2023-07-29T00:43:54,297 Created temporary directory: /tmp/pip-build-tracker-h6ft8dws 2023-07-29T00:43:54,300 Initialized build tracking at /tmp/pip-build-tracker-h6ft8dws 2023-07-29T00:43:54,300 Created build tracker: /tmp/pip-build-tracker-h6ft8dws 2023-07-29T00:43:54,301 Entered build tracker: /tmp/pip-build-tracker-h6ft8dws 2023-07-29T00:43:54,302 Created temporary directory: /tmp/pip-wheel-4g019fgg 2023-07-29T00:43:54,310 Created temporary directory: /tmp/pip-ephem-wheel-cache-sdplib1m 2023-07-29T00:43:54,362 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-29T00:43:54,370 2 location(s) to search for versions of meeko: 2023-07-29T00:43:54,370 * https://pypi.org/simple/meeko/ 2023-07-29T00:43:54,370 * https://www.piwheels.org/simple/meeko/ 2023-07-29T00:43:54,371 Fetching project page and analyzing links: https://pypi.org/simple/meeko/ 2023-07-29T00:43:54,372 Getting page https://pypi.org/simple/meeko/ 2023-07-29T00:43:54,377 Found index url https://pypi.org/simple/ 2023-07-29T00:43:54,562 Fetched page https://pypi.org/simple/meeko/ as application/vnd.pypi.simple.v1+json 2023-07-29T00:43:54,572 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/38/c7/946dda1732a3aeca878b9cf1aa1a965066488479d67e4fc137d2379a79b6/meeko-0.1.dev1-py2.py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,573 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/61/30/79ecf599df2c81ead389544f3291774adddccb3ac4548eae61a7b8a62bc3/meeko-0.1.dev2-py2.py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,573 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/89/84/827a0ea853ba0970f0287eb09ba7d07186590a510d10a8b63a2d884ac447/meeko-0.1.dev3-py2.py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,575 Found link https://files.pythonhosted.org/packages/ec/d2/c1eaf8b818377fbe788daf86dc8994fcc4ae2d4b6fa00c2a5c81d8aa2ca6/meeko-0.1.dev3.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.1.dev3 2023-07-29T00:43:54,575 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/f1/b6/fe6205ca310917d121b6f96259c845d94ef627d7473fc2bd119235b5b8d3/meeko-0.2-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,577 Found link https://files.pythonhosted.org/packages/23/24/36f5b53aa74cd50f5e6cea8d5d5f3b99b6f3ea1e2a059d13f5f8d51a0624/meeko-0.2.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.2 2023-07-29T00:43:54,577 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/15/e4/e0195c8d07d6c9226c9940ecb9164e6120e9502f64bee2a6303fb0a75ca1/meeko-0.3.0-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,579 Found link https://files.pythonhosted.org/packages/1b/e5/ff954b3fbef337ac7cd0d29ebab8864385aad66fe528aae73d05604dddfd/meeko-0.3.0.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.3.0 2023-07-29T00:43:54,579 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/7a/ff/6e57ed90d6384e76ea2acb31a929f8f036468e07c80319764805398db9d8/meeko-0.3.1-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,581 Found link https://files.pythonhosted.org/packages/33/b4/3a1d12da1c3bc0c7381c51aec8e51206f2b28b8c394b23cc4b373593c478/meeko-0.3.1.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.3.1 2023-07-29T00:43:54,581 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/1a/9d/28755e7eb7679082f4e00ef3e9ad3365e9f90c0d341e95289306a7d10831/meeko-0.3.2-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,583 Found link https://files.pythonhosted.org/packages/04/fd/03d4d7fb97c6ce5789eea55cc8a5a27b3c9ba2e9e8944c46855d0356786d/meeko-0.3.2.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.3.2 2023-07-29T00:43:54,583 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/53/ae/fb019569a4c5d74bcd83434261e41b322aacfae687f38b1c8596c24be8b2/meeko-0.3.3-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,585 Found link https://files.pythonhosted.org/packages/97/42/a9846a4bd8c90d8cf64857e183f3dc55f0553bad814a25ad9e454d51092b/meeko-0.3.3.