2023-07-31T12:52:01,506 Created temporary directory: /tmp/pip-build-tracker-h0or316q
2023-07-31T12:52:01,507 Initialized build tracking at /tmp/pip-build-tracker-h0or316q
2023-07-31T12:52:01,507 Created build tracker: /tmp/pip-build-tracker-h0or316q
2023-07-31T12:52:01,507 Entered build tracker: /tmp/pip-build-tracker-h0or316q
2023-07-31T12:52:01,508 Created temporary directory: /tmp/pip-wheel-ci6re5d8
2023-07-31T12:52:01,511 Created temporary directory: /tmp/pip-ephem-wheel-cache-02t156h_
2023-07-31T12:52:01,536 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-07-31T12:52:01,539 2 location(s) to search for versions of moleculekit:
2023-07-31T12:52:01,539 * https://pypi.org/simple/moleculekit/
2023-07-31T12:52:01,539 * https://www.piwheels.org/simple/moleculekit/
2023-07-31T12:52:01,540 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-07-31T12:52:01,540 Getting page https://pypi.org/simple/moleculekit/
2023-07-31T12:52:01,542 Found index url https://pypi.org/simple/
2023-07-31T12:52:01,595 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-07-31T12:52:01,631   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,631   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-07-31T12:52:01,632   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,632   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-07-31T12:52:01,632   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,632   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-07-31T12:52:01,633   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,633   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-07-31T12:52:01,633   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,633   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-07-31T12:52:01,634   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,634   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-07-31T12:52:01,634   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,634   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-07-31T12:52:01,635   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,635   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-07-31T12:52:01,635   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,635   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-07-31T12:52:01,636   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,636   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-07-31T12:52:01,636   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,636   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-07-31T12:52:01,637   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,637   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-07-31T12:52:01,637   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,637   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-07-31T12:52:01,638   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,638   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-07-31T12:52:01,638   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,638   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-07-31T12:52:01,639   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,639   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-07-31T12:52:01,639   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,639   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-07-31T12:52:01,639   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,640   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-07-31T12:52:01,640   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,640   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-07-31T12:52:01,640   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,641   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-07-31T12:52:01,641   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,641   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-07-31T12:52:01,641   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,642   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-07-31T12:52:01,642   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,642   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-07-31T12:52:01,642   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,643   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-07-31T12:52:01,643   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,643   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-07-31T12:52:01,643   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,643   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-07-31T12:52:01,644   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,644   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-07-31T12:52:01,644   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,644   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-07-31T12:52:01,645   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,645   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-07-31T12:52:01,645   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,645   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-07-31T12:52:01,646   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,646   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-07-31T12:52:01,646   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,646   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-07-31T12:52:01,647   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-07-31T12:52:01,647   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
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2023-07-31T12:52:01,664   Found link https://files.pythonhosted.org/packages/5c/b2/944d529319db190e13234dd2337bff23b7a7c3c1a98b2a95eb08fc802530/moleculekit-0.9.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.7
2023-07-31T12:52:01,665   Found link https://files.pythonhosted.org/packages/42/0a/fbfa3d5c838ad716fdcb9b5ad55bddb6dccd74c5c281ac171be93b0f58e2/moleculekit-0.9.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.8
2023-07-31T12:52:01,665   Found link https://files.pythonhosted.org/packages/15/e0/93b4cc5e997a9e4e01fd39f00548f04e3f068961abba30f82fc04aa828ac/moleculekit-0.9.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.9
2023-07-31T12:52:01,665   Found link https://files.pythonhosted.org/packages/7f/58/2f04c5387c3c23e5c46f71741f7655c380b01c6f88aad7b5e945943c3fd1/moleculekit-0.9.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.12
2023-07-31T12:52:01,666   Found link https://files.pythonhosted.org/packages/b5/7c/fde4b7b8c9cd6683036e87727f341a0c9de5dae09f324dfa1bc2aa2a6de0/moleculekit-0.9.13.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.13
2023-07-31T12:52:01,666   Found link https://files.pythonhosted.org/packages/8e/f7/39a1290893da55d759e629ea6d9e2509fe6c3a06538d3f80cca590859647/moleculekit-0.9.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.14
2023-07-31T12:52:01,666   Found link https://files.pythonhosted.org/packages/02/6e/108b002ecb68c789d690492a02ced311cea625fdd642348e5cd75bd25fdb/moleculekit-0.9.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.15
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2023-07-31T12:52:01,667   Found link https://files.pythonhosted.org/packages/19/73/98bfd38e7d5823dc1d21ca3557d9f599b09926d252b22e215688677fe1eb/moleculekit-1.0.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.0
2023-07-31T12:52:01,667   Found link https://files.pythonhosted.org/packages/fc/d7/f3aa2dd40f165c1b67401587414deb33e80764835dfe2abb16b9b1d167bf/moleculekit-1.0.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.1
2023-07-31T12:52:01,667   Found link https://files.pythonhosted.org/packages/19/54/5ec72761331cfeea3e48a65f0dc30f7c21ec586f6d2b904339c262abafd8/moleculekit-1.0.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.2
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2023-07-31T12:52:01,668   Found link https://files.pythonhosted.org/packages/28/2f/61d6e171e7b0309a94b3920b2743e5b6990d24a4870a5b1caf39f0e34338/moleculekit-1.0.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.6
2023-07-31T12:52:01,669   Found link https://files.pythonhosted.org/packages/6d/1e/bbd2d882b353e673f44897179ab0b6e76df9c2a657d25d47090dbdce76d3/moleculekit-1.0.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.7
2023-07-31T12:52:01,669   Found link https://files.pythonhosted.org/packages/61/45/acbe2272378c87f0796b1ebcba0673a13acc5ed87eb0d29fa16e1bfe54cf/moleculekit-1.0.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.8
2023-07-31T12:52:01,669   Found link https://files.pythonhosted.org/packages/72/48/3df4bcf3a3e5ca9c0e05e5486c0a7da3b7d6b3ff49830d473b6e72f02443/moleculekit-1.0.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.9
2023-07-31T12:52:01,670   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
2023-07-31T12:52:01,670   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
2023-07-31T12:52:01,670   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2023-07-31T12:52:01,670   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
2023-07-31T12:52:01,671   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2023-07-31T12:52:01,671   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2023-07-31T12:52:01,671   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-07-31T12:52:01,671   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-07-31T12:52:01,672   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-07-31T12:52:01,672   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2023-07-31T12:52:01,672   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2023-07-31T12:52:01,673   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2023-07-31T12:52:01,673   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2023-07-31T12:52:01,673   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-07-31T12:52:01,673   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-07-31T12:52:01,674   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-07-31T12:52:01,674   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2023-07-31T12:52:01,674   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
2023-07-31T12:52:01,674   Found link https://files.pythonhosted.org/packages/f9/f6/5808fddfaeeb3c021514c45f1b896329245c2e1c6218a86b9bc9f1904d7d/moleculekit-1.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.3
2023-07-31T12:52:01,675   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
2023-07-31T12:52:01,675   Found link https://files.pythonhosted.org/packages/0b/c2/d5b36c664c2d4f8736b5dbf06b05d9efeeacd4d488125c8feb0e4efb3594/moleculekit-1.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.5
2023-07-31T12:52:01,675   Found link https://files.pythonhosted.org/packages/30/3d/7f0577f2f4fd87df9160c6c80c49fe7d025f40b9f25c6b6d9ed0bcd2341f/moleculekit-1.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.7
2023-07-31T12:52:01,675   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2023-07-31T12:52:01,676   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2023-07-31T12:52:01,676   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2023-07-31T12:52:01,676   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
2023-07-31T12:52:01,676   Found link https://files.pythonhosted.org/packages/21/ce/d98ddf9106565632f876b1b853bb23c64534e65884b9d3d73208c7fe17e6/moleculekit-1.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.2
2023-07-31T12:52:01,677   Found link https://files.pythonhosted.org/packages/f9/12/68450058da1b4f39328ce41f22cfb5a38717147b3e624cb76b225318dd96/moleculekit-1.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.3
2023-07-31T12:52:01,677   Found link https://files.pythonhosted.org/packages/a1/9c/61a877e38393372a16746096dc836e3a24d0fe31240644258396f6ec1dd5/moleculekit-1.4.5-1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.5-1
2023-07-31T12:52:01,678   Found link https://files.pythonhosted.org/packages/65/2b/f8fbac2b196d899066e4d26b78e62adc1f2356734b3de63da153e9b18e44/moleculekit-1.4.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.6
2023-07-31T12:52:01,678   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
2023-07-31T12:52:01,679   Found link https://files.pythonhosted.org/packages/91/bd/4e692bc271e6a957732a20347e43f0388e12ab60df6717a178b628f18fce/moleculekit-1.4.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.8
2023-07-31T12:52:01,679   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2023-07-31T12:52:01,680   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2023-07-31T12:52:01,681   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
2023-07-31T12:52:01,681   Found link https://files.pythonhosted.org/packages/3d/18/e249854f20e449b9890eca08ef37ccdb87f719b6ac0db8e9d2ca9c4eb890/moleculekit-1.5.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.2
2023-07-31T12:52:01,682   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2023-07-31T12:52:01,682   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2023-07-31T12:52:01,683   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2023-07-31T12:52:01,683   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2023-07-31T12:52:01,684   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
2023-07-31T12:52:01,684   Found link https://files.pythonhosted.org/packages/5e/4a/8e20ee9556cfcdc8c51aac44a054b76db1b9abf8c83124f51521397f7673/moleculekit-1.5.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.8
2023-07-31T12:52:01,685   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
2023-07-31T12:52:01,685   Found link https://files.pythonhosted.org/packages/c2/66/b802cbaa73639d3fb24d7aca0a21b932bd6b781103c3aa0662fd27dd64e0/moleculekit-1.6.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.1
2023-07-31T12:52:01,686   Found link https://files.pythonhosted.org/packages/01/31/1debf4b7c89e0060dc1f7d19ab348e627b9183890a8e443c1ee54ee3bd6c/moleculekit-1.6.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.4
2023-07-31T12:52:01,687   Found link https://files.pythonhosted.org/packages/d6/3a/77427acaba2c2b4670a4b94ce5cd161b60ac547e812a6337374265f3272d/moleculekit-1.6.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.5
2023-07-31T12:52:01,687   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
2023-07-31T12:52:01,688   Found link https://files.pythonhosted.org/packages/b0/eb/47f199ab494f4a3929e1265222e24dcfce4dc2dde54923d1be8e513bf765/moleculekit-1.6.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.7
2023-07-31T12:52:01,688   Found link https://files.pythonhosted.org/packages/02/62/8710bf8c331f6c5d3320bcd99ce1f53fd72c8ed39767e69fe09127926c58/moleculekit-1.6.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.8
2023-07-31T12:52:01,689   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
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2023-07-31T12:52:01,690   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2023-07-31T12:52:01,690   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-07-31T12:52:01,691   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2023-07-31T12:52:01,692   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2023-07-31T12:52:01,692   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2023-07-31T12:52:01,693   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2023-07-31T12:52:01,693 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-07-31T12:52:01,693 Getting page https://www.piwheels.org/simple/moleculekit/
2023-07-31T12:52:01,694 Found index url https://www.piwheels.org/simple/
2023-07-31T12:52:01,868 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
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2023-07-31T12:52:01,927   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.8-cp39-cp39-linux_armv7l.whl#sha256=adf9e24a2a038ae1611fe2ce4e6227c0f55096c8e4b3796e7bdfaf860ef31752 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-07-31T12:52:01,931   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.6-cp39-cp39-linux_armv7l.whl#sha256=c81af8eb30e31f41a57d6e31c2e4d4a5a6f85041fe9f79dcd843adf62c919a7a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-07-31T12:52:01,932   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv7l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,932   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv6l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,932   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv7l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,932   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv6l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,932   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv7l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,933   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv6l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,933   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv7l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,933   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv6l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,933   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,933   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv6l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,934   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,934   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv6l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,934   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,934   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,934   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,934   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,935   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,935   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,935   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,935   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,935   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,936   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,936   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,936   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,936   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,936   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,937   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,937   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,937   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,937   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,937   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,937   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,938   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,938   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,938   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,938   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,938   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,939   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,939   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,939   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,939   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,939   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,940   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,940   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,940   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,940   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,940   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,941   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,941   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,941   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,941   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,941   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,941   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,942   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,942   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,942   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,942   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,942   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,943   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,943   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,943   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,943   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,943   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,943   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,944   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,944   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,944   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,944   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,944   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,945   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,945   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,945   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,945   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,945   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,946   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,946   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,946   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,946   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,946   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,947   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,947   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,947   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,947   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,947   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,947   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,948   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,948   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,948   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,948   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,948   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,949   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,949   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,949   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv7l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,949   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv6l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,949   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv7l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,950   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv6l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,950   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv7l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,950   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv6l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,950   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv7l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,950   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv6l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,950   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv7l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,951   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv6l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,951   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv7l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,951   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv6l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,951   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv7l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,951   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv6l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,952   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv7l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,952   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv6l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,952   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.4-py3-none-any.whl#sha256=9ea33917985ebf7bdfdbb276c83c4b2b1be17adbefb6062cc28c7ac037e3fab8 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,952   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.3-py3-none-any.whl#sha256=60b48ad38d8567be173c2a4a384dd7d742cf0b9f80eac5510c5987a9e1b668b6 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,952   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.2-py3-none-any.whl#sha256=89c944d279cde5c1d1ea898c4495e8076b1a1c477f1594f024110adcb137070e (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,953   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.8-py3-none-any.whl#sha256=9f728761688514ebb5e7fbd00f93960d862d928411f697f3beaf5c05b55bcd29 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,953   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.7-py3-none-any.whl#sha256=0167204d0c1ad4269753d9981920d6d47d0936fa85f5a709716abe11f2f63924 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,953   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.6-py3-none-any.whl#sha256=aa0c660454f157d45a5709a2fe3ec7e6c79af7be1dc5866ab3497475f2197d8d (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,953   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.4-py3-none-any.whl#sha256=328348766e2960fdf270fdf395fcb1b60acc7f8741927b76535453e8f3731f03 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,953   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.3-py3-none-any.whl#sha256=cd086bf69fafb879119d434964d0fd0920aa414c2b72fd29628920d6b5615e44 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,953   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.4-py3-none-any.whl#sha256=a5284594c607376665fb0592efa0f7696a9d1b437641b385a939bb6e171e5b58 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,954   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.3-py3-none-any.whl#sha256=c7787bffc57340080dbc84bbc30cf3adbec8c10947b34a038b821fd98f93e138 (from https://www.piwheels.org/simple/moleculekit/)
2023-07-31T12:52:01,954   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.2-py3-none-any.whl#sha256=0f9deb57395d35af8d9e4300bd57eb6fb5537feb62576b4df5611326e007a946 (from https://www.piwheels.org/simple/moleculekit/)
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2023-07-31T12:52:01,960 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-07-31T12:52:01,961 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-07-31T12:52:01,999 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-07-31T12:52:02,019 Collecting moleculekit==1.7.7
2023-07-31T12:52:02,021   Created temporary directory: /tmp/pip-unpack-x9to_ryq
2023-07-31T12:52:02,393   Downloading moleculekit-1.7.7.tar.gz (6.1 MB)
2023-07-31T12:52:05,202   Added moleculekit==1.7.7 from https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz to build tracker '/tmp/pip-build-tracker-h0or316q'
2023-07-31T12:52:05,211   Created temporary directory: /tmp/pip-build-env-rpa81xo2
2023-07-31T12:52:05,221   Installing build dependencies: started
2023-07-31T12:52:05,222   Running command pip subprocess to install build dependencies
2023-07-31T12:52:06,386   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-07-31T12:52:06,750   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-07-31T12:52:08,437   Collecting setuptools
2023-07-31T12:52:08,507     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB)
2023-07-31T12:52:09,842   Collecting numpy>=1.18.5
2023-07-31T12:52:10,747     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.1-cp39-cp39-linux_armv7l.whl (12.5 MB)
2023-07-31T12:52:12,689   Collecting Cython>=0.29.21
2023-07-31T12:52:13,470     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.0-cp39-cp39-linux_armv7l.whl (10.6 MB)
2023-07-31T12:52:13,839   Collecting toml
2023-07-31T12:52:13,858     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-07-31T12:52:13,958   Collecting versioneer[toml]==0.28
2023-07-31T12:52:13,986     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-07-31T12:52:14,118   Collecting tomli (from versioneer[toml]==0.28)
2023-07-31T12:52:14,140     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-07-31T12:52:16,043   Installing collected packages: versioneer, tomli, toml, setuptools, numpy, Cython
2023-07-31T12:52:16,079     Creating /tmp/pip-build-env-rpa81xo2/overlay/bin
2023-07-31T12:52:16,082     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/versioneer to 755
2023-07-31T12:52:26,602     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/f2py to 755
2023-07-31T12:52:26,604     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/f2py3 to 755
2023-07-31T12:52:26,607     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/f2py3.9 to 755
2023-07-31T12:52:30,113     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/cygdb to 755
2023-07-31T12:52:30,116     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/cython to 755
2023-07-31T12:52:30,118     changing mode of /tmp/pip-build-env-rpa81xo2/overlay/bin/cythonize to 755
2023-07-31T12:52:30,145   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2023-07-31T12:52:30,145   scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.1 which is incompatible.
2023-07-31T12:52:30,145   Successfully installed Cython-3.0.0 numpy-1.25.1 setuptools-68.0.0 toml-0.10.2 tomli-2.0.1 versioneer-0.28

