2023-07-29T19:32:38,064 Created temporary directory: /tmp/pip-build-tracker-_ivop_0e 2023-07-29T19:32:38,065 Initialized build tracking at /tmp/pip-build-tracker-_ivop_0e 2023-07-29T19:32:38,065 Created build tracker: /tmp/pip-build-tracker-_ivop_0e 2023-07-29T19:32:38,065 Entered build tracker: /tmp/pip-build-tracker-_ivop_0e 2023-07-29T19:32:38,066 Created temporary directory: /tmp/pip-wheel-t6wep7mq 2023-07-29T19:32:38,069 Created temporary directory: /tmp/pip-ephem-wheel-cache-m94uig2d 2023-07-29T19:32:38,092 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-29T19:32:38,095 2 location(s) to search for versions of superpang: 2023-07-29T19:32:38,095 * https://pypi.org/simple/superpang/ 2023-07-29T19:32:38,095 * https://www.piwheels.org/simple/superpang/ 2023-07-29T19:32:38,096 Fetching project page and analyzing links: https://pypi.org/simple/superpang/ 2023-07-29T19:32:38,096 Getting page https://pypi.org/simple/superpang/ 2023-07-29T19:32:38,098 Found index url https://pypi.org/simple/ 2023-07-29T19:32:38,157 Fetched page https://pypi.org/simple/superpang/ as application/vnd.pypi.simple.v1+json 2023-07-29T19:32:38,160 Found link https://files.pythonhosted.org/packages/9c/57/83a3974eb6f1728623e29d7fc3c5f3ccb0702c44d756e2b1f6f1b92798e1/SuperPang-0.7.0.post1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.7.0.post1 2023-07-29T19:32:38,161 Found link https://files.pythonhosted.org/packages/e8/23/ca26f8c2506d465d8b8383c1b8b60d052a2f86b58de691502e328dc925b0/SuperPang-0.8.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.8.0 2023-07-29T19:32:38,161 Found link https://files.pythonhosted.org/packages/4a/4f/ece0df30b902a9e6ff8d63632251d4c67ecd909cd7bde08a142d56a24880/SuperPang-0.8.1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.8.1 2023-07-29T19:32:38,162 Found link https://files.pythonhosted.org/packages/fc/fb/e92ac7479a7f8edb9864ece82b66104ad145015cc3abc02a4a37c60c4e32/SuperPang-0.9.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.0 2023-07-29T19:32:38,163 Found link https://files.pythonhosted.org/packages/fa/30/f59e38f3c4cde22e00716f8478fbcbe73d4e0b7c4ac11bf7354f4682794f/SuperPang-0.9.1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.1 2023-07-29T19:32:38,163 Found link https://files.pythonhosted.org/packages/7d/52/14b5e6e30655f1a4aa2fc6f1d66126075c5b8e9a204344f34ddf7f15300a/SuperPang-0.9.3.post1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.3.post1 2023-07-29T19:32:38,164 Found link https://files.pythonhosted.org/packages/36/82/bb9265ecfc16b64ed3851e8f46d6c63fe91763416f59cc1cc39bb1db03c3/SuperPang-0.9.4b1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.4b1 2023-07-29T19:32:38,164 Found link https://files.pythonhosted.org/packages/31/6c/17a442b028bf9c3e55011670d5d787513bcd761172b94bee703eeac53c77/SuperPang-0.9.4.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.4 2023-07-29T19:32:38,165 Found link https://files.pythonhosted.org/packages/c1/54/331e16a3c04b5e29d33ab3b4a2ca0e0f2eea68cc545f325f4181c41c3009/SuperPang-0.9.5.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.5 2023-07-29T19:32:38,165 Found link https://files.pythonhosted.org/packages/48/8e/57bc26eee0cbc2b81934e0b0b949baa13ceb6f906b5c0fd950a905ba7426/SuperPang-0.9.6.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.6 2023-07-29T19:32:38,166 Found link https://files.pythonhosted.org/packages/4e/d1/6bd16f697e9c2bd174a907232f8b347fcb6e69c4cb0cb43e33da93e59ba9/SuperPang-1.0.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.0.0 2023-07-29T19:32:38,166 Found link https://files.pythonhosted.org/packages/d9/37/086028f99bbf4c6bb484cf19d8afc1c1dcc994838051a2735535007edd7d/SuperPang-1.1.