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.3.3 2023-07-29T00:43:54,585 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/a1/38/e64382d54a507d7cd9b25472e91476d105e312ae8e3f88feacbd3ed6c4ca/meeko-0.4.0-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,587 Found link https://files.pythonhosted.org/packages/df/e8/5599f1f3b4d82a6fd509e9ba1494866c9be26cb9cba57cffe433fb6573e1/meeko-0.4.0.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5.*), version: 0.4.0 2023-07-29T00:43:54,587 Skipping link: No binaries permitted for meeko: https://files.pythonhosted.org/packages/0f/97/aaae239d66f408f0d58c949bf4bc7c62add39fbf9ff22733fb087937ca82/meeko-0.5.0-py3-none-any.whl (from https://pypi.org/simple/meeko/) (requires-python:>=3.5) 2023-07-29T00:43:54,589 Found link https://files.pythonhosted.org/packages/78/17/8947c029c13d2f55f3a4833e17722dd275f94b10a7c32914374981eb8c8e/meeko-0.5.0.tar.gz (from https://pypi.org/simple/meeko/) (requires-python:>=3.5), version: 0.5.0 2023-07-29T00:43:54,590 Fetching project page and analyzing links: https://www.piwheels.org/simple/meeko/ 2023-07-29T00:43:54,590 Getting page https://www.piwheels.org/simple/meeko/ 2023-07-29T00:43:54,593 Found index url https://www.piwheels.org/simple/ 2023-07-29T00:43:54,802 Fetched page https://www.piwheels.org/simple/meeko/ as text/html 2023-07-29T00:43:54,809 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.4.0-py3-none-any.whl#sha256=ab401b9be3dd1941184d0ad836b51fc577db7d02d277f08ffc26285d54a6ee5e (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,810 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.3.3-py3-none-any.whl#sha256=f226db6d061657ac79463f4cc9b02ac1639cff39efeee9d289820c1fc6895382 (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,810 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.3.2-py3-none-any.whl#sha256=c36d011eb03705ad1d8fd598ce5e441b9c55c76b1c37011d95563b4fe5449494 (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,811 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.3.1-py3-none-any.whl#sha256=628a26bdbddab96cde118d3180a404144108c33edcbbefe3ade9e84f286cece0 (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,811 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.3.0-py3-none-any.whl#sha256=508ada8f77e474225a99c3905e6eb53c7db2a45a02c84a774d9f78a889a8da1d (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,812 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.2-py3-none-any.whl#sha256=88c75d8ed22efc73b451ac641472aa931ccbf3ef36f2f236c14a2d45d58541b2 (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,812 Skipping link: No binaries permitted for meeko: https://www.piwheels.org/simple/meeko/meeko-0.1.dev3-py2.py3-none-any.whl#sha256=feb4d48b05302efc1168ac2365ebfa920dd98fe24fca3f5cafe60376ed796caa (from https://www.piwheels.org/simple/meeko/) (requires-python:>=3.5.*) 2023-07-29T00:43:54,813 Skipping link: not a file: https://www.piwheels.org/simple/meeko/ 2023-07-29T00:43:54,813 Skipping link: not a file: https://pypi.org/simple/meeko/ 2023-07-29T00:43:54,848 Given no hashes to check 1 links for project 'meeko': discarding no candidates 2023-07-29T00:43:54,878 Collecting meeko==0.5.0 2023-07-29T00:43:54,883 Created temporary directory: /tmp/pip-unpack-8sqz6lmy 2023-07-29T00:43:55,055 Downloading meeko-0.5.0.tar.gz (110 kB) 2023-07-29T00:43:55,385 Added meeko==0.5.0 from https://files.pythonhosted.org/packages/78/17/8947c029c13d2f55f3a4833e17722dd275f94b10a7c32914374981eb8c8e/meeko-0.