2023-08-02T23:08:43,634 Created temporary directory: /tmp/pip-build-tracker-h_xcgspo 2023-08-02T23:08:43,635 Initialized build tracking at /tmp/pip-build-tracker-h_xcgspo 2023-08-02T23:08:43,635 Created build tracker: /tmp/pip-build-tracker-h_xcgspo 2023-08-02T23:08:43,635 Entered build tracker: /tmp/pip-build-tracker-h_xcgspo 2023-08-02T23:08:43,636 Created temporary directory: /tmp/pip-wheel-az0lem6z 2023-08-02T23:08:43,639 Created temporary directory: /tmp/pip-ephem-wheel-cache-t16o5csv 2023-08-02T23:08:43,662 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-02T23:08:43,665 2 location(s) to search for versions of scikit-bio: 2023-08-02T23:08:43,665 * https://pypi.org/simple/scikit-bio/ 2023-08-02T23:08:43,665 * https://www.piwheels.org/simple/scikit-bio/ 2023-08-02T23:08:43,666 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2023-08-02T23:08:43,666 Getting page https://pypi.org/simple/scikit-bio/ 2023-08-02T23:08:43,668 Found index url https://pypi.org/simple/ 2023-08-02T23:08:43,717 Fetched page https://pypi.org/simple/scikit-bio/ as application/vnd.pypi.simple.v1+json 2023-08-02T23:08:43,722 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2023-08-02T23:08:43,722 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2023-08-02T23:08:43,723 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2023-08-02T23:08:43,723 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2023-08-02T23:08:43,723 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2023-08-02T23:08:43,724 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2023-08-02T23:08:43,724 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2023-08-02T23:08:43,724 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2023-08-02T23:08:43,724 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2023-08-02T23:08:43,725 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2023-08-02T23:08:43,725 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2023-08-02T23:08:43,725 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2023-08-02T23:08:43,725 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2023-08-02T23:08:43,726 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2023-08-02T23:08:43,726 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2023-08-02T23:08:43,726 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2023-08-02T23:08:43,727 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2023-08-02T23:08:43,727 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2023-08-02T23:08:43,727 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2023-08-02T23:08:43,727 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2023-08-02T23:08:43,728 Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.7 2023-08-02T23:08:43,728 Found link https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.8 2023-08-02T23:08:43,729 Found link https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.9 2023-08-02T23:08:43,729 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/ 2023-08-02T23:08:43,729 Getting page https://www.piwheels.org/simple/scikit-bio/ 2023-08-02T23:08:43,730 Found index url https://www.piwheels.org/simple/ 2023-08-02T23:08:43,889 Fetched page https://www.piwheels.org/simple/scikit-bio/ as text/html 2023-08-02T23:08:43,893 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv7l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,893 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv6l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,893 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,894 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv6l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,894 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,894 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,894 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,894 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,895 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,895 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,895 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,895 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2023-08-02T23:08:43,895 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/ 2023-08-02T23:08:43,896 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2023-08-02T23:08:43,916 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2023-08-02T23:08:43,934 Collecting scikit-bio==0.5.9 2023-08-02T23:08:43,936 Created temporary directory: /tmp/pip-unpack-6ay9kne_ 2023-08-02T23:08:43,979 Downloading scikit-bio-0.5.9.tar.gz (3.5 MB) 2023-08-02T23:08:45,755 Added scikit-bio==0.5.9 from https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz to build tracker '/tmp/pip-build-tracker-h_xcgspo' 2023-08-02T23:08:45,761 Created temporary directory: /tmp/pip-build-env-baxo3t3w 2023-08-02T23:08:45,771 Installing build dependencies: started 2023-08-02T23:08:45,772 Running command pip subprocess to install build dependencies 2023-08-02T23:08:46,955 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-08-02T23:08:47,307 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-02T23:08:49,019 Collecting Cython>=0.29.32 2023-08-02T23:08:49,800 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.0-cp39-cp39-linux_armv7l.whl (10.6 MB) 2023-08-02T23:08:50,201 Collecting oldest-supported-numpy 2023-08-02T23:08:50,219 Using cached https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2022.11.19-py3-none-any.whl (4.9 kB) 2023-08-02T23:08:51,650 Collecting setuptools 2023-08-02T23:08:51,715 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-08-02T23:08:51,963 Collecting wheel 2023-08-02T23:08:51,980 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.0-py3-none-any.whl (64 kB) 2023-08-02T23:08:53,462 Collecting numpy==1.19.3 (from oldest-supported-numpy) 2023-08-02T23:08:54,201 Using cached https://www.piwheels.org/simple/numpy/numpy-1.19.3-cp39-cp39-linux_armv7l.whl (10.5 MB) 2023-08-02T23:08:56,449 Installing collected packages: wheel, setuptools, numpy, Cython, oldest-supported-numpy 2023-08-02T23:08:56,668 Creating /tmp/pip-build-env-baxo3t3w/overlay/bin 2023-08-02T23:08:56,670 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/wheel to 755 2023-08-02T23:09:05,046 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/f2py to 755 2023-08-02T23:09:05,048 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/f2py3 to 755 2023-08-02T23:09:05,050 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/f2py3.9 to 755 2023-08-02T23:09:08,410 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/cygdb to 755 2023-08-02T23:09:08,412 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/cython to 755 2023-08-02T23:09:08,414 changing mode of /tmp/pip-build-env-baxo3t3w/overlay/bin/cythonize to 755 2023-08-02T23:09:08,456 Successfully installed Cython-3.0.0 numpy-1.19.3 oldest-supported-numpy-2022.11.19 setuptools-68.0.0 wheel-0.41.0 2023-08-02T23:09:08,470 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-08-02T23:09:08,471 [notice] To update, run: python3 -m pip install --upgrade pip 2023-08-02T23:09:08,854 Installing build dependencies: finished with status 'done' 2023-08-02T23:09:08,864 Getting requirements to build wheel: started 2023-08-02T23:09:08,865 Running command Getting requirements to build wheel 2023-08-02T23:09:09,753 running egg_info 2023-08-02T23:09:09,759 writing scikit_bio.egg-info/PKG-INFO 2023-08-02T23:09:09,762 writing dependency_links to scikit_bio.egg-info/dependency_links.txt 2023-08-02T23:09:09,764 writing requirements to scikit_bio.egg-info/requires.txt 2023-08-02T23:09:09,765 writing top-level names to scikit_bio.egg-info/top_level.txt 2023-08-02T23:09:10,059 reading manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:09:10,083 reading manifest template 'MANIFEST.in' 2023-08-02T23:09:10,126 no previously-included directories found matching 'doc/build' 2023-08-02T23:09:10,128 no previously-included directories found matching 'doc/source/generated' 2023-08-02T23:09:10,133 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-08-02T23:09:10,138 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-08-02T23:09:10,143 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-08-02T23:09:10,146 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-08-02T23:09:10,150 warning: no previously-included files matching '.coverage' found anywhere in distribution 2023-08-02T23:09:10,151 adding license file 'LICENSE.txt' 2023-08-02T23:09:10,197 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:09:10,307 Getting requirements to build wheel: finished with status 'done' 2023-08-02T23:09:10,316 Created temporary directory: /tmp/pip-modern-metadata-lz84euci 2023-08-02T23:09:10,319 Preparing metadata (pyproject.toml): started 2023-08-02T23:09:10,320 Running command Preparing metadata (pyproject.toml) 2023-08-02T23:09:11,126 running dist_info 2023-08-02T23:09:11,146 creating /tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info 2023-08-02T23:09:11,152 writing /tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/PKG-INFO 2023-08-02T23:09:11,154 writing dependency_links to /tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/dependency_links.txt 2023-08-02T23:09:11,157 writing requirements to /tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/requires.txt 2023-08-02T23:09:11,158 writing top-level names to /tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/top_level.txt 2023-08-02T23:09:11,159 writing manifest file '/tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:09:11,435 reading manifest file '/tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:09:11,437 reading manifest template 'MANIFEST.in' 2023-08-02T23:09:11,478 no previously-included directories found matching 'doc/build' 2023-08-02T23:09:11,480 no previously-included directories found matching 'doc/source/generated' 2023-08-02T23:09:11,483 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-08-02T23:09:11,487 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-08-02T23:09:11,490 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-08-02T23:09:11,493 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-08-02T23:09:11,496 warning: no previously-included files matching '.coverage' found anywhere in distribution 2023-08-02T23:09:11,496 adding license file 'LICENSE.txt' 2023-08-02T23:09:11,532 writing manifest file '/tmp/pip-modern-metadata-lz84euci/scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:09:11,534 creating '/tmp/pip-modern-metadata-lz84euci/scikit_bio-0.5.9.dist-info' 2023-08-02T23:09:11,727 Preparing metadata (pyproject.toml): finished with status 'done' 2023-08-02T23:09:11,734 Source in /tmp/pip-wheel-az0lem6z/scikit-bio_ffbf532008554c2cad1cec02e475b0c2 has version 0.5.9, which satisfies requirement scikit-bio==0.5.9 from https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz 2023-08-02T23:09:11,735 Removed scikit-bio==0.5.9 from https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz from build tracker '/tmp/pip-build-tracker-h_xcgspo' 2023-08-02T23:09:11,740 Created temporary directory: /tmp/pip-unpack-csh06u6j 2023-08-02T23:09:11,741 Building wheels for collected packages: scikit-bio 2023-08-02T23:09:11,745 Created temporary directory: /tmp/pip-wheel-hptj0xuc 2023-08-02T23:09:11,745 Destination directory: /tmp/pip-wheel-hptj0xuc 2023-08-02T23:09:11,750 Building wheel for scikit-bio (pyproject.toml): started 2023-08-02T23:09:11,751 Running command Building wheel for scikit-bio (pyproject.toml) 2023