2023-07-28T09:29:25,997 Created temporary directory: /tmp/pip-build-tracker-4bm244lt 2023-07-28T09:29:26,000 Initialized build tracking at /tmp/pip-build-tracker-4bm244lt 2023-07-28T09:29:26,001 Created build tracker: /tmp/pip-build-tracker-4bm244lt 2023-07-28T09:29:26,002 Entered build tracker: /tmp/pip-build-tracker-4bm244lt 2023-07-28T09:29:26,003 Created temporary directory: /tmp/pip-wheel-oq6n45oi 2023-07-28T09:29:26,011 Created temporary directory: /tmp/pip-ephem-wheel-cache-sy_czh7i 2023-07-28T09:29:26,063 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-28T09:29:26,071 2 location(s) to search for versions of nanomonsv: 2023-07-28T09:29:26,071 * https://pypi.org/simple/nanomonsv/ 2023-07-28T09:29:26,071 * https://www.piwheels.org/simple/nanomonsv/ 2023-07-28T09:29:26,073 Fetching project page and analyzing links: https://pypi.org/simple/nanomonsv/ 2023-07-28T09:29:26,074 Getting page https://pypi.org/simple/nanomonsv/ 2023-07-28T09:29:26,078 Found index url https://pypi.org/simple/ 2023-07-28T09:29:26,263 Fetched page https://pypi.org/simple/nanomonsv/ as application/vnd.pypi.simple.v1+json 2023-07-28T09:29:26,278 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/86/c2/7875348ad082d536efc388fb6fac2e6cc8860da5a4df7226646e31360f18/nanomonsv-0.2.0b1-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,278 Found link https://files.pythonhosted.org/packages/60/2f/6a86517466677525216473caa779a32411d0cfdf993a98db1f78d06994e5/nanomonsv-0.2.0b1.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.2.0b1 2023-07-28T09:29:26,279 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/ac/1d/e136a4f2c99217dc97c964ed57f0e5293a4357dc63861491db2ddad25e2a/nanomonsv-0.2.0b2-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,280 Found link https://files.pythonhosted.org/packages/18/6c/eefa4e71663b56b41fcc686be2661022da9570820d4b158e3c00666e608b/nanomonsv-0.2.0b2.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.2.0b2 2023-07-28T09:29:26,281 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/43/d0/2f35010f5238ee752950d2045d4272eb0586c4a9bd1d4edd0976cd743b1d/nanomonsv-0.2.0b3-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,281 Found link https://files.pythonhosted.org/packages/3a/b2/24335e5cac284d0b23fe89d01c134f88c2728ea22aa318e6c3e14fd5923a/nanomonsv-0.2.0b3.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.2.0b3 2023-07-28T09:29:26,282 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/98/c8/56e1b52cb06b80fee5343f236287736108317813f030eba3dcf93e221ff9/nanomonsv-0.2.0-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,282 Found link https://files.pythonhosted.org/packages/6a/0a/8ca5cd1f3cffbee8f9351d29868b279589b045615586c8ba34978261ee89/nanomonsv-0.2.0.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.2.0 2023-07-28T09:29:26,283 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/c6/20/5e322748ed7a6385b77d806086968503631349583a804f894bc163618bc7/nanomonsv-0.3.0-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,284 Found link https://files.pythonhosted.org/packages/e6/c3/8a109548e162a81c53ad13a14ace41560d56b09af751065db7c6f3d5ae91/nanomonsv-0.3.0.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.3.0 2023-07-28T09:29:26,284 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/fc/5c/9b0a333fa811a928e889de64211ee16e94444be4c5a65486e892e28745a6/nanomonsv-0.4.0b1-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,285 Found link https://files.pythonhosted.org/packages/b0/cc/11a5284b555de40a6b8434cb0e376d512ce99908a2cde3b1291691f34700/nanomonsv-0.4.0b1.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.4.0b1 2023-07-28T09:29:26,286 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/94/01/b058a48c94ef25fa011a5c0a08b09d210b83b4927820395f546d29d35bf6/nanomonsv-0.4.0b2-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,286 Found link https://files.pythonhosted.org/packages/33/31/bfa9a016b29480dc07accf15d2bfb1ccc846c442680e872f97094de58305/nanomonsv-0.4.0b2.