2023-07-23T05:59:28,816 Created temporary directory: /tmp/pip-build-tracker-hremrusk 2023-07-23T05:59:28,817 Initialized build tracking at /tmp/pip-build-tracker-hremrusk 2023-07-23T05:59:28,818 Created build tracker: /tmp/pip-build-tracker-hremrusk 2023-07-23T05:59:28,818 Entered build tracker: /tmp/pip-build-tracker-hremrusk 2023-07-23T05:59:28,818 Created temporary directory: /tmp/pip-wheel-4tt3nn51 2023-07-23T05:59:28,821 Created temporary directory: /tmp/pip-ephem-wheel-cache-3yqz3mgd 2023-07-23T05:59:28,844 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-23T05:59:28,848 2 location(s) to search for versions of phynetpy: 2023-07-23T05:59:28,848 * https://pypi.org/simple/phynetpy/ 2023-07-23T05:59:28,848 * https://www.piwheels.org/simple/phynetpy/ 2023-07-23T05:59:28,848 Fetching project page and analyzing links: https://pypi.org/simple/phynetpy/ 2023-07-23T05:59:28,849 Getting page https://pypi.org/simple/phynetpy/ 2023-07-23T05:59:28,850 Found index url https://pypi.org/simple/ 2023-07-23T05:59:28,900 Fetched page https://pypi.org/simple/phynetpy/ as application/vnd.pypi.simple.v1+json 2023-07-23T05:59:28,901 Skipping link: No binaries permitted for phynetpy: https://files.pythonhosted.org/packages/ca/09/330fee700fddd31c7a667cc70c35300e3a4771a3eada01cfd210cffff202/PhyNetPy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-23T05:59:28,902 Found link https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.3 2023-07-23T05:59:28,902 Found link https://files.pythonhosted.org/packages/12/5a/4771d05caf1f35a2bed8a225f0d0e5451d92ca18b69b5f38840265b5fd66/PhyNetPy-0.0.7.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.7 2023-07-23T05:59:28,903 Found link https://files.pythonhosted.org/packages/ee/ed/e36b0cbe28e5be4ff209d3761fc9285e484f500538e89d8ef762cdd52f40/PhyNetPy-0.0.8.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.8 2023-07-23T05:59:28,903 Fetching project page and analyzing links: https://www.piwheels.org/simple/phynetpy/ 2023-07-23T05:59:28,904 Getting page https://www.piwheels.org/simple/phynetpy/ 2023-07-23T05:59:28,905 Found index url https://www.piwheels.org/simple/ 2023-07-23T05:59:29,063 Fetched page https://www.piwheels.org/simple/phynetpy/ as text/html 2023-07-23T05:59:29,065 Skipping link: No binaries permitted for phynetpy: https://www.piwheels.org/simple/phynetpy/PhyNetPy-0.1.0-py3-none-any.whl#sha256=6e28656e552521e811ba9c1c9a7fe9b88ec882d9c1bfb898ea789ca8e45c98c7 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-23T05:59:29,066 Skipping link: No binaries permitted for phynetpy: https://www.piwheels.org/simple/phynetpy/PhyNetPy-0.0.7-py3-none-any.whl#sha256=9b8c80272af518d16582a09c6dbf183f3c50c7bda7481812461144ccbfdb6702 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-23T05:59:29,066 Skipping link: No binaries permitted for phynetpy: https://www.piwheels.org/simple/phynetpy/PhyNetPy-0.0.3-py3-none-any.whl#sha256=daaf000f384f301addcda39f19569d5dab0097cdd8603085af86618ab61ab0a2 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2023-07-23T05:59:29,066 Skipping link: not a file: https://www.piwheels.org/simple/phynetpy/ 2023-07-23T05:59:29,066 Skipping link: not a file: https://pypi.org/simple/phynetpy/ 2023-07-23T05:59:29,084 Given no hashes to check 1 links for project 'phynetpy': discarding no candidates 2023-07-23T05:59:29,101 Collecting phynetpy==0.0.8 2023-07-23T05:59:29,103 Created temporary directory: /tmp/pip-unpack-itbk2ru9 2023-07-23T05:59:29,223 Downloading PhyNetPy-0.0.8.tar.gz (73 kB) 2023-07-23T05:59:29,324 Added phynetpy==0.0.8 from https://files.pythonhosted.org/packages/ee/ed/e36b0cbe28e5be4ff209d3761fc9285e484f500538e89d8ef762cdd52f40/PhyNetPy-0.0.8.tar.gz to build tracker '/tmp/pip-build-tracker-hremrusk' 2023-07-23T05:59:29,328 Created temporary directory: /tmp/pip-build-env-ni8qujdt 2023-07-23T05:59:29,338 Installing