2023-07-22T10:58:02,527 Created temporary directory: /tmp/pip-build-tracker-d9i91h56 2023-07-22T10:58:02,528 Initialized build tracking at /tmp/pip-build-tracker-d9i91h56 2023-07-22T10:58:02,528 Created build tracker: /tmp/pip-build-tracker-d9i91h56 2023-07-22T10:58:02,528 Entered build tracker: /tmp/pip-build-tracker-d9i91h56 2023-07-22T10:58:02,529 Created temporary directory: /tmp/pip-wheel-hnuvdn1h 2023-07-22T10:58:02,532 Created temporary directory: /tmp/pip-ephem-wheel-cache-j8g42ugg 2023-07-22T10:58:02,554 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-22T10:58:02,558 2 location(s) to search for versions of chromatinhd: 2023-07-22T10:58:02,558 * https://pypi.org/simple/chromatinhd/ 2023-07-22T10:58:02,558 * https://www.piwheels.org/simple/chromatinhd/ 2023-07-22T10:58:02,558 Fetching project page and analyzing links: https://pypi.org/simple/chromatinhd/ 2023-07-22T10:58:02,559 Getting page https://pypi.org/simple/chromatinhd/ 2023-07-22T10:58:02,561 Found index url https://pypi.org/simple/ 2023-07-22T10:58:02,619 Fetched page https://pypi.org/simple/chromatinhd/ as application/vnd.pypi.simple.v1+json 2023-07-22T10:58:02,620 Found link https://files.pythonhosted.org/packages/e9/a1/9bb9f5165fc1e15e24fb4443bee4e7981f00f30916c2072b983ba315d9b5/chromatinhd-0.0.17.tar.gz (from https://pypi.org/simple/chromatinhd/) (requires-python:>=3.8), version: 0.0.17 2023-07-22T10:58:02,621 Found link https://files.pythonhosted.org/packages/72/5b/c26d6af6225afc0756a522cd3e48acc3da4303d32213719cd2c9485fc922/chromatinhd-0.0.18.tar.gz (from https://pypi.org/simple/chromatinhd/) (requires-python:>=3.8), version: 0.0.18 2023-07-22T10:58:02,621 Fetching project page and analyzing links: https://www.piwheels.org/simple/chromatinhd/ 2023-07-22T10:58:02,621 Getting page https://www.piwheels.org/simple/chromatinhd/ 2023-07-22T10:58:02,622 Found index url https://www.piwheels.org/simple/ 2023-07-22T10:58:02,803 Fetched page https://www.piwheels.org/simple/chromatinhd/ as text/html 2023-07-22T10:58:02,804 Skipping link: not a file: https://www.piwheels.org/simple/chromatinhd/ 2023-07-22T10:58:02,805 Skipping link: not a file: https://pypi.org/simple/chromatinhd/ 2023-07-22T10:58:02,822 Given no hashes to check 1 links for project 'chromatinhd': discarding no candidates 2023-07-22T10:58:02,839 Collecting chromatinhd==0.0.18 2023-07-22T10:58:02,841 Created temporary directory: /tmp/pip-unpack-gffmribi 2023-07-22T10:58:02,962 Downloading chromatinhd-0.0.18.tar.gz (6.1 MB) 2023-07-22T10:58:04,807 Added chromatinhd==0.0.18 from https://files.pythonhosted.org/packages/72/5b/c26d6af6225afc0756a522cd3e48acc3da4303d32213719cd2c9485fc922/chromatinhd-0.0.18.tar.gz to build tracker '/tmp/pip-build-tracker-d9i91h56' 2023-07-22T10:58:04,814 Created temporary directory: /tmp/pip-build-env-5k0c99ex 2023-07-22T10:58:04,824 Installing build dependencies: started 2023-07-22T10:58:04,825 Running command pip subprocess to install build dependencies 2023-07-22T10:58:05,967 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-22T10:58:06,323 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-22T10:58:08,021 Collecting setuptools>=41 2023-07-22T10:58:08,101 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-22T10:58:08,352 Collecting wheel 2023-07-22T10:58:08,370 Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB) 2023-07-22T10:58:08,689 Collecting setuptools_scm[toml]>=6.2 2023-07-22T10:58:08,705 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-07-22T10:58:09,072 Collecting packaging>=20.0 (from setuptools_scm[toml]>=6.2) 2023-07-22T10:58:09,092 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-07-22T10:58:09,217 Collecting typing-extensions (from setuptools_scm[toml]>=6.2) 2023-07-22T10:58:09,235 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.7.1-py3-none-any.whl (33 kB) 2023-07-22T10:58:09,360 Collecting tomli>=1.0.0 (from setuptools_scm[toml]>=6.2) 2023-07-22T10:58:09,378 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-07-22T10:58:11,457 Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, setuptools_scm 2023-07-22T10:58:11,671 Creating /tmp/pip-build-env-5k0c99ex/overlay/bin 2023-07-22T10:58:11,673 changing mode of /tmp/pip-build-env-5k0c99ex/overlay/bin/wheel to 755 2023-07-22T10:58:14,155 Successfully installed packaging-23.1 setuptools-68.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.7.1 wheel-0.40.0 2023-07-22T10:58:14,168 [notice] A new release of pip is available: 23.1.2 -> 23.2 2023-07-22T10:58:14,168 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-22T10:58:14,441 Installing build dependencies: finished with status 'done' 2023-07-22T10:58:14,446 Getting requirements to build wheel: started 2023-07-22T10:58:14,447 Running command Getting requirements to build wheel 2023-07-22T10:58:14,997 /tmp/pip-build-env-5k0c99ex/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-07-22T10:58:14,997 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-07-22T10:58:15,358 running egg_info 2023-07-22T10:58:15,364 writing src/chromatinhd.egg-info/PKG-INFO 2023-07-22T10:58:15,366 writing dependency_links to src/chromatinhd.egg-info/dependency_links.txt 2023-07-22T10:58:15,369 writing requirements to src/chromatinhd.egg-info/requires.txt 2023-07-22T10:58:15,370 writing top-level names to src/chromatinhd.egg-info/top_level.txt 2023-07-22T10:58:15,430 listing git files failed - pretending there aren't any 2023-07-22T10:58:15,438 reading manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:15,447 adding license file 'LICENSE.md' 2023-07-22T10:58:15,455 writing manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:15,568 Getting requirements to build wheel: finished with status 'done' 2023-07-22T10:58:15,578 Created temporary directory: /tmp/pip-modern-metadata-6gkufjpn 2023-07-22T10:58:15,581 Preparing metadata (pyproject.toml): started 2023-07-22T10:58:15,582 Running command