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-h6ft8dws' 2023-07-29T00:43:55,389 Running setup.py (path:/tmp/pip-wheel-4g019fgg/meeko_a64e71f352f44a5d97aca9438f375e6c/setup.py) egg_info for package meeko 2023-07-29T00:43:55,391 Created temporary directory: /tmp/pip-pip-egg-info-9cob9d3m 2023-07-29T00:43:55,391 Preparing metadata (setup.py): started 2023-07-29T00:43:55,393 Running command python setup.py egg_info 2023-07-29T00:43:56,914 running egg_info 2023-07-29T00:43:56,917 creating /tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info 2023-07-29T00:43:56,981 writing /tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/PKG-INFO 2023-07-29T00:43:56,987 writing dependency_links to /tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/dependency_links.txt 2023-07-29T00:43:56,992 writing requirements to /tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/requires.txt 2023-07-29T00:43:56,994 writing top-level names to /tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/top_level.txt 2023-07-29T00:43:56,996 writing manifest file '/tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/SOURCES.txt' 2023-07-29T00:43:57,282 reading manifest file '/tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/SOURCES.txt' 2023-07-29T00:43:57,285 adding license file 'LICENSE' 2023-07-29T00:43:57,293 writing manifest file '/tmp/pip-pip-egg-info-9cob9d3m/meeko.egg-info/SOURCES.txt' 2023-07-29T00:43:57,415 Preparing metadata (setup.py): finished with status 'done' 2023-07-29T00:43:57,433 Source in /tmp/pip-wheel-4g019fgg/meeko_a64e71f352f44a5d97aca9438f375e6c has version 0.5.0, which satisfies requirement meeko==0.5.0 from https://files.pythonhosted.org/packages/78/17/8947c029c13d2f55f3a4833e17722dd275f94b10a7c32914374981eb8c8e/meeko-0.5.0.tar.gz 2023-07-29T00:43:57,435 Removed meeko==0.5.0 from https://files.pythonhosted.org/packages/78/17/8947c029c13d2f55f3a4833e17722dd275f94b10a7c32914374981eb8c8e/meeko-0.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-h6ft8dws' 2023-07-29T00:43:57,454 Created temporary directory: /tmp/pip-unpack-8atnjjgq 2023-07-29T00:43:57,455 Building wheels for collected packages: meeko 2023-07-29T00:43:57,464 Created temporary directory: /tmp/pip-wheel-sv2vi352 2023-07-29T00:43:57,465 Building wheel for meeko (setup.py): started 2023-07-29T00:43:57,467 Destination directory: /tmp/pip-wheel-sv2vi352 2023-07-29T00:43:57,467 Running command python setup.py bdist_wheel 2023-07-29T00:43:59,033 running bdist_wheel 2023-07-29T00:43:59,753 running build 2023-07-29T00:43:59,754 running build_py 2023-07-29T00:43:59,827 creating build 2023-07-29T00:43:59,828 creating build/lib 2023-07-29T00:43:59,829 creating build/lib/meeko 2023-07-29T00:43:59,832 copying meeko/preparation.py -> build/lib/meeko 2023-07-29T00:43:59,836 copying meeko/macrocycle.py -> build/lib/meeko 2023-07-29T00:43:59,841 copying meeko/atomtyper.py -> build/lib/meeko 2023-07-29T00:43:59,846 copying meeko/molecule_pdbqt.py -> build/lib/meeko 2023-07-29T00:43:59,852 copying meeko/rdkit_mol_create.py -> build/lib/meeko 2023-07-29T00:43:59,857 copying meeko/molsetup.py -> build/lib/meeko 2023-07-29T00:43:59,863 copying meeko/flexibility.py -> build/lib/meeko 2023-07-29T00:43:59,867 copying meeko/hydrate.py -> build/lib/meeko 2023-07-29T00:43:59,872 copying meeko/gridbox.py -> build/lib/meeko 2023-07-29T00:43:59,876 copying meeko/reactive.py -> build/lib/meeko 2023-07-29T00:43:59,881 copying meeko/covalentbuilder.py -> build/lib/meeko 2023-07-29T00:43:59,885 copying meeko/bondtyper.py -> build/lib/meeko 2023-07-29T00:43:59,889 copying meeko/writer.py -> build/lib/meeko 2023-07-29T00:43:59,894 copying meeko/__init__.py -> build/lib/meeko 2023-07-29T00:43:59,898 copying meeko/receptor_pdbqt.py -> build/lib/meeko 2023-07-29T00:43:59,904 creating build/lib/meeko/analysis 2023-07-29T00:43:59,906 copying meeko/analysis/interactions.py -> build/lib/meeko/analysis 2023-07-29T00:43:59,911 copying