build dependencies: started 2023-07-23T05:59:29,340 Running command pip subprocess to install build dependencies 2023-07-23T05:59:30,542 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-23T05:59:30,898 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-23T05:59:32,529 Collecting setuptools>=61.0.0 2023-07-23T05:59:32,605 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-23T05:59:32,864 Collecting wheel 2023-07-23T05:59:32,883 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.0-py3-none-any.whl (64 kB) 2023-07-23T05:59:34,665 Installing collected packages: wheel, setuptools 2023-07-23T05:59:34,896 Creating /tmp/pip-build-env-ni8qujdt/overlay/bin 2023-07-23T05:59:34,898 changing mode of /tmp/pip-build-env-ni8qujdt/overlay/bin/wheel to 755 2023-07-23T05:59:37,042 Successfully installed setuptools-68.0.0 wheel-0.41.0 2023-07-23T05:59:37,055 [notice] A new release of pip is available: 23.1.2 -> 23.2 2023-07-23T05:59:37,055 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-23T05:59:37,306 Installing build dependencies: finished with status 'done' 2023-07-23T05:59:37,311 Getting requirements to build wheel: started 2023-07-23T05:59:37,312 Running command Getting requirements to build wheel 2023-07-23T05:59:37,924 running egg_info 2023-07-23T05:59:37,928 writing src/PhyNetPy.egg-info/PKG-INFO 2023-07-23T05:59:37,931 writing dependency_links to src/PhyNetPy.egg-info/dependency_links.txt 2023-07-23T05:59:37,933 writing requirements to src/PhyNetPy.egg-info/requires.txt 2023-07-23T05:59:37,934 writing top-level names to src/PhyNetPy.egg-info/top_level.txt 2023-07-23T05:59:37,953 reading manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:37,956 adding license file 'LICENSE' 2023-07-23T05:59:37,959 writing manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:38,020 Getting requirements to build wheel: finished with status 'done' 2023-07-23T05:59:38,029 Created temporary directory: /tmp/pip-modern-metadata-a9tgt2we 2023-07-23T05:59:38,031 Preparing metadata (pyproject.toml): started 2023-07-23T05:59:38,032 Running command Preparing metadata (pyproject.toml) 2023-07-23T05:59:38,560 running dist_info 2023-07-23T05:59:38,577 creating /tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info 2023-07-23T05:59:38,581 writing /tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/PKG-INFO 2023-07-23T05:59:38,583 writing dependency_links to /tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/dependency_links.txt 2023-07-23T05:59:38,585 writing requirements to /tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/requires.txt 2023-07-23T05:59:38,586 writing top-level names to /tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/top_level.txt 2023-07-23T05:59:38,588 writing manifest file '/tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:38,607 reading manifest file '/tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:38,609 adding license file 'LICENSE' 2023-07-23T05:59:38,612 writing manifest file '/tmp/pip-modern-metadata-a9tgt2we/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:38,613 creating '/tmp/pip-modern-metadata-a9tgt2we/PhyNetPy-0.0.8.dist-info' 2023-07-23T05:59:38,774 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-23T05:59:38,780 Source in /tmp/pip-wheel-4tt3nn51/phynetpy_477c8754101c4fa79d5c556e58b1c31f has version 0.0.8, which satisfies requirement phynetpy==0.0.8 from https://files.pythonhosted.org/packages/ee/ed/e36b0cbe28e5be4ff209d3761fc9285e484f500538e89d8ef762cdd52f40/PhyNetPy-0.0.8.tar.gz 2023-07-23T05:59:38,781 Removed phynetpy==0.0.8 from https://files.pythonhosted.org/packages/ee/ed/e36b0cbe28e5be4ff209d3761fc9285e484f500538e89d8ef762cdd52f40/PhyNetPy-0.0.8.tar.gz from build tracker '/tmp/pip-build-tracker-hremrusk' 2023-07-23T05:59:38,787 Created temporary directory: /tmp/pip-unpack-66mr7cml 2023-07-23T05:59:38,788 