2023-07-31T12:52:30,159   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-07-31T12:52:30,159   [notice] To update, run: python3 -m pip install --upgrade pip
2023-07-31T12:52:30,535   Installing build dependencies: finished with status 'done'
2023-07-31T12:52:30,540   Getting requirements to build wheel: started
2023-07-31T12:52:30,541   Running command Getting requirements to build wheel
2023-07-31T12:53:08,979   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,980   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,980   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,980   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,980   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,981   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,981   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,981   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,981   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,981   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-07-31T12:53:08,981   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-07-31T12:53:08,982   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2023-07-31T12:53:08,982   [ 2/11] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2023-07-31T12:53:08,982   [ 3/11] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2023-07-31T12:53:08,982   [ 4/11] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2023-07-31T12:53:08,982   [ 5/11] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2023-07-31T12:53:08,982   [ 6/11] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2023-07-31T12:53:08,983   [ 7/11] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2023-07-31T12:53:08,983   [ 8/11] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2023-07-31T12:53:08,983   [ 9/11] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2023-07-31T12:53:08,983   [10/11] Cythonizing moleculekit/wrapping/wrapping.pyx
2023-07-31T12:53:08,983   [11/11] Cythonizing moleculekit/xtc_utils/xtc.pyx
2023-07-31T12:53:09,055   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-07-31T12:53:09,055     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-07-31T12:53:09,275   running egg_info
2023-07-31T12:53:09,282   writing moleculekit.egg-info/PKG-INFO
2023-07-31T12:53:09,284   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-07-31T12:53:09,286   writing requirements to moleculekit.egg-info/requires.txt
2023-07-31T12:53:09,288   writing top-level names to moleculekit.egg-info/top_level.txt
2023-07-31T12:53:09,320   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:09,355   reading manifest template 'MANIFEST.in'
2023-07-31T12:53:09,595   no previously-included directories found matching 'moleculekit/test-data'
2023-07-31T12:53:09,596   no previously-included directories found matching 'moleculekit/tests'
2023-07-31T12:53:09,597   no previously-included directories found matching 'package'
2023-07-31T12:53:09,597   adding license file 'LICENSE'
2023-07-31T12:53:09,614   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:10,562   Getting requirements to build wheel: finished with status 'done'
2023-07-31T12:53:10,577   Installing backend dependencies: started
2023-07-31T12:53:10,578   Running command pip subprocess to install backend dependencies
2023-07-31T12:53:11,851   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-07-31T12:53:12,256   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-07-31T12:53:12,702   Collecting wheel
2023-07-31T12:53:12,722     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.0-py3-none-any.whl (64 kB)
2023-07-31T12:53:14,225   Installing collected packages: wheel
2023-07-31T12:53:14,446     Creating /tmp/pip-build-env-rpa81xo2/normal/bin
2023-07-31T12:53:14,449     changing mode of /tmp/pip-build-env-rpa81xo2/normal/bin/wheel to 755
2023-07-31T12:53:14,462   Successfully installed wheel-0.41.0

