cpp:273:7: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 2023-07-21T09:25:22,470 273 | bool res = false; // we stop unless we find some duplicate rows and/or non-informat site 2023-07-21T09:25:22,471 | ^~~ 2023-07-21T09:25:29,688 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/GenotypeMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.o -O3 -std=c++11 -c 2023-07-21T09:25:31,018 trisicell/external/scistree/GenotypeMatrix.cpp: In member function ‘bool GenotypeMatrix::AreColumnsComplete(int, int)’: 2023-07-21T09:25:31,019 trisicell/external/scistree/GenotypeMatrix.cpp:140:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:31,019 140 | for (int i = 0; i < completePairs.size(); ++i) 2023-07-21T09:25:31,019 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:33,450 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/MarginalTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.o -O3 -std=c++11 -c 2023-07-21T09:25:41,421 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:41,422 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:41,422 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:41,422 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:25:41,422 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:41,422 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:25:41,422 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:41,686 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:41,686 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:41,686 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:41,687 /usr/include/c++/10/bits/stl_vector.h: In function ‘bool ReadinMarginalTrees(std::ifstream&, std::vector&)’: 2023-07-21T09:25:41,687 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:41,687 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:41,687 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:45,073 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:45,073 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:45,073 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:45,073 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:25:45,073 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:45,073 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:25:45,073 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,074 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:25:45,117 /usr/include/c++/10/bits/vector.tcc: In function ‘void InitMarginalTree(MarginalTree&, int, const std::vector&, const std::vector&)’: 2023-07-21T09:25:45,117 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,117 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,117 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,118 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,118 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,118 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,119 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,119 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,119 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,172 /usr/include/c++/10/bits/vector.tcc: In function ‘void GenRandBinaryTree(int, MarginalTree&)’: 2023-07-21T09:25:45,172 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,172 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,173 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,173 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,174 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,174 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,244 /usr/include/c++/10/bits/vector.tcc: In function ‘bool ReadinMarginalTreesNewickWLenString(const string&, int, MarginalTree&, bool, TaxaMapper*)’: 2023-07-21T09:25:45,245 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,245 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,245 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,537 /usr/include/c++/10/bits/vector.tcc: In member function ‘void MarginalTree::InitUnitEdgelen()’: 2023-07-21T09:25:45,537 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,537 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,537 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,585 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:45,586 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:45,586 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:45,586 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::InitDefaultEdgeLen()’: 2023-07-21T09:25:45,586 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,586 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:45,586 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:45,587 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:45,587 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:45,587 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:45,587 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,587 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,587 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,733 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:45,733 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:45,733 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:45,733 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::Binarize()’: 2023-07-21T09:25:45,733 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,734 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:45,734 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:45,734 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,735 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:45,735 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:45,736 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:45,737 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:45,737 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:45,737 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,737 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:45,737 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:45,738 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:45,738 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:45,738 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:45,738 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:45,739 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:45,739 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:46,003 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:46,004 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:46,004 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,004 /usr/include/c++/10/bits/vector.tcc: In member function ‘void MarginalTree::MakeLeafSubtreeOfTwo(int, int, int, double, double)’: 2023-07-21T09:25:46,004 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,004 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:46,004 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,005 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:46,006 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:46,006 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,006 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,006 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:46,006 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:46,006 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,007 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:46,007 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:46,007 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:46,007 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:46,007 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,008 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,008 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:46,008 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,008 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,009 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:46,009 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,158 In file included from /usr/include/c++/10/set:60, 2023-07-21T09:25:46,158 from trisicell/external/scistree/Utils.h:6, 2023-07-21T09:25:46,158 from trisicell/external/scistree/MarginalTree.h:8, 2023-07-21T09:25:46,158 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,159 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2023-07-21T09:25:46,159 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:25:46,159 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-07-21T09:25:46,159 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,266 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:25:46,266 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:46,266 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,267 /usr/include/c++/10/bits/vector.tcc: In function ‘void GenRandBinaryTreeClock(int, double, MarginalTree&)’: 2023-07-21T09:25:46,267 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,267 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:46,267 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,268 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,268 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:25:46,268 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,270 In file included from /usr/include/c++/10/map:61, 2023-07-21T09:25:46,270 from trisicell/external/scistree/Utils.h:7, 2023-07-21T09:25:46,270 from trisicell/external/scistree/MarginalTree.h:8, 2023-07-21T09:25:46,270 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,270 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:25:46,271 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:25:46,271 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,271 502 | std::tuple(__k), 2023-07-21T09:25:46,271 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,271 503 | std::tuple<>()); 2023-07-21T09:25:46,271 | ~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,271 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:25:46,272 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:25:46,272 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,272 502 | std::tuple(__k), 2023-07-21T09:25:46,272 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,272 503 | std::tuple<>()); 2023-07-21T09:25:46,272 | ~~~~~~~~~~~~~~~ 2023-07-21T09:25:46,695 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:25:46,696 from trisicell/external/scistree/MarginalTree.h:5, 2023-07-21T09:25:46,696 from trisicell/external/scistree/MarginalTree.cpp:1: 2023-07-21T09:25:46,696 /usr/include/c++/10/bits/stl_vector.h: In function ‘void UpdateBranchLenInSubtree(MarginalTree&, std::map&, MarginalTree&)’: 2023-07-21T09:25:46,696 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:46,696 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:46,696 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:47,827 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::Consolidate()’: 2023-07-21T09:25:47,827 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:25:47,828 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:25:47,828 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:25:52,801 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/PhylogenyTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.o -O3 -std=c++11 -c 2023-07-21T09:25:54,283 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::SortByOneBit(int, const BinaryMatrix&, const std::vector&, std::vector&)’: 2023-07-21T09:25:54,283 trisicell/external/scistree/PhylogenyTree.cpp:95:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,284 95 | for (int i = 0; i < preList.size(); ++i) 2023-07-21T09:25:54,284 | ~~^~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,284 trisicell/external/scistree/PhylogenyTree.cpp:107:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,284 107 | for (int i = 0; i < preList.size(); ++i) 2023-07-21T09:25:54,284 | ~~^~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,288 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::RemoveDupSites(const BinaryMatrix&, std::vector&, std::vector >&)’: 2023-07-21T09:25:54,288 trisicell/external/scistree/PhylogenyTree.