meeko/analysis/fingerprint_interactions.py -> build/lib/meeko/analysis 2023-07-29T00:43:59,915 copying meeko/analysis/__init__.py -> build/lib/meeko/analysis 2023-07-29T00:43:59,921 creating build/lib/meeko/utils 2023-07-29T00:43:59,923 copying meeko/utils/covalent_radius_table.py -> build/lib/meeko/utils 2023-07-29T00:43:59,927 copying meeko/utils/autodock4_atom_types_elements.py -> build/lib/meeko/utils 2023-07-29T00:43:59,930 copying meeko/utils/geomutils.py -> build/lib/meeko/utils 2023-07-29T00:43:59,936 copying meeko/utils/rdkitutils.py -> build/lib/meeko/utils 2023-07-29T00:43:59,939 copying meeko/utils/utils.py -> build/lib/meeko/utils 2023-07-29T00:43:59,944 copying meeko/utils/obutils.py -> build/lib/meeko/utils 2023-07-29T00:43:59,948 copying meeko/utils/__init__.py -> build/lib/meeko/utils 2023-07-29T00:43:59,952 copying meeko/utils/van_der_waals_radius_table.py -> build/lib/meeko/utils 2023-07-29T00:43:59,955 copying meeko/utils/pdbutils.py -> build/lib/meeko/utils 2023-07-29T00:43:59,958 running egg_info 2023-07-29T00:44:00,107 writing meeko.egg-info/PKG-INFO 2023-07-29T00:44:00,112 writing dependency_links to meeko.egg-info/dependency_links.txt 2023-07-29T00:44:00,117 writing requirements to meeko.egg-info/requires.txt 2023-07-29T00:44:00,119 writing top-level names to meeko.egg-info/top_level.txt 2023-07-29T00:44:00,199 reading manifest file 'meeko.egg-info/SOURCES.txt' 2023-07-29T00:44:00,206 adding license file 'LICENSE' 2023-07-29T00:44:00,215 writing manifest file 'meeko.egg-info/SOURCES.txt' 2023-07-29T00:44:00,221 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'meeko.data' is absent from the `packages` configuration. 2023-07-29T00:44:00,221 !! 2023-07-29T00:44:00,222 ******************************************************************************** 2023-07-29T00:44:00,222 ############################ 2023-07-29T00:44:00,222 # Package would be ignored # 2023-07-29T00:44:00,223 ############################ 2023-07-29T00:44:00,223 Python recognizes 'meeko.data' as an importable package[^1], 2023-07-29T00:44:00,223 but it is absent from setuptools' `packages` configuration. 2023-07-29T00:44:00,224 This leads to an ambiguous overall configuration. If you want to distribute this 2023-07-29T00:44:00,224 package, please make sure that 'meeko.data' is explicitly added 2023-07-29T00:44:00,225 to the `packages` configuration field. 2023-07-29T00:44:00,225 Alternatively, you can also rely on setuptools' discovery methods 2023-07-29T00:44:00,226 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-07-29T00:44:00,226 instead of `find_packages(...)`/`find:`). 2023-07-29T00:44:00,227 You can read more about "package discovery" on setuptools documentation page: 2023-07-29T00:44:00,228 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-07-29T00:44:00,229 If you don't want 'meeko.data' to be distributed and are 2023-07-29T00:44:00,229 already explicitly excluding 'meeko.data' via 2023-07-29T00:44:00,230 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-07-29T00:44:00,230 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-07-29T00:44:00,230 combination with a more fine grained `package-data` configuration. 2023-07-29T00:44:00,231 You can read more about "package data files" on setuptools documentation page: 2023-07-29T00:44:00,232 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-07-29T00:44:00,233 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-07-29T00:44:00,234 even if it does not contain any `.py` files. 2023-07-29T00:44:00,234 On the other hand, currently there is no concept of package data 2023-07-29T00:44:00,235 directory, all directories are treated like packages. 2023-07-29T00:44:00,235 ******************************************************************************** 2023-07-29T00:44:00,236 !! 