Preparing metadata (pyproject.toml) 2023-07-22T10:58:16,098 /tmp/pip-build-env-5k0c99ex/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-07-22T10:58:16,099 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-07-22T10:58:16,451 running dist_info 2023-07-22T10:58:16,458 creating /tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info 2023-07-22T10:58:16,464 writing /tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/PKG-INFO 2023-07-22T10:58:16,466 writing dependency_links to /tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/dependency_links.txt 2023-07-22T10:58:16,468 writing requirements to /tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/requires.txt 2023-07-22T10:58:16,469 writing top-level names to /tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/top_level.txt 2023-07-22T10:58:16,470 writing manifest file '/tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:16,527 listing git files failed - pretending there aren't any 2023-07-22T10:58:16,535 reading manifest file '/tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:16,537 adding license file 'LICENSE.md' 2023-07-22T10:58:16,543 writing manifest file '/tmp/pip-modern-metadata-6gkufjpn/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:16,544 creating '/tmp/pip-modern-metadata-6gkufjpn/chromatinhd-0.0.18.dist-info' 2023-07-22T10:58:16,695 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-22T10:58:16,701 Source in /tmp/pip-wheel-hnuvdn1h/chromatinhd_01ae57dfad374eb095f0a2b5a409b4d6 has version 0.0.18, which satisfies requirement chromatinhd==0.0.18 from https://files.pythonhosted.org/packages/72/5b/c26d6af6225afc0756a522cd3e48acc3da4303d32213719cd2c9485fc922/chromatinhd-0.0.18.tar.gz 2023-07-22T10:58:16,702 Removed chromatinhd==0.0.18 from https://files.pythonhosted.org/packages/72/5b/c26d6af6225afc0756a522cd3e48acc3da4303d32213719cd2c9485fc922/chromatinhd-0.0.18.tar.gz from build tracker '/tmp/pip-build-tracker-d9i91h56' 2023-07-22T10:58:16,708 Created temporary directory: /tmp/pip-unpack-v_kr3_b9 2023-07-22T10:58:16,708 Building wheels for collected packages: chromatinhd 2023-07-22T10:58:16,712 Created temporary directory: /tmp/pip-wheel-8tg1s198 2023-07-22T10:58:16,712 Destination directory: /tmp/pip-wheel-8tg1s198 2023-07-22T10:58:16,714 Building wheel for chromatinhd (pyproject.toml): started 2023-07-22T10:58:16,715 Running command Building wheel for chromatinhd (pyproject.toml) 2023-07-22T10:58:17,226 /tmp/pip-build-env-5k0c99ex/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-07-22T10:58:17,227 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-07-22T10:58:17,557 running bdist_wheel 2023-07-22T10:58:17,578 running build 2023-07-22T10:58:17,578 running build_py 2023-07-22T10:58:17,584 creating build 2023-07-22T10:58:17,585 creating build/lib 2023-07-22T10:58:17,586 creating build/lib/chromatinhd 2023-07-22T10:58:17,587 copying src/chromatinhd/flow.py -> build/lib/chromatinhd 2023-07-22T10:58:17,589 copying src/chromatinhd/sparse.py -> build/lib/chromatinhd 2023-07-22T10:58:17,591 copying src/chromatinhd/optim.py -> build/lib/chromatinhd 2023-07-22T10:58:17,593 copying src/chromatinhd/__init__.py -> build/lib/chromatinhd 2023-07-22T10:58:17,595 copying src/chromatinhd/embedding.py -> build/lib/chromatinhd 2023-07-22T10:58:17,597 copying src/chromatinhd/peakcounts.py -> build/lib/chromatinhd 2023-07-22T10:58:17,599 copying src/chromatinhd/train.py -> build/lib/chromatinhd 2023-07-22T10:58:17,601 copying src/chromatinhd/loss.py -> build/lib/chromatinhd 2023-07-22T10:58:17,603 creating build/lib/chromatinhd/plot 2023-07-22T10:58:17,604 copying src/chromatinhd/plot/tickers.py -> build/lib/chromatinhd/plot 2023-07-22T10:58:17,606 copying src/chromatinhd/plot/__init__.py -> build/lib/chromatinhd/plot 2023-07-22T10:58:17,607 copying src/chromatinhd/plot/quasirandom.py -> build/lib/chromatinhd/plot 2023-07-22T10:58:17,609 copying src/chromatinhd/plot/patch.py -> build/lib/chromatinhd/plot 2023-07-22T10:58:17,611 copying src/chromatinhd/plot/matshow45.py -> build/lib/chromatinhd/plot 2023-07-22T10:58:17,613 creating build/lib/chromatinhd/models 2023-07-22T10:58:17,614 copying src/chromatinhd/models/__init__.py -> build/lib/chromatinhd/models 2023-07-22T10:58:17,616 creating build/lib/chromatinhd/utils 2023-07-22T10:58:17,617 copying src/chromatinhd/utils/torch.py -> build/lib/chromatinhd/utils 2023-07-22T10:58:17,619 copying src/chromatinhd/utils/numpy.py -> build/lib/chromatinhd/utils 2023-07-22T10:58:17,620 copying src/chromatinhd/utils/__init__.py -> build/lib/chromatinhd/utils 2023-07-22T10:58:17,622 copying src/chromatinhd/utils/ecdf.py -> build/lib/chromatinhd/utils 2023-07-22T10:58:17,624 copying src/chromatinhd/utils/ansi.py -> build/lib/chromatinhd/utils 2023-07-22T10:58:17,625 copying src/chromatinhd/utils/testing.py -> build/lib/chromatinhd/utils 2023-07-22T10:58:17,628 creating build/lib/chromatinhd/grid 2023-07-22T10:58:17,629 copying src/chromatinhd/grid/grid.py -> build/lib/chromatinhd/grid 2023-07-22T10:58:17,631 copying src/chromatinhd/grid/__init__.py -> build/lib/chromatinhd/grid 2023-07-22T10:58:17,633 copying src/chromatinhd/grid/broken.py -> build/lib/chromatinhd/grid 2023-07-22T10:58:17,635 creating build/lib/chromatinhd/data 2023-07-22T10:58:17,636 copying src/chromatinhd/data/__init__.py -> build/lib/chromatinhd/data 2023-07-22T10:58:17,638 copying src/chromatinhd/data/regions.py -> build/lib/chromatinhd/data 2023-07-22T10:58:17,640 creating build/lib/chromatinhd/biomart 2023-07-22T10:58:17,641 copying src/chromatinhd/biomart/cache.py -> build/lib/chromatinhd/biomart 2023-07-22T10:58:17,643 copying src/chromatinhd/biomart/dataset.py -> build/lib/chromatinhd/biomart 2023-07-22T10:58:17,645 copying src/chromatinhd/biomart/__init__.py -> build/lib/chromatinhd/biomart 2023-07-22T10:58:17,646 copying src/chromatinhd/biomart/tss.py -> build/lib/chromatinhd/biomart 2023-07-22T10:58:17,649 creating build/lib/chromatinhd/loaders 2023-07-22T10:58:17,650 copying src/chromatinhd/loaders/minibatching.