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,288 129 | for (int i = 1; i < sortedPosList.size(); ++i) 2023-07-21T09:25:54,288 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,290 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::ComputeLijLj(const BinaryMatrix&, const std::vector&, const std::vector&, std::vector&, std::vector&)’: 2023-07-21T09:25:54,290 trisicell/external/scistree/PhylogenyTree.cpp:182:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,290 182 | for (int j = 0; j < sortedPosList.size(); ++j) 2023-07-21T09:25:54,290 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,290 trisicell/external/scistree/PhylogenyTree.cpp:199:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,291 199 | for (int j = 0; j < sortedPosList.size(); ++j) 2023-07-21T09:25:54,291 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,292 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘bool PhylogenyTree::ExamineLijLj(const BinaryMatrix&, const std::vector&, const std::vector&, const std::vector&, const std::vector&)’: 2023-07-21T09:25:54,292 trisicell/external/scistree/PhylogenyTree.cpp:221:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,292 221 | for (int j = 0; j < sortedPosList.size(); ++j) 2023-07-21T09:25:54,292 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,298 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::BuildTree(const BinaryMatrix&, const std::vector&, const std::vector&, const std::vector >&, const std::vector&)’: 2023-07-21T09:25:54,298 trisicell/external/scistree/PhylogenyTree.cpp:250:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,298 250 | for (int i = 0; i < sortedPosList.size(); ++i) 2023-07-21T09:25:54,298 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,299 trisicell/external/scistree/PhylogenyTree.cpp:257:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,299 257 | for (int j = 0; j < Lj.size(); ++j) 2023-07-21T09:25:54,299 | ~~^~~~~~~~~~~ 2023-07-21T09:25:54,299 trisicell/external/scistree/PhylogenyTree.cpp:263:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,299 263 | for (int dup = 0; dup < duplicates[j].size(); ++dup) 2023-07-21T09:25:54,299 | ~~~~^~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,304 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::CleanupTree(const BinaryMatrix&)’: 2023-07-21T09:25:54,304 trisicell/external/scistree/PhylogenyTree.cpp:373:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,304 373 | for (int i = 0; i < curTN->nodeValues.size(); ++i) 2023-07-21T09:25:54,305 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,306 trisicell/external/scistree/PhylogenyTree.cpp:399:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,306 399 | for (int i = 0; i < curTN->listChildren.size(); ++i) 2023-07-21T09:25:54,306 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,307 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::RemoveDegreeTwoNodes()’: 2023-07-21T09:25:54,307 trisicell/external/scistree/PhylogenyTree.cpp:424:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,308 424 | for (int i = 0; i < curTN->listChildren.size(); ++i) 2023-07-21T09:25:54,308 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:25:54,320 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘bool PhylogenyTree::ConsOnBinMatrix(const BinaryMatrix&)’: 2023-07-21T09:25:54,320 trisicell/external/scistree/PhylogenyTree.cpp:522:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:25:54,320 522 | for (int i = 0; i < Lij.size(); ++i) 2023-07-21T09:25:54,320 | ~~^~~~~~~~~~~~ 2023-07-21T09:25:54,411 trisicell/external/scistree/PhylogenyTree.cpp: In function ‘std::string ConsRootedPerfectPhylogenyFromMat(const BinaryMatrix&, bool, bool)’: 2023-07-21T09:25:54,411 trisicell/external/scistree/PhylogenyTree.cpp:564:26: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2023-07-21T09:25:54,412 564 | if (split.size() == matInput.GetRowNum()) 2023-07-21T09:25:54,412 | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:26:00,886 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/PhylogenyTreeBasic.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.o -O3 -std=c++11 -c 2023-07-21T09:26:02,531 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In function ‘bool ReadinPhyloTreesNewick(std::ifstream&, int, std::vector&, TaxaMapper*)’: 2023-07-21T09:26:02,532 trisicell/external/scistree/PhylogenyTreeBasic.cpp:105:9: warning: variable ‘nLvs’ set but not used [-Wunused-but-set-variable] 2023-07-21T09:26:02,532 105 | int nLvs = numLeaves; 2023-07-21T09:26:02,532 | ^~~~ 2023-07-21T09:26:03,077 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In member function ‘void TreeNode::IncEdgeLabelsBy(int, bool)’: 2023-07-21T09:26:03,077 trisicell/external/scistree/PhylogenyTreeBasic.cpp:2346:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:26:03,077 2346 | for (int j = 0; j < listEdgeLabels[i].size(); ++j) 2023-07-21T09:26:03,078 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:26:03,157 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In member function ‘TreeNode* PhylogenyTreeBasic::ConsOnNewickSubtree(const string&, int&, int&, int, bool, TaxaMapper*)’: 2023-07-21T09:26:03,158 trisicell/external/scistree/PhylogenyTreeBasic.cpp:3543:13: warning: variable ‘rightPos’ set but not used [-Wunused-but-set-variable] 2023-07-21T09:26:03,158 3543 | int rightPos = (int)nwStringPart.size() - 1; 2023-07-21T09:26:03,158 | ^~~~~~~~ 2023-07-21T09:26:22,513 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:26:22,513 from trisicell/external/scistree/PhylogenyTreeBasic.h:7, 2023-07-21T09:26:22,514 from trisicell/external/scistree/PhylogenyTreeBasic.cpp:5: 2023-07-21T09:26:22,514 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:26:22,514 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:26:22,514 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:26:22,514 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:26:29,802 /usr/include/c++/10/bits/vector.tcc: In function ‘void RandTrimLeavesFromTree(PhylogenyTreeBasic*, int)’: 2023-07-21T09:26:29,802 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:26:29,803 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:26:29,803 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:26:44,128 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/RBT.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.o -O3 -std=c++11 -c 2023-07-21T09:26:52,870 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:26:52,871 from trisicell/external/scistree/RBT.h:7, 2023-07-21T09:26:52,871 from trisicell/external/scistree/RBT.cpp:1: 2023-07-21T09:26:52,871 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:26:52,871 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:26:52,871 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:26:52,872 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:26:52,986 /usr/include/c++/10/bits/vector.tcc: In member function ‘void RBT::RetrievePlainDesc(int&, std::vector&, std::vector&, std::vector&)’: 2023-07-21T09:26:52,987 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:26:52,987 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:26:52,987 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:26:54,229 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/RerootTreeUtils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.o -O3 -std=c++11 -c 2023-07-21T09:26:55,387 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘double stringToDouble(std::string&)’: 2023-07-21T09:26:55,387 trisicell/external/scistree/RerootTreeUtils.cpp:62:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:26:55,388 62 | for (; i < content.size() && content[i] != '.'; ++i) 2023-07-21T09:26:55,388 | ~~^~~~~~~~~~~~~~~~ 2023-07-21T09:26:55,436 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘void buildGraph(std::vector >&, std::map >&, std::map, int>&)’: 2023-07-21T09:26:55,437 trisicell/external/scistree/RerootTreeUtils.cpp:95:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:26:55,437 95 | for (int i = 0; i < elements.size(); ++i) 2023-07-21T09:26:55,437 | ~~^~~~~~~~~~~~~~~~~ 2023-07-21T09:26:55,683 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘void Test_split()’: 2023-07-21T09:26:55,683 trisicell/external/scistree/RerootTreeUtils.cpp:384:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:26:55,683 384 | for (int i = 0; i < elements.size(); ++i) 2023-07-21T09:26:55,683 | ~~^~~~~~~~~~~~~~~~~ 2023-07-21T09:26:55,684 trisicell/external/scistree/RerootTreeUtils.cpp:390:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:26:55,684 390 | for (int i = 0; i < elements.size(); ++i) 2023-07-21T09:26:55,684 | ~~^~~~~~~~~~~~~~~~~ 2023-07-21T09:26:58,846 In file included from /usr/include/c++/10/map:60, 2023-07-21T09:26:58,847 from trisicell/external/scistree/RerootTreeUtils.cpp:8: 2023-07-21T09:26:58,847 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2023-07-21T09:26:58,847 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:26:58,847 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-07-21T09:26:58,847 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,101 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:27:00,102 from trisicell/external/scistree/RerootTreeUtils.cpp:6: 2023-07-21T09:27:00,102 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:27:00,102 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:27:00,102 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:27:00,102 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,600 In file included from /usr/include/c++/10/map:61, 2023-07-21T09:27:00,601 from trisicell/external/scistree/RerootTreeUtils.cpp:8: 2023-07-21T09:27:00,601 /usr/include/c++/10/bits/stl_map.h: In function ‘void buildGraph(std::vector >&, std::map >&, std::map, int>&)’: 2023-07-21T09:27:00,601 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:00,601 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:00,601 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,601 502 | std::tuple(__k), 2023-07-21T09:27:00,601 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,602 503 | std::tuple<>()); 2023-07-21T09:27:00,602 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,602 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:00,602 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:00,602 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,602 502 | std::tuple(__k), 2023-07-21T09:27:00,603 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,603 503 | std::tuple<>()); 2023-07-21T09:27:00,603 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,603 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:00,603 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:00,603 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,603 502 | std::tuple(__k), 2023-07-21T09:27:00,604 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,604 503 | std::tuple<>()); 2023-07-21T09:27:00,604 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,604 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:00,604 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:00,604 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,604 502 | std::tuple(__k), 2023-07-21T09:27:00,605 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:00,605 503 | std::tuple<>()); 2023-07-21T09:27:00,605 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,107 /usr/include/c++/10/bits/stl_map.h: In function ‘std::string convert(char*, char*)’: 2023-07-21T09:27:02,107 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:02,107 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:02,108 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,108 502 | std::tuple(__k), 2023-07-21T09:27:02,108 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,108 503 | std::tuple<>()); 2023-07-21T09:27:02,108 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,108 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:02,109 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:02,109 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,109 502 | std::tuple(__k), 2023-07-21T09:27:02,109 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,109 503 | std::tuple<>()); 2023-07-21T09:27:02,109 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,109 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:02,110 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:02,110 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,110 502 | std::tuple(__k), 2023-07-21T09:27:02,110 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,110 503 | std::tuple<>()); 2023-07-21T09:27:02,110 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,110 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:02,111 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:02,111 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,111 502 | std::tuple(__k), 2023-07-21T09:27:02,111 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,111 503 | std::tuple<>()); 2023-07-21T09:27:02,111 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,112 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:27:02,112 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:27:02,112 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,112 502 | std::tuple(__k), 2023-07-21T09:27:02,112 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,112 503 | std::tuple<>()); 2023-07-21T09:27:02,112 | ~~~~~~~~~~~~~~~ 2023-07-21T09:27:02,113 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:27:02,113 from trisicell/external/scistree/RerootTreeUtils.cpp:6: 2023-07-21T09:27:02,113 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:02,113 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:27:02,113 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:05,598 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistDoublet.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.o -O3 -std=c++11 -c 2023-07-21T09:27:10,561 trisicell/external/scistree/ScistDoublet.cpp:744:15: warning: ‘std::string GetNonDoubleName(const string&)’ defined but not used [-Wunused-function] 2023-07-21T09:27:10,561 744 | static string GetNonDoubleName(const string &strTaxon) 2023-07-21T09:27:10,561 | ^~~~~~~~~~~~~~~~ 2023-07-21T09:27:15,185 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:27:15,185 from trisicell/external/scistree/ScistDoublet.hpp:12, 2023-07-21T09:27:15,185 from trisicell/external/scistree/ScistDoublet.cpp:9: 2023-07-21T09:27:15,185 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2023-07-21T09:27:15,185 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-07-21T09:27:15,186 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:27:15,186 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:15,483 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:27:15,483 from trisicell/external/scistree/ScistDoublet.hpp:12, 2023-07-21T09:27:15,483 from trisicell/external/scistree/ScistDoublet.cpp:9: 2023-07-21T09:27:15,483 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void ScistDoublet::ConsDPTblDoubletNodes(const std::map&, const std::map&, int, ScistPerfPhyClusTreeNode*, std::map > >&) const’: 2023-07-21T09:27:15,483 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-07-21T09:27:15,484 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:15,484 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:15,484 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-07-21T09:27:15,484 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:15,484 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:15,485 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-07-21T09:27:15,485 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:15,485 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:15,487 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-07-21T09:27:15,488 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:15,488 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:21,310 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistErrRateInf.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.o -O3 -std=c++11 -c 2023-07-21T09:27:26,047 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistGenotype.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.o -O3 -std=c++11 -c 2023-07-21T09:27:42,377 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistPerfPhyImp.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.o -O3 -std=c++11 -c 2023-07-21T09:27:55,866 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:27:55,866 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2023-07-21T09:27:55,866 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2023-07-21T09:27:55,866 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:27:55,866 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:27:55,867 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:27:55,867 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:55,941 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:27:55,941 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2023-07-21T09:27:55,941 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2023-07-21T09:27:55,941 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void ScistPerfPhyMLE::Init()’: 2023-07-21T09:27:55,941 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:55,942 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:55,942 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:56,149 /usr/include/c++/10/bits/stl_vector.h: In member function ‘double ScistPerfPhyProbOnTree::CalcProbMaxForSiteGeno(int, ScistPerfPhyCluster&, ScistPerfPhyCluster&) const’: 2023-07-21T09:27:56,149 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:56,149 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:56,149 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:56,150 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:56,150 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:56,150 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:56,150 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:56,150 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:56,150 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:56,151 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:56,151 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:56,151 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:27:56,773 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:27:56,773 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2023-07-21T09:27:56,773 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2023-07-21T09:27:56,773 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:27:56,774 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:27:56,774 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:27:56,774 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:56,830 /usr/include/c++/10/bits/vector.tcc: In member function ‘double ScistPerfPhyProbOnTree::CalcProbMaxForSiteHap(int, ScistPerfPhyCluster&) const’: 2023-07-21T09:27:56,830 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:56,830 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:27:56,830 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:56,948 /usr/include/c++/10/bits/vector.tcc: In member function ‘double ScistPerfPhyProbOnTree::CalcProbForSiteHap(int, double, const std::vector >&) const’: 2023-07-21T09:27:56,948 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:56,948 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:27:56,948 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:27:57,438 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:27:57,438 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2023-07-21T09:27:57,438 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2023-07-21T09:27:57,438 /usr/include/c++/10/bits/stl_vector.h: In constructor ‘ScistPerfPhyProbOnTree::ScistPerfPhyProbOnTree(ScistGenGenotypeMat&, MarginalTree&)’: 2023-07-21T09:27:57,438 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:27:57,438 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:27:57,439 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:28:02,662 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistPerfPhyUtils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.o -O3 -std=c++11 -c 2023-07-21T09:28:10,974 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/TreeBuilder.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.o -O3 -std=c++11 -c 2023-07-21T09:28:18,744 In file included from /usr/include/c++/10/map:60, 2023-07-21T09:28:18,745 from trisicell/external/scistree/TreeBuilder.h:13, 2023-07-21T09:28:18,745 from trisicell/external/scistree/TreeBuilder.cpp:9: 2023-07-21T09:28:18,745 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: 2023-07-21T09:28:18,745 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:18,745 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-07-21T09:28:18,745 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:18,825 In file included from /usr/include/c++/10/map:61, 2023-07-21T09:28:18,826 from trisicell/external/scistree/TreeBuilder.h:13, 2023-07-21T09:28:18,826 from trisicell/external/scistree/TreeBuilder.cpp:9: 2023-07-21T09:28:18,826 /usr/include/c++/10/bits/stl_map.h: In member function ‘double PhyloDistance::GetDistance(int, int) const’: 2023-07-21T09:28:18,826 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:18,826 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:18,826 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:18,826 502 | std::tuple(__k), 2023-07-21T09:28:18,827 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:18,827 503 | std::tuple<>()); 2023-07-21T09:28:18,827 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:18,827 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:18,827 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:18,827 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:18,827 502 | std::tuple(__k), 2023-07-21T09:28:18,828 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:18,828 503 | std::tuple<>()); 2023-07-21T09:28:18,828 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,072 In file included from /usr/include/c++/10/map:60, 2023-07-21T09:28:19,073 from trisicell/external/scistree/TreeBuilder.h:13, 2023-07-21T09:28:19,073 from trisicell/external/scistree/TreeBuilder.cpp:9: 2023-07-21T09:28:19,073 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2023-07-21T09:28:19,073 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,073 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-07-21T09:28:19,073 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,200 In file included from /usr/include/c++/10/map:61, 2023-07-21T09:28:19,200 from trisicell/external/scistree/TreeBuilder.h:13, 2023-07-21T09:28:19,200 from trisicell/external/scistree/TreeBuilder.cpp:9: 2023-07-21T09:28:19,200 /usr/include/c++/10/bits/stl_map.h: In member function ‘void DistanceTreeBuilder::NJFindNgbrs(int, std::set&, int&, int&)’: 2023-07-21T09:28:19,200 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,201 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:19,201 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,201 502 | std::tuple(__k), 2023-07-21T09:28:19,201 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,201 503 | std::tuple<>()); 2023-07-21T09:28:19,201 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,201 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,202 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:19,202 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,202 502 | std::tuple(__k), 2023-07-21T09:28:19,202 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,202 503 | std::tuple<>()); 2023-07-21T09:28:19,202 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,202 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,203 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:19,203 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,203 502 | std::tuple(__k), 2023-07-21T09:28:19,203 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,203 503 | std::tuple<>()); 2023-07-21T09:28:19,203 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,203 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,203 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:19,204 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,204 502 | std::tuple(__k), 2023-07-21T09:28:19,204 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,204 503 | std::tuple<>()); 2023-07-21T09:28:19,204 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,204 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,204 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:19,205 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,205 502 | std::tuple(__k), 2023-07-21T09:28:19,205 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,205 503 | std::tuple<>()); 2023-07-21T09:28:19,205 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,205 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:19,205 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:19,205 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,206 502 | std::tuple(__k), 2023-07-21T09:28:19,206 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:19,206 503 | std::tuple<>()); 2023-07-21T09:28:19,206 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:21,700 In file included from /usr/include/c++/10/map:60, 2023-07-21T09:28:21,700 from trisicell/external/scistree/TreeBuilder.h:13, 2023-07-21T09:28:21,700 from trisicell/external/scistree/TreeBuilder.cpp:9: 2023-07-21T09:28:21,700 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >, std::set, std::allocator > >&>, std::tuple<>}; _Key = std::pair, std::set >; _Val = std::pair, std::set >, double>; _KeyOfValue = std::_Select1st, std::set >, double> >; _Compare = std::less, std::set > >; _Alloc = std::allocator, std::set >, double> >]’: 2023-07-21T09:28:21,701 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:21,701 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-07-21T09:28:21,701 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,358 In file included from /usr/include/c++/10/map:61, 2023-07-21T09:28:22,358 from trisicell/external/scistree/TreeBuilder.h:13, 2023-07-21T09:28:22,358 from trisicell/external/scistree/TreeBuilder.cpp:9: 2023-07-21T09:28:22,358 /usr/include/c++/10/bits/stl_map.h: In member function ‘void ConstrainedUPGMATreeBuilder::SetDistForTwoClusters(const std::set&, const std::set&, double)’: 2023-07-21T09:28:22,358 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:22,358 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:22,359 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,359 502 | std::tuple(__k), 2023-07-21T09:28:22,359 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,359 503 | std::tuple<>()); 2023-07-21T09:28:22,359 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,549 /usr/include/c++/10/bits/stl_map.h: In member function ‘void ConstrainedUPGMATreeBuilder::UpdateDistUPGMA(const std::set&, const std::set&)’: 2023-07-21T09:28:22,549 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:22,549 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:22,549 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,549 502 | std::tuple(__k), 2023-07-21T09:28:22,550 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,550 503 | std::tuple<>()); 2023-07-21T09:28:22,550 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,550 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:22,550 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:22,550 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,551 502 | std::tuple(__k), 2023-07-21T09:28:22,551 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:22,551 503 | std::tuple<>()); 2023-07-21T09:28:22,551 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:23,078 /usr/include/c++/10/bits/stl_map.h: In member function ‘void DistanceTreeBuilder::UpdateDistUPGMA(const std::pair, std::set >&, const std::map, std::pair, double> >&, std::map, std::set >, double>&)’: 2023-07-21T09:28:23,078 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:23,078 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:23,078 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:23,079 502 | std::tuple(__k), 2023-07-21T09:28:23,079 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:23,079 503 | std::tuple<>()); 2023-07-21T09:28:23,079 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:23,079 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:28:23,079 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:28:23,080 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:23,080 502 | std::tuple(__k), 2023-07-21T09:28:23,080 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:23,080 503 | std::tuple<>()); 2023-07-21T09:28:23,080 | ~~~~~~~~~~~~~~~ 2023-07-21T09:28:28,307 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/UnWeightedGraph.