2023-07-29T00:44:00,236 check.warn(importable) 2023-07-29T00:44:00,237 creating build/lib/meeko/data 2023-07-29T00:44:00,237 copying meeko/data/atomtypes.txt -> build/lib/meeko/data 2023-07-29T00:44:00,238 copying meeko/data/flexres_templates.json -> build/lib/meeko/data 2023-07-29T00:44:00,238 copying meeko/data/pi_non_aromatic.txt -> build/lib/meeko/data 2023-07-29T00:44:00,242 copying meeko/data/residue_params.json -> build/lib/meeko/data 2023-07-29T00:44:00,263 copying meeko/data/waterfield.txt -> build/lib/meeko/data 2023-07-29T00:44:00,273 running build_scripts 2023-07-29T00:44:00,274 creating build/scripts-3.7 2023-07-29T00:44:00,276 copying and adjusting scripts/mk_prepare_ligand.py -> build/scripts-3.7 2023-07-29T00:44:00,282 copying and adjusting scripts/mk_prepare_receptor.py -> build/scripts-3.7 2023-07-29T00:44:00,288 copying and adjusting scripts/mk_export.py -> build/scripts-3.7 2023-07-29T00:44:00,291 changing mode of build/scripts-3.7/mk_prepare_ligand.py from 644 to 755 2023-07-29T00:44:00,292 changing mode of build/scripts-3.7/mk_prepare_receptor.py from 644 to 755 2023-07-29T00:44:00,293 changing mode of build/scripts-3.7/mk_export.py from 644 to 755 2023-07-29T00:44:00,369 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-07-29T00:44:00,370 !! 2023-07-29T00:44:00,371 ******************************************************************************** 2023-07-29T00:44:00,371 Please avoid running ``setup.py`` directly. 2023-07-29T00:44:00,371 Instead, use pypa/build, pypa/installer, pypa/build or 2023-07-29T00:44:00,372 other standards-based tools. 2023-07-29T00:44:00,372 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-07-29T00:44:00,373 ******************************************************************************** 2023-07-29T00:44:00,373 !! 2023-07-29T00:44:00,374 self.initialize_options() 2023-07-29T00:44:00,438 installing to build/bdist.linux-armv7l/wheel 2023-07-29T00:44:00,438 running install 2023-07-29T00:44:00,502 running install_lib 2023-07-29T00:44:00,573 creating build/bdist.linux-armv7l 2023-07-29T00:44:00,574 creating build/bdist.linux-armv7l/wheel 2023-07-29T00:44:00,578 creating build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,582 creating build/bdist.linux-armv7l/wheel/meeko/analysis 2023-07-29T00:44:00,584 copying build/lib/meeko/analysis/interactions.py -> build/bdist.linux-armv7l/wheel/meeko/analysis 2023-07-29T00:44:00,590 copying build/lib/meeko/analysis/fingerprint_interactions.py -> build/bdist.linux-armv7l/wheel/meeko/analysis 2023-07-29T00:44:00,594 copying build/lib/meeko/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/meeko/analysis 2023-07-29T00:44:00,598 copying build/lib/meeko/preparation.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,603 copying build/lib/meeko/macrocycle.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,608 creating build/bdist.linux-armv7l/wheel/meeko/data 2023-07-29T00:44:00,610 copying build/lib/meeko/data/flexres_templates.json -> build/bdist.linux-armv7l/wheel/meeko/data 2023-07-29T00:44:00,614 copying build/lib/meeko/data/atomtypes.txt -> build/bdist.linux-armv7l/wheel/meeko/data 2023-07-29T00:44:00,618 copying build/lib/meeko/data/residue_params.json -> build/bdist.linux-armv7l/wheel/meeko/data 2023-07-29T00:44:00,632 copying build/lib/meeko/data/waterfield.txt -> build/bdist.linux-armv7l/wheel/meeko/data 2023-07-29T00:44:00,636 copying build/lib/meeko/data/pi_non_aromatic.txt -> build/bdist.linux-armv7l/wheel/meeko/data 2023-07-29T00:44:00,640 copying build/lib/meeko/atomtyper.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,645 creating build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,647 copying build/lib/meeko/utils/covalent_radius_table.