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.1.0 2023-07-29T19:32:38,167 Found link https://files.pythonhosted.org/packages/76/72/0f49b3c52d5c0b65291481efc7dad0d0de90ce91d6ef311dae6c697731bf/SuperPang-1.1.0.post1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.1.0.post1 2023-07-29T19:32:38,168 Fetching project page and analyzing links: https://www.piwheels.org/simple/superpang/ 2023-07-29T19:32:38,168 Getting page https://www.piwheels.org/simple/superpang/ 2023-07-29T19:32:38,169 Found index url https://www.piwheels.org/simple/ 2023-07-29T19:32:38,325 Fetched page https://www.piwheels.org/simple/superpang/ as text/html 2023-07-29T19:32:38,327 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-0.7.0.post1-py3-none-any.whl#sha256=7b5427f75343e311a397b472cfed232b2549783866aa715ac6cee45857734501 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-07-29T19:32:38,327 Skipping link: not a file: https://www.piwheels.org/simple/superpang/ 2023-07-29T19:32:38,327 Skipping link: not a file: https://pypi.org/simple/superpang/ 2023-07-29T19:32:38,346 Given no hashes to check 1 links for project 'superpang': discarding no candidates 2023-07-29T19:32:38,363 Collecting superpang==1.1.0.post1 2023-07-29T19:32:38,365 Created temporary directory: /tmp/pip-unpack-wzlj2n0l 2023-07-29T19:32:38,754 Downloading SuperPang-1.1.0.post1.tar.gz (6.2 MB) 2023-07-29T19:32:40,584 Added superpang==1.1.0.post1 from https://files.pythonhosted.org/packages/76/72/0f49b3c52d5c0b65291481efc7dad0d0de90ce91d6ef311dae6c697731bf/SuperPang-1.1.0.post1.tar.gz to build tracker '/tmp/pip-build-tracker-_ivop_0e' 2023-07-29T19:32:40,591 Created temporary directory: /tmp/pip-build-env-yesu02px 2023-07-29T19:32:40,601 Installing build dependencies: started 2023-07-29T19:32:40,602 Running command pip subprocess to install build dependencies 2023-07-29T19:32:41,761 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-29T19:32:42,124 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-29T19:32:43,784 Collecting setuptools>=61.0 2023-07-29T19:32:43,855 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-07-29T19:32:45,106 Collecting numpy 2023-07-29T19:32:45,975 Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.1-cp39-cp39-linux_armv7l.whl (12.5 MB) 2023-07-29T19:32:47,848 Collecting cython 2023-07-29T19:32:48,603 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.0-cp39-cp39-linux_armv7l.whl (10.6 MB) 2023-07-29T19:32:50,670 Installing collected packages: setuptools, numpy, cython 2023-07-29T19:33:01,219 Creating /tmp/pip-build-env-yesu02px/overlay/bin 2023-07-29T19:33:01,221 changing mode of /tmp/pip-build-env-yesu02px/overlay/bin/f2py to 755 2023-07-29T19:33:01,224 changing mode of /tmp/pip-build-env-yesu02px/overlay/bin/f2py3 to 755 2023-07-29T19:33:01,227 changing mode of /tmp/pip-build-env-yesu02px/overlay/bin/f2py3.9 to 755 2023-07-29T19:33:04,610 changing mode of /tmp/pip-build-env-yesu02px/overlay/bin/cygdb to 755 2023-07-29T19:33:04,612 changing mode of /tmp/pip-build-env-yesu02px/overlay/bin/cython to 755 2023-07-29T19:33:04,614 changing mode of /tmp/pip-build-env-yesu02px/overlay/bin/cythonize to 755 2023-07-29T19:33:04,638 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2023-07-29T19:33:04,638 scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.1 which is incompatible. 2023-07-29T19:33:04,638 Successfully installed cython-3.0.0 numpy-1.25.1 setuptools-68.0.0 2023-07-29T19:33:04,651 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-07-29T19:33:04,651 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-29T19:33:05,022 Installing build dependencies: finished with status 'done' 2023-07-29T19:33:05,027 Getting requirements to build wheel: started 2023-07-29T19:33:05,028 Running command Getting requirements to build wheel 2023-07-29T19:33:05,872 Getting requirements to build wheel: finished with status 'done' 2023-07-29T19:33:05,888 Installing backend dependencies: started 2023-07-29T19:33:05,889 Running command pip subprocess to install backend dependencies 2023-07-29T19:33:07,052 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-07-29T19:33:07,414 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-07-29T19:33:07,854 Collecting wheel 2023-07-29T19:33:07,872 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.0-py3-none-any.whl (64 kB) 2023-07-29T19:33:09,345 Installing collected packages: wheel 2023-07-29T19:33:09,576 Creating /tmp/pip-build-env-yesu02px/normal/bin 2023-07-29T19:33:09,578 changing mode of /tmp/pip-build-env-yesu02px/normal/bin/wheel to 755 2023-07-29T19:33:09,591 Successfully installed wheel-0.41.0 2023-07-29T19:33:09,604 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-07-29T19:33:09,604 [notice] To update, run: python3 -m pip install --upgrade pip 