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.o -O3 -std=c++11 -c 2023-07-21T09:28:38,204 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.o -O3 -std=c++11 -c 2023-07-21T09:28:39,407 trisicell/external/scistree/Utils.cpp: In function ‘void DumpIntVec(const std::vector&)’: 2023-07-21T09:28:39,407 trisicell/external/scistree/Utils.cpp:175:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,407 175 | for(int i=0; i&, const std::vector&)’: 2023-07-21T09:28:39,408 trisicell/external/scistree/Utils.cpp:186:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,409 186 | for(int i=0; i&, const std::vector&)’: 2023-07-21T09:28:39,410 trisicell/external/scistree/Utils.cpp:216:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,411 216 | for(int i=0; i&, const std::vector&)’: 2023-07-21T09:28:39,440 trisicell/external/scistree/Utils.cpp:239:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,441 239 | for(int i=0; i&)’: 2023-07-21T09:28:39,444 trisicell/external/scistree/Utils.cpp:335:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,444 335 | for(int i=0; i&, const std::vector&)’: 2023-07-21T09:28:39,445 trisicell/external/scistree/Utils.cpp:389:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,445 389 | for(int j=i+1; j&, std::vector&)’: 2023-07-21T09:28:39,455 trisicell/external/scistree/Utils.cpp:634:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,455 634 | if(pos >= posvec.size() || i < posvec[pos] ) 2023-07-21T09:28:39,456 | ~~~~^~~~~~~~~~~~~~~~ 2023-07-21T09:28:39,465 trisicell/external/scistree/Utils.cpp: In function ‘void GetIntVec(int, const std::vector&, std::vector&)’: 2023-07-21T09:28:39,465 trisicell/external/scistree/Utils.cpp:657:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,466 657 | if(pos >= posvec.size() || i < posvec[pos] ) 2023-07-21T09:28:39,466 | ~~~~^~~~~~~~~~~~~~~~ 2023-07-21T09:28:39,516 trisicell/external/scistree/Utils.cpp: In function ‘bool GetNextPermutation(std::vector&, const std::vector&)’: 2023-07-21T09:28:39,516 trisicell/external/scistree/Utils.cpp:856:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,516 856 | for(int j=i+1; j::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,520 1003 | for(int i=brPt+1; i < s2.size(); ++i) 2023-07-21T09:28:39,520 | ~~^~~~~~~~~~~ 2023-07-21T09:28:39,530 trisicell/external/scistree/Utils.cpp: In function ‘void AddUniqueSeqToVec(const SEQUENCE&, std::vector >&)’: 2023-07-21T09:28:39,531 trisicell/external/scistree/Utils.cpp:1084:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,531 1084 | for(int i=0; i >&)’: 2023-07-21T09:28:39,532 trisicell/external/scistree/Utils.cpp:1096:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,532 1096 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,534 1124 | if(seedPos < 0 || seedPos >= seq1.size() ) 2023-07-21T09:28:39,534 | ~~~~~~~~^~~~~~~~~~~~~~ 2023-07-21T09:28:39,534 trisicell/external/scistree/Utils.cpp:1144:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,534 1144 | for(i=seedPos+1; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,535 1151 | if( i< seq1.size() ) 2023-07-21T09:28:39,535 | ~^~~~~~~~~~~~~ 2023-07-21T09:28:39,535 trisicell/external/scistree/Utils.cpp: In function ‘int IsSeqsMutPair(const SEQUENCE&, const SEQUENCE&)’: 2023-07-21T09:28:39,536 trisicell/external/scistree/Utils.cpp:1183:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,536 1183 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,537 1205 | for(int i=0; i&, const std::vector&, bool&)’: 2023-07-21T09:28:39,539 trisicell/external/scistree/Utils.cpp:1244:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,539 1244 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,540 1258 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,540 1274 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,541 1303 | for(int i=0; i&, std::vector&, std::vector&)’: 2023-07-21T09:28:39,542 trisicell/external/scistree/Utils.cpp:1357:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,542 1357 | for(int i=0; i&, const std::vector&)’: 2023-07-21T09:28:39,543 trisicell/external/scistree/Utils.cpp:1405:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,544 1405 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,544 1409 | for(int i=0; i&, std::vector&)’: 2023-07-21T09:28:39,545 trisicell/external/scistree/Utils.cpp:1440:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:28:39,545 1440 | for(int i=0; i&, std::set&)’ defined but not used [-Wunused-function] 2023-07-21T09:28:40,118 10 | static void MakeComplementSet( int start, int end, 2023-07-21T09:28:40,118 | ^~~~~~~~~~~~~~~~~ 2023-07-21T09:28:44,971 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils2.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.o -O3 -std=c++11 -c 2023-07-21T09:28:49,082 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils3.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.o -O3 -std=c++11 -c 2023-07-21T09:28:58,410 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:28:58,410 from trisicell/external/scistree/Utils3.h:5, 2023-07-21T09:28:58,411 from trisicell/external/scistree/Utils3.cpp:2: 2023-07-21T09:28:58,411 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:28:58,411 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:28:58,411 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:28:58,411 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:28:58,444 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:28:58,444 from trisicell/external/scistree/Utils3.h:5, 2023-07-21T09:28:58,444 from trisicell/external/scistree/Utils3.cpp:2: 2023-07-21T09:28:58,445 /usr/include/c++/10/bits/stl_vector.h: In function ‘double GetLogSumOfTwo(double, double)’: 2023-07-21T09:28:58,445 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:28:58,445 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:28:58,445 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:28:58,445 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:28:58,445 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:28:58,445 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:01,466 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils4.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.o -O3 -std=c++11 -c 2023-07-21T09:29:07,611 In file included from /usr/include/c++/10/set:60, 2023-07-21T09:29:07,611 from trisicell/external/scistree/Utils3.h:6, 2023-07-21T09:29:07,612 from trisicell/external/scistree/Utils4.h:12, 2023-07-21T09:29:07,612 from trisicell/external/scistree/Utils4.cpp:9: 2023-07-21T09:29:07,612 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: 2023-07-21T09:29:07,612 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:29:07,612 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-07-21T09:29:07,612 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,302 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:29:09,302 from trisicell/external/scistree/Utils3.h:5, 2023-07-21T09:29:09,302 from trisicell/external/scistree/Utils4.h:12, 2023-07-21T09:29:09,302 from trisicell/external/scistree/Utils4.cpp:9: 2023-07-21T09:29:09,303 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:29:09,303 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:29:09,303 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:29:09,303 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,338 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:29:09,339 from trisicell/external/scistree/Utils3.h:5, 2023-07-21T09:29:09,339 from trisicell/external/scistree/Utils4.h:12, 2023-07-21T09:29:09,339 from trisicell/external/scistree/Utils4.cpp:9: 2023-07-21T09:29:09,339 /usr/include/c++/10/bits/stl_vector.h: In function ‘void FindEvenDistriPoints(double, double, double, int, std::vector&)’: 2023-07-21T09:29:09,339 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:09,339 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:09,340 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:09,673 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:29:09,673 from trisicell/external/scistree/Utils3.h:5, 2023-07-21T09:29:09,674 from trisicell/external/scistree/Utils4.h:12, 2023-07-21T09:29:09,674 from trisicell/external/scistree/Utils4.cpp:9: 2023-07-21T09:29:09,674 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2023-07-21T09:29:09,674 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-07-21T09:29:09,674 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:29:09,674 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,911 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:29:09,912 from trisicell/external/scistree/Utils3.h:5, 2023-07-21T09:29:09,912 from trisicell/external/scistree/Utils4.h:12, 2023-07-21T09:29:09,912 from trisicell/external/scistree/Utils4.cpp:9: 2023-07-21T09:29:09,912 /usr/include/c++/10/bits/stl_vector.h: In function ‘void ClusterLinearPoints(const std::vector&, double, std::vector&)’: 2023-07-21T09:29:09,912 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-07-21T09:29:09,912 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:09,913 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:09,914 In file included from /usr/include/c++/10/map:61, 2023-07-21T09:29:09,914 from trisicell/external/scistree/Utils3.h:7, 2023-07-21T09:29:09,914 from trisicell/external/scistree/Utils4.h:12, 2023-07-21T09:29:09,914 from trisicell/external/scistree/Utils4.cpp:9: 2023-07-21T09:29:09,915 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:29:09,915 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:29:09,915 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,915 502 | std::tuple(__k), 2023-07-21T09:29:09,915 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,915 503 | std::tuple<>()); 2023-07-21T09:29:09,915 | ~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,916 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:29:09,916 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:29:09,916 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,916 502 | std::tuple(__k), 2023-07-21T09:29:09,916 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,916 503 | std::tuple<>()); 2023-07-21T09:29:09,916 | ~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,917 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:29:09,917 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:29:09,917 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,917 502 | std::tuple(__k), 2023-07-21T09:29:09,917 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,917 503 | std::tuple<>()); 2023-07-21T09:29:09,918 | ~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,918 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2023-07-21T09:29:09,918 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2023-07-21T09:29:09,918 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,918 502 | std::tuple(__k), 2023-07-21T09:29:09,918 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:09,918 503 | std::tuple<>()); 2023-07-21T09:29:09,919 | ~~~~~~~~~~~~~~~ 2023-07-21T09:29:13,396 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/UtilsNumerical.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.o -O3 -std=c++11 -c 2023-07-21T09:29:15,026 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/main.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/main.o -O3 -std=c++11 -c 2023-07-21T09:29:22,308 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_scistree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/main.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so 2023-07-21T09:29:24,182 building 'trisicell.external._scite' extension 2023-07-21T09:29:24,184 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scite 2023-07-21T09:29:24,185 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/_scite.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scite.o -O3 -std=c++11 -c 2023-07-21T09:29:25,712 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/findBestTrees.