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,651 copying build/lib/meeko/utils/autodock4_atom_types_elements.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,654 copying build/lib/meeko/utils/geomutils.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,659 copying build/lib/meeko/utils/rdkitutils.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,663 copying build/lib/meeko/utils/utils.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,668 copying build/lib/meeko/utils/obutils.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,672 copying build/lib/meeko/utils/__init__.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,676 copying build/lib/meeko/utils/van_der_waals_radius_table.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,679 copying build/lib/meeko/utils/pdbutils.py -> build/bdist.linux-armv7l/wheel/meeko/utils 2023-07-29T00:44:00,683 copying build/lib/meeko/molecule_pdbqt.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,689 copying build/lib/meeko/rdkit_mol_create.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,694 copying build/lib/meeko/molsetup.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,700 copying build/lib/meeko/flexibility.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,704 copying build/lib/meeko/hydrate.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,709 copying build/lib/meeko/gridbox.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,713 copying build/lib/meeko/reactive.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,718 copying build/lib/meeko/covalentbuilder.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,722 copying build/lib/meeko/bondtyper.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,726 copying build/lib/meeko/writer.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,730 copying build/lib/meeko/__init__.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,734 copying build/lib/meeko/receptor_pdbqt.py -> build/bdist.linux-armv7l/wheel/meeko 2023-07-29T00:44:00,738 running install_data 2023-07-29T00:44:00,804 creating build/bdist.linux-armv7l/wheel/meeko-0.5.0.data 2023-07-29T00:44:00,805 creating build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data 2023-07-29T00:44:00,807 copying README.md -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data/ 2023-07-29T00:44:00,811 copying LICENSE -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data/ 2023-07-29T00:44:00,817 creating build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data/scripts 2023-07-29T00:44:00,818 copying scripts/mk_prepare_ligand.py -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data/scripts 2023-07-29T00:44:00,823 copying scripts/mk_export.py -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data/scripts 2023-07-29T00:44:00,827 copying scripts/mk_prepare_receptor.py -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/data/scripts 2023-07-29T00:44:00,831 running install_egg_info 2023-07-29T00:44:00,908 Copying meeko.egg-info to build/bdist.linux-armv7l/wheel/meeko-0.5.0-py3.7.egg-info 2023-07-29T00:44:00,933 running install_scripts 2023-07-29T00:44:00,935 creating build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts 2023-07-29T00:44:00,937 copying build/scripts-3.7/mk_prepare_ligand.py -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts 2023-07-29T00:44:00,942 copying build/scripts-3.7/mk_export.py -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts 2023-07-29T00:44:00,946 copying build/scripts-3.7/mk_prepare_receptor.py -> build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts 2023-07-29T00:44:00,951 changing mode of build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts/mk_prepare_ligand.py to 755 2023-07-29T00:44:00,952 changing mode of build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts/mk_export.py to 755 2023-07-29T00:44:00,952 changing mode of build/bdist.linux-armv7l/wheel/meeko-0.5.0.data/scripts/mk_prepare_receptor.py to 755 2023-07-29T00:44:00,992 creating build/bdist.linux-armv7l/wheel/meeko-0.5.0.dist-info/WHEEL 2023-07-29T00:44:00,998 creating '/tmp/pip-wheel-sv2vi352/meeko-0.5.