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.4.0b2 2023-07-28T09:29:26,287 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/e7/66/c8bbf6feaf08a3ede4a0e56aafccb07a145741a9df4f5f3bbfbca9717a45/nanomonsv-0.4.0-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,288 Found link https://files.pythonhosted.org/packages/f4/da/179916ab642904fddc77eee57387c0b5df3c99b6061f2ac7f797ffd212d3/nanomonsv-0.4.0.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.4.0 2023-07-28T09:29:26,288 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/98/57/63fdd2b1aabeef1963bd3d7c9275d2f07c483ce0ca39a570c86eec02975c/nanomonsv-0.5.0b2-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,289 Found link https://files.pythonhosted.org/packages/09/67/cc66666ed48a2034c5b56f9cf7e0a66deac7ad90dfec88deb42d07eb7f85/nanomonsv-0.5.0b2.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.5.0b2 2023-07-28T09:29:26,289 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/07/87/b26f1ff2e850ca19ea236e6f61bdcd2476b34f3cef50d710945ffa454d66/nanomonsv-0.5.0-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,290 Found link https://files.pythonhosted.org/packages/25/cc/e7730b3c34d262d00eabdefd2c5fb4f7fe189eb308fd8986a69c1975d919/nanomonsv-0.5.0.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.5.0 2023-07-28T09:29:26,291 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/04/52/9613a8824bad6ecd8781f166b955ca208201c78de9714887976d9ef9000c/nanomonsv-0.5.1-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,291 Found link https://files.pythonhosted.org/packages/a4/04/1136089512a8050178b741ea64c910f19fed3ed06035d7058434b4503bf1/nanomonsv-0.5.1.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.5.1 2023-07-28T09:29:26,292 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/a5/f5/d1b42c1b096249dad8a9eaa02957c56327a77f8dda332c4087759f270851/nanomonsv-0.6.0-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,293 Found link https://files.pythonhosted.org/packages/96/8c/6525a958c684b50ffcfbe6a23a256a84af3bc2f0149c44350905adb96940/nanomonsv-0.6.0.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.6.0 2023-07-28T09:29:26,293 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/47/33/abc719184603650a0b3d8b7dcec0e99297e7541e3a33e807728d2c7ed20b/nanomonsv-0.7.0-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,294 Found link https://files.pythonhosted.org/packages/da/ac/138e4e0d794c91e35f8c446052200544bce864f4a237a8f9b9cc2e67c937/nanomonsv-0.7.0.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.7.0 2023-07-28T09:29:26,294 Skipping link: No binaries permitted for nanomonsv: https://files.pythonhosted.org/packages/33/04/1232c2d4575abd715ca7fbb58435c11cf66f655f52c6307f95dc63b7a88a/nanomonsv-0.7.1-py3-none-any.whl (from https://pypi.org/simple/nanomonsv/) 2023-07-28T09:29:26,295 Found link https://files.pythonhosted.org/packages/b1/46/d041d265d6ac53bb6979b475b30df43f02e47a1481d0f36816d033918927/nanomonsv-0.7.1.tar.gz (from https://pypi.org/simple/nanomonsv/), version: 0.7.1 2023-07-28T09:29:26,296 Fetching project page and analyzing links: https://www.piwheels.org/simple/nanomonsv/ 2023-07-28T09:29:26,297 Getting page https://www.piwheels.org/simple/nanomonsv/ 2023-07-28T09:29:26,299 Found index url https://www.piwheels.org/simple/ 2023-07-28T09:29:26,560 Fetched page https://www.piwheels.org/simple/nanomonsv/ as text/html 2023-07-28T09:29:26,573 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.7.0-py3-none-any.whl#sha256=cd58ad4c8bebda8cb12423c35d13c8778f838403b6c18dbd101d9d6da40cdf4d (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,574 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.6.0-py3-none-any.whl#sha256=cb2aeaae31c3e0fedc3ede06bd8a25ea5db95b00da9ae24c4ee6197e619949a9 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,574 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.5.1-py3-none-any.whl#sha256=2b59c98330574680dcf18680d624015035dcb796c50eea658615f645782c2584 