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.o -O3 -std=c++11 -c 2023-07-21T09:29:26,743 trisicell/external/scite/findBestTrees.cpp: In function ‘int* getParentVectorFromGVfile(std::string, int)’: 2023-07-21T09:29:26,744 trisicell/external/scite/findBestTrees.cpp:206:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:26,744 206 | for(int i=0; i < lines.size(); i++){ 2023-07-21T09:29:26,744 | ~~^~~~~~~~~~~~~~ 2023-07-21T09:29:26,753 trisicell/external/scite/findBestTrees.cpp: In function ‘int getMinDist(int*, std::vector, int)’: 2023-07-21T09:29:26,754 trisicell/external/scite/findBestTrees.cpp:222:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:26,754 222 | for(int i=0; i setMoveProbs()’: 2023-07-21T09:29:26,767 trisicell/external/scite/findBestTrees.cpp:356:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:26,768 356 | for(int i=0; i< treeMoves.size(); i++){ sum += treeMoves[i]; } 2023-07-21T09:29:26,768 | ~^~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:26,768 trisicell/external/scite/findBestTrees.cpp:359:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:26,768 359 | for(int i=0; i< treeMoves.size(); i++){ 2023-07-21T09:29:26,769 | ~^~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:26,769 trisicell/external/scite/findBestTrees.cpp:363:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:26,770 363 | for(int i=0; i< treeMoves.size(); i++){ cout << " " << treeMoves[i];} 2023-07-21T09:29:26,770 | ~^~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:26,770 trisicell/external/scite/findBestTrees.cpp:366:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:26,771 366 | for(int i=0; i< treeMoves.size(); i++){ 2023-07-21T09:29:26,771 | ~^~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:28,399 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:29:28,399 from trisicell/external/scite/findBestTrees.cpp:9: 2023-07-21T09:29:28,400 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:29:28,400 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:29:28,400 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:29:28,400 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:28,461 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:29:28,461 from trisicell/external/scite/findBestTrees.cpp:9: 2023-07-21T09:29:28,462 /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector setMoveProbs()’: 2023-07-21T09:29:28,462 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,462 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,462 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,462 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,463 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,463 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,463 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,463 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,463 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,463 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,463 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,464 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,464 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,464 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,464 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,464 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,464 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,464 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,464 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,465 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:28,465 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:28,541 In file included from /usr/include/c++/10/vector:72, 2023-07-21T09:29:28,541 from trisicell/external/scite/findBestTrees.cpp:9: 2023-07-21T09:29:28,542 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:29:28,542 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:29:28,542 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:29:28,542 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:28,542 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:29:28,570 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-07-21T09:29:28,570 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:28,571 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-07-21T09:29:28,571 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:31,937 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/matrices.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/matrices.o -O3 -std=c++11 -c 2023-07-21T09:29:33,688 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmc.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.o -O3 -std=c++11 -c 2023-07-21T09:29:35,007 trisicell/external/scite/mcmc.cpp: In function ‘std::string runMCMCbeta(std::vector&, double*, int, int, double, std::vector, int, int, int**, char, int*, int, bool, double, double, bool, char)’: 2023-07-21T09:29:35,007 trisicell/external/scite/mcmc.cpp:87:15: warning: variable ‘moveAccepted’ set but not used [-Wunused-but-set-variable] 2023-07-21T09:29:35,008 87 | bool moveAccepted = false; // Is the MCMC move accepted? 2023-07-21T09:29:35,008 | ^~~~~~~~~~~~ 2023-07-21T09:29:36,095 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmcBinTreeMove.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.o -O3 -std=c++11 -c 2023-07-21T09:29:37,182 trisicell/external/scite/mcmcBinTreeMove.cpp: In function ‘int pickNodeToMove(int*, int)’: 2023-07-21T09:29:37,183 trisicell/external/scite/mcmcBinTreeMove.cpp:75:1: warning: control reaches end of non-void function [-Wreturn-type] 2023-07-21T09:29:37,183 75 | } 2023-07-21T09:29:37,183 | ^ 2023-07-21T09:29:37,506 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmcTreeMove.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.o -O3 -std=c++11 -c 2023-07-21T09:29:38,829 trisicell/external/scite/mcmcTreeMove.cpp: In function ‘bool** getNewAncMatrix(bool**, int, std::vector, std::vector, int, bool**)’: 2023-07-21T09:29:38,830 trisicell/external/scite/mcmcTreeMove.cpp:177:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:38,830 177 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:38,831 178 | for(int j=0; j::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:38,831 185 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:38,831 186 | for(int j=0; j, int, int, double**, int**)’: 2023-07-21T09:29:40,725 trisicell/external/scite/output.cpp:298:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:40,725 298 | for(int i=0; i, int, std::string)’: 2023-07-21T09:29:40,737 trisicell/external/scite/output.cpp:320:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:40,737 320 | for(int i=0; i)’: 2023-07-21T09:29:45,214 trisicell/external/scite/rand.cpp:53:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:45,214 53 | for(int i=1; i)’: 2023-07-21T09:29:45,224 trisicell/external/scite/rand.cpp:96:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:45,224 96 | if (index != queue.size() - 1) 2023-07-21T09:29:45,224 | ~~~~~~^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:45,228 trisicell/external/scite/rand.cpp: In function ‘int* getRandomBinaryTree(int)’: 2023-07-21T09:29:45,228 trisicell/external/scite/rand.cpp:119:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:45,228 119 | if (pos != queue.size() - 1){queue[pos] = std::move(queue.back());} 2023-07-21T09:29:45,229 | ~~~~^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:45,229 trisicell/external/scite/rand.cpp:125:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:45,229 125 | if (pos != queue.size() - 1){queue[pos] = std::move(queue.back());} 2023-07-21T09:29:45,229 | ~~~~^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:45,714 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/scoreBinTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.o -O3 -std=c++11 -c 2023-07-21T09:29:46,670 trisicell/external/scite/scoreBinTree.cpp: In function ‘double getBinTreeScore(int**, int, int, double**, int*)’: 2023-07-21T09:29:46,670 trisicell/external/scite/scoreBinTree.cpp:78:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:46,670 78 | for(int i=0; i&, int)’: 2023-07-21T09:29:49,700 trisicell/external/scite/treelist.cpp:51:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:49,700 51 | for(int i=0; i&, int)’: 2023-07-21T09:29:49,709 trisicell/external/scite/treelist.cpp:59:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:49,709 59 | for(int i=0; i&, int*, int)’: 2023-07-21T09:29:49,710 trisicell/external/scite/treelist.cpp:75:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:49,710 75 | for(int k=0; k::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const treeBeta&}; _Tp = treeBeta; _Alloc = std::allocator]’: 2023-07-21T09:29:49,957 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:29:49,957 426 | vector<_Tp, _Alloc>:: 2023-07-21T09:29:49,958 | ^~~~~~~~~~~~~~~~~~~ 2023-07-21T09:29:49,958 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-07-21T09:29:49,989 In file included from /usr/include/c++/10/vector:67, 2023-07-21T09:29:49,990 from trisicell/external/scite/treelist.cpp:10: 2023-07-21T09:29:49,990 /usr/include/c++/10/bits/stl_vector.h: In function ‘void resetTreeList(std::vector&, int*, int, double)’: 2023-07-21T09:29:49,990 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:49,990 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:49,990 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:50,004 /usr/include/c++/10/bits/stl_vector.h: In function ‘void updateTreeList(std::vector&, int*, int, double, double, double)’: 2023-07-21T09:29:50,005 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-07-21T09:29:50,005 1198 | _M_realloc_insert(end(), __x); 2023-07-21T09:29:50,005 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-07-21T09:29:50,104 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/trees.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/trees.o -O3 -std=c++11 -c 2023-07-21T09:29:51,134 trisicell/external/scite/trees.cpp: In function ‘int countBranches(int*, int)’: 2023-07-21T09:29:51,135 trisicell/external/scite/trees.cpp:55:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:51,135 55 | for(int i=0; i >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:51,135 58 | for(int i=0; i >&)’: 2023-07-21T09:29:51,137 trisicell/external/scite/trees.cpp:76:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:51,137 76 | for(int i=0; i >, int)’: 2023-07-21T09:29:51,139 trisicell/external/scite/trees.cpp:90:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:51,139 90 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:51,143 114 | for(int j=0; j >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-07-21T09:29:51,143 118 | for(int i=0; i build/bdist.linux-armv7l/wheel/trisicell/pl 2023-07-21T09:29:52,991 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2023-07-21T09:29:52,993 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2023-07-21T09:29:52,995 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_data.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2023-07-21T09:29:52,997 creating build/bdist.linux-armv7l/wheel/trisicell/settings 2023-07-21T09:29:52,998 copying build/lib.linux-armv7l-cpython-39/trisicell/settings/_settings.py -> build/bdist.linux-armv7l/wheel/trisicell/settings 2023-07-21T09:29:53,000 copying build/lib.linux-armv7l-cpython-39/trisicell/settings/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/settings 2023-07-21T09:29:53,002 creating build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,003 creating build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,005 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_utils_ilp.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,007 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_gpps_ilp.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,009 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_gpps_hc.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,011 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_utils_hc.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,014 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,015 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_nh2lgf.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2023-07-21T09:29:53,017 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,019 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,021 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,025 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,425 creating build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2023-07-21T09:29:53,426 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scprob/main.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2023-07-21T09:29:53,428 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scprob/main.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2023-07-21T09:29:53,430 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mp3.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,432 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,443 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,445 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,450 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,486 creating build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2023-07-21T09:29:53,487 copying build/lib.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.h -> build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2023-07-21T09:29:53,489 copying build/lib.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2023-07-21T09:29:53,491 copying build/lib.linux-armv7l-cpython-39/trisicell/external/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,493 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,511 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,515 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,520 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_betabinom.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,524 creating build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,525 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,527 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,529 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/main.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,531 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,532 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,536 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,539 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,541 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,543 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,546 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,548 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,551 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,553 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/main.