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,652 copying src/chromatinhd/loaders/chunkfragments.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,654 copying src/chromatinhd/loaders/__init__.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,655 copying src/chromatinhd/loaders/fragmentmotif.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,657 copying src/chromatinhd/loaders/peakcounts.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,659 copying src/chromatinhd/loaders/fragments.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,661 copying src/chromatinhd/loaders/setup.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,663 copying src/chromatinhd/loaders/pool.py -> build/lib/chromatinhd/loaders 2023-07-22T10:58:17,665 creating build/lib/chromatinhd/plot/genome 2023-07-22T10:58:17,666 copying src/chromatinhd/plot/genome/__init__.py -> build/lib/chromatinhd/plot/genome 2023-07-22T10:58:17,668 copying src/chromatinhd/plot/genome/genes.py -> build/lib/chromatinhd/plot/genome 2023-07-22T10:58:17,671 creating build/lib/chromatinhd/models/pred 2023-07-22T10:58:17,672 copying src/chromatinhd/models/pred/__init__.py -> build/lib/chromatinhd/models/pred 2023-07-22T10:58:17,674 creating build/lib/chromatinhd/models/diff 2023-07-22T10:58:17,675 copying src/chromatinhd/models/diff/differential.py -> build/lib/chromatinhd/models/diff 2023-07-22T10:58:17,677 copying src/chromatinhd/models/diff/__init__.py -> build/lib/chromatinhd/models/diff 2023-07-22T10:58:17,680 creating build/lib/chromatinhd/models/pred/model 2023-07-22T10:58:17,681 copying src/chromatinhd/models/pred/model/additive.py -> build/lib/chromatinhd/models/pred/model 2023-07-22T10:58:17,684 copying src/chromatinhd/models/pred/model/__init__.py -> build/lib/chromatinhd/models/pred/model 2023-07-22T10:58:17,687 creating build/lib/chromatinhd/models/pred/plot 2023-07-22T10:58:17,688 copying src/chromatinhd/models/pred/plot/effect.py -> build/lib/chromatinhd/models/pred/plot 2023-07-22T10:58:17,690 copying src/chromatinhd/models/pred/plot/__init__.py -> build/lib/chromatinhd/models/pred/plot 2023-07-22T10:58:17,691 copying src/chromatinhd/models/pred/plot/predictivity.py -> build/lib/chromatinhd/models/pred/plot 2023-07-22T10:58:17,694 copying src/chromatinhd/models/pred/plot/copredictivity.py -> build/lib/chromatinhd/models/pred/plot 2023-07-22T10:58:17,696 creating build/lib/chromatinhd/models/pred/trainer 2023-07-22T10:58:17,697 copying src/chromatinhd/models/pred/trainer/trainer.py -> build/lib/chromatinhd/models/pred/trainer 2023-07-22T10:58:17,699 copying src/chromatinhd/models/pred/trainer/__init__.py -> build/lib/chromatinhd/models/pred/trainer 2023-07-22T10:58:17,701 creating build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,702 copying src/chromatinhd/models/pred/loader/transcriptome.py -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,704 copying src/chromatinhd/models/pred/loader/cuts.py -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,705 copying src/chromatinhd/models/pred/loader/transcriptome_fragments.py -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,707 copying src/chromatinhd/models/pred/loader/__init__.py -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,708 copying src/chromatinhd/models/pred/loader/minibatches.py -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,710 copying src/chromatinhd/models/pred/loader/fragments.py -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,713 creating build/lib/chromatinhd/models/pred/interpret 2023-07-22T10:58:17,714 copying src/chromatinhd/models/pred/interpret/genemultiwindow.py -> build/lib/chromatinhd/models/pred/interpret 2023-07-22T10:58:17,716 copying src/chromatinhd/models/pred/interpret/__init__.py -> build/lib/chromatinhd/models/pred/interpret 2023-07-22T10:58:17,718 copying src/chromatinhd/models/pred/interpret/genepairwindow.py -> build/lib/chromatinhd/models/pred/interpret 2023-07-22T10:58:17,720 copying src/chromatinhd/models/pred/interpret/censorers.py -> build/lib/chromatinhd/models/pred/interpret 2023-07-22T10:58:17,722 copying src/chromatinhd/models/pred/interpret/filter.py -> build/lib/chromatinhd/models/pred/interpret 2023-07-22T10:58:17,724 creating build/lib/chromatinhd/models/diff/model 2023-07-22T10:58:17,725 copying src/chromatinhd/models/diff/model/cutnf.py -> build/lib/chromatinhd/models/diff/model 2023-07-22T10:58:17,729 copying src/chromatinhd/models/diff/model/__init__.py -> build/lib/chromatinhd/models/diff/model 2023-07-22T10:58:17,731 copying src/chromatinhd/models/diff/model/spline.py -> build/lib/chromatinhd/models/diff/model 2023-07-22T10:58:17,734 creating build/lib/chromatinhd/models/diff/plot 2023-07-22T10:58:17,734 copying src/chromatinhd/models/diff/plot/differential.py -> build/lib/chromatinhd/models/diff/plot 2023-07-22T10:58:17,737 copying src/chromatinhd/models/diff/plot/__init__.py -> build/lib/chromatinhd/models/diff/plot 2023-07-22T10:58:17,739 copying src/chromatinhd/models/diff/plot/differential_expression.py -> build/lib/chromatinhd/models/diff/plot 2023-07-22T10:58:17,741 creating build/lib/chromatinhd/models/diff/trainer 2023-07-22T10:58:17,742 copying src/chromatinhd/models/diff/trainer/trainer.py -> build/lib/chromatinhd/models/diff/trainer 2023-07-22T10:58:17,744 copying src/chromatinhd/models/diff/trainer/__init__.py -> build/lib/chromatinhd/models/diff/trainer 2023-07-22T10:58:17,747 creating build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,748 copying src/chromatinhd/models/diff/loader/clustering.py -> build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,749 copying src/chromatinhd/models/diff/loader/cuts.py -> build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,752 copying src/chromatinhd/models/diff/loader/clustering_cuts.py -> build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,753 copying src/chromatinhd/models/diff/loader/__init__.py -> build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,755 copying src/chromatinhd/models/diff/loader/minibatches.py -> build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,757 creating build/lib/chromatinhd/models/diff/enrichment 2023-07-22T10:58:17,758 copying src/chromatinhd/models/diff/enrichment/enrichment.py -> build/lib/chromatinhd/models/diff/enrichment 2023-07-22T10:58:17,761 copying src/chromatinhd/models/diff/enrichment/__init__.py -> build/lib/chromatinhd/models/diff/enrichment 2023-07-22T10:58:17,764 creating build/lib/chromatinhd/models/diff/interpret 2023-07-22T10:58:17,764 copying src/chromatinhd/models/diff/interpret/genepositional.py -> build/lib/chromatinhd/models/diff/interpret 2023-07-22T10:58:17,767 copying src/chromatinhd/models/diff/interpret/__init__.py -> build/lib/chromatinhd/models/diff/interpret 2023-07-22T10:58:17,770 creating build/lib/chromatinhd/models/diff/model/splines 2023-07-22T10:58:17,771 copying src/chromatinhd/models/diff/model/splines/linear.py -> build/lib/chromatinhd/models/diff/model/splines 2023-07-22T10:58:17,773 copying src/chromatinhd/models/diff/model/splines/__init__.py -> build/lib/chromatinhd/models/diff/model/splines 2023-07-22T10:58:17,775 copying src/chromatinhd/models/diff/model/splines/cubic.py -> build/lib/chromatinhd/models/diff/model/splines 2023-07-22T10:58:17,777 copying src/chromatinhd/models/diff/model/splines/quadratic.py -> build/lib/chromatinhd/models/diff/model/splines 2023-07-22T10:58:17,781 creating build/lib/chromatinhd/data/clustering 2023-07-22T10:58:17,782 copying src/chromatinhd/data/clustering/clustering.py -> build/lib/chromatinhd/data/clustering 2023-07-22T10:58:17,783 copying src/chromatinhd/data/clustering/__init__.py -> build/lib/chromatinhd/data/clustering 2023-07-22T10:58:17,786 creating build/lib/chromatinhd/data/genotype 2023-07-22T10:58:17,787 copying src/chromatinhd/data/genotype/__init__.py -> build/lib/chromatinhd/data/genotype 2023-07-22T10:58:17,788 copying src/chromatinhd/data/genotype/genotype.py -> build/lib/chromatinhd/data/genotype 2023-07-22T10:58:17,790 creating build/lib/chromatinhd/data/transcriptome 2023-07-22T10:58:17,791 copying src/chromatinhd/data/transcriptome/transcriptome.py -> build/lib/chromatinhd/data/transcriptome 2023-07-22T10:58:17,794 copying src/chromatinhd/data/transcriptome/__init__.py -> build/lib/chromatinhd/data/transcriptome 2023-07-22T10:58:17,796 creating build/lib/chromatinhd/data/folds 2023-07-22T10:58:17,797 copying src/chromatinhd/data/folds/folds.py -> build/lib/chromatinhd/data/folds 2023-07-22T10:58:17,799 copying src/chromatinhd/data/folds/__init__.py -> build/lib/chromatinhd/data/folds 2023-07-22T10:58:17,801 creating build/lib/chromatinhd/data/fragments 2023-07-22T10:58:17,802 copying src/chromatinhd/data/fragments/__init__.py -> build/lib/chromatinhd/data/fragments 2023-07-22T10:58:17,803 copying src/chromatinhd/data/fragments/fragments.py -> build/lib/chromatinhd/data/fragments 2023-07-22T10:58:17,806 creating build/lib/chromatinhd/data/motifscan 2023-07-22T10:58:17,807 copying src/chromatinhd/data/motifscan/motiftrack.py -> build/lib/chromatinhd/data/motifscan 2023-07-22T10:58:17,809 copying src/chromatinhd/data/motifscan/motifscan.py -> build/lib/chromatinhd/data/motifscan 2023-07-22T10:58:17,811 copying src/chromatinhd/data/motifscan/__init__.py -> build/lib/chromatinhd/data/motifscan 2023-07-22T10:58:17,814 running egg_info 2023-07-22T10:58:17,825 writing src/chromatinhd.egg-info/PKG-INFO 2023-07-22T10:58:17,826 writing dependency_links to src/chromatinhd.egg-info/dependency_links.txt 2023-07-22T10:58:17,828 writing requirements to src/chromatinhd.egg-info/requires.txt 2023-07-22T10:58:17,829 writing top-level names to src/chromatinhd.egg-info/top_level.txt 2023-07-22T10:58:17,875 listing git files failed - pretending there aren't any 2023-07-22T10:58:17,882 reading manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:17,887 adding license file 'LICENSE.md' 2023-07-22T10:58:17,896 writing manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-07-22T10:58:17,905 copying src/chromatinhd/models/pred/loader/fragments_helpers.pyx -> build/lib/chromatinhd/models/pred/loader 2023-07-22T10:58:17,907 copying src/chromatinhd/models/diff/loader/fragments_helpers.pyx -> build/lib/chromatinhd/models/diff/loader 2023-07-22T10:58:17,908 creating build/lib/chromatinhd/data/examples 2023-07-22T10:58:17,909 creating build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:17,910 copying src/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz -> build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:17,956 copying src/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz.tbi -> build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:17,958 copying src/chromatinhd/data/examples/pbmc10ktiny/transcriptome.h5ad -> build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:17,998 creating build/lib/chromatinhd/loaders/extraction 2023-07-22T10:58:17,999 copying src/chromatinhd/loaders/extraction/fragments.pyx -> build/lib/chromatinhd/loaders/extraction 2023-07-22T10:58:18,001 copying src/chromatinhd/loaders/extraction/motifs.pyx -> build/lib/chromatinhd/loaders/extraction 2023-07-22T10:58:18,032 installing to build/bdist.linux-armv7l/wheel 2023-07-22T10:58:18,032 running install 2023-07-22T10:58:18,058 running install_lib 2023-07-22T10:58:18,064 creating build/bdist.linux-armv7l 2023-07-22T10:58:18,065 creating build/bdist.linux-armv7l/wheel 2023-07-22T10:58:18,066 creating build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,067 copying build/lib/chromatinhd/flow.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,070 creating build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-07-22T10:58:18,071 copying build/lib/chromatinhd/plot/tickers.