2023-07-31T12:53:14,475   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-07-31T12:53:14,475   [notice] To update, run: python3 -m pip install --upgrade pip
2023-07-31T12:53:14,680   Installing backend dependencies: finished with status 'done'
2023-07-31T12:53:14,682   Created temporary directory: /tmp/pip-modern-metadata-pd8rmyof
2023-07-31T12:53:14,685   Preparing metadata (pyproject.toml): started
2023-07-31T12:53:14,686   Running command Preparing metadata (pyproject.toml)
2023-07-31T12:53:16,806   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-07-31T12:53:16,806     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-07-31T12:53:17,051   running dist_info
2023-07-31T12:53:17,053   creating /tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info
2023-07-31T12:53:17,059   writing /tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/PKG-INFO
2023-07-31T12:53:17,064   writing dependency_links to /tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/dependency_links.txt
2023-07-31T12:53:17,066   writing requirements to /tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/requires.txt
2023-07-31T12:53:17,067   writing top-level names to /tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/top_level.txt
2023-07-31T12:53:17,068   writing manifest file '/tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:17,100   reading manifest file '/tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:17,102   reading manifest template 'MANIFEST.in'
2023-07-31T12:53:17,350   no previously-included directories found matching 'moleculekit/test-data'
2023-07-31T12:53:17,350   no previously-included directories found matching 'moleculekit/tests'
2023-07-31T12:53:17,351   no previously-included directories found matching 'package'
2023-07-31T12:53:17,351   adding license file 'LICENSE'
2023-07-31T12:53:17,363   writing manifest file '/tmp/pip-modern-metadata-pd8rmyof/moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:17,372   creating '/tmp/pip-modern-metadata-pd8rmyof/moleculekit-1.7.7.dist-info'
2023-07-31T12:53:17,570   Preparing metadata (pyproject.toml): finished with status 'done'
2023-07-31T12:53:17,576   Source in /tmp/pip-wheel-ci6re5d8/moleculekit_e2b63e804f9a4c5796f67cd2aba2cc30 has version 1.7.7, which satisfies requirement moleculekit==1.7.7 from https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz
2023-07-31T12:53:17,577   Removed moleculekit==1.7.7 from https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz from build tracker '/tmp/pip-build-tracker-h0or316q'
2023-07-31T12:53:17,583 Created temporary directory: /tmp/pip-unpack-tmvxu1mx
2023-07-31T12:53:17,584 Building wheels for collected packages: moleculekit
2023-07-31T12:53:17,588   Created temporary directory: /tmp/pip-wheel-xlnsgalm
2023-07-31T12:53:17,589   Destination directory: /tmp/pip-wheel-xlnsgalm
2023-07-31T12:53:17,591   Building wheel for moleculekit (pyproject.toml): started
2023-07-31T12:53:17,592   Running command Building wheel for moleculekit (pyproject.toml)
2023-07-31T12:53:19,585   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-07-31T12:53:19,586     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-07-31T12:53:19,815   running bdist_wheel
2023-07-31T12:53:19,832   running build
2023-07-31T12:53:19,832   running build_py
2023-07-31T12:53:19,840   creating build
2023-07-31T12:53:19,841   creating build/lib.linux-armv7l-cpython-39
2023-07-31T12:53:19,842   creating build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,843   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,845   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,847   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,849   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,853   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,855   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,857   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,860   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,862   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,864   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,866   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,868   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,870   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,873   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,875   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,877   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,879   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,880   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,883   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,885   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,889   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:19,893   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-07-31T12:53:19,894   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-07-31T12:53:19,896   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-07-31T12:53:19,899   creating build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,900   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,903   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,905   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,907   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,910   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,912   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,914   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,916   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,919   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,921   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,923   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,925   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,928   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,931   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,933   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-07-31T12:53:19,937   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,937   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,940   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,942   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,945   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,946   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,949   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-07-31T12:53:19,952   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-07-31T12:53:19,953   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-07-31T12:53:19,956   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,957   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,959   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,962   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,964   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,966   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,969   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,971   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,973   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,975   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,977   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,979   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,982   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,985   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-07-31T12:53:19,988   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-07-31T12:53:19,989   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-07-31T12:53:19,992   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-07-31T12:53:19,994   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-07-31T12:53:19,996   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-07-31T12:53:19,999   creating build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-07-31T12:53:20,000   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-07-31T12:53:20,002   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-07-31T12:53:20,005   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-07-31T12:53:20,010   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-07-31T12:53:20,011   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-07-31T12:53:20,014   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-07-31T12:53:20,016   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-07-31T12:53:20,018   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-07-31T12:53:20,020   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-07-31T12:53:20,022   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-07-31T12:53:20,024   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-07-31T12:53:20,026   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-07-31T12:53:20,029   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-07-31T12:53:20,031   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-07-31T12:53:20,032   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-07-31T12:53:20,034   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-07-31T12:53:20,036   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-07-31T12:53:20,037   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-07-31T12:53:20,040   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-07-31T12:53:20,043   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-07-31T12:53:20,045   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-07-31T12:53:20,048   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-07-31T12:53:20,049   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-07-31T12:53:20,051   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-07-31T12:53:20,053   running egg_info
2023-07-31T12:53:20,060   writing moleculekit.egg-info/PKG-INFO
2023-07-31T12:53:20,062   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-07-31T12:53:20,063   writing requirements to moleculekit.egg-info/requires.txt
2023-07-31T12:53:20,065   writing top-level names to moleculekit.egg-info/top_level.txt
2023-07-31T12:53:20,084   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:20,093   reading manifest template 'MANIFEST.in'
2023-07-31T12:53:20,319   no previously-included directories found matching 'moleculekit/test-data'
2023-07-31T12:53:20,320   no previously-included directories found matching 'moleculekit/tests'
2023-07-31T12:53:20,321   no previously-included directories found matching 'package'
2023-07-31T12:53:20,321   adding license file 'LICENSE'
2023-07-31T12:53:20,338   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-07-31T12:53:20,348   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-07-31T12:53:20,348   !!

2023-07-31T12:53:20,349           ********************************************************************************
2023-07-31T12:53:20,349           ############################
2023-07-31T12:53:20,349           # Package would be ignored #
2023-07-31T12:53:20,349           ############################
2023-07-31T12:53:20,349           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-07-31T12:53:20,349           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,350           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,350           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-07-31T12:53:20,350           to the `packages` configuration field.

2023-07-31T12:53:20,350           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,350           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,350           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,351           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,351           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,351           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-07-31T12:53:20,351           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-07-31T12:53:20,351           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,351           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,351           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,352           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,352           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,352           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,352                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,352                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,353                 directory, all directories are treated like packages.
2023-07-31T12:53:20,353           ********************************************************************************

2023-07-31T12:53:20,353   !!
2023-07-31T12:53:20,353     check.warn(importable)
2023-07-31T12:53:20,353   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-07-31T12:53:20,353   !!

2023-07-31T12:53:20,354           ********************************************************************************
2023-07-31T12:53:20,354           ############################
2023-07-31T12:53:20,354           # Package would be ignored #
2023-07-31T12:53:20,354           ############################
2023-07-31T12:53:20,354           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-07-31T12:53:20,354           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,354           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,355           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-07-31T12:53:20,355           to the `packages` configuration field.

2023-07-31T12:53:20,355           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,355           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,355           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,355           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,356           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,356           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-07-31T12:53:20,356           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-07-31T12:53:20,356           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,356           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,356           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,356           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,357           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,357           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,357                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,357                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,357                 directory, all directories are treated like packages.
2023-07-31T12:53:20,357           ********************************************************************************

2023-07-31T12:53:20,358   !!
2023-07-31T12:53:20,358     check.warn(importable)
2023-07-31T12:53:20,358   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-07-31T12:53:20,358   !!

2023-07-31T12:53:20,358           ********************************************************************************
2023-07-31T12:53:20,358           ############################
2023-07-31T12:53:20,359           # Package would be ignored #
2023-07-31T12:53:20,359           ############################
2023-07-31T12:53:20,359           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-07-31T12:53:20,359           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,359           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,359           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-07-31T12:53:20,359           to the `packages` configuration field.

2023-07-31T12:53:20,360           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,360           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,360           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,360           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,360           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,360           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-07-31T12:53:20,361           already explicitly excluding 'moleculekit.distance_utils' via
2023-07-31T12:53:20,361           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,361           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,361           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,361           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,361           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,362           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,362                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,362                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,362                 directory, all directories are treated like packages.
2023-07-31T12:53:20,362           ********************************************************************************

2023-07-31T12:53:20,362   !!
2023-07-31T12:53:20,362     check.warn(importable)
2023-07-31T12:53:20,363   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-07-31T12:53:20,363   !!

2023-07-31T12:53:20,363           ********************************************************************************
2023-07-31T12:53:20,363           ############################
2023-07-31T12:53:20,363           # Package would be ignored #
2023-07-31T12:53:20,363           ############################
2023-07-31T12:53:20,363           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-07-31T12:53:20,363           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,364           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,364           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-07-31T12:53:20,364           to the `packages` configuration field.

2023-07-31T12:53:20,364           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,364           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,364           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,365           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,365           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,365           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-07-31T12:53:20,365           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-07-31T12:53:20,365           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,365           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,365           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,366           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,366           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,366           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,366                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,366                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,367                 directory, all directories are treated like packages.
2023-07-31T12:53:20,367           ********************************************************************************

2023-07-31T12:53:20,367   !!
2023-07-31T12:53:20,367     check.warn(importable)
2023-07-31T12:53:20,367   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-07-31T12:53:20,367   !!

2023-07-31T12:53:20,367           ********************************************************************************
2023-07-31T12:53:20,368           ############################
2023-07-31T12:53:20,368           # Package would be ignored #
2023-07-31T12:53:20,368           ############################
2023-07-31T12:53:20,368           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-07-31T12:53:20,368           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,368           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,368           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-07-31T12:53:20,368           to the `packages` configuration field.

2023-07-31T12:53:20,369           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,369           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,369           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,369           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,369           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,370           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-07-31T12:53:20,370           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-07-31T12:53:20,370           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,370           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,370           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,370           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,371           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,371           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,371                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,371                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,371                 directory, all directories are treated like packages.
2023-07-31T12:53:20,371           ********************************************************************************

2023-07-31T12:53:20,372   !!
2023-07-31T12:53:20,372     check.warn(importable)
2023-07-31T12:53:20,372   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-07-31T12:53:20,372   !!

2023-07-31T12:53:20,372           ********************************************************************************
2023-07-31T12:53:20,372           ############################
2023-07-31T12:53:20,372           # Package would be ignored #
2023-07-31T12:53:20,373           ############################
2023-07-31T12:53:20,373           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-07-31T12:53:20,373           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,373           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,373           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-07-31T12:53:20,373           to the `packages` configuration field.

2023-07-31T12:53:20,373           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,374           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,374           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,374           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,374           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,374           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-07-31T12:53:20,374           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-07-31T12:53:20,375           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,375           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,375           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,375           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,375           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,376           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,376                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,376                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,376                 directory, all directories are treated like packages.
2023-07-31T12:53:20,376           ********************************************************************************

2023-07-31T12:53:20,376   !!
2023-07-31T12:53:20,376     check.warn(importable)
2023-07-31T12:53:20,376   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-07-31T12:53:20,377   !!

2023-07-31T12:53:20,377           ********************************************************************************
2023-07-31T12:53:20,377           ############################
2023-07-31T12:53:20,377           # Package would be ignored #
2023-07-31T12:53:20,377           ############################
2023-07-31T12:53:20,377           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-07-31T12:53:20,377           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,378           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,378           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-07-31T12:53:20,378           to the `packages` configuration field.

2023-07-31T12:53:20,378           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,378           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,378           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,379           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,379           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,379           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-07-31T12:53:20,379           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-07-31T12:53:20,379           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,379           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,379           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,380           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,380           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,380           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,380                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,380                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,380                 directory, all directories are treated like packages.
2023-07-31T12:53:20,381           ********************************************************************************

2023-07-31T12:53:20,381   !!
2023-07-31T12:53:20,381     check.warn(importable)
2023-07-31T12:53:20,381   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-07-31T12:53:20,381   !!

2023-07-31T12:53:20,381           ********************************************************************************
2023-07-31T12:53:20,381           ############################
2023-07-31T12:53:20,382           # Package would be ignored #
2023-07-31T12:53:20,382           ############################
2023-07-31T12:53:20,382           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-07-31T12:53:20,382           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,382           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,382           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-07-31T12:53:20,382           to the `packages` configuration field.

2023-07-31T12:53:20,383           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,383           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,383           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,383           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,383           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,383           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-07-31T12:53:20,384           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-07-31T12:53:20,384           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,384           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,384           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,384           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,384           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,385           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,385                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,385                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,385                 directory, all directories are treated like packages.
2023-07-31T12:53:20,385           ********************************************************************************

2023-07-31T12:53:20,385   !!
2023-07-31T12:53:20,385     check.warn(importable)
2023-07-31T12:53:20,386   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-07-31T12:53:20,386   !!