2023-07-29T19:33:09,808 Installing backend dependencies: finished with status 'done' 2023-07-29T19:33:09,811 Created temporary directory: /tmp/pip-modern-metadata-8ej06hl2 2023-07-29T19:33:09,813 Preparing metadata (pyproject.toml): started 2023-07-29T19:33:09,814 Running command Preparing metadata (pyproject.toml) 2023-07-29T19:33:10,560 /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-07-29T19:33:10,561 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-07-29T19:33:11,038 running dist_info 2023-07-29T19:33:11,070 creating /tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info 2023-07-29T19:33:11,075 writing /tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/PKG-INFO 2023-07-29T19:33:11,078 writing dependency_links to /tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/dependency_links.txt 2023-07-29T19:33:11,080 writing entry points to /tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/entry_points.txt 2023-07-29T19:33:11,082 writing requirements to /tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/requires.txt 2023-07-29T19:33:11,083 writing top-level names to /tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/top_level.txt 2023-07-29T19:33:11,084 writing manifest file '/tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/SOURCES.txt' 2023-07-29T19:33:11,112 reading manifest file '/tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/SOURCES.txt' 2023-07-29T19:33:11,114 reading manifest template 'MANIFEST.in' 2023-07-29T19:33:11,116 adding license file 'LICENSE' 2023-07-29T19:33:11,118 writing manifest file '/tmp/pip-modern-metadata-8ej06hl2/SuperPang.egg-info/SOURCES.txt' 2023-07-29T19:33:11,120 creating '/tmp/pip-modern-metadata-8ej06hl2/SuperPang-1.1.0.post1.dist-info' 2023-07-29T19:33:11,289 Preparing metadata (pyproject.toml): finished with status 'done' 2023-07-29T19:33:11,296 Source in /tmp/pip-wheel-t6wep7mq/superpang_96c91bb781f9476097a38b04f8e17347 has version 1.1.0.post1, which satisfies requirement superpang==1.1.0.post1 from https://files.pythonhosted.org/packages/76/72/0f49b3c52d5c0b65291481efc7dad0d0de90ce91d6ef311dae6c697731bf/SuperPang-1.1.0.post1.tar.gz 2023-07-29T19:33:11,297 Removed superpang==1.1.0.post1 from https://files.pythonhosted.org/packages/76/72/0f49b3c52d5c0b65291481efc7dad0d0de90ce91d6ef311dae6c697731bf/SuperPang-1.1.0.post1.tar.gz from build tracker '/tmp/pip-build-tracker-_ivop_0e' 2023-07-29T19:33:11,303 Created temporary directory: /tmp/pip-unpack-y_wuycxk 2023-07-29T19:33:11,304 Building wheels for collected packages: superpang 2023-07-29T19:33:11,310 Created temporary directory: /tmp/pip-wheel-qvvdicvr 2023-07-29T19:33:11,310 Destination directory: /tmp/pip-wheel-qvvdicvr 2023-07-29T19:33:11,312 Building wheel for superpang (pyproject.toml): started 2023-07-29T19:33:11,313 Running command Building wheel for superpang (pyproject.toml) 2023-07-29T19:33:12,048 /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-07-29T19:33:12,049 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-07-29T19:33:12,499 running bdist_wheel 2023-07-29T19:33:12,543 running build 2023-07-29T19:33:12,544 running build_py 2023-07-29T19:33:12,549 creating build 2023-07-29T19:33:12,550 creating build/lib.linux-armv7l-cpython-39 2023-07-29T19:33:12,551 creating build/lib.linux-armv7l-cpython-39/superpang 2023-07-29T19:33:12,552 copying src/superpang/__init__.py -> build/lib.linux-armv7l-cpython-39/superpang 2023-07-29T19:33:12,555 creating build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,555 copying src/superpang/scripts/test-SuperPang.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,558 copying src/superpang/scripts/SuperPang.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,560 copying src/superpang/scripts/__init__.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,562 copying src/superpang/scripts/condense-edges.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,564 copying src/superpang/scripts/test_SuperPang.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,566 copying src/superpang/scripts/homogenize.