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,575 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.5.0-py3-none-any.whl#sha256=dfc6bd7c2b7944d8f12a46e535e89bd37c927a5203dd44cd8f82d70aca9b82b2 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,575 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.5.0b2-py3-none-any.whl#sha256=8e5a4495ff5e3a8d7c9bd6e17a2caf86d12c52817b420176aae07ecb79fba651 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,576 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.4.0-py3-none-any.whl#sha256=9242ee898c9166b7b7b52e49af892bb4b614ce8be78f838952217b90b0733363 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,576 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.4.0b2-py3-none-any.whl#sha256=eabeb3034df7d19e5f305260f9aa5fc3b32de56ea54659ee96230124eaf34dfa (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,577 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.4.0b1-py3-none-any.whl#sha256=a27a8be2cecb85df70b2f132954242da370eea197b1f2a4efcaecbdbe775d906 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,578 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.3.0-py3-none-any.whl#sha256=60c30b67d806fac731eb67ed5cfb2db3abd1ea735d6fcc2f2bcb82ecd70438bd (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,578 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.2.0-py3-none-any.whl#sha256=663ae38643f269f3a86a23453093f1e2def4a6be649c5a7459a5462e70906c2f (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,578 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.2.0b3-py3-none-any.whl#sha256=af9d6df96ad8b0c093ffa061ec387ddbc63acc9a96d6011b3fe533d0f4b93825 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,579 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.2.0b2-py3-none-any.whl#sha256=ed523c14020f9d0a81a3dae05e1c549b41ab7caf99fa3d40f414e48d60e34745 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,579 Skipping link: No binaries permitted for nanomonsv: https://www.piwheels.org/simple/nanomonsv/nanomonsv-0.2.0b1-py3-none-any.whl#sha256=e1b3f57d8ac46982010d6fc5c74b8e1e735513a5cde24f8f658650bd1874f242 (from https://www.piwheels.org/simple/nanomonsv/) 2023-07-28T09:29:26,580 Skipping link: not a file: https://www.piwheels.org/simple/nanomonsv/ 2023-07-28T09:29:26,580 Skipping link: not a file: https://pypi.org/simple/nanomonsv/ 2023-07-28T09:29:26,616 Given no hashes to check 1 links for project 'nanomonsv': discarding no candidates 2023-07-28T09:29:26,651 Collecting nanomonsv==0.7.1 2023-07-28T09:29:26,656 Created temporary directory: /tmp/pip-unpack-8_1_p4cb 2023-07-28T09:29:26,830 Downloading nanomonsv-0.7.1.tar.gz (526 kB) 2023-07-28T09:29:27,247 Added nanomonsv==0.7.1 from https://files.pythonhosted.org/packages/b1/46/d041d265d6ac53bb6979b475b30df43f02e47a1481d0f36816d033918927/nanomonsv-0.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-4bm244lt' 2023-07-28T09:29:27,250 Running setup.py (path:/tmp/pip-wheel-oq6n45oi/nanomonsv_9ea5b19d75b74b28a32da2c50fba71e4/setup.py) egg_info for package nanomonsv 2023-07-28T09:29:27,252 Created temporary directory: /tmp/pip-pip-egg-info-4074o1ym 2023-07-28T09:29:27,252 Preparing metadata (setup.py): started 2023-07-28T09:29:27,254 Running command python setup.py egg_info 2023-07-28T09:29:28,744 running egg_info 2023-07-28T09:29:28,753 creating /tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info 2023-07-28T09:29:28,817 writing /tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/PKG-INFO 2023-07-28T09:29:28,823 writing dependency_links to /tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/dependency_links.txt 2023-07-28T09:29:28,827 writing entry points to /tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/entry_points.txt 2023-07-28T09:29:28,830 writing top-level names to /tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/top_level.txt 2023-07-28T09:29:28,833 writing manifest file '/tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/SOURCES.txt' 2023-07-28T09:29:29,040 reading manifest file '/tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/SOURCES.txt' 2023-07-28T09:29:29,043 adding license file 'LICENSE' 2023-07-28T09:29:29,050 writing manifest file '/tmp/pip-pip-egg-info-4074o1ym/nanomonsv.egg-info/SOURCES.txt' 2023-07-28T09:29:29,170 Preparing metadata (setup.py): finished with status 'done' 2023-07-28T09:29:29,183 Source in /tmp/pip-wheel-oq6n45oi/nanomonsv_9ea5b19d75b74b28a32da2c50fba71e4 has version 0.7.1, which satisfies requirement nanomonsv==0.7.1 from https://files.pythonhosted.org/packages/b1/46/d041d265d6ac53bb6979b475b30df43f02e47a1481d0f36816d033918927/nanomonsv-0.7.1.tar.gz 2023-07-28T09:29:29,185 Removed nanomonsv==0.7.1 from https://files.pythonhosted.org/packages/b1/46/d041d265d6ac53bb6979b475b30df43f02e47a1481d0f36816d033918927/nanomonsv-0.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-4bm244lt' 2023-07-28T09:29:29,197 Created temporary directory: /tmp/pip-unpack-adf1_2cl 2023-07-28T09:29:29,198 Building wheels for collected packages: nanomonsv 2023-07-28T09:29:29,209 Created temporary directory: /tmp/pip-wheel-y2f3fsli 2023-07-28T09:29:29,210 Building wheel for nanomonsv (setup.py): started 2023-07-28T09:29:29,212 Destination directory: /tmp/pip-wheel-y2f3fsli 2023-07-28T09:29:29,212 Running command python setup.py bdist_wheel 2023-07-28T09:29:30,766 running bdist_wheel 2023-07-28T09:29:31,477 running build 2023-07-28T09:29:31,478 running build_py 2023-07-28T09:29:31,553 creating build 2023-07-28T09:29:31,554 creating build/lib 2023-07-28T09:29:31,556 creating build/lib/nanomonsv 2023-07-28T09:29:31,558 copying nanomonsv/insert_classify.py -> build/lib/nanomonsv 2023-07-28T09:29:31,564 copying nanomonsv/parse.py -> build/lib/nanomonsv 2023-07-28T09:29:31,570 copying nanomonsv/pyssw.py -> build/lib/nanomonsv 2023-07-28T09:29:31,575 copying nanomonsv/arg_parser.py -> build/lib/nanomonsv 2023-07-28T09:29:31,580 copying nanomonsv/version.py -> build/lib/nanomonsv 2023-07-28T09:29:31,584 copying nanomonsv/my_seq.py -> build/lib/nanomonsv 2023-07-28T09:29:31,588 copying nanomonsv/cluster.py -> build/lib/nanomonsv 2023-07-28T09:29:31,594 copying nanomonsv/vcf_convert.py -> build/lib/nanomonsv 2023-07-28T09:29:31,598 copying nanomonsv/swalign.py -> build/lib/nanomonsv 2023-07-28T09:29:31,604 copying nanomonsv/logger.py -> build/lib/nanomonsv 2023-07-28T09:29:31,608 copying nanomonsv/locate_bp_sbnd.py -> build/lib/nanomonsv 2023-07-28T09:29:31,612 copying nanomonsv/merge_control.py -> build/lib/nanomonsv 2023-07-28T09:29:31,616 copying nanomonsv/gather_support_read_seq.py -> build/lib/nanomonsv 2023-07-28T09:29:31,622 copying nanomonsv/count_sread_by_alignment.py -> build/lib/nanomonsv 2023-07-28T09:29:31,628 copying nanomonsv/ssw_lib.py -> build/lib/nanomonsv 2023-07-28T09:29:31,633 copying nanomonsv/cluster_sbnd.py -> build/lib/nanomonsv 2023-07-28T09:29:31,639 copying nanomonsv/post_proc.py -> build/lib/nanomonsv 2023-07-28T09:29:31,644 copying nanomonsv/utils.py -> build/lib/nanomonsv 2023-07-28T09:29:31,648 copying nanomonsv/smith_waterman.py -> build/lib/nanomonsv 2023-07-28T09:29:31,653 copying nanomonsv/run.py -> build/lib/nanomonsv 2023-07-28T09:29:31,660 copying nanomonsv/__init__.py -> build/lib/nanomonsv 2023-07-28T09:29:31,664 copying nanomonsv/filt.py -> build/lib/nanomonsv 2023-07-28T09:29:31,669 copying nanomonsv/long_read_validate.py -> build/lib/nanomonsv 2023-07-28T09:29:31,674 copying nanomonsv/generate_consensus.py -> build/lib/nanomonsv 2023-07-28T09:29:31,679 copying nanomonsv/locate_bp.py -> build/lib/nanomonsv 2023-07-28T09:29:31,685 creating build/lib/nanomonsv/data 2023-07-28T09:29:31,686 copying nanomonsv/data/LINE1.hg38.bed.gz.tbi -> build/lib/nanomonsv/data 2023-07-28T09:29:31,696 copying nanomonsv/data/LINE1.hg19.bed.gz -> build/lib/nanomonsv/data 2023-07-28T09:29:31,708 copying nanomonsv/data/LINE1.hg38.bed.gz -> build/lib/nanomonsv/data 2023-07-28T09:29:31,720 copying nanomonsv/data/LINE1.hg19.bed.gz.tbi -> build/lib/nanomonsv/data 2023-07-28T09:29:31,808 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-07-28T09:29:31,809 !! 