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-07-22T10:58:18,073 creating build/bdist.linux-armv7l/wheel/chromatinhd/plot/genome 2023-07-22T10:58:18,074 copying build/lib/chromatinhd/plot/genome/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot/genome 2023-07-22T10:58:18,076 copying build/lib/chromatinhd/plot/genome/genes.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot/genome 2023-07-22T10:58:18,078 copying build/lib/chromatinhd/plot/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-07-22T10:58:18,080 copying build/lib/chromatinhd/plot/quasirandom.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-07-22T10:58:18,081 copying build/lib/chromatinhd/plot/patch.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-07-22T10:58:18,083 copying build/lib/chromatinhd/plot/matshow45.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-07-22T10:58:18,085 creating build/bdist.linux-armv7l/wheel/chromatinhd/models 2023-07-22T10:58:18,086 copying build/lib/chromatinhd/models/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models 2023-07-22T10:58:18,088 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred 2023-07-22T10:58:18,089 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-07-22T10:58:18,090 copying build/lib/chromatinhd/models/pred/model/additive.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-07-22T10:58:18,093 copying build/lib/chromatinhd/models/pred/model/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-07-22T10:58:18,095 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-07-22T10:58:18,095 copying build/lib/chromatinhd/models/pred/plot/effect.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-07-22T10:58:18,097 copying build/lib/chromatinhd/models/pred/plot/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-07-22T10:58:18,099 copying build/lib/chromatinhd/models/pred/plot/predictivity.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-07-22T10:58:18,101 copying build/lib/chromatinhd/models/pred/plot/copredictivity.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-07-22T10:58:18,103 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/trainer 2023-07-22T10:58:18,104 copying build/lib/chromatinhd/models/pred/trainer/trainer.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/trainer 2023-07-22T10:58:18,106 copying build/lib/chromatinhd/models/pred/trainer/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/trainer 2023-07-22T10:58:18,108 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,109 copying build/lib/chromatinhd/models/pred/loader/transcriptome.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,111 copying build/lib/chromatinhd/models/pred/loader/cuts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,112 copying build/lib/chromatinhd/models/pred/loader/transcriptome_fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,113 copying build/lib/chromatinhd/models/pred/loader/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,115 copying build/lib/chromatinhd/models/pred/loader/fragments_helpers.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,117 copying build/lib/chromatinhd/models/pred/loader/minibatches.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,119 copying build/lib/chromatinhd/models/pred/loader/fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-07-22T10:58:18,121 copying build/lib/chromatinhd/models/pred/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred 2023-07-22T10:58:18,123 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-07-22T10:58:18,124 copying build/lib/chromatinhd/models/pred/interpret/genemultiwindow.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-07-22T10:58:18,126 copying build/lib/chromatinhd/models/pred/interpret/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-07-22T10:58:18,128 copying build/lib/chromatinhd/models/pred/interpret/genepairwindow.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-07-22T10:58:18,130 copying build/lib/chromatinhd/models/pred/interpret/censorers.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-07-22T10:58:18,132 copying build/lib/chromatinhd/models/pred/interpret/filter.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-07-22T10:58:18,134 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff 2023-07-22T10:58:18,135 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-07-22T10:58:18,136 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-07-22T10:58:18,137 copying build/lib/chromatinhd/models/diff/model/splines/linear.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-07-22T10:58:18,139 copying build/lib/chromatinhd/models/diff/model/splines/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-07-22T10:58:18,141 copying build/lib/chromatinhd/models/diff/model/splines/cubic.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-07-22T10:58:18,143 copying build/lib/chromatinhd/models/diff/model/splines/quadratic.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-07-22T10:58:18,145 copying build/lib/chromatinhd/models/diff/model/cutnf.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-07-22T10:58:18,147 copying build/lib/chromatinhd/models/diff/model/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-07-22T10:58:18,148 copying build/lib/chromatinhd/models/diff/model/spline.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-07-22T10:58:18,151 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-07-22T10:58:18,152 copying build/lib/chromatinhd/models/diff/plot/differential.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-07-22T10:58:18,154 copying build/lib/chromatinhd/models/diff/plot/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-07-22T10:58:18,156 copying build/lib/chromatinhd/models/diff/plot/differential_expression.