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,555 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,557 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,560 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,562 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,565 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,567 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,570 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,573 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,575 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,578 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,580 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,583 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,586 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,590 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,592 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,595 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,596 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,599 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,601 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ctpl_stl.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,603 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,605 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,611 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,613 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,616 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,618 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,621 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,623 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,625 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,628 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,630 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2023-07-21T09:29:53,633 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2023-07-21T09:29:53,635 creating build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,636 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,639 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/rand.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,640 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,643 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/output.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,645 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/matrices.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,647 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,649 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,651 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,653 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,656 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,657 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/treelist.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,660 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,662 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/treelist.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,663 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,665 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/output.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,667 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,669 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/matrices.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,671 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/trees.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,673 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/trees.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,675 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/rand.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,677 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,679 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2023-07-21T09:29:53,682 creating build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,683 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_mcalling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,685 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_scite.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,687 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_partf.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,689 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_huntress.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,691 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/trisicell.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,693 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_consensus.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,695 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_phiscs.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,697 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,699 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_onconem.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,700 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_scistree.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,702 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_search.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,704 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_sphyr.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,706 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,708 creating build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,709 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s03indexing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,711 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z03clean.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,713 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s09expressing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,715 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s02mapping.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,717 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s04mapping.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,720 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s05calling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,722 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s06jointcalling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,723 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s07merging.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,725 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,727 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s01indexing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,729 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z01status.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,731 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z02matrixing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,733 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s08annotating.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,735 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s10velocitying.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2023-07-21T09:29:53,737 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_score.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,740 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_siclonefit.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,742 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_bnb.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,744 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_gpps.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,746 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_grmt.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,748 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_booster.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2023-07-21T09:29:53,751 creating build/bdist.linux-armv7l/wheel/trisicell/pp 2023-07-21T09:29:53,752 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_readcount.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2023-07-21T09:29:53,755 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_bifiltering.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2023-07-21T09:29:53,757 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_binary.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2023-07-21T09:29:53,760 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2023-07-21T09:29:53,762 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2023-07-21T09:29:53,764 copying build/lib.linux-armv7l-cpython-39/trisicell/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell 2023-07-21T09:29:53,767 creating build/bdist.linux-armv7l/wheel/trisicell/io 2023-07-21T09:29:53,768 copying build/lib.linux-armv7l-cpython-39/trisicell/io/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2023-07-21T09:29:53,770 copying build/lib.linux-armv7l-cpython-39/trisicell/io/_genotype.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2023-07-21T09:29:53,772 copying build/lib.linux-armv7l-cpython-39/trisicell/io/_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2023-07-21T09:29:53,775 creating build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,776 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,779 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_servers.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,782 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,784 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_packages.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,786 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_utils.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,789 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_hclustering.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2023-07-21T09:29:53,792 creating build/bdist.linux-armv7l/wheel/trisicell/logging 2023-07-21T09:29:53,793 copying build/lib.linux-armv7l-cpython-39/trisicell/logging/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/logging 2023-07-21T09:29:53,795 copying build/lib.linux-armv7l-cpython-39/trisicell/logging/_logging.py -> build/bdist.linux-armv7l/wheel/trisicell/logging 2023-07-21T09:29:53,798 creating build/bdist.linux-armv7l/wheel/trisicell/datasets 2023-07-21T09:29:53,799 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2023-07-21T09:29:53,801 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/genotype.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2023-07-21T09:29:53,809 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/expression.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2023-07-21T09:29:53,943 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/_simulate.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2023-07-21T09:29:53,945 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2023-07-21T09:29:53,947 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/_datasets.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2023-07-21T09:29:53,949 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2023-07-21T09:29:53,950 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal2.rc.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2023-07-21T09:29:53,954 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/ovarian.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2023-07-21T09:29:54,215 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal2.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2023-07-21T09:29:54,219 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,220 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,223 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/test.tsv -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,225 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/T06.nwk -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,227 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/T00.nwk -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,229 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,233 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,234 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell3_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,236 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell7_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,238 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell6_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,240 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell5_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,242 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell7_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,244 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell1_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,246 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell0_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,249 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell5_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,251 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell8_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,253 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell0_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,255 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell8_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,257 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell6_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,259 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell4_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,261 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell9_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,263 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell9_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,265 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell3_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,267 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell4_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,269 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell2_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,271 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell1_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,273 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell2_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2023-07-21T09:29:54,275 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling_config.yml -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2023-07-21T09:29:54,278 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,279 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,284 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,287 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,290 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,294 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,298 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,310 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2023-07-21T09:29:54,317 creating build/bdist.linux-armv7l/wheel/trisicell/tl 2023-07-21T09:29:54,319 creating build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2023-07-21T09:29:54,320 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_pf.