2023-07-28T09:29:31,810 ******************************************************************************** 2023-07-28T09:29:31,810 Please avoid running ``setup.py`` directly. 2023-07-28T09:29:31,810 Instead, use pypa/build, pypa/installer, pypa/build or 2023-07-28T09:29:31,811 other standards-based tools. 2023-07-28T09:29:31,811 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-07-28T09:29:31,812 ******************************************************************************** 2023-07-28T09:29:31,813 !! 2023-07-28T09:29:31,813 self.initialize_options() 2023-07-28T09:29:31,877 installing to build/bdist.linux-armv7l/wheel 2023-07-28T09:29:31,877 running install 2023-07-28T09:29:31,937 running install_lib 2023-07-28T09:29:32,007 creating build/bdist.linux-armv7l 2023-07-28T09:29:32,008 creating build/bdist.linux-armv7l/wheel 2023-07-28T09:29:32,013 creating build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,015 copying build/lib/nanomonsv/insert_classify.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,021 copying build/lib/nanomonsv/parse.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,026 copying build/lib/nanomonsv/pyssw.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,032 copying build/lib/nanomonsv/arg_parser.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,036 copying build/lib/nanomonsv/version.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,039 copying build/lib/nanomonsv/my_seq.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,045 creating build/bdist.linux-armv7l/wheel/nanomonsv/data 2023-07-28T09:29:32,046 copying build/lib/nanomonsv/data/LINE1.hg38.bed.gz.tbi -> build/bdist.linux-armv7l/wheel/nanomonsv/data 2023-07-28T09:29:32,055 copying build/lib/nanomonsv/data/LINE1.hg19.bed.gz -> build/bdist.linux-armv7l/wheel/nanomonsv/data 2023-07-28T09:29:32,066 copying build/lib/nanomonsv/data/LINE1.hg38.bed.gz -> build/bdist.linux-armv7l/wheel/nanomonsv/data 2023-07-28T09:29:32,076 copying build/lib/nanomonsv/data/LINE1.hg19.bed.gz.tbi -> build/bdist.linux-armv7l/wheel/nanomonsv/data 2023-07-28T09:29:32,084 copying build/lib/nanomonsv/cluster.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,089 copying build/lib/nanomonsv/vcf_convert.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,094 copying build/lib/nanomonsv/swalign.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,099 copying build/lib/nanomonsv/logger.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,103 copying build/lib/nanomonsv/locate_bp_sbnd.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,107 copying build/lib/nanomonsv/merge_control.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,111 copying build/lib/nanomonsv/gather_support_read_seq.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,115 copying build/lib/nanomonsv/count_sread_by_alignment.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,120 copying build/lib/nanomonsv/ssw_lib.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,125 copying build/lib/nanomonsv/cluster_sbnd.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,129 copying build/lib/nanomonsv/post_proc.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,133 copying build/lib/nanomonsv/utils.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,137 copying build/lib/nanomonsv/smith_waterman.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,141 copying build/lib/nanomonsv/run.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,146 copying build/lib/nanomonsv/__init__.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,150 copying build/lib/nanomonsv/filt.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,155 copying build/lib/nanomonsv/long_read_validate.