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-29T00:44:01,004 adding 'meeko/__init__.py' 2023-07-29T00:44:01,010 adding 'meeko/atomtyper.py' 2023-07-29T00:44:01,014 adding 'meeko/bondtyper.py' 2023-07-29T00:44:01,019 adding 'meeko/covalentbuilder.py' 2023-07-29T00:44:01,024 adding 'meeko/flexibility.py' 2023-07-29T00:44:01,028 adding 'meeko/gridbox.py' 2023-07-29T00:44:01,033 adding 'meeko/hydrate.py' 2023-07-29T00:44:01,038 adding 'meeko/macrocycle.py' 2023-07-29T00:44:01,048 adding 'meeko/molecule_pdbqt.py' 2023-07-29T00:44:01,059 adding 'meeko/molsetup.py' 2023-07-29T00:44:01,064 adding 'meeko/preparation.py' 2023-07-29T00:44:01,070 adding 'meeko/rdkit_mol_create.py' 2023-07-29T00:44:01,075 adding 'meeko/reactive.py' 2023-07-29T00:44:01,082 adding 'meeko/receptor_pdbqt.py' 2023-07-29T00:44:01,087 adding 'meeko/writer.py' 2023-07-29T00:44:01,092 adding 'meeko/analysis/__init__.py' 2023-07-29T00:44:01,096 adding 'meeko/analysis/fingerprint_interactions.py' 2023-07-29T00:44:01,100 adding 'meeko/analysis/interactions.py' 2023-07-29T00:44:01,105 adding 'meeko/data/atomtypes.txt' 2023-07-29T00:44:01,109 adding 'meeko/data/flexres_templates.json' 2023-07-29T00:44:01,113 adding 'meeko/data/pi_non_aromatic.txt' 2023-07-29T00:44:01,139 adding 'meeko/data/residue_params.json' 2023-07-29T00:44:01,147 adding 'meeko/data/waterfield.txt' 2023-07-29T00:44:01,151 adding 'meeko/utils/__init__.py' 2023-07-29T00:44:01,155 adding 'meeko/utils/autodock4_atom_types_elements.py' 2023-07-29T00:44:01,158 adding 'meeko/utils/covalent_radius_table.py' 2023-07-29T00:44:01,164 adding 'meeko/utils/geomutils.py' 2023-07-29T00:44:01,169 adding 'meeko/utils/obutils.py' 2023-07-29T00:44:01,172 adding 'meeko/utils/pdbutils.py' 2023-07-29T00:44:01,176 adding 'meeko/utils/rdkitutils.py' 2023-07-29T00:44:01,182 adding 'meeko/utils/utils.py' 2023-07-29T00:44:01,185 adding 'meeko/utils/van_der_waals_radius_table.py' 2023-07-29T00:44:01,198 adding 'meeko-0.5.0.data/data/LICENSE' 2023-07-29T00:44:01,204 adding 'meeko-0.5.0.data/data/README.md' 2023-07-29T00:44:01,209 adding 'meeko-0.5.0.data/data/scripts/mk_export.py' 2023-07-29T00:44:01,216 adding 'meeko-0.5.0.data/data/scripts/mk_prepare_ligand.py' 2023-07-29T00:44:01,223 adding 'meeko-0.5.0.data/data/scripts/mk_prepare_receptor.py' 2023-07-29T00:44:01,228 adding 'meeko-0.5.0.data/scripts/mk_export.py' 2023-07-29T00:44:01,234 adding 'meeko-0.5.0.data/scripts/mk_prepare_ligand.py' 2023-07-29T00:44:01,242 adding 'meeko-0.5.0.data/scripts/mk_prepare_receptor.py' 2023-07-29T00:44:01,255 adding 'meeko-0.5.0.dist-info/LICENSE' 2023-07-29T00:44:01,260 adding 'meeko-0.5.0.dist-info/METADATA' 2023-07-29T00:44:01,263 adding 'meeko-0.5.0.dist-info/WHEEL' 2023-07-29T00:44:01,266 adding 'meeko-0.5.0.dist-info/top_level.txt' 2023-07-29T00:44:01,269 adding 'meeko-0.5.0.dist-info/RECORD' 2023-07-29T00:44:01,278 removing build/bdist.linux-armv7l/wheel 2023-07-29T00:44:01,460 Building wheel for meeko (setup.py): finished with status 'done' 2023-07-29T00:44:01,471 Created wheel for meeko: filename=meeko-0.5.0-py3-none-any.whl size=144408 sha256=716f47c9471895bb7314e06164f1748d2cb8f53987d8da9d52ec129b2c91cfc3 2023-07-29T00:44:01,473 Stored in directory: /tmp/pip-ephem-wheel-cache-sdplib1m/wheels/a6/28/3c/d8d6e8ef272148136c1d3e19e6d3bd86d9c3a323fad5d81bfa 2023-07-29T00:44:01,508 Successfully built meeko 2023-07-29T00:44:01,526 Removed build tracker: '/tmp/pip-build-tracker-h6ft8dws'