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2023-07-21T09:29:54,322 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2023-07-21T09:29:54,324 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_partition_function.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2023-07-21T09:29:54,327 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_clt_sampler.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2023-07-21T09:29:54,329 creating build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2023-07-21T09:29:54,331 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/cna/_cna.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2023-07-21T09:29:54,333 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/cna/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2023-07-21T09:29:54,336 creating build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2023-07-21T09:29:54,337 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch/_fitch.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2023-07-21T09:29:54,339 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2023-07-21T09:29:54,342 creating build/bdist.linux-armv7l/wheel/trisicell/tl/score 2023-07-21T09:29:54,343 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2023-07-21T09:29:54,345 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/_ours.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2023-07-21T09:29:54,348 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/_others.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2023-07-21T09:29:54,351 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl 2023-07-21T09:29:54,353 creating build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2023-07-21T09:29:54,355 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/_consensus.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2023-07-21T09:29:54,357 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2023-07-21T09:29:54,359 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/_consensus_day.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2023-07-21T09:29:54,362 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,363 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scite.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,366 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sbm.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,368 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2023-07-21T09:29:54,369 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress/_huntress.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2023-07-21T09:29:54,373 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2023-07-21T09:29:54,376 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2023-07-21T09:29:54,377 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2023-07-21T09:29:54,379 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_dependencies.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2023-07-21T09:29:54,382 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_reconstruct_big_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2023-07-21T09:29:54,385 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_subsamples.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2023-07-21T09:29:54,387 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_booster.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2023-07-21T09:29:54,389 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_phiscs.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,392 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_onconem.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,394 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scistree.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,397 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scelestial.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,400 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sphyr.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,402 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,404 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_siclonefit.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,406 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_dendro.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,408 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sciphi.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,411 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_cellphy.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,413 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_bnb.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,416 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_cardelino.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,418 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sasc.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,420 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_gpps.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,423 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_grmt.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2023-07-21T09:29:54,425 creating build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,427 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_scores.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,429 copying build/lib.linux-armv7l-cpython-39/tests/test_commands.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,432 copying build/lib.linux-armv7l-cpython-39/tests/test_io.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,434 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_partition_function.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,436 copying build/lib.linux-armv7l-cpython-39/tests/test_pp.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,438 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_consensus.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,440 copying build/lib.linux-armv7l-cpython-39/tests/test_ul.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,442 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_solvers_tmp.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,445 copying build/lib.linux-armv7l-cpython-39/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,447 copying build/lib.linux-armv7l-cpython-39/tests/test_datasets.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,449 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_solvers.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,451 copying build/lib.linux-armv7l-cpython-39/tests/test_logging.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,453 copying build/lib.linux-armv7l-cpython-39/tests/test_pl.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,455 copying build/lib.linux-armv7l-cpython-39/tests/_helpers.py -> build/bdist.linux-armv7l/wheel/tests 2023-07-21T09:29:54,457 running install_egg_info 2023-07-21T09:29:54,469 Copying trisicell.egg-info to build/bdist.linux-armv7l/wheel/trisicell-0.2.2-py3.9.egg-info 2023-07-21T09:29:54,483 running install_scripts 2023-07-21T09:29:54,544 creating build/bdist.linux-armv7l/wheel/trisicell-0.2.2.dist-info/WHEEL 2023-07-21T09:29:54,547 creating '/tmp/pip-wheel-wc1dnrxe/.tmp-l7m0ij8i/trisicell-0.2.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-21T09:29:54,550 adding 'tests/__init__.py' 2023-07-21T09:29:54,552 adding 'tests/_helpers.py' 2023-07-21T09:29:54,553 adding 'tests/test_commands.py' 2023-07-21T09:29:54,555 adding 'tests/test_datasets.py' 2023-07-21T09:29:54,556 adding 'tests/test_io.py' 2023-07-21T09:29:54,558 adding 'tests/test_logging.py' 2023-07-21T09:29:54,560 adding 'tests/test_pl.py' 2023-07-21T09:29:54,561 adding 'tests/test_pp.py' 2023-07-21T09:29:54,563 adding 'tests/test_tl_consensus.py' 2023-07-21T09:29:54,564 adding 'tests/test_tl_partition_function.py' 2023-07-21T09:29:54,566 adding 'tests/test_tl_scores.py' 2023-07-21T09:29:54,568 adding 'tests/test_tl_solvers.py' 2023-07-21T09:29:54,569 adding 'tests/test_tl_solvers_tmp.py' 2023-07-21T09:29:54,571 adding 'tests/test_ul.py' 2023-07-21T09:29:54,573 adding 'trisicell/__init__.py' 2023-07-21T09:29:54,575 adding 'trisicell/commands/__init__.py' 2023-07-21T09:29:54,577 adding 'trisicell/commands/_bnb.py' 2023-07-21T09:29:54,579 adding 'trisicell/commands/_booster.py' 2023-07-21T09:29:54,580 adding 'trisicell/commands/_consensus.py' 2023-07-21T09:29:54,582 adding 'trisicell/commands/_gpps.py' 2023-07-21T09:29:54,584 adding 'trisicell/commands/_grmt.py' 2023-07-21T09:29:54,585 adding 'trisicell/commands/_huntress.py' 2023-07-21T09:29:54,587 adding 'trisicell/commands/_mcalling.py' 2023-07-21T09:29:54,589 adding 'trisicell/commands/_onconem.py' 2023-07-21T09:29:54,591 adding 'trisicell/commands/_partf.py' 2023-07-21T09:29:54,592 adding 'trisicell/commands/_phiscs.py' 2023-07-21T09:29:54,594 adding 'trisicell/commands/_scistree.py' 2023-07-21T09:29:54,596 adding 'trisicell/commands/_scite.py' 2023-07-21T09:29:54,598 adding 'trisicell/commands/_score.py' 2023-07-21T09:29:54,600 adding 'trisicell/commands/_search.py' 2023-07-21T09:29:54,602 adding 'trisicell/commands/_siclonefit.py' 2023-07-21T09:29:54,604 adding 'trisicell/commands/_sphyr.py' 2023-07-21T09:29:54,605 adding 'trisicell/commands/_trees.py' 2023-07-21T09:29:54,607 adding 'trisicell/commands/trisicell.py' 2023-07-21T09:29:54,609 adding 'trisicell/commands/mcalling/__init__.py' 2023-07-21T09:29:54,611 adding 'trisicell/commands/mcalling/s01indexing.py' 2023-07-21T09:29:54,613 adding 'trisicell/commands/mcalling/s02mapping.py' 2023-07-21T09:29:54,615 adding 'trisicell/commands/mcalling/s03indexing.py' 2023-07-21T09:29:54,617 adding 'trisicell/commands/mcalling/s04mapping.py' 2023-07-21T09:29:54,619 adding 'trisicell/commands/mcalling/s05calling.py' 2023-07-21T09:29:54,621 adding 'trisicell/commands/mcalling/s06jointcalling.py' 2023-07-21T09:29:54,623 adding 'trisicell/commands/mcalling/s07merging.py' 2023-07-21T09:29:54,624 adding 'trisicell/commands/mcalling/s08annotating.py' 2023-07-21T09:29:54,626 adding 'trisicell/commands/mcalling/s09expressing.py' 2023-07-21T09:29:54,628 adding 'trisicell/commands/mcalling/s10velocitying.py' 2023-07-21T09:29:54,630 adding 'trisicell/commands/mcalling/z01status.py' 2023-07-21T09:29:54,632 adding 'trisicell/commands/mcalling/z02matrixing.py' 2023-07-21T09:29:54,634 adding 'trisicell/commands/mcalling/z03clean.py' 2023-07-21T09:29:54,636 adding 'trisicell/datasets/__init__.py' 2023-07-21T09:29:54,639 adding 'trisicell/datasets/_datasets.py' 2023-07-21T09:29:54,641 adding 'trisicell/datasets/_simulate.py' 2023-07-21T09:29:55,691 adding 'trisicell/datasets/data/expression.h5ad.gz' 2023-07-21T09:29:55,764 adding 'trisicell/datasets/data/genotype.h5ad.gz' 2023-07-21T09:29:55,772 adding 'trisicell/datasets/real/colorectal2.h5ad' 2023-07-21T09:29:55,782 adding 'trisicell/datasets/real/colorectal2.rc.h5ad' 2023-07-21T09:29:58,208 adding 'trisicell/datasets/real/ovarian.h5ad.gz' 2023-07-21T09:29:58,324 adding 'trisicell/datasets/test/T00.nwk' 2023-07-21T09:29:58,326 adding 'trisicell/datasets/test/T06.nwk' 2023-07-21T09:29:58,327 adding 'trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix' 2023-07-21T09:29:58,330 adding 'trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix' 2023-07-21T09:29:58,331 adding 'trisicell/datasets/test/mcalling_config.yml' 2023-07-21T09:29:58,333 adding 'trisicell/datasets/test/test.tsv' 2023-07-21T09:29:58,368 adding 'trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix' 2023-07-21T09:29:58,376 adding 'trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix' 2023-07-21T09:29:58,450 adding 'trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix' 2023-07-21T09:29:58,460 adding 'trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix' 2023-07-21T09:29:58,466 adding 'trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix' 