2023-07-31T12:53:20,386           ********************************************************************************
2023-07-31T12:53:20,386           ############################
2023-07-31T12:53:20,386           # Package would be ignored #
2023-07-31T12:53:20,386           ############################
2023-07-31T12:53:20,386           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-07-31T12:53:20,386           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,387           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,387           package, please make sure that 'moleculekit.share' is explicitly added
2023-07-31T12:53:20,387           to the `packages` configuration field.

2023-07-31T12:53:20,388           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,388           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,388           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,388           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,388           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,389           If you don't want 'moleculekit.share' to be distributed and are
2023-07-31T12:53:20,389           already explicitly excluding 'moleculekit.share' via
2023-07-31T12:53:20,389           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,389           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,389           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,390           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,390           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,390           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,390                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,391                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,391                 directory, all directories are treated like packages.
2023-07-31T12:53:20,391           ********************************************************************************

2023-07-31T12:53:20,391   !!
2023-07-31T12:53:20,391     check.warn(importable)
2023-07-31T12:53:20,391   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-07-31T12:53:20,391   !!

2023-07-31T12:53:20,392           ********************************************************************************
2023-07-31T12:53:20,392           ############################
2023-07-31T12:53:20,392           # Package would be ignored #
2023-07-31T12:53:20,392           ############################
2023-07-31T12:53:20,392           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-07-31T12:53:20,392           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,393           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,393           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-07-31T12:53:20,393           to the `packages` configuration field.

2023-07-31T12:53:20,393           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,393           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,393           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,394           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,394           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,394           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-07-31T12:53:20,394           already explicitly excluding 'moleculekit.share.atomselect' via
2023-07-31T12:53:20,394           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,394           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,395           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,395           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,395           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,395           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,396                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,396                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,396                 directory, all directories are treated like packages.
2023-07-31T12:53:20,396           ********************************************************************************

2023-07-31T12:53:20,396   !!
2023-07-31T12:53:20,396     check.warn(importable)
2023-07-31T12:53:20,396   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-07-31T12:53:20,397   !!

2023-07-31T12:53:20,397           ********************************************************************************
2023-07-31T12:53:20,397           ############################
2023-07-31T12:53:20,397           # Package would be ignored #
2023-07-31T12:53:20,397           ############################
2023-07-31T12:53:20,397           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-07-31T12:53:20,397           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,398           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,398           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-07-31T12:53:20,398           to the `packages` configuration field.

2023-07-31T12:53:20,398           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,398           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,398           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,399           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,399           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,399           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-07-31T12:53:20,399           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-07-31T12:53:20,399           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,399           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,400           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,400           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,400           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,400           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,401                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,401                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,401                 directory, all directories are treated like packages.
2023-07-31T12:53:20,401           ********************************************************************************

2023-07-31T12:53:20,401   !!
2023-07-31T12:53:20,401     check.warn(importable)
2023-07-31T12:53:20,402   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-07-31T12:53:20,402   !!

2023-07-31T12:53:20,402           ********************************************************************************
2023-07-31T12:53:20,402           ############################
2023-07-31T12:53:20,402           # Package would be ignored #
2023-07-31T12:53:20,402           ############################
2023-07-31T12:53:20,403           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-07-31T12:53:20,403           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,403           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,403           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-07-31T12:53:20,404           to the `packages` configuration field.

2023-07-31T12:53:20,404           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,404           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,404           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,404           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,405           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,405           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-07-31T12:53:20,405           already explicitly excluding 'moleculekit.tmalign' via
2023-07-31T12:53:20,405           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,406           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,406           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,406           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,406           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,407           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,407                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,407                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,407                 directory, all directories are treated like packages.
2023-07-31T12:53:20,408           ********************************************************************************

2023-07-31T12:53:20,408   !!
2023-07-31T12:53:20,408     check.warn(importable)
2023-07-31T12:53:20,408   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-07-31T12:53:20,408   !!

2023-07-31T12:53:20,409           ********************************************************************************
2023-07-31T12:53:20,409           ############################
2023-07-31T12:53:20,409           # Package would be ignored #
2023-07-31T12:53:20,409           ############################
2023-07-31T12:53:20,409           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-07-31T12:53:20,410           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,410           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,410           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-07-31T12:53:20,410           to the `packages` configuration field.

2023-07-31T12:53:20,411           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,411           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,411           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,411           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,411           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,412           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-07-31T12:53:20,412           already explicitly excluding 'moleculekit.tmalign.include' via
2023-07-31T12:53:20,412           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,412           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,412           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,413           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,413           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,413           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,413                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,414                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,414                 directory, all directories are treated like packages.
2023-07-31T12:53:20,414           ********************************************************************************

2023-07-31T12:53:20,414   !!
2023-07-31T12:53:20,415     check.warn(importable)
2023-07-31T12:53:20,415   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-07-31T12:53:20,415   !!

2023-07-31T12:53:20,415           ********************************************************************************
2023-07-31T12:53:20,415           ############################
2023-07-31T12:53:20,415           # Package would be ignored #
2023-07-31T12:53:20,416           ############################
2023-07-31T12:53:20,416           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-07-31T12:53:20,416           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,416           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,416           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-07-31T12:53:20,416           to the `packages` configuration field.

2023-07-31T12:53:20,417           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,417           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,417           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,417           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,417           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,418           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-07-31T12:53:20,418           already explicitly excluding 'moleculekit.tmalign.src' via
2023-07-31T12:53:20,418           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,418           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,418           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,418           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,419           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,419           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,419                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,419                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,419                 directory, all directories are treated like packages.
2023-07-31T12:53:20,419           ********************************************************************************

2023-07-31T12:53:20,420   !!
2023-07-31T12:53:20,420     check.warn(importable)
2023-07-31T12:53:20,420   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-07-31T12:53:20,420   !!

2023-07-31T12:53:20,420           ********************************************************************************
2023-07-31T12:53:20,421           ############################
2023-07-31T12:53:20,421           # Package would be ignored #
2023-07-31T12:53:20,421           ############################
2023-07-31T12:53:20,421           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-07-31T12:53:20,421           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,421           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,421           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-07-31T12:53:20,422           to the `packages` configuration field.

2023-07-31T12:53:20,422           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,422           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,422           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,422           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,423           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,423           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-07-31T12:53:20,423           already explicitly excluding 'moleculekit.wrapping' via
2023-07-31T12:53:20,423           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,423           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,423           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,424           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,424           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,424           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,424                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,424                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,424                 directory, all directories are treated like packages.
2023-07-31T12:53:20,425           ********************************************************************************

2023-07-31T12:53:20,425   !!
2023-07-31T12:53:20,425     check.warn(importable)
2023-07-31T12:53:20,425   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-07-31T12:53:20,425   !!

2023-07-31T12:53:20,425           ********************************************************************************
2023-07-31T12:53:20,426           ############################
2023-07-31T12:53:20,426           # Package would be ignored #
2023-07-31T12:53:20,426           ############################
2023-07-31T12:53:20,426           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-07-31T12:53:20,426           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,426           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,426           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-07-31T12:53:20,426           to the `packages` configuration field.

2023-07-31T12:53:20,427           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,427           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,427           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,427           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,427           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,428           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-07-31T12:53:20,428           already explicitly excluding 'moleculekit.xtc_utils' via
2023-07-31T12:53:20,428           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,428           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,428           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,428           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,429           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,429           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,429                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,429                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,429                 directory, all directories are treated like packages.
2023-07-31T12:53:20,430           ********************************************************************************

2023-07-31T12:53:20,430   !!
2023-07-31T12:53:20,430     check.warn(importable)
2023-07-31T12:53:20,430   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-07-31T12:53:20,430   !!

2023-07-31T12:53:20,430           ********************************************************************************
2023-07-31T12:53:20,431           ############################
2023-07-31T12:53:20,431           # Package would be ignored #
2023-07-31T12:53:20,431           ############################
2023-07-31T12:53:20,431           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-07-31T12:53:20,431           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,431           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,432           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-07-31T12:53:20,432           to the `packages` configuration field.

2023-07-31T12:53:20,432           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,432           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,432           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,433           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,433           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,433           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-07-31T12:53:20,433           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-07-31T12:53:20,434           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,434           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,434           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,434           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,434           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,435           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,435                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,435                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,435                 directory, all directories are treated like packages.
2023-07-31T12:53:20,435           ********************************************************************************

2023-07-31T12:53:20,435   !!
2023-07-31T12:53:20,436     check.warn(importable)
2023-07-31T12:53:20,436   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-07-31T12:53:20,436   !!

2023-07-31T12:53:20,436           ********************************************************************************
2023-07-31T12:53:20,436           ############################
2023-07-31T12:53:20,436           # Package would be ignored #
2023-07-31T12:53:20,436           ############################
2023-07-31T12:53:20,437           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-07-31T12:53:20,437           but it is absent from setuptools' `packages` configuration.

2023-07-31T12:53:20,437           This leads to an ambiguous overall configuration. If you want to distribute this
2023-07-31T12:53:20,437           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-07-31T12:53:20,437           to the `packages` configuration field.

2023-07-31T12:53:20,437           Alternatively, you can also rely on setuptools' discovery methods
2023-07-31T12:53:20,438           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-07-31T12:53:20,438           instead of `find_packages(...)`/`find:`).

2023-07-31T12:53:20,438           You can read more about "package discovery" on setuptools documentation page:

2023-07-31T12:53:20,438           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-07-31T12:53:20,439           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-07-31T12:53:20,439           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-07-31T12:53:20,439           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-07-31T12:53:20,439           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-07-31T12:53:20,439           combination with a more fine grained `package-data` configuration.

2023-07-31T12:53:20,440           You can read more about "package data files" on setuptools documentation page:

2023-07-31T12:53:20,440           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-07-31T12:53:20,440           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-07-31T12:53:20,441                 even if it does not contain any `.py` files.
2023-07-31T12:53:20,441                 On the other hand, currently there is no concept of package data
2023-07-31T12:53:20,441                 directory, all directories are treated like packages.
2023-07-31T12:53:20,441           ********************************************************************************