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,160 copying build/lib/nanomonsv/generate_consensus.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,165 copying build/lib/nanomonsv/locate_bp.py -> build/bdist.linux-armv7l/wheel/nanomonsv 2023-07-28T09:29:32,169 running install_egg_info 2023-07-28T09:29:32,337 running egg_info 2023-07-28T09:29:32,402 writing nanomonsv.egg-info/PKG-INFO 2023-07-28T09:29:32,407 writing dependency_links to nanomonsv.egg-info/dependency_links.txt 2023-07-28T09:29:32,412 writing entry points to nanomonsv.egg-info/entry_points.txt 2023-07-28T09:29:32,416 writing top-level names to nanomonsv.egg-info/top_level.txt 2023-07-28T09:29:32,494 reading manifest file 'nanomonsv.egg-info/SOURCES.txt' 2023-07-28T09:29:32,500 adding license file 'LICENSE' 2023-07-28T09:29:32,508 writing manifest file 'nanomonsv.egg-info/SOURCES.txt' 2023-07-28T09:29:32,512 Copying nanomonsv.egg-info to build/bdist.linux-armv7l/wheel/nanomonsv-0.7.1-py3.7.egg-info 2023-07-28T09:29:32,533 running install_scripts 2023-07-28T09:29:32,569 creating build/bdist.linux-armv7l/wheel/nanomonsv-0.7.1.dist-info/WHEEL 2023-07-28T09:29:32,575 creating '/tmp/pip-wheel-y2f3fsli/nanomonsv-0.7.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-28T09:29:32,580 adding 'nanomonsv/__init__.py' 2023-07-28T09:29:32,586 adding 'nanomonsv/arg_parser.py' 2023-07-28T09:29:32,592 adding 'nanomonsv/cluster.py' 2023-07-28T09:29:32,596 adding 'nanomonsv/cluster_sbnd.py' 2023-07-28T09:29:32,601 adding 'nanomonsv/count_sread_by_alignment.py' 2023-07-28T09:29:32,607 adding 'nanomonsv/filt.py' 2023-07-28T09:29:32,610 adding 'nanomonsv/gather_support_read_seq.py' 2023-07-28T09:29:32,615 adding 'nanomonsv/generate_consensus.py' 2023-07-28T09:29:32,622 adding 'nanomonsv/insert_classify.py' 2023-07-28T09:29:32,626 adding 'nanomonsv/locate_bp.py' 2023-07-28T09:29:32,629 adding 'nanomonsv/locate_bp_sbnd.py' 2023-07-28T09:29:32,631 adding 'nanomonsv/logger.py' 2023-07-28T09:29:32,639 adding 'nanomonsv/long_read_validate.py' 2023-07-28T09:29:32,642 adding 'nanomonsv/merge_control.py' 2023-07-28T09:29:32,645 adding 'nanomonsv/my_seq.py' 2023-07-28T09:29:32,649 adding 'nanomonsv/parse.py' 2023-07-28T09:29:32,656 adding 'nanomonsv/post_proc.py' 2023-07-28T09:29:32,661 adding 'nanomonsv/pyssw.py' 2023-07-28T09:29:32,668 adding 'nanomonsv/run.py' 2023-07-28T09:29:32,672 adding 'nanomonsv/smith_waterman.py' 2023-07-28T09:29:32,677 adding 'nanomonsv/ssw_lib.py' 2023-07-28T09:29:32,683 adding 'nanomonsv/swalign.py' 2023-07-28T09:29:32,686 adding 'nanomonsv/utils.py' 2023-07-28T09:29:32,690 adding 'nanomonsv/vcf_convert.py' 2023-07-28T09:29:32,692 adding 'nanomonsv/version.py' 2023-07-28T09:29:32,743 adding 'nanomonsv/data/LINE1.hg19.bed.gz' 2023-07-28T09:29:32,770 adding 'nanomonsv/data/LINE1.hg19.bed.gz.tbi' 2023-07-28T09:29:32,821 adding 'nanomonsv/data/LINE1.hg38.bed.gz' 2023-07-28T09:29:32,849 adding 'nanomonsv/data/LINE1.hg38.bed.gz.tbi' 2023-07-28T09:29:32,868 adding 'nanomonsv-0.7.1.dist-info/LICENSE' 2023-07-28T09:29:32,874 adding 'nanomonsv-0.7.1.dist-info/METADATA' 2023-07-28T09:29:32,876 adding 'nanomonsv-0.7.1.dist-info/WHEEL' 2023-07-28T09:29:32,878 adding 'nanomonsv-0.7.1.dist-info/entry_points.txt' 2023-07-28T09:29:32,880 adding 'nanomonsv-0.7.1.dist-info/top_level.txt' 2023-07-28T09:29:32,882 adding 'nanomonsv-0.7.1.dist-info/RECORD' 2023-07-28T09:29:32,905 removing build/bdist.linux-armv7l/wheel 2023-07-28T09:29:33,081 Building wheel for nanomonsv (setup.py): finished with status 'done' 2023-07-28T09:29:33,104 Created wheel for nanomonsv: filename=nanomonsv-0.7.1-py3-none-any.whl size=530610 sha256=433b7b397e0c575bf1f76066b518676b010e83ec09450347c748b6be7d4945cb 2023-07-28T09:29:33,106 Stored in directory: /tmp/pip-ephem-wheel-cache-sy_czh7i/wheels/ec/3d/26/61185dd3857e25726c683be6fb8d8e8911cd2f752b58340bf3 2023-07-28T09:29:33,141 Successfully built nanomonsv 2023-07-28T09:29:33,188 Removed build tracker: '/tmp/pip-build-tracker-4bm244lt'