2023-07-21T09:29:58,488 adding 'trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix' 2023-07-21T09:29:58,507 adding 'trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix' 2023-07-21T09:29:58,510 adding 'trisicell/datasets/test/mcalling/cell0_1.fastq.gz' 2023-07-21T09:29:58,512 adding 'trisicell/datasets/test/mcalling/cell0_2.fastq.gz' 2023-07-21T09:29:58,513 adding 'trisicell/datasets/test/mcalling/cell1_1.fastq.gz' 2023-07-21T09:29:58,514 adding 'trisicell/datasets/test/mcalling/cell1_2.fastq.gz' 2023-07-21T09:29:58,516 adding 'trisicell/datasets/test/mcalling/cell2_1.fastq.gz' 2023-07-21T09:29:58,517 adding 'trisicell/datasets/test/mcalling/cell2_2.fastq.gz' 2023-07-21T09:29:58,518 adding 'trisicell/datasets/test/mcalling/cell3_1.fastq.gz' 2023-07-21T09:29:58,520 adding 'trisicell/datasets/test/mcalling/cell3_2.fastq.gz' 2023-07-21T09:29:58,521 adding 'trisicell/datasets/test/mcalling/cell4_1.fastq.gz' 2023-07-21T09:29:58,523 adding 'trisicell/datasets/test/mcalling/cell4_2.fastq.gz' 2023-07-21T09:29:58,524 adding 'trisicell/datasets/test/mcalling/cell5_1.fastq.gz' 2023-07-21T09:29:58,526 adding 'trisicell/datasets/test/mcalling/cell5_2.fastq.gz' 2023-07-21T09:29:58,528 adding 'trisicell/datasets/test/mcalling/cell6_1.fastq.gz' 2023-07-21T09:29:58,530 adding 'trisicell/datasets/test/mcalling/cell6_2.fastq.gz' 2023-07-21T09:29:58,531 adding 'trisicell/datasets/test/mcalling/cell7_1.fastq.gz' 2023-07-21T09:29:58,532 adding 'trisicell/datasets/test/mcalling/cell7_2.fastq.gz' 2023-07-21T09:29:58,534 adding 'trisicell/datasets/test/mcalling/cell8_1.fastq.gz' 2023-07-21T09:29:58,535 adding 'trisicell/datasets/test/mcalling/cell8_2.fastq.gz' 2023-07-21T09:29:58,536 adding 'trisicell/datasets/test/mcalling/cell9_1.fastq.gz' 2023-07-21T09:29:58,538 adding 'trisicell/datasets/test/mcalling/cell9_2.fastq.gz' 2023-07-21T09:29:58,540 adding 'trisicell/external/__init__.py' 2023-07-21T09:29:58,545 adding 'trisicell/external/_betabinom.py' 2023-07-21T09:29:58,558 adding 'trisicell/external/_mltd.cpp' 2023-07-21T09:29:58,700 adding 'trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so' 2023-07-21T09:29:58,706 adding 'trisicell/external/_mltd.pyx' 2023-07-21T09:29:58,708 adding 'trisicell/external/_mp3.py' 2023-07-21T09:29:58,720 adding 'trisicell/external/_scistree.cpp' 2023-07-21T09:30:02,781 adding 'trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so' 2023-07-21T09:30:02,935 adding 'trisicell/external/_scistree.pyx' 2023-07-21T09:30:02,946 adding 'trisicell/external/_scite.cpp' 2023-07-21T09:30:03,292 adding 'trisicell/external/_scite.cpython-39-arm-linux-gnueabihf.so' 2023-07-21T09:30:03,304 adding 'trisicell/external/_scite.pyx' 2023-07-21T09:30:03,315 adding 'trisicell/external/_scprob.cpp' 2023-07-21T09:30:03,423 adding 'trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so' 2023-07-21T09:30:03,427 adding 'trisicell/external/_scprob.pyx' 2023-07-21T09:30:03,429 adding 'trisicell/external/gpps/__init__.py' 2023-07-21T09:30:03,430 adding 'trisicell/external/gpps/_gpps_hc.py' 2023-07-21T09:30:03,432 adding 'trisicell/external/gpps/_gpps_ilp.py' 2023-07-21T09:30:03,433 adding 'trisicell/external/gpps/_nh2lgf.py' 2023-07-21T09:30:03,435 adding 'trisicell/external/gpps/_utils_hc.py' 2023-07-21T09:30:03,436 adding 'trisicell/external/gpps/_utils_ilp.py' 2023-07-21T09:30:03,439 adding 'trisicell/external/mltd/mltd.cpp' 2023-07-21T09:30:03,440 adding 'trisicell/external/mltd/mltd.h' 2023-07-21T09:30:03,446 adding 'trisicell/external/scistree/BinaryMatrix.cpp' 2023-07-21T09:30:03,448 adding 'trisicell/external/scistree/BinaryMatrix.h' 2023-07-21T09:30:03,451 adding 'trisicell/external/scistree/BioSequenceMatrix.cpp' 2023-07-21T09:30:03,453 adding 'trisicell/external/scistree/BioSequenceMatrix.h' 2023-07-21T09:30:03,454 adding 'trisicell/external/scistree/GenotypeMatrix.cpp' 2023-07-21T09:30:03,456 adding 'trisicell/external/scistree/GenotypeMatrix.h' 2023-07-21T09:30:03,467 adding 'trisicell/external/scistree/MarginalTree.cpp' 2023-07-21T09:30:03,469 adding 'trisicell/external/scistree/MarginalTree.h' 2023-07-21T09:30:03,472 adding 'trisicell/external/scistree/PhylogenyTree.cpp' 2023-07-21T09:30:03,474 adding 'trisicell/external/scistree/PhylogenyTree.h' 2023-07-21T09:30:03,494 adding 'trisicell/external/scistree/PhylogenyTreeBasic.cpp' 2023-07-21T09:30:03,497 adding 'trisicell/external/scistree/PhylogenyTreeBasic.h' 2023-07-21T09:30:03,506 adding 'trisicell/external/scistree/RBT.cpp' 2023-07-21T09:30:03,509 adding 'trisicell/external/scistree/RBT.h' 2023-07-21T09:30:03,511 adding 'trisicell/external/scistree/RerootTreeUtils.cpp' 2023-07-21T09:30:03,512 adding 'trisicell/external/scistree/RerootTreeUtils.h' 2023-07-21T09:30:03,517 adding 'trisicell/external/scistree/ScistDoublet.cpp' 2023-07-21T09:30:03,519 adding 'trisicell/external/scistree/ScistDoublet.hpp' 2023-07-21T09:30:03,520 adding 'trisicell/external/scistree/ScistErrRateInf.cpp' 2023-07-21T09:30:03,522 adding 'trisicell/external/scistree/ScistErrRateInf.hpp' 2023-07-21T09:30:03,525 adding 'trisicell/external/scistree/ScistGenotype.cpp' 2023-07-21T09:30:03,527 adding 'trisicell/external/scistree/ScistGenotype.hpp' 2023-07-21T09:30:03,531 adding 'trisicell/external/scistree/ScistPerfPhyImp.cpp' 2023-07-21T09:30:03,533 adding 'trisicell/external/scistree/ScistPerfPhyImp.hpp' 2023-07-21T09:30:03,535 adding 'trisicell/external/scistree/ScistPerfPhyUtils.cpp' 2023-07-21T09:30:03,537 adding 'trisicell/external/scistree/ScistPerfPhyUtils.hpp' 2023-07-21T09:30:03,541 adding 'trisicell/external/scistree/TreeBuilder.cpp' 2023-07-21T09:30:03,543 adding 'trisicell/external/scistree/TreeBuilder.h' 2023-07-21T09:30:03,547 adding 'trisicell/external/scistree/UnWeightedGraph.cpp' 2023-07-21T09:30:03,549 adding 'trisicell/external/scistree/UnWeightedGraph.h' 2023-07-21T09:30:03,553 adding 'trisicell/external/scistree/Utils.cpp' 2023-07-21T09:30:03,555 adding 'trisicell/external/scistree/Utils.h' 2023-07-21T09:30:03,557 adding 'trisicell/external/scistree/Utils2.cpp' 2023-07-21T09:30:03,559 adding 'trisicell/external/scistree/Utils2.h' 2023-07-21T09:30:03,567 adding 'trisicell/external/scistree/Utils3.cpp' 2023-07-21T09:30:03,570 adding 'trisicell/external/scistree/Utils3.h' 2023-07-21T09:30:03,573 adding 'trisicell/external/scistree/Utils4.cpp' 2023-07-21T09:30:03,579 adding 'trisicell/external/scistree/Utils4.h' 2023-07-21T09:30:03,581 adding 'trisicell/external/scistree/UtilsNumerical.cpp' 2023-07-21T09:30:03,582 adding 'trisicell/external/scistree/UtilsNumerical.h' 2023-07-21T09:30:03,584 adding 'trisicell/external/scistree/ctpl_stl.h' 2023-07-21T09:30:03,586 adding 'trisicell/external/scistree/main.cpp' 2023-07-21T09:30:03,588 adding 'trisicell/external/scistree/main.h' 2023-07-21T09:30:03,590 adding 'trisicell/external/scite/findBestTrees.cpp' 2023-07-21T09:30:03,592 adding 'trisicell/external/scite/findBestTrees.h' 2023-07-21T09:30:03,593 adding 'trisicell/external/scite/matrices.cpp' 2023-07-21T09:30:03,594 adding 'trisicell/external/scite/matrices.h' 2023-07-21T09:30:03,597 adding 'trisicell/external/scite/mcmc.cpp' 2023-07-21T09:30:03,598 adding 'trisicell/external/scite/mcmc.h' 2023-07-21T09:30:03,599 adding 'trisicell/external/scite/mcmcBinTreeMove.cpp' 2023-07-21T09:30:03,601 adding 'trisicell/external/scite/mcmcBinTreeMove.h' 2023-07-21T09:30:03,603 adding 'trisicell/external/scite/mcmcTreeMove.cpp' 2023-07-21T09:30:03,604 adding 'trisicell/external/scite/mcmcTreeMove.h' 2023-07-21T09:30:03,606 adding 'trisicell/external/scite/output.cpp' 2023-07-21T09:30:03,607 adding 'trisicell/external/scite/output.h' 2023-07-21T09:30:03,609 adding 'trisicell/external/scite/rand.cpp' 2023-07-21T09:30:03,610 adding 'trisicell/external/scite/rand.h' 2023-07-21T09:30:03,611 adding 'trisicell/external/scite/scoreBinTree.cpp' 2023-07-21T09:30:03,613 adding 'trisicell/external/scite/scoreBinTree.h' 2023-07-21T09:30:03,615 adding 'trisicell/external/scite/scoreTree.cpp' 2023-07-21T09:30:03,616 adding 'trisicell/external/scite/scoreTree.h' 2023-07-21T09:30:03,617 adding 'trisicell/external/scite/treelist.cpp' 2023-07-21T09:30:03,619 adding 'trisicell/external/scite/treelist.h' 2023-07-21T09:30:03,620 adding 'trisicell/external/scite/trees.cpp' 2023-07-21T09:30:03,622 adding 'trisicell/external/scite/trees.h' 2023-07-21T09:30:03,626 adding 'trisicell/external/scprob/main.cpp' 2023-07-21T09:30:03,627 adding 'trisicell/external/scprob/main.h' 2023-07-21T09:30:03,629 adding 'trisicell/io/__init__.py' 2023-07-21T09:30:03,630 adding 'trisicell/io/_genotype.py' 2023-07-21T09:30:03,631 adding 'trisicell/io/_tree.py' 2023-07-21T09:30:03,633 adding 'trisicell/logging/__init__.py' 2023-07-21T09:30:03,634 adding 'trisicell/logging/_logging.py' 2023-07-21T09:30:03,636 adding 'trisicell/pl/__init__.py' 2023-07-21T09:30:03,637 adding 'trisicell/pl/_data.py' 2023-07-21T09:30:03,639 adding 'trisicell/pl/_helper.py' 2023-07-21T09:30:03,641 adding 'trisicell/pl/_trees.py' 2023-07-21T09:30:03,643 adding 'trisicell/pp/__init__.py' 2023-07-21T09:30:03,644 adding 'trisicell/pp/_bifiltering.py' 2023-07-21T09:30:03,645 adding 'trisicell/pp/_binary.py' 2023-07-21T09:30:03,647 adding 'trisicell/pp/_readcount.py' 2023-07-21T09:30:03,649 adding 'trisicell/pp/_tree.py' 2023-07-21T09:30:03,650 adding 'trisicell/settings/__init__.py' 2023-07-21T09:30:03,651 adding 'trisicell/settings/_settings.py' 2023-07-21T09:30:03,653 adding 'trisicell/tl/__init__.py' 2023-07-21T09:30:03,655 adding 'trisicell/tl/cna/__init__.py' 2023-07-21T09:30:03,656 adding 'trisicell/tl/cna/_cna.py' 2023-07-21T09:30:03,658 adding 'trisicell/tl/consensus/__init__.py' 2023-07-21T09:30:03,659 adding 'trisicell/tl/consensus/_consensus.py' 2023-07-21T09:30:03,661 adding 'trisicell/tl/consensus/_consensus_day.py' 2023-07-21T09:30:03,662 adding 'trisicell/tl/fitch/__init__.py' 2023-07-21T09:30:03,663 adding 'trisicell/tl/fitch/_fitch.py' 2023-07-21T09:30:03,665 adding 'trisicell/tl/partition_function/__init__.py' 2023-07-21T09:30:03,667 adding 'trisicell/tl/partition_function/_clt_sampler.py' 2023-07-21T09:30:03,668 adding 'trisicell/tl/partition_function/_partition_function.py' 2023-07-21T09:30:03,670 adding 'trisicell/tl/partition_function/_pf.py' 2023-07-21T09:30:03,671 adding 'trisicell/tl/score/__init__.py' 2023-07-21T09:30:03,673 adding 'trisicell/tl/score/_others.py' 2023-07-21T09:30:03,674 adding 'trisicell/tl/score/_ours.py' 2023-07-21T09:30:03,676 adding 'trisicell/tl/solver/__init__.py' 2023-07-21T09:30:03,680 adding 'trisicell/tl/solver/_bnb.py' 2023-07-21T09:30:03,682 adding 'trisicell/tl/solver/_cardelino.py' 2023-07-21T09:30:03,683 adding 'trisicell/tl/solver/_cellphy.py' 2023-07-21T09:30:03,684 adding 'trisicell/tl/solver/_dendro.py' 2023-07-21T09:30:03,686 adding 'trisicell/tl/solver/_gpps.py' 2023-07-21T09:30:03,687 adding 'trisicell/tl/solver/_grmt.py' 2023-07-21T09:30:03,688 adding 'trisicell/tl/solver/_onconem.py' 2023-07-21T09:30:03,691 adding 'trisicell/tl/solver/_phiscs.py' 2023-07-21T09:30:03,692 adding 'trisicell/tl/solver/_sasc.py' 2023-07-21T09:30:03,694 adding 'trisicell/tl/solver/_sbm.py' 2023-07-21T09:30:03,695 adding 'trisicell/tl/solver/_scelestial.py' 2023-07-21T09:30:03,696 adding 'trisicell/tl/solver/_sciphi.py' 2023-07-21T09:30:03,698 adding 'trisicell/tl/solver/_scistree.py' 2023-07-21T09:30:03,700 adding 'trisicell/tl/solver/_scite.py' 2023-07-21T09:30:03,701 adding 'trisicell/tl/solver/_siclonefit.py' 2023-07-21T09:30:03,703 adding 'trisicell/tl/solver/_sphyr.py' 2023-07-21T09:30:03,704 adding 'trisicell/tl/solver/booster/__init__.py' 2023-07-21T09:30:03,706 adding 'trisicell/tl/solver/booster/_booster.py' 2023-07-21T09:30:03,708 adding 'trisicell/tl/solver/booster/_dependencies.py' 2023-07-21T09:30:03,710 adding 'trisicell/tl/solver/booster/_reconstruct_big_tree.py' 2023-07-21T09:30:03,711 adding 'trisicell/tl/solver/booster/_subsamples.py' 2023-07-21T09:30:03,713 adding 'trisicell/tl/solver/huntress/__init__.py' 2023-07-21T09:30:03,716 adding 'trisicell/tl/solver/huntress/_huntress.py' 2023-07-21T09:30:03,718 adding 'trisicell/ul/__init__.py' 2023-07-21T09:30:03,719 adding 'trisicell/ul/_hclustering.py' 2023-07-21T09:30:03,721 adding 'trisicell/ul/_packages.py' 2023-07-21T09:30:03,722 adding 'trisicell/ul/_servers.py' 2023-07-21T09:30:03,724 adding 'trisicell/ul/_trees.py' 2023-07-21T09:30:03,726 adding 'trisicell/ul/_utils.py' 2023-07-21T09:30:03,728 adding 'trisicell-0.2.2.dist-info/LICENSE' 2023-07-21T09:30:03,730 adding 'trisicell-0.2.2.dist-info/METADATA' 2023-07-21T09:30:03,731 adding 'trisicell-0.2.2.dist-info/WHEEL' 2023-07-21T09:30:03,732 adding 'trisicell-0.2.2.dist-info/dependency_links.txt' 2023-07-21T09:30:03,732 adding 'trisicell-0.2.2.dist-info/entry_points.txt' 2023-07-21T09:30:03,733 adding 'trisicell-0.2.2.dist-info/top_level.txt' 2023-07-21T09:30:03,737 adding 'trisicell-0.2.2.dist-info/RECORD' 2023-07-21T09:30:04,062 removing build/bdist.linux-armv7l/wheel 2023-07-21T09:30:04,274 Building wheel for trisicell (pyproject.toml): finished with status 'done' 2023-07-21T09:30:04,933 Created wheel for trisicell: filename=trisicell-0.2.2-cp39-cp39-linux_armv7l.whl size=31011211 sha256=a65b317d66e780d86a4df87bdae60761a0c37ebb0568e261d94ac29285b8b074 2023-07-21T09:30:04,934 Stored in directory: /tmp/pip-ephem-wheel-cache-foc5fqj6/wheels/37/2e/d0/a40ce04ad8533b11031a4973b4ffc27f65cd61268e691f8673 2023-07-21T09:30:04,964 Successfully built trisicell 2023-07-21T09:30:05,665 Removed build tracker: '/tmp/pip-build-tracker-9lfm4jkx'