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-07-22T10:58:18,158 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/trainer 2023-07-22T10:58:18,159 copying build/lib/chromatinhd/models/diff/trainer/trainer.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/trainer 2023-07-22T10:58:18,161 copying build/lib/chromatinhd/models/diff/trainer/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/trainer 2023-07-22T10:58:18,163 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,163 copying build/lib/chromatinhd/models/diff/loader/clustering.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,165 copying build/lib/chromatinhd/models/diff/loader/cuts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,167 copying build/lib/chromatinhd/models/diff/loader/clustering_cuts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,169 copying build/lib/chromatinhd/models/diff/loader/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,170 copying build/lib/chromatinhd/models/diff/loader/fragments_helpers.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,172 copying build/lib/chromatinhd/models/diff/loader/minibatches.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-07-22T10:58:18,174 copying build/lib/chromatinhd/models/diff/differential.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff 2023-07-22T10:58:18,176 copying build/lib/chromatinhd/models/diff/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff 2023-07-22T10:58:18,178 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/enrichment 2023-07-22T10:58:18,179 copying build/lib/chromatinhd/models/diff/enrichment/enrichment.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/enrichment 2023-07-22T10:58:18,181 copying build/lib/chromatinhd/models/diff/enrichment/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/enrichment 2023-07-22T10:58:18,183 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/interpret 2023-07-22T10:58:18,184 copying build/lib/chromatinhd/models/diff/interpret/genepositional.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/interpret 2023-07-22T10:58:18,187 copying build/lib/chromatinhd/models/diff/interpret/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/interpret 2023-07-22T10:58:18,188 copying build/lib/chromatinhd/sparse.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,190 creating build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,191 copying build/lib/chromatinhd/utils/torch.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,193 copying build/lib/chromatinhd/utils/numpy.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,194 copying build/lib/chromatinhd/utils/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,196 copying build/lib/chromatinhd/utils/ecdf.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,198 copying build/lib/chromatinhd/utils/ansi.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,199 copying build/lib/chromatinhd/utils/testing.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-07-22T10:58:18,202 creating build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-07-22T10:58:18,202 copying build/lib/chromatinhd/grid/grid.py -> build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-07-22T10:58:18,205 copying build/lib/chromatinhd/grid/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-07-22T10:58:18,206 copying build/lib/chromatinhd/grid/broken.py -> build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-07-22T10:58:18,208 creating build/bdist.linux-armv7l/wheel/chromatinhd/data 2023-07-22T10:58:18,209 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/examples 2023-07-22T10:58:18,211 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:18,211 copying build/lib/chromatinhd/data/examples/pbmc10ktiny/transcriptome.h5ad -> build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:18,263 copying build/lib/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz.tbi -> build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:18,266 copying build/lib/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz -> build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-07-22T10:58:18,301 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/clustering 2023-07-22T10:58:18,302 copying build/lib/chromatinhd/data/clustering/clustering.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/clustering 2023-07-22T10:58:18,304 copying build/lib/chromatinhd/data/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/clustering 2023-07-22T10:58:18,306 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/genotype 2023-07-22T10:58:18,306 copying build/lib/chromatinhd/data/genotype/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/genotype 2023-07-22T10:58:18,308 copying build/lib/chromatinhd/data/genotype/genotype.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/genotype 2023-07-22T10:58:18,310 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/transcriptome 2023-07-22T10:58:18,311 copying build/lib/chromatinhd/data/transcriptome/transcriptome.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/transcriptome 2023-07-22T10:58:18,313 copying build/lib/chromatinhd/data/transcriptome/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/transcriptome 2023-07-22T10:58:18,315 copying build/lib/chromatinhd/data/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data 2023-07-22T10:58:18,317 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/folds 2023-07-22T10:58:18,318 copying build/lib/chromatinhd/data/folds/folds.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/folds 2023-07-22T10:58:18,320 copying build/lib/chromatinhd/data/folds/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/folds 2023-07-22T10:58:18,322 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/fragments 2023-07-22T10:58:18,323 copying build/lib/chromatinhd/data/fragments/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/fragments 2023-07-22T10:58:18,325 copying build/lib/chromatinhd/data/fragments/fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/fragments 2023-07-22T10:58:18,327 copying build/lib/chromatinhd/data/regions.