2023-07-31T12:53:20,441   !!
2023-07-31T12:53:20,442     check.warn(importable)
2023-07-31T12:53:20,442   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:20,442   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:20,442   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-07-31T12:53:20,442   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-07-31T12:53:20,442   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-07-31T12:53:20,443   creating build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-07-31T12:53:20,443   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-07-31T12:53:20,449   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-07-31T12:53:20,451   creating build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-07-31T12:53:20,452   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-07-31T12:53:20,476   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-07-31T12:53:20,479   creating build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-07-31T12:53:20,479   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-07-31T12:53:20,498   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-07-31T12:53:20,500   creating build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-07-31T12:53:20,501   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-07-31T12:53:20,504   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-07-31T12:53:20,506   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-07-31T12:53:20,706   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-07-31T12:53:20,707   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-07-31T12:53:20,710   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr
2023-07-31T12:53:20,710   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,712   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,714   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,716   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,718   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,720   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,723   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,725   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,728   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,730   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,733   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,735   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,737   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,739   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,742   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,744   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,746   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,748   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,751   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,753   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,755   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,757   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,760   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,762   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,765   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,767   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,770   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,772   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,774   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,776   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,778   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,781   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,783   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,785   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,787   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,789   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,792   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,794   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,797   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,799   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,801   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,803   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,806   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,808   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,810   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,812   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,814   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,817   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,819   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,821   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,823   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,825   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,828   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,830   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,832   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,834   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,837   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,839   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,841   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,843   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,845   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,848   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,850   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,852   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,854   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,856   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,859   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,861   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,864   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,866   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,869   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,871   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,874   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,876   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,879   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,881   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,884   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,887   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,889   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,892   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,894   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,897   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,899   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,902   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,905   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,907   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,910   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,912   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,915   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,917   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,920   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,923   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,925   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,928   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,930   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,933   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,935   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,938   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,940   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,943   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,945   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,947   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,950   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,953   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,955   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,958   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,960   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,963   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,966   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,968   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,970   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,973   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,976   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,978   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,981   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,983   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,986   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,989   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,992   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,994   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,997   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:20,999   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,002   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,004   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,007   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,009   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,012   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,014   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,017   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,019   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,022   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,024   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,027   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,029   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,032   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,035   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,037   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,040   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,042   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,045   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,047   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,050   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,052   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,055   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,057   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,060   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,063   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,065   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,068   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,070   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,073   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,075   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,078   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,081   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,084   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,086   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,089   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,092   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,094   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,097   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,100   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,102   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,105   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,107   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,109   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,112   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,114   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,116   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,119   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,121   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,123   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,126   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,128   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,131   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,133   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,136   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-07-31T12:53:21,138   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-07-31T12:53:21,140   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-07-31T12:53:21,159   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-07-31T12:53:21,161   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-07-31T12:53:21,163   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-07-31T12:53:21,164   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-07-31T12:53:21,166   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-07-31T12:53:21,167   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-07-31T12:53:21,173   creating build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-07-31T12:53:21,174   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-07-31T12:53:21,191   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-07-31T12:53:21,194   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-07-31T12:53:21,195   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-07-31T12:53:21,229   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-07-31T12:53:21,232   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-07-31T12:53:21,234   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-07-31T12:53:21,235   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-07-31T12:53:21,238   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-07-31T12:53:21,241   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-07-31T12:53:21,243   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-07-31T12:53:21,244   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-07-31T12:53:21,250   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-07-31T12:53:21,253   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-07-31T12:53:21,256   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-07-31T12:53:21,258   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-07-31T12:53:21,291   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-07-31T12:53:21,295   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-07-31T12:53:21,296   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-07-31T12:53:21,315   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-07-31T12:53:21,317   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-07-31T12:53:21,318   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-07-31T12:53:21,339   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-07-31T12:53:21,341   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-07-31T12:53:21,342   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-07-31T12:53:21,364   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-07-31T12:53:21,376   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-07-31T12:53:21,376   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.7.7'
2023-07-31T12:53:21,376   running build_ext
2023-07-31T12:53:21,388   building 'moleculekit.interactions.hbonds' extension
2023-07-31T12:53:21,389   creating build/temp.linux-armv7l-cpython-39
2023-07-31T12:53:21,389   creating build/temp.linux-armv7l-cpython-39/moleculekit
2023-07-31T12:53:21,390   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions
2023-07-31T12:53:21,391   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-07-31T12:53:21,392   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -O3
2023-07-31T12:53:21,676   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:53:21,676                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:53:21,677                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:53:21,677                    from moleculekit/interactions/hbonds/hbonds.cpp:1122:
2023-07-31T12:53:21,677   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:53:21,677      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:53:21,677         |  ^~~~~~~
2023-07-31T12:53:47,671   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:53:47,995   building 'moleculekit.interactions.pipi' extension
2023-07-31T12:53:47,996   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-07-31T12:53:47,997   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -O3
2023-07-31T12:53:48,239   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:53:48,239                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:53:48,239                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:53:48,239                    from moleculekit/interactions/pipi/pipi.cpp:1122:
2023-07-31T12:53:48,239   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:53:48,240      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:53:48,240         |  ^~~~~~~
2023-07-31T12:54:16,132   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:54:16,452   building 'moleculekit.interactions.cationpi' extension
2023-07-31T12:54:16,452   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-07-31T12:54:16,453   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -O3
2023-07-31T12:54:16,692   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:54:16,693                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:54:16,693                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:54:16,693                    from moleculekit/interactions/cationpi/cationpi.cpp:1122:
2023-07-31T12:54:16,693   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:54:16,693      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:54:16,693         |  ^~~~~~~
2023-07-31T12:54:44,386   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:54:44,707   building 'moleculekit.interactions.sigmahole' extension
2023-07-31T12:54:44,708   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-07-31T12:54:44,709   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-07-31T12:54:44,940   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:54:44,941                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:54:44,941                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:54:44,941                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1122:
2023-07-31T12:54:44,941   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:54:44,941      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:54:44,941         |  ^~~~~~~
2023-07-31T12:55:12,257   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:55:12,574   building 'moleculekit.wrapping' extension
2023-07-31T12:55:12,574   creating build/temp.linux-armv7l-cpython-39/moleculekit/wrapping
2023-07-31T12:55:12,575   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -O3
2023-07-31T12:55:12,815   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:55:12,816                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:55:12,816                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:55:12,816                    from moleculekit/wrapping/wrapping.cpp:1122:
2023-07-31T12:55:12,817   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:55:12,817      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:55:12,817         |  ^~~~~~~
2023-07-31T12:55:36,548   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:55:36,760   building 'moleculekit.bondguesser_utils' extension
2023-07-31T12:55:36,761   creating build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-07-31T12:55:36,761   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-07-31T12:55:37,000   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:55:37,000                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:55:37,001                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:55:37,001                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1122:
2023-07-31T12:55:37,001   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:55:37,001      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:55:37,001         |  ^~~~~~~