Building wheels for collected packages: phynetpy 2023-07-23T05:59:38,792 Created temporary directory: /tmp/pip-wheel-r7tkts4q 2023-07-23T05:59:38,792 Destination directory: /tmp/pip-wheel-r7tkts4q 2023-07-23T05:59:38,794 Building wheel for phynetpy (pyproject.toml): started 2023-07-23T05:59:38,795 Running command Building wheel for phynetpy (pyproject.toml) 2023-07-23T05:59:39,362 running bdist_wheel 2023-07-23T05:59:39,394 running build 2023-07-23T05:59:39,394 running build_py 2023-07-23T05:59:39,402 creating build 2023-07-23T05:59:39,403 creating build/lib 2023-07-23T05:59:39,403 creating build/lib/PhyNetPy 2023-07-23T05:59:39,404 copying src/PhyNetPy/GeneTrees.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,407 copying src/PhyNetPy/Graph.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,410 copying src/PhyNetPy/BirthDeath.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,412 copying src/PhyNetPy/Matrix.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,414 copying src/PhyNetPy/PhySNP.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,417 copying src/PhyNetPy/MPSugar.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,420 copying src/PhyNetPy/MetropolisHastings.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,422 copying src/PhyNetPy/GTR2.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,424 copying src/PhyNetPy/NetworkParser.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,426 copying src/PhyNetPy/ModelGraph.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,429 copying src/PhyNetPy/Alphabet.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,431 copying src/PhyNetPy/SequenceSim.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,433 copying src/PhyNetPy/State.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,434 copying src/PhyNetPy/MSA.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,436 copying src/PhyNetPy/__init__.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,438 copying src/PhyNetPy/Node.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,440 copying src/PhyNetPy/ModelFactory.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,442 copying src/PhyNetPy/GTR.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,444 copying src/PhyNetPy/Move.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,447 copying src/PhyNetPy/Newick.py -> build/lib/PhyNetPy 2023-07-23T05:59:39,448 running egg_info 2023-07-23T05:59:39,465 writing src/PhyNetPy.egg-info/PKG-INFO 2023-07-23T05:59:39,466 writing dependency_links to src/PhyNetPy.egg-info/dependency_links.txt 2023-07-23T05:59:39,468 writing requirements to src/PhyNetPy.egg-info/requires.txt 2023-07-23T05:59:39,469 writing top-level names to src/PhyNetPy.egg-info/top_level.txt 2023-07-23T05:59:39,477 reading manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:39,479 adding license file 'LICENSE' 2023-07-23T05:59:39,482 writing manifest file 'src/PhyNetPy.egg-info/SOURCES.txt' 2023-07-23T05:59:39,498 installing to build/bdist.linux-armv7l/wheel 2023-07-23T05:59:39,498 running install 2023-07-23T05:59:39,523 running install_lib 2023-07-23T05:59:39,530 creating build/bdist.linux-armv7l 2023-07-23T05:59:39,530 creating build/bdist.linux-armv7l/wheel 2023-07-23T05:59:39,532 creating build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,533 copying build/lib/PhyNetPy/GeneTrees.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,535 copying build/lib/PhyNetPy/Graph.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,538 copying build/lib/PhyNetPy/BirthDeath.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,540 copying build/lib/PhyNetPy/Matrix.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,542 copying build/lib/PhyNetPy/PhySNP.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,545 copying build/lib/PhyNetPy/MPSugar.