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-07-29T19:33:12,569 creating build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,570 copying src/superpang/lib/Assembler.py -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,574 copying src/superpang/lib/__init__.py -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,575 copying src/superpang/lib/utils.py -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,576 running egg_info 2023-07-29T19:33:12,587 writing src/SuperPang.egg-info/PKG-INFO 2023-07-29T19:33:12,589 writing dependency_links to src/SuperPang.egg-info/dependency_links.txt 2023-07-29T19:33:12,592 writing entry points to src/SuperPang.egg-info/entry_points.txt 2023-07-29T19:33:12,593 writing requirements to src/SuperPang.egg-info/requires.txt 2023-07-29T19:33:12,595 writing top-level names to src/SuperPang.egg-info/top_level.txt 2023-07-29T19:33:12,607 reading manifest file 'src/SuperPang.egg-info/SOURCES.txt' 2023-07-29T19:33:12,610 reading manifest template 'MANIFEST.in' 2023-07-29T19:33:12,612 adding license file 'LICENSE' 2023-07-29T19:33:12,615 writing manifest file 'src/SuperPang.egg-info/SOURCES.txt' 2023-07-29T19:33:12,620 copying src/superpang/VERSION -> build/lib.linux-armv7l-cpython-39/superpang 2023-07-29T19:33:12,622 creating build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,623 copying src/superpang/test_data/2636415981.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,671 copying src/superpang/test_data/2636416036.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,718 copying src/superpang/test_data/2636416061.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,757 copying src/superpang/test_data/2636416062.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,794 copying src/superpang/test_data/2639762512.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,830 copying src/superpang/test_data/2639762514.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,864 copying src/superpang/test_data/2639762515.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,900 copying src/superpang/test_data/2639762516.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,937 copying src/superpang/test_data/2844342787.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-07-29T19:33:12,975 copying src/superpang/lib/Compressor.pyx -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,977 copying src/superpang/lib/cutils.pyx -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,980 copying src/superpang/lib/vtools.pyx -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-07-29T19:33:12,984 running build_ext 2023-07-29T19:33:17,203 Compiling src/superpang/lib/Compressor.pyx because it changed. 2023-07-29T19:33:17,203 [1/1] Cythonizing src/superpang/lib/Compressor.pyx 2023-07-29T19:33:17,204 building 'superpang.lib.Compressor' extension 2023-07-29T19:33:17,205 creating build/temp.linux-armv7l-cpython-39 2023-07-29T19:33:17,205 creating build/temp.linux-armv7l-cpython-39/src 2023-07-29T19:33:17,206 creating build/temp.linux-armv7l-cpython-39/src/superpang 2023-07-29T19:33:17,207 creating build/temp.linux-armv7l-cpython-39/src/superpang/lib 2023-07-29T19:33:17,208 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/superpang/lib/Compressor.c -o build/temp.linux-armv7l-cpython-39/src/superpang/lib/Compressor.o 2023-07-29T19:33:17,570 In file included from /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2023-07-29T19:33:17,570 from /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-07-29T19:33:17,570 from /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-07-29T19:33:17,570 from src/superpang/lib/Compressor.c:1106: 2023-07-29T19:33:17,570 /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-07-29T19:33:17,571 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-07-29T19:33:17,571 | ^~~~~~~ 2023-07-29T19:33:38,698 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/superpang/lib/Compressor.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/superpang/lib/Compressor.cpython-39-arm-linux-gnueabihf.so 2023-07-29T19:33:41,205 Compiling src/superpang/lib/cutils.pyx because it changed. 