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data 2023-07-22T10:58:18,329 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-07-22T10:58:18,330 copying build/lib/chromatinhd/data/motifscan/motiftrack.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-07-22T10:58:18,332 copying build/lib/chromatinhd/data/motifscan/motifscan.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-07-22T10:58:18,333 copying build/lib/chromatinhd/data/motifscan/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-07-22T10:58:18,335 copying build/lib/chromatinhd/optim.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,337 copying build/lib/chromatinhd/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,339 creating build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-07-22T10:58:18,340 copying build/lib/chromatinhd/biomart/cache.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-07-22T10:58:18,341 copying build/lib/chromatinhd/biomart/dataset.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-07-22T10:58:18,343 copying build/lib/chromatinhd/biomart/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-07-22T10:58:18,345 copying build/lib/chromatinhd/biomart/tss.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-07-22T10:58:18,347 copying build/lib/chromatinhd/embedding.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,348 copying build/lib/chromatinhd/peakcounts.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,350 copying build/lib/chromatinhd/train.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,353 creating build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,354 creating build/bdist.linux-armv7l/wheel/chromatinhd/loaders/extraction 2023-07-22T10:58:18,355 copying build/lib/chromatinhd/loaders/extraction/motifs.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders/extraction 2023-07-22T10:58:18,358 copying build/lib/chromatinhd/loaders/extraction/fragments.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders/extraction 2023-07-22T10:58:18,360 copying build/lib/chromatinhd/loaders/minibatching.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,361 copying build/lib/chromatinhd/loaders/chunkfragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,363 copying build/lib/chromatinhd/loaders/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,365 copying build/lib/chromatinhd/loaders/fragmentmotif.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,367 copying build/lib/chromatinhd/loaders/peakcounts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,369 copying build/lib/chromatinhd/loaders/fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,371 copying build/lib/chromatinhd/loaders/setup.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,373 copying build/lib/chromatinhd/loaders/pool.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-07-22T10:58:18,375 copying build/lib/chromatinhd/loss.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-07-22T10:58:18,376 running install_egg_info 2023-07-22T10:58:18,382 Copying src/chromatinhd.egg-info to build/bdist.linux-armv7l/wheel/chromatinhd-0.0.18-py3.9.egg-info 2023-07-22T10:58:18,391 running install_scripts 2023-07-22T10:58:18,409 creating build/bdist.linux-armv7l/wheel/chromatinhd-0.0.18.dist-info/WHEEL 2023-07-22T10:58:18,413 creating '/tmp/pip-wheel-8tg1s198/.tmp-d35kpydp/chromatinhd-0.0.18-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-22T10:58:18,415 adding 'chromatinhd/__init__.py' 2023-07-22T10:58:18,417 adding 'chromatinhd/embedding.py' 2023-07-22T10:58:18,419 adding 'chromatinhd/flow.py' 2023-07-22T10:58:18,420 adding 'chromatinhd/loss.py' 2023-07-22T10:58:18,421 adding 'chromatinhd/optim.py' 2023-07-22T10:58:18,423 adding 'chromatinhd/peakcounts.py' 2023-07-22T10:58:18,424 adding 'chromatinhd/sparse.py' 2023-07-22T10:58:18,426 adding 'chromatinhd/train.py' 2023-07-22T10:58:18,427 adding 'chromatinhd/biomart/__init__.py' 2023-07-22T10:58:18,429 adding 'chromatinhd/biomart/cache.py' 2023-07-22T10:58:18,430 adding 'chromatinhd/biomart/dataset.py' 2023-07-22T10:58:18,431 adding 'chromatinhd/biomart/tss.py' 2023-07-22T10:58:18,433 adding 'chromatinhd/data/__init__.py' 2023-07-22T10:58:18,434 adding 'chromatinhd/data/regions.py' 2023-07-22T10:58:18,436 adding 'chromatinhd/data/clustering/__init__.py' 2023-07-22T10:58:18,437 adding 'chromatinhd/data/clustering/clustering.py' 2023-07-22T10:58:18,666 adding 'chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz' 2023-07-22T10:58:18,680 adding 'chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz.tbi' 2023-07-22T10:58:18,989 adding 'chromatinhd/data/examples/pbmc10ktiny/transcriptome.h5ad' 2023-07-22T10:58:19,007 adding 'chromatinhd/data/folds/__init__.py' 2023-07-22T10:58:19,008 adding 'chromatinhd/data/folds/folds.py' 2023-07-22T10:58:19,010 adding 'chromatinhd/data/fragments/__init__.py' 2023-07-22T10:58:19,011 adding 'chromatinhd/data/fragments/fragments.py' 2023-07-22T10:58:19,013 adding 'chromatinhd/data/genotype/__init__.py' 2023-07-22T10:58:19,014 adding 'chromatinhd/data/genotype/genotype.py' 2023-07-22T10:58:19,016 adding 'chromatinhd/data/motifscan/__init__.py' 2023-07-22T10:58:19,017 adding 'chromatinhd/data/motifscan/motifscan.py' 2023-07-22T10:58:19,018 adding 'chromatinhd/data/motifscan/motiftrack.py' 2023-07-22T10:58:19,020 adding 'chromatinhd/data/transcriptome/__init__.py' 2023-07-22T10:58:19,021 adding 'chromatinhd/data/transcriptome/transcriptome.py' 2023-07-22T10:58:19,023 adding 'chromatinhd/grid/__init__.py' 2023-07-22T10:58:19,024 adding 'chromatinhd/grid/broken.py' 2023-07-22T10:58:19,026 adding 'chromatinhd/grid/grid.py' 2023-07-22T10:58:19,028 adding 'chromatinhd/loaders/__init__.py' 2023-07-22T10:58:19,029 adding 'chromatinhd/loaders/chunkfragments.py' 2023-07-22T10:58:19,031 adding 