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,548 copying build/lib/PhyNetPy/MetropolisHastings.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,551 copying build/lib/PhyNetPy/GTR2.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,553 copying build/lib/PhyNetPy/NetworkParser.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,555 copying build/lib/PhyNetPy/ModelGraph.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,558 copying build/lib/PhyNetPy/Alphabet.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,560 copying build/lib/PhyNetPy/SequenceSim.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,562 copying build/lib/PhyNetPy/State.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,564 copying build/lib/PhyNetPy/MSA.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,566 copying build/lib/PhyNetPy/__init__.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,567 copying build/lib/PhyNetPy/Node.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,570 copying build/lib/PhyNetPy/ModelFactory.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,572 copying build/lib/PhyNetPy/GTR.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,574 copying build/lib/PhyNetPy/Move.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,578 copying build/lib/PhyNetPy/Newick.py -> build/bdist.linux-armv7l/wheel/PhyNetPy 2023-07-23T05:59:39,580 running install_egg_info 2023-07-23T05:59:39,590 Copying src/PhyNetPy.egg-info to build/bdist.linux-armv7l/wheel/PhyNetPy-0.0.8-py3.9.egg-info 2023-07-23T05:59:39,601 running install_scripts 2023-07-23T05:59:39,619 creating build/bdist.linux-armv7l/wheel/PhyNetPy-0.0.8.dist-info/WHEEL 2023-07-23T05:59:39,622 creating '/tmp/pip-wheel-r7tkts4q/.tmp-vmo404rq/PhyNetPy-0.0.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-23T05:59:39,625 adding 'PhyNetPy/Alphabet.py' 2023-07-23T05:59:39,629 adding 'PhyNetPy/BirthDeath.py' 2023-07-23T05:59:39,631 adding 'PhyNetPy/GTR.py' 2023-07-23T05:59:39,633 adding 'PhyNetPy/GTR2.py' 2023-07-23T05:59:39,635 adding 'PhyNetPy/GeneTrees.py' 2023-07-23T05:59:39,639 adding 'PhyNetPy/Graph.py' 2023-07-23T05:59:39,645 adding 'PhyNetPy/MPSugar.py' 2023-07-23T05:59:39,647 adding 'PhyNetPy/MSA.py' 2023-07-23T05:59:39,650 adding 'PhyNetPy/Matrix.py' 2023-07-23T05:59:39,652 adding 'PhyNetPy/MetropolisHastings.py' 2023-07-23T05:59:39,654 adding 'PhyNetPy/ModelFactory.py' 2023-07-23T05:59:39,661 adding 'PhyNetPy/ModelGraph.py' 2023-07-23T05:59:39,667 adding 'PhyNetPy/Move.py' 2023-07-23T05:59:39,669 adding 'PhyNetPy/NetworkParser.py' 2023-07-23T05:59:39,671 adding 'PhyNetPy/Newick.py' 2023-07-23T05:59:39,673 adding 'PhyNetPy/Node.py' 2023-07-23T05:59:39,677 adding 'PhyNetPy/PhySNP.py' 2023-07-23T05:59:39,679 adding 'PhyNetPy/SequenceSim.py' 2023-07-23T05:59:39,681 adding 'PhyNetPy/State.py' 2023-07-23T05:59:39,682 adding 'PhyNetPy/__init__.py' 2023-07-23T05:59:39,685 adding 'PhyNetPy-0.0.8.dist-info/LICENSE' 2023-07-23T05:59:39,686 adding 'PhyNetPy-0.0.8.dist-info/METADATA' 2023-07-23T05:59:39,688 adding 'PhyNetPy-0.0.8.dist-info/WHEEL' 2023-07-23T05:59:39,689 adding 'PhyNetPy-0.0.8.dist-info/top_level.txt' 2023-07-23T05:59:39,690 adding 'PhyNetPy-0.0.8.dist-info/zip-safe' 2023-07-23T05:59:39,691 adding 'PhyNetPy-0.0.8.dist-info/RECORD' 2023-07-23T05:59:39,694 removing build/bdist.linux-armv7l/wheel 2023-07-23T05:59:39,775 Building wheel for phynetpy (pyproject.toml): finished with status 'done' 2023-07-23T05:59:39,782 Created wheel for phynetpy: filename=PhyNetPy-0.0.8-py3-none-any.whl size=82454 sha256=a2de25eda6a0d35c114a9fe90ed21157ecc2e5d5ad8c1fcd602ce24b9ffd22b3 2023-07-23T05:59:39,783 Stored in directory: /tmp/pip-ephem-wheel-cache-3yqz3mgd/wheels/2a/2d/f8/c3a603a941324f17822c40a3084b574960f8ea4b9ae0874b23 2023-07-23T05:59:39,795 Successfully built phynetpy 2023-07-23T05:59:39,801 Removed build tracker: '/tmp/pip-build-tracker-hremrusk'