2023-07-29T19:33:41,206 [1/1] Cythonizing src/superpang/lib/cutils.pyx 2023-07-29T19:33:41,206 building 'superpang.lib.cutils' extension 2023-07-29T19:33:41,207 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/superpang/lib/cutils.c -o build/temp.linux-armv7l-cpython-39/src/superpang/lib/cutils.o 2023-07-29T19:34:01,337 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/superpang/lib/cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/superpang/lib/cutils.cpython-39-arm-linux-gnueabihf.so 2023-07-29T19:34:04,088 Compiling src/superpang/lib/vtools.pyx because it changed. 2023-07-29T19:34:04,088 [1/1] Cythonizing src/superpang/lib/vtools.pyx 2023-07-29T19:34:04,088 building 'superpang.lib.vtools' extension 2023-07-29T19:34:04,089 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/superpang/lib/vtools.c -o build/temp.linux-armv7l-cpython-39/src/superpang/lib/vtools.o 2023-07-29T19:34:04,416 In file included from /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2023-07-29T19:34:04,417 from /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-07-29T19:34:04,417 from /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-07-29T19:34:04,417 from src/superpang/lib/vtools.c:1106: 2023-07-29T19:34:04,417 /tmp/pip-build-env-yesu02px/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-07-29T19:34:04,417 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-07-29T19:34:04,418 | ^~~~~~~ 2023-07-29T19:34:23,692 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/superpang/lib/vtools.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/superpang/lib/vtools.cpython-39-arm-linux-gnueabihf.so 2023-07-29T19:34:23,858 installing to build/bdist.linux-armv7l/wheel 2023-07-29T19:34:23,858 running install 2023-07-29T19:34:23,885 running install_lib 2023-07-29T19:34:23,891 creating build/bdist.linux-armv7l 2023-07-29T19:34:23,891 creating build/bdist.linux-armv7l/wheel 2023-07-29T19:34:23,893 creating build/bdist.linux-armv7l/wheel/superpang 2023-07-29T19:34:23,894 copying build/lib.linux-armv7l-cpython-39/superpang/VERSION -> build/bdist.linux-armv7l/wheel/superpang 2023-07-29T19:34:23,896 creating build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,897 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/test-SuperPang.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,898 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/SuperPang.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,901 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,902 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/condense-edges.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,904 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/test_SuperPang.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,906 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/homogenize.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-07-29T19:34:23,908 copying build/lib.linux-armv7l-cpython-39/superpang/__init__.py -> build/bdist.linux-armv7l/wheel/superpang 2023-07-29T19:34:23,910 creating build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:23,911 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762515.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:23,955 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636416061.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,001 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762512.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,035 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762516.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,076 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636415981.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,116 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636416036.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,160 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762514.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,209 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2844342787.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,252 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636416062.