2023-07-31T12:55:38,590   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-07-31T12:55:38,590   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19262:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-07-31T12:55:38,590   19262 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-07-31T12:55:38,590         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-07-31T12:55:38,591   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19274:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-07-31T12:55:38,591   19274 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-07-31T12:55:38,591         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-07-31T12:55:38,591   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19286:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-07-31T12:55:38,591   19286 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-07-31T12:55:38,591         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-07-31T12:55:38,591   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19325:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,592   19325 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-07-31T12:55:38,592         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,592   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19364:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,592   19364 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-07-31T12:55:38,592         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,592   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19403:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,593   19403 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,593         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,593   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19442:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,593   19442 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-07-31T12:55:38,593         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,593   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19448:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,593   19448 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-07-31T12:55:38,593         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,594   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19489:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,594   19489 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-07-31T12:55:38,594         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,594   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19495:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,594   19495 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,594         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,594   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19536:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,595   19536 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-07-31T12:55:38,595         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,595   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19542:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,595   19542 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,595         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,595   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19583:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,595   19583 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-07-31T12:55:38,596         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,596   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19636:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,596   19636 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,596         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,596   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19683:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,596   19683 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,596         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,597   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19724:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,597   19724 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-07-31T12:55:38,597         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,597   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19730:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,597   19730 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-07-31T12:55:38,597         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,597   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19736:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,598   19736 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,598         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,598   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19783:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,598   19783 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-07-31T12:55:38,598         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,598   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19789:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,598   19789 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,599         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,599   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19830:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,599   19830 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-07-31T12:55:38,599         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,599   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19842:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,599   19842 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,600         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,600   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19895:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-07-31T12:55:38,600   19895 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-07-31T12:55:38,600         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,619   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-07-31T12:55:38,619   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20477:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-07-31T12:55:38,619   20477 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2023-07-31T12:55:38,619         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-07-31T12:55:38,620   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20514:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-07-31T12:55:38,620   20514 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2023-07-31T12:55:38,620         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-07-31T12:56:01,633   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:56:01,932   building 'moleculekit.atomselect_utils' extension
2023-07-31T12:56:01,933   creating build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-07-31T12:56:01,934   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-07-31T12:56:02,164   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:56:02,165                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:56:02,165                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:56:02,165                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1139:
2023-07-31T12:56:02,165   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:56:02,165      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:56:02,165         |  ^~~~~~~
2023-07-31T12:56:03,895   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-07-31T12:56:03,896   moleculekit/atomselect_utils/atomselect_utils.cpp:23248:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-07-31T12:56:03,896   23248 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2023-07-31T12:56:03,896         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-07-31T12:56:03,901   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-07-31T12:56:03,901   moleculekit/atomselect_utils/atomselect_utils.cpp:23503:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-07-31T12:56:03,901   23503 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-07-31T12:56:03,901         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-07-31T12:56:03,906   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-07-31T12:56:03,906   moleculekit/atomselect_utils/atomselect_utils.cpp:23773:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-07-31T12:56:03,906   23773 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-07-31T12:56:03,907         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-07-31T12:56:34,433   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:56:34,759   building 'moleculekit.distance_utils' extension
2023-07-31T12:56:34,760   creating build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-07-31T12:56:34,761   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -O3
2023-07-31T12:56:35,001   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:56:35,002                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:56:35,002                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:56:35,002                    from moleculekit/distance_utils/distance_utils.cpp:1122:
2023-07-31T12:56:35,002   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:56:35,002      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:56:35,002         |  ^~~~~~~
2023-07-31T12:57:07,185   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:57:07,508   building 'moleculekit.occupancy_utils' extension
2023-07-31T12:57:07,509   creating build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-07-31T12:57:07,509   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-07-31T12:57:07,755   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:57:07,755                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:57:07,755                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:57:07,755                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1122:
2023-07-31T12:57:07,755   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:57:07,756      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:57:07,756         |  ^~~~~~~
2023-07-31T12:57:30,765   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:57:30,973   building 'moleculekit.xtc' extension
2023-07-31T12:57:30,974   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-07-31T12:57:30,974   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-07-31T12:57:30,975   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o
2023-07-31T12:57:31,219   moleculekit/xtc_utils/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,220      66 |  "OK",
2023-07-31T12:57:31,220         |  ^~~~
2023-07-31T12:57:31,220   moleculekit/xtc_utils/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,220      67 |  "Header",
2023-07-31T12:57:31,220         |  ^~~~~~~~
2023-07-31T12:57:31,221   moleculekit/xtc_utils/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,221      68 |  "String",
2023-07-31T12:57:31,221         |  ^~~~~~~~
2023-07-31T12:57:31,221   moleculekit/xtc_utils/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,221      69 |  "Double",
2023-07-31T12:57:31,221         |  ^~~~~~~~
2023-07-31T12:57:31,221   moleculekit/xtc_utils/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,222      70 |  "Integer",
2023-07-31T12:57:31,222         |  ^~~~~~~~~
2023-07-31T12:57:31,222   moleculekit/xtc_utils/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,222      71 |  "Float",
2023-07-31T12:57:31,222         |  ^~~~~~~
2023-07-31T12:57:31,222   moleculekit/xtc_utils/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,222      72 |  "Unsigned integer",
2023-07-31T12:57:31,223         |  ^~~~~~~~~~~~~~~~~~
2023-07-31T12:57:31,223   moleculekit/xtc_utils/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,223      73 |  "Compressed 3D coordinate",
2023-07-31T12:57:31,223         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:57:31,223   moleculekit/xtc_utils/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,223      74 |  "Closing file",
2023-07-31T12:57:31,223         |  ^~~~~~~~~~~~~~
2023-07-31T12:57:31,224   moleculekit/xtc_utils/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,224      75 |  "Magic number",
2023-07-31T12:57:31,224         |  ^~~~~~~~~~~~~~
2023-07-31T12:57:31,224   moleculekit/xtc_utils/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,224      76 |  "Not enough memory",
2023-07-31T12:57:31,224         |  ^~~~~~~~~~~~~~~~~~~
2023-07-31T12:57:31,224   moleculekit/xtc_utils/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,225      77 |  "End of file",
2023-07-31T12:57:31,225         |  ^~~~~~~~~~~~~
2023-07-31T12:57:31,225   moleculekit/xtc_utils/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-31T12:57:31,225      78 |  "File not found"
2023-07-31T12:57:31,225         |  ^~~~~~~~~~~~~~~~
2023-07-31T12:57:31,229   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-07-31T12:57:31,230   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,230     459 |     while (size >= num && num_of_bits < 32)
2023-07-31T12:57:31,230         |            ~~~~~^~~~~~
2023-07-31T12:57:31,230   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-07-31T12:57:31,230   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,231     505 |     while (bytes[num_of_bytes] >= num)
2023-07-31T12:57:31,231         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-07-31T12:57:31,233   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-07-31T12:57:31,233   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,233     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-07-31T12:57:31,233         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-07-31T12:57:31,233   moleculekit/xtc_utils/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,234     616 |   for (i = 0; i < num_of_bytes; i++)
2023-07-31T12:57:31,234         |               ~~^~~~~~~~~~~~~~
2023-07-31T12:57:31,234   moleculekit/xtc_utils/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,234     624 |   for (i = 0; i < num_of_bytes-1; i++)
2023-07-31T12:57:31,234         |               ~~^~~~~~~~~~~~~~~~
2023-07-31T12:57:31,234   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-07-31T12:57:31,234   moleculekit/xtc_utils/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,235     664 |   if (lastbits < num_of_bits)
2023-07-31T12:57:31,235         |       ~~~~~~~~~^~~~~~~~~~~~~
2023-07-31T12:57:31,238   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-07-31T12:57:31,238   moleculekit/xtc_utils/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,238     785 |  if(size3>xfp->buf1size)
2023-07-31T12:57:31,238         |     ~~~~~^~~~~~~~~~~~~~
2023-07-31T12:57:31,240   moleculekit/xtc_utils/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,240     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-07-31T12:57:31,240         |                   ^
2023-07-31T12:57:31,242   moleculekit/xtc_utils/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,243     932 |     if(countmjh >= size3 ) { return -1; }
2023-07-31T12:57:31,243         |        ~~~~~~~~~^~~~~~~~
2023-07-31T12:57:31,243   moleculekit/xtc_utils/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,243     935 |     if(countmjh >= size3 ) { return -1; }
2023-07-31T12:57:31,243         |        ~~~~~~~~~^~~~~~~~
2023-07-31T12:57:31,243   moleculekit/xtc_utils/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,244     938 |     if(countmjh >= size3 ) { return -1; }
2023-07-31T12:57:31,244         |        ~~~~~~~~~^~~~~~~~
2023-07-31T12:57:31,244   moleculekit/xtc_utils/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,244     945 |     if(countmjh >= size3 ) { return -1; }
2023-07-31T12:57:31,244         |        ~~~~~~~~~^~~~~~~~
2023-07-31T12:57:31,244   moleculekit/xtc_utils/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,244     948 |     if(countmjh >= size3 ) { return -1; }
2023-07-31T12:57:31,245         |        ~~~~~~~~~^~~~~~~~
2023-07-31T12:57:31,245   moleculekit/xtc_utils/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,245     951 |     if(countmjh >= size3 ) { return -1; }
2023-07-31T12:57:31,245         |        ~~~~~~~~~^~~~~~~~
2023-07-31T12:57:31,245   moleculekit/xtc_utils/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-07-31T12:57:31,245     756 |  int smallidx,  minidx, maxidx;
2023-07-31T12:57:31,245         |                 ^~~~~~
2023-07-31T12:57:31,246   moleculekit/xtc_utils/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-07-31T12:57:31,246     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-07-31T12:57:31,246         |                         ^~~~~~
2023-07-31T12:57:31,246   moleculekit/xtc_utils/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-07-31T12:57:31,246     763 |  int errval=1;
2023-07-31T12:57:31,246         |      ^~~~~~
2023-07-31T12:57:31,247   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-07-31T12:57:31,247   moleculekit/xtc_utils/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,247    1011 |  if(size3>xfp->buf1size)
2023-07-31T12:57:31,247         |     ~~~~~^~~~~~~~~~~~~~
2023-07-31T12:57:31,249   moleculekit/xtc_utils/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,249    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2023-07-31T12:57:31,249         |                     ~~~~~~~~^~~~~~~
2023-07-31T12:57:31,250   moleculekit/xtc_utils/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,250    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2023-07-31T12:57:31,250         |                    ~~~~~~~~^~~~~~~
2023-07-31T12:57:31,250   moleculekit/xtc_utils/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,250    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2023-07-31T12:57:31,251         |                    ~~~~~~~~^~~~~~~
2023-07-31T12:57:31,252   moleculekit/xtc_utils/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,252    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-07-31T12:57:31,252         |                  ^
2023-07-31T12:57:31,252   moleculekit/xtc_utils/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,253    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-07-31T12:57:31,253         |                   ^
2023-07-31T12:57:31,256   moleculekit/xtc_utils/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,256    1275 |  if(tmp==(unsigned int)buf2[0])
2023-07-31T12:57:31,256         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:57:31,257   moleculekit/xtc_utils/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-07-31T12:57:31,257    1001 |  int errval;
2023-07-31T12:57:31,257         |      ^~~~~~
2023-07-31T12:57:31,259   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-07-31T12:57:31,260   moleculekit/xtc_utils/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,260    1316 |  if(size3>xfp->buf1size)
2023-07-31T12:57:31,260         |     ~~~~~^~~~~~~~~~~~~~
2023-07-31T12:57:31,261   moleculekit/xtc_utils/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,262    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-07-31T12:57:31,262         |                   ^
2023-07-31T12:57:31,264   moleculekit/xtc_utils/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-07-31T12:57:31,264    1289 |  int smallidx,  maxidx, minidx;
2023-07-31T12:57:31,264         |                         ^~~~~~
2023-07-31T12:57:31,265   moleculekit/xtc_utils/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-07-31T12:57:31,265    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-07-31T12:57:31,265         |                         ^~~~~~
2023-07-31T12:57:31,265   moleculekit/xtc_utils/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-07-31T12:57:31,265    1297 |  int errval=1;
2023-07-31T12:57:31,265         |      ^~~~~~
2023-07-31T12:57:31,266   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-07-31T12:57:31,267   moleculekit/xtc_utils/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,267    1513 |  if(size3>xfp->buf1size) {
2023-07-31T12:57:31,267         |     ~~~~~^~~~~~~~~~~~~~
2023-07-31T12:57:31,271   moleculekit/xtc_utils/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,271    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-07-31T12:57:31,271         |                  ^
2023-07-31T12:57:31,271   moleculekit/xtc_utils/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-07-31T12:57:31,272    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-07-31T12:57:31,272         |                   ^
2023-07-31T12:57:31,275   moleculekit/xtc_utils/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-07-31T12:57:31,275    1743 |  if(tmp==(unsigned int)buf2[0])
2023-07-31T12:57:31,275         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-07-31T12:57:31,276   moleculekit/xtc_utils/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-07-31T12:57:31,276    1504 |  int errval=1;
2023-07-31T12:57:31,276         |      ^~~~~~
2023-07-31T12:57:33,519   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-07-31T12:57:33,774   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o
2023-07-31T12:57:34,351   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-07-31T12:57:34,352   moleculekit/xtc_utils/src/xtc.cpp:207:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-07-31T12:57:34,352     207 |  int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-07-31T12:57:34,352         |      ^~~
2023-07-31T12:57:34,359   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-07-31T12:57:34,359   moleculekit/xtc_utils/src/xtc.cpp:418:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-07-31T12:57:34,359     418 |  int nf3 = nframes * 3;
2023-07-31T12:57:34,359         |      ^~~
2023-07-31T12:57:34,364   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-07-31T12:57:34,365   moleculekit/xtc_utils/src/xtc.cpp:491:6: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-07-31T12:57:34,365     491 |  int reading_index = 0;
2023-07-31T12:57:34,365         |      ^~~~~~~~~~~~~
2023-07-31T12:57:34,365   moleculekit/xtc_utils/src/xtc.cpp:492:6: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-07-31T12:57:34,365     492 |  int writing_index = 0;
2023-07-31T12:57:34,365         |      ^~~~~~~~~~~~~
2023-07-31T12:57:35,131   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o
2023-07-31T12:57:35,373   In file included from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-07-31T12:57:35,373                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-07-31T12:57:35,374                    from /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-07-31T12:57:35,374                    from moleculekit/xtc_utils/xtc.cpp:1126:
2023-07-31T12:57:35,374   /tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-07-31T12:57:35,374      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-07-31T12:57:35,374         |  ^~~~~~~
2023-07-31T12:57:55,380   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:57:55,697   building 'moleculekit.tmalign' extension
2023-07-31T12:57:55,698   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign
2023-07-31T12:57:55,699   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-07-31T12:57:55,700   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o -w
2023-07-31T12:58:25,053   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-rpa81xo2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -w
2023-07-31T12:58:43,435   In file included from /usr/include/c++/10/vector:72,
2023-07-31T12:58:43,436                    from moleculekit/tmalign/tmalign_util.cpp:1137:
2023-07-31T12:58:43,436   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-07-31T12:58:43,436   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-07-31T12:58:43,436     426 |       vector<_Tp, _Alloc>::
2023-07-31T12:58:43,436         |       ^~~~~~~~~~~~~~~~~~~
2023-07-31T12:58:44,015   In file included from /usr/include/c++/10/vector:67,
2023-07-31T12:58:44,015                    from moleculekit/tmalign/tmalign_util.cpp:1137:
2023-07-31T12:58:44,015   /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’:
2023-07-31T12:58:44,015   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-07-31T12:58:44,015    1198 |    _M_realloc_insert(end(), __x);
2023-07-31T12:58:44,016         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-07-31T12:58:44,016   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-07-31T12:58:44,016    1198 |    _M_realloc_insert(end(), __x);
2023-07-31T12:58:44,016         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-07-31T12:58:44,017   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-07-31T12:58:44,017    1198 |    _M_realloc_insert(end(), __x);
2023-07-31T12:58:44,017         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-07-31T12:58:46,438   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so
2023-07-31T12:58:46,884   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-07-31T12:58:46,884   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.7.7'
2023-07-31T12:58:46,884   installing to build/bdist.linux-armv7l/wheel
2023-07-31T12:58:46,885   running install
2023-07-31T12:58:46,910   running install_lib
2023-07-31T12:58:46,917   creating build/bdist.linux-armv7l
2023-07-31T12:58:46,917   creating build/bdist.linux-armv7l/wheel