'chromatinhd/loaders/fragmentmotif.py' 2023-07-22T10:58:19,032 adding 'chromatinhd/loaders/fragments.py' 2023-07-22T10:58:19,034 adding 'chromatinhd/loaders/minibatching.py' 2023-07-22T10:58:19,035 adding 'chromatinhd/loaders/peakcounts.py' 2023-07-22T10:58:19,037 adding 'chromatinhd/loaders/pool.py' 2023-07-22T10:58:19,038 adding 'chromatinhd/loaders/setup.py' 2023-07-22T10:58:19,040 adding 'chromatinhd/loaders/extraction/fragments.pyx' 2023-07-22T10:58:19,041 adding 'chromatinhd/loaders/extraction/motifs.pyx' 2023-07-22T10:58:19,043 adding 'chromatinhd/models/__init__.py' 2023-07-22T10:58:19,045 adding 'chromatinhd/models/diff/__init__.py' 2023-07-22T10:58:19,047 adding 'chromatinhd/models/diff/differential.py' 2023-07-22T10:58:19,049 adding 'chromatinhd/models/diff/enrichment/__init__.py' 2023-07-22T10:58:19,051 adding 'chromatinhd/models/diff/enrichment/enrichment.py' 2023-07-22T10:58:19,053 adding 'chromatinhd/models/diff/interpret/__init__.py' 2023-07-22T10:58:19,054 adding 'chromatinhd/models/diff/interpret/genepositional.py' 2023-07-22T10:58:19,056 adding 'chromatinhd/models/diff/loader/__init__.py' 2023-07-22T10:58:19,057 adding 'chromatinhd/models/diff/loader/clustering.py' 2023-07-22T10:58:19,058 adding 'chromatinhd/models/diff/loader/clustering_cuts.py' 2023-07-22T10:58:19,060 adding 'chromatinhd/models/diff/loader/cuts.py' 2023-07-22T10:58:19,061 adding 'chromatinhd/models/diff/loader/fragments_helpers.pyx' 2023-07-22T10:58:19,062 adding 'chromatinhd/models/diff/loader/minibatches.py' 2023-07-22T10:58:19,064 adding 'chromatinhd/models/diff/model/__init__.py' 2023-07-22T10:58:19,067 adding 'chromatinhd/models/diff/model/cutnf.py' 2023-07-22T10:58:19,069 adding 'chromatinhd/models/diff/model/spline.py' 2023-07-22T10:58:19,070 adding 'chromatinhd/models/diff/model/splines/__init__.py' 2023-07-22T10:58:19,072 adding 'chromatinhd/models/diff/model/splines/cubic.py' 2023-07-22T10:58:19,074 adding 'chromatinhd/models/diff/model/splines/linear.py' 2023-07-22T10:58:19,075 adding 'chromatinhd/models/diff/model/splines/quadratic.py' 2023-07-22T10:58:19,078 adding 'chromatinhd/models/diff/plot/__init__.py' 2023-07-22T10:58:19,079 adding 'chromatinhd/models/diff/plot/differential.py' 2023-07-22T10:58:19,081 adding 'chromatinhd/models/diff/plot/differential_expression.py' 2023-07-22T10:58:19,082 adding 'chromatinhd/models/diff/trainer/__init__.py' 2023-07-22T10:58:19,084 adding 'chromatinhd/models/diff/trainer/trainer.py' 2023-07-22T10:58:19,085 adding 'chromatinhd/models/pred/__init__.py' 2023-07-22T10:58:19,087 adding 'chromatinhd/models/pred/interpret/__init__.py' 2023-07-22T10:58:19,088 adding 'chromatinhd/models/pred/interpret/censorers.py' 2023-07-22T10:58:19,089 adding 'chromatinhd/models/pred/interpret/filter.py' 2023-07-22T10:58:19,091 adding 'chromatinhd/models/pred/interpret/genemultiwindow.py' 2023-07-22T10:58:19,093 adding 'chromatinhd/models/pred/interpret/genepairwindow.py' 2023-07-22T10:58:19,095 adding 'chromatinhd/models/pred/loader/__init__.py' 2023-07-22T10:58:19,096 adding 'chromatinhd/models/pred/loader/cuts.py' 2023-07-22T10:58:19,097 adding 'chromatinhd/models/pred/loader/fragments.py' 2023-07-22T10:58:19,098 adding 'chromatinhd/models/pred/loader/fragments_helpers.pyx' 2023-07-22T10:58:19,100 adding 'chromatinhd/models/pred/loader/minibatches.py' 2023-07-22T10:58:19,101 adding 'chromatinhd/models/pred/loader/transcriptome.py' 2023-07-22T10:58:19,102 adding 'chromatinhd/models/pred/loader/transcriptome_fragments.py' 2023-07-22T10:58:19,104 adding 'chromatinhd/models/pred/model/__init__.py' 2023-07-22T10:58:19,107 adding 'chromatinhd/models/pred/model/additive.py' 2023-07-22T10:58:19,108 adding 'chromatinhd/models/pred/plot/__init__.py' 2023-07-22T10:58:19,110 adding 'chromatinhd/models/pred/plot/copredictivity.py' 2023-07-22T10:58:19,111 adding 'chromatinhd/models/pred/plot/effect.py' 2023-07-22T10:58:19,112 adding 'chromatinhd/models/pred/plot/predictivity.py' 2023-07-22T10:58:19,114 adding 'chromatinhd/models/pred/trainer/__init__.py' 2023-07-22T10:58:19,115 adding 'chromatinhd/models/pred/trainer/trainer.py' 2023-07-22T10:58:19,117 adding 'chromatinhd/plot/__init__.py' 2023-07-22T10:58:19,118 adding 'chromatinhd/plot/matshow45.py' 2023-07-22T10:58:19,120 adding 'chromatinhd/plot/patch.py' 2023-07-22T10:58:19,121 adding 'chromatinhd/plot/quasirandom.py' 2023-07-22T10:58:19,122 adding 'chromatinhd/plot/tickers.py' 2023-07-22T10:58:19,124 adding 'chromatinhd/plot/genome/__init__.py' 2023-07-22T10:58:19,126 adding 'chromatinhd/plot/genome/genes.py' 2023-07-22T10:58:19,128 adding 'chromatinhd/utils/__init__.py' 2023-07-22T10:58:19,129 adding 'chromatinhd/utils/ansi.py' 2023-07-22T10:58:19,130 adding 'chromatinhd/utils/ecdf.py' 2023-07-22T10:58:19,131 adding 'chromatinhd/utils/numpy.py' 2023-07-22T10:58:19,133 adding 'chromatinhd/utils/testing.py' 2023-07-22T10:58:19,134 adding 'chromatinhd/utils/torch.py' 2023-07-22T10:58:19,136 adding 'chromatinhd-0.0.18.dist-info/LICENSE.md' 2023-07-22T10:58:19,137 adding 'chromatinhd-0.0.18.dist-info/METADATA' 2023-07-22T10:58:19,138 adding 'chromatinhd-0.0.18.dist-info/WHEEL' 2023-07-22T10:58:19,139 adding 'chromatinhd-0.0.18.dist-info/top_level.txt' 2023-07-22T10:58:19,141 adding 'chromatinhd-0.0.18.dist-info/RECORD' 2023-07-22T10:58:19,186 removing build/bdist.linux-armv7l/wheel 2023-07-22T10:58:19,333 Building wheel for chromatinhd (pyproject.toml): finished with status 'done' 2023-07-22T10:58:19,430 Created wheel for chromatinhd: filename=chromatinhd-0.0.18-py3-none-any.whl size=4317152 sha256=23573599a830a53768757dc7623bc567b3b557ce172d3aa9600f406e72fee5a3 2023-07-22T10:58:19,431 Stored in directory: /tmp/pip-ephem-wheel-cache-j8g42ugg/wheels/5b/95/ff/c0910b175a68a8fa3a9a62f1548fc444dada6fe36b1cf71982 2023-07-22T10:58:19,447 Successfully built chromatinhd 2023-07-22T10:58:19,546 Removed build tracker: '/tmp/pip-build-tracker-d9i91h56'