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-07-29T19:34:24,291 creating build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,292 copying build/lib.linux-armv7l-cpython-39/superpang/lib/cutils.pyx -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,295 copying build/lib.linux-armv7l-cpython-39/superpang/lib/Compressor.pyx -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,297 copying build/lib.linux-armv7l-cpython-39/superpang/lib/vtools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,320 copying build/lib.linux-armv7l-cpython-39/superpang/lib/Assembler.py -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,323 copying build/lib.linux-armv7l-cpython-39/superpang/lib/vtools.pyx -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,325 copying build/lib.linux-armv7l-cpython-39/superpang/lib/__init__.py -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,327 copying build/lib.linux-armv7l-cpython-39/superpang/lib/cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,342 copying build/lib.linux-armv7l-cpython-39/superpang/lib/Compressor.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,362 copying build/lib.linux-armv7l-cpython-39/superpang/lib/utils.py -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-07-29T19:34:24,364 running install_egg_info 2023-07-29T19:34:24,371 Copying src/SuperPang.egg-info to build/bdist.linux-armv7l/wheel/SuperPang-1.1.0.post1-py3.9.egg-info 2023-07-29T19:34:24,384 running install_scripts 2023-07-29T19:34:24,436 creating build/bdist.linux-armv7l/wheel/SuperPang-1.1.0.post1.dist-info/WHEEL 2023-07-29T19:34:24,440 creating '/tmp/pip-wheel-qvvdicvr/.tmp-gm2sxo7a/SuperPang-1.1.0.post1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-07-29T19:34:24,444 adding 'superpang/VERSION' 2023-07-29T19:34:24,445 adding 'superpang/__init__.py' 2023-07-29T19:34:24,454 adding 'superpang/lib/Assembler.py' 2023-07-29T19:34:24,658 adding 'superpang/lib/Compressor.cpython-39-arm-linux-gnueabihf.so' 2023-07-29T19:34:24,666 adding 'superpang/lib/Compressor.pyx' 2023-07-29T19:34:24,667 adding 'superpang/lib/__init__.py' 2023-07-29T19:34:24,869 adding 'superpang/lib/cutils.cpython-39-arm-linux-gnueabihf.so' 2023-07-29T19:34:24,877 adding 'superpang/lib/cutils.pyx' 2023-07-29T19:34:24,879 adding 'superpang/lib/utils.py' 2023-07-29T19:34:25,076 adding 'superpang/lib/vtools.cpython-39-arm-linux-gnueabihf.so' 2023-07-29T19:34:25,084 adding 'superpang/lib/vtools.pyx' 2023-07-29T19:34:25,088 adding 'superpang/scripts/SuperPang.py' 2023-07-29T19:34:25,089 adding 'superpang/scripts/__init__.py' 2023-07-29T19:34:25,092 adding 'superpang/scripts/condense-edges.py' 2023-07-29T19:34:25,094 adding 'superpang/scripts/homogenize.py' 2023-07-29T19:34:25,096 adding 'superpang/scripts/test-SuperPang.py' 2023-07-29T19:34:25,098 adding 'superpang/scripts/test_SuperPang.py' 2023-07-29T19:34:26,411 adding 'superpang/test_data/2636415981.fna' 2023-07-29T19:34:27,640 adding 'superpang/test_data/2636416036.fna' 2023-07-29T19:34:28,881 adding 'superpang/test_data/2636416061.fna' 2023-07-29T19:34:30,193 adding 'superpang/test_data/2636416062.fna' 2023-07-29T19:34:31,397 adding 'superpang/test_data/2639762512.fna' 2023-07-29T19:34:32,587 adding 'superpang/test_data/2639762514.fna' 2023-07-29T19:34:33,853 adding 'superpang/test_data/2639762515.fna' 2023-07-29T19:34:35,056 adding 'superpang/test_data/2639762516.fna' 2023-07-29T19:34:36,261 adding 'superpang/test_data/2844342787.fna' 2023-07-29T19:34:36,276 adding 'SuperPang-1.1.0.post1.dist-info/LICENSE' 2023-07-29T19:34:36,278 adding 'SuperPang-1.1.0.post1.dist-info/METADATA' 2023-07-29T19:34:36,279 adding 'SuperPang-1.1.0.post1.dist-info/WHEEL' 2023-07-29T19:34:36,280 adding 'SuperPang-1.1.0.post1.dist-info/entry_points.txt' 2023-07-29T19:34:36,282 adding 'SuperPang-1.1.0.post1.dist-info/top_level.txt' 2023-07-29T19:34:36,283 adding 'SuperPang-1.1.0.post1.dist-info/RECORD' 2023-07-29T19:34:36,369 removing build/bdist.linux-armv7l/wheel 2023-07-29T19:34:37,073 Building wheel for superpang (pyproject.toml): finished with status 'done' 2023-07-29T19:34:37,233 Created wheel for superpang: filename=SuperPang-1.1.0.post1-cp39-cp39-linux_armv7l.whl size=7483663 sha256=350f22e98807e29abd133ce5d877b31a3fc3d59ae687fa6d821a4283a79d7933 2023-07-29T19:34:37,234 Stored in directory: /tmp/pip-ephem-wheel-cache-m94uig2d/wheels/9d/91/9c/317feade3ec8178fbc8a39281b0ab3b1ce57c6109a5c14f23d 2023-07-29T19:34:37,250 Successfully built superpang 2023-07-29T19:34:37,422 Removed build tracker: '/tmp/pip-build-tracker-_ivop_0e'