2023-07-31T12:58:46,919   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:46,920   copying build/lib.linux-armv7l-cpython-39/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:46,922   copying build/lib.linux-armv7l-cpython-39/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:46,924   copying build/lib.linux-armv7l-cpython-39/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:46,926   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:46,927   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:46,952   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:46,973   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:47,004   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-07-31T12:58:47,005   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-07-31T12:58:47,024   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-07-31T12:58:47,027   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-07-31T12:58:47,028   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-07-31T12:58:47,030   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-07-31T12:58:47,049   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:47,052   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-07-31T12:58:47,053   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-07-31T12:58:47,055   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-07-31T12:58:47,075   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-07-31T12:58:47,076   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-07-31T12:58:47,101   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-07-31T12:58:47,103   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:47,105   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-07-31T12:58:47,128   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,152   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,154   copying build/lib.linux-armv7l-cpython-39/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,158   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,161   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,163   copying build/lib.linux-armv7l-cpython-39/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,166   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,166   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,169   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,171   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,173   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,176   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,178   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,180   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,182   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,184   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,187   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,188   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,190   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,192   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,195   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,197   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-07-31T12:58:47,200   copying build/lib.linux-armv7l-cpython-39/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,202   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-07-31T12:58:47,202   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-07-31T12:58:47,205   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-07-31T12:58:47,232   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,234   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-07-31T12:58:47,235   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-07-31T12:58:47,237   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-07-31T12:58:47,263   copying build/lib.linux-armv7l-cpython-39/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,265   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-07-31T12:58:47,266   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-07-31T12:58:47,268   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-07-31T12:58:47,270   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-07-31T12:58:47,287   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-07-31T12:58:47,288   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-07-31T12:58:47,294   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-07-31T12:58:47,295   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-07-31T12:58:47,297   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,329   copying build/lib.linux-armv7l-cpython-39/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,332   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,418   copying build/lib.linux-armv7l-cpython-39/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,420   copying build/lib.linux-armv7l-cpython-39/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,422   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,424   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-07-31T12:58:47,425   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-07-31T12:58:47,446   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-07-31T12:58:47,447   copying build/lib.linux-armv7l-cpython-39/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,449   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,469   copying build/lib.linux-armv7l-cpython-39/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,471   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,490   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,491   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,493   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,495   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,497   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,499   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-07-31T12:58:47,500   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-07-31T12:58:47,502   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-07-31T12:58:47,505   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-07-31T12:58:47,506   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-07-31T12:58:47,508   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,510   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-07-31T12:58:47,513   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,546   copying build/lib.linux-armv7l-cpython-39/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,548   copying build/lib.linux-armv7l-cpython-39/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,550   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-07-31T12:58:47,552   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-07-31T12:58:47,553   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-07-31T12:58:47,556   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-07-31T12:58:47,559   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-07-31T12:58:47,562   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-07-31T12:58:47,563   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-07-31T12:58:47,565   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-07-31T12:58:47,566   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-07-31T12:58:47,569   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-07-31T12:58:47,571   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-07-31T12:58:47,572   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-07-31T12:58:47,575   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-07-31T12:58:47,578   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-07-31T12:58:47,580   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-07-31T12:58:47,582   copying build/lib.linux-armv7l-cpython-39/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,585   copying build/lib.linux-armv7l-cpython-39/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,587   copying build/lib.linux-armv7l-cpython-39/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:47,593   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,594   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,597   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,599   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,602   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,605   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,608   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,611   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,613   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,616   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,618   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,621   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-07-31T12:58:47,622   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-07-31T12:58:47,625   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-07-31T12:58:47,627   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,629   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,633   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-07-31T12:58:47,636   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-07-31T12:58:47,636   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-07-31T12:58:47,657   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-07-31T12:58:47,660   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-07-31T12:58:47,661   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-07-31T12:58:47,870   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-07-31T12:58:47,873   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,874   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,876   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,877   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,879   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,881   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,883   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,885   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,887   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,889   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,892   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,893   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,895   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,897   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,899   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,901   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,903   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,905   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,907   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,909   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,911   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,913   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,915   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,917   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,919   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,921   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,923   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,925   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,927   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,929   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,931   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,933   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,935   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,937   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,939   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,941   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,942   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,944   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,946   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,948   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,950   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,951   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,953   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,955   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,957   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,959   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,961   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,962   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,964   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,966   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,968   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,970   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,972   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,974   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,976   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,978   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,979   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,981   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,983   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,985   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,987   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,989   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,991   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,993   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,995   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,996   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:47,998   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,000   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,002   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,004   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,006   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,007   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,009   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,011   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,013   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,015   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,017   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,019   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,020   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,022   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,025   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,027   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,030   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,032   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,035   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,037   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,039   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,041   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,042   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,044   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,047   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,049   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,051   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,053   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,055   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,056   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,058   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,060   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,062   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,064   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,066   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,068   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,069   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,071   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,073   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,075   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,077   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,079   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,081   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,082   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,084   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,086   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,087   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,089   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,091   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,093   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,094   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,096   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,098   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,100   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,101   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,103   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,105   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,106   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,108   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,110   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,112   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,113   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,115   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,117   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,119   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,120   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,122   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,124   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,125   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,127   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,129   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,131   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,133   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,134   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,136   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,138   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,140   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,142   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,144   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,145   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,147   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,149   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,151   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,153   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,154   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,156   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,158   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,160   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,161   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,163   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,165   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,167   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,168   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,170   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,172   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,174   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,176   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,177   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,179   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,181   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,183   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,184   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,186   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,189   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,190   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,193   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,195   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,196   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,198   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,200   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-07-31T12:58:48,202   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-07-31T12:58:48,204   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-07-31T12:58:48,205   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-07-31T12:58:48,207   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-07-31T12:58:48,210   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-07-31T12:58:48,211   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-07-31T12:58:48,213   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-07-31T12:58:48,216   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-07-31T12:58:48,217   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-07-31T12:58:48,221   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-07-31T12:58:48,222   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-07-31T12:58:48,224   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-07-31T12:58:48,226   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-07-31T12:58:48,230   copying build/lib.linux-armv7l-cpython-39/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:48,233   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-07-31T12:58:48,262   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-07-31T12:58:48,263   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-07-31T12:58:48,282   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-07-31T12:58:48,285   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-07-31T12:58:48,285   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-07-31T12:58:48,307   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-07-31T12:58:48,310   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-07-31T12:58:48,311   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-07-31T12:58:48,313   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-07-31T12:58:48,315   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-07-31T12:58:48,318   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-07-31T12:58:48,321   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-07-31T12:58:48,322   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-07-31T12:58:48,324   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-07-31T12:58:48,326   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-07-31T12:58:48,328   running install_egg_info
2023-07-31T12:58:48,334   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.7.7-py3.9.egg-info
2023-07-31T12:58:48,347   running install_scripts
2023-07-31T12:58:48,396   creating build/bdist.linux-armv7l/wheel/moleculekit-1.7.7.dist-info/WHEEL
2023-07-31T12:58:48,399   creating '/tmp/pip-wheel-xlnsgalm/.tmp-ggq2ryki/moleculekit-1.7.7-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-07-31T12:58:48,402   adding 'moleculekit/__init__.py'
2023-07-31T12:58:48,403   adding 'moleculekit/_version.py'
2023-07-31T12:58:48,405   adding 'moleculekit/align.py'
2023-07-31T12:58:48,719   adding 'moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:48,731   adding 'moleculekit/bondguesser.py'
2023-07-31T12:58:48,971   adding 'moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:48,980   adding 'moleculekit/config.py'
2023-07-31T12:58:48,981   adding 'moleculekit/dihedral.py'
2023-07-31T12:58:48,982   adding 'moleculekit/distance.py'
2023-07-31T12:58:49,288   adding 'moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:49,299   adding 'moleculekit/home.py'
2023-07-31T12:58:49,301   adding 'moleculekit/logging.ini'
2023-07-31T12:58:49,314   adding 'moleculekit/molecule.py'
2023-07-31T12:58:49,537   adding 'moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:49,546   adding 'moleculekit/opm.py'
2023-07-31T12:58:49,548   adding 'moleculekit/periodictable.py'
2023-07-31T12:58:49,549   adding 'moleculekit/pymolgraphics.py'
2023-07-31T12:58:49,551   adding 'moleculekit/rcsb.py'
2023-07-31T12:58:49,552   adding 'moleculekit/rdkitintegration.py'
2023-07-31T12:58:49,564   adding 'moleculekit/readers.py'
2023-07-31T12:58:50,169   adding 'moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:50,193   adding 'moleculekit/util.py'
2023-07-31T12:58:50,194   adding 'moleculekit/version.py'
2023-07-31T12:58:50,196   adding 'moleculekit/viewer.py'
2023-07-31T12:58:50,197   adding 'moleculekit/vmd_wrapper'
2023-07-31T12:58:50,199   adding 'moleculekit/vmdgraphics.py'
2023-07-31T12:58:50,201   adding 'moleculekit/vmdviewer.py'
2023-07-31T12:58:50,432   adding 'moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:50,445   adding 'moleculekit/writers.py'
2023-07-31T12:58:50,710   adding 'moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:50,720   adding 'moleculekit/atomselect/__init__.py'
2023-07-31T12:58:50,722   adding 'moleculekit/atomselect/analyze.py'
2023-07-31T12:58:50,724   adding 'moleculekit/atomselect/atomselect.py'
2023-07-31T12:58:50,726   adding 'moleculekit/atomselect/languageparser.py'
2023-07-31T12:58:50,828   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-07-31T12:58:50,839   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-07-31T12:58:50,928   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-07-31T12:58:50,937   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-07-31T12:58:51,032   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-07-31T12:58:51,042   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-07-31T12:58:51,044   adding 'moleculekit/interactions/__init__.py'
2023-07-31T12:58:51,324   adding 'moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:51,590   adding 'moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:51,601   adding 'moleculekit/interactions/interactions.py'
2023-07-31T12:58:51,881   adding 'moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:52,166   adding 'moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so'
2023-07-31T12:58:52,264   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-07-31T12:58:52,273   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-07-31T12:58:52,361   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-07-31T12:58:52,370   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-07-31T12:58:52,459   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-07-31T12:58:52,468   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-07-31T12:58:52,557   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-07-31T12:58:52,566   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-07-31T12:58:52,650   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-07-31T12:58:52,659   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-07-31T12:58:52,660   adding 'moleculekit/pdbx/__init__.py'
2023-07-31T12:58:52,664   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-07-31T12:58:52,667   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-07-31T12:58:52,669   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-07-31T12:58:52,670   adding 'moleculekit/pdbx/reader/__init__.py'
2023-07-31T12:58:52,673   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-07-31T12:58:52,674   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-07-31T12:58:52,676   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-07-31T12:58:52,677   adding 'moleculekit/pdbx/tests/__init__.py'
2023-07-31T12:58:52,679   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-07-31T12:58:52,680   adding 'moleculekit/pdbx/writer/__init__.py'
2023-07-31T12:58:52,682   adding 'moleculekit/ply/__init__.py'
2023-07-31T12:58:52,686   adding 'moleculekit/ply/lex.py'
2023-07-31T12:58:52,698   adding 'moleculekit/ply/yacc.py'
2023-07-31T12:58:52,700   adding 'moleculekit/projections/__init__.py'
2023-07-31T12:58:52,702   adding 'moleculekit/projections/metriccoordinate.py'
2023-07-31T12:58:52,706   adding 'moleculekit/projections/metricdihedral.py'
2023-07-31T12:58:52,710   adding 'moleculekit/projections/metricdistance.py'
2023-07-31T12:58:52,712   adding 'moleculekit/projections/metricfluctuation.py'
2023-07-31T12:58:52,714   adding 'moleculekit/projections/metricgyration.py'
2023-07-31T12:58:52,718   adding 'moleculekit/projections/metricplumed2.py'
2023-07-31T12:58:52,719   adding 'moleculekit/projections/metricrmsd.py'
2023-07-31T12:58:52,721   adding 'moleculekit/projections/metricsasa.py'
2023-07-31T12:58:52,724   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-07-31T12:58:52,725   adding 'moleculekit/projections/metricshell.py'
2023-07-31T12:58:52,727   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-07-31T12:58:52,729   adding 'moleculekit/projections/metrictmscore.py'
2023-07-31T12:58:52,730   adding 'moleculekit/projections/projection.py'
2023-07-31T12:58:52,732   adding 'moleculekit/projections/util.py'
2023-07-31T12:58:52,734   adding 'moleculekit/share/ALA.cif'
2023-07-31T12:58:52,735   adding 'moleculekit/share/backbone.cif'
2023-07-31T12:58:54,038   adding 'moleculekit/share/opm_sequences.json'
2023-07-31T12:58:54,123   adding 'moleculekit/share/atomselect/atomselect.json'
2023-07-31T12:58:54,128   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-07-31T12:58:54,130   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-07-31T12:58:54,131   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-07-31T12:58:54,132   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-07-31T12:58:54,133   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-07-31T12:58:54,135   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-07-31T12:58:54,136   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-07-31T12:58:54,137   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-07-31T12:58:54,139   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-07-31T12:58:54,140   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-07-31T12:58:54,141   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-07-31T12:58:54,142   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-07-31T12:58:54,144   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-07-31T12:58:54,145   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-07-31T12:58:54,146   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-07-31T12:58:54,147   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-07-31T12:58:54,149   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-07-31T12:58:54,150   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-07-31T12:58:54,151   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-07-31T12:58:54,152   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-07-31T12:58:54,154   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-07-31T12:58:54,155   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-07-31T12:58:54,156   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-07-31T12:58:54,157   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-07-31T12:58:54,159   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-07-31T12:58:54,160   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-07-31T12:58:54,161   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-07-31T12:58:54,163   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-07-31T12:58:54,164   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-07-31T12:58:54,165   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-07-31T12:58:54,166   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-07-31T12:58:54,167   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-07-31T12:58:54,169   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-07-31T12:58:54,170   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-07-31T12:58:54,172   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-07-31T12:58:54,173   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-07-31T12:58:54,174   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-07-31T12:58:54,175   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-07-31T12:58:54,177   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-07-31T12:58:54,178   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-07-31T12:58:54,179   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-07-31T12:58:54,180   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-07-31T12:58:54,182   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-07-31T12:58:54,183   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-07-31T12:58:54,184   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-07-31T12:58:54,186   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-07-31T12:58:54,187   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-07-31T12:58:54,188   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-07-31T12:58:54,189   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-07-31T12:58:54,191   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-07-31T12:58:54,192   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-07-31T12:58:54,193   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-07-31T12:58:54,194   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-07-31T12:58:54,195   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-07-31T12:58:54,197   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-07-31T12:58:54,198   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-07-31T12:58:54,199   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-07-31T12:58:54,200   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-07-31T12:58:54,201   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-07-31T12:58:54,203   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-07-31T12:58:54,204   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-07-31T12:58:54,205   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-07-31T12:58:54,206   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-07-31T12:58:54,207   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-07-31T12:58:54,209   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-07-31T12:58:54,210   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-07-31T12:58:54,211   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-07-31T12:58:54,213   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-07-31T12:58:54,214   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-07-31T12:58:54,215   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-07-31T12:58:54,216   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-07-31T12:58:54,217   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-07-31T12:58:54,219   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-07-31T12:58:54,220   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-07-31T12:58:54,221   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-07-31T12:58:54,222   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-07-31T12:58:54,224   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-07-31T12:58:54,225   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-07-31T12:58:54,226   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-07-31T12:58:54,227   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-07-31T12:58:54,228   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-07-31T12:58:54,230   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-07-31T12:58:54,231   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-07-31T12:58:54,232   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-07-31T12:58:54,233   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-07-31T12:58:54,235   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-07-31T12:58:54,236   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-07-31T12:58:54,237   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-07-31T12:58:54,238   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-07-31T12:58:54,240   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-07-31T12:58:54,241   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-07-31T12:58:54,242   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-07-31T12:58:54,243   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-07-31T12:58:54,245   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-07-31T12:58:54,246   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-07-31T12:58:54,247   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-07-31T12:58:54,248   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-07-31T12:58:54,250   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-07-31T12:58:54,251   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-07-31T12:58:54,252   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-07-31T12:58:54,253   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-07-31T12:58:54,254   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-07-31T12:58:54,256   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-07-31T12:58:54,257   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-07-31T12:58:54,258   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-07-31T12:58:54,259   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-07-31T12:58:54,261   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-07-31T12:58:54,262   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-07-31T12:58:54,263   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-07-31T12:58:54,264   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-07-31T12:58:54,265   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-07-31T12:58:54,267   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-07-31T12:58:54,268   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-07-31T12:58:54,269   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-07-31T12:58:54,271   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-07-31T12:58:54,272   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-07-31T12:58:54,275   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-07-31T12:58:54,276   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-07-31T12:58:54,278   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-07-31T12:58:54,279   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-07-31T12:58:54,281   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-07-31T12:58:54,282   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-07-31T12:58:54,283   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-07-31T12:58:54,284   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-07-31T12:58:54,285   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-07-31T12:58:54,287   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-07-31T12:58:54,288   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-07-31T12:58:54,289   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-07-31T12:58:54,291   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-07-31T12:58:54,292   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-07-31T12:58:54,293   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-07-31T12:58:54,294   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-07-31T12:58:54,296   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-07-31T12:58:54,297   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-07-31T12:58:54,298   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-07-31T12:58:54,299   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-07-31T12:58:54,301   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-07-31T12:58:54,302   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-07-31T12:58:54,303   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-07-31T12:58:54,304   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-07-31T12:58:54,306   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-07-31T12:58:54,307   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-07-31T12:58:54,308   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-07-31T12:58:54,309   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-07-31T12:58:54,311   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-07-31T12:58:54,312   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-07-31T12:58:54,313   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-07-31T12:58:54,314   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-07-31T12:58:54,316   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-07-31T12:58:54,317   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-07-31T12:58:54,318   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-07-31T12:58:54,320   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-07-31T12:58:54,321   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-07-31T12:58:54,322   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-07-31T12:58:54,324   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-07-31T12:58:54,325   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-07-31T12:58:54,326   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-07-31T12:58:54,327   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-07-31T12:58:54,329   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-07-31T12:58:54,330   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-07-31T12:58:54,331   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-07-31T12:58:54,332   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-07-31T12:58:54,334   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-07-31T12:58:54,335   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-07-31T12:58:54,336   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-07-31T12:58:54,337   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-07-31T12:58:54,339   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-07-31T12:58:54,340   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-07-31T12:58:54,341   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-07-31T12:58:54,342   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-07-31T12:58:54,344   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-07-31T12:58:54,345   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-07-31T12:58:54,346   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-07-31T12:58:54,347   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-07-31T12:58:54,349   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-07-31T12:58:54,350   adding 'moleculekit/smallmol/__init__.py'
2023-07-31T12:58:54,355   adding 'moleculekit/smallmol/smallmol.py'
2023-07-31T12:58:54,358   adding 'moleculekit/smallmol/smallmollib.py'
2023-07-31T12:58:54,360   adding 'moleculekit/smallmol/test_smallmol.py'
2023-07-31T12:58:54,361   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-07-31T12:58:54,363   adding 'moleculekit/smallmol/util.py'
2023-07-31T12:58:54,365   adding 'moleculekit/smallmol/tools/__init__.py'
2023-07-31T12:58:54,367   adding 'moleculekit/smallmol/tools/clustering.py'
2023-07-31T12:58:54,368   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-07-31T12:58:54,370   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-07-31T12:58:54,457   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-07-31T12:58:54,466   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-07-31T12:58:54,467   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-07-31T12:58:54,469   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-07-31T12:58:54,486   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-07-31T12:58:54,490   adding 'moleculekit/tools/__init__.py'
2023-07-31T12:58:54,492   adding 'moleculekit/tools/atomtyper.py'
2023-07-31T12:58:54,494   adding 'moleculekit/tools/autosegment.py'
2023-07-31T12:58:54,496   adding 'moleculekit/tools/crystalpacking.py'
2023-07-31T12:58:54,498   adding 'moleculekit/tools/detect.py'
2023-07-31T12:58:54,500   adding 'moleculekit/tools/docking.py'
2023-07-31T12:58:54,502   adding 'moleculekit/tools/graphalignment.py'
2023-07-31T12:58:54,504   adding 'moleculekit/tools/hhblitsprofile.py'
2023-07-31T12:58:54,505   adding 'moleculekit/tools/moleculechecks.py'
2023-07-31T12:58:54,512   adding 'moleculekit/tools/preparation.py'
2023-07-31T12:58:54,514   adding 'moleculekit/tools/preparation_customres.py'
2023-07-31T12:58:54,516   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-07-31T12:58:54,519   adding 'moleculekit/tools/voxeldescriptors.py'
2023-07-31T12:58:54,521   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-07-31T12:58:54,522   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-07-31T12:58:54,608   adding 'moleculekit/wrapping/wrapping.cpp'
2023-07-31T12:58:54,616   adding 'moleculekit/wrapping/wrapping.pyx'
2023-07-31T12:58:54,703   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-07-31T12:58:54,712   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-07-31T12:58:54,713   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-07-31T12:58:54,716   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-07-31T12:58:54,718   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-07-31T12:58:54,719   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-07-31T12:58:54,726   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-07-31T12:58:54,728   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-07-31T12:58:54,730   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-07-31T12:58:54,732   adding 'moleculekit-1.7.7.dist-info/LICENSE'
2023-07-31T12:58:54,734   adding 'moleculekit-1.7.7.dist-info/METADATA'
2023-07-31T12:58:54,735   adding 'moleculekit-1.7.7.dist-info/WHEEL'
2023-07-31T12:58:54,736   adding 'moleculekit-1.7.7.dist-info/top_level.txt'
2023-07-31T12:58:54,741   adding 'moleculekit-1.7.7.dist-info/RECORD'
2023-07-31T12:58:54,878   removing build/bdist.linux-armv7l/wheel
2023-07-31T12:58:55,136   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-07-31T12:58:55,406   Created wheel for moleculekit: filename=moleculekit-1.7.7-cp39-cp39-linux_armv7l.whl size=12465850 sha256=a91a34606e0519960ade59e824acf3ed04563b9d1e093314a657f5e5670f254f
2023-07-31T12:58:55,408   Stored in directory: /tmp/pip-ephem-wheel-cache-02t156h_/wheels/5e/c0/33/adbc046421a65a7fde26adecc0a50420e1a80550ed87950034
2023-07-31T12:58:55,434 Successfully built moleculekit
2023-07-31T12:58:55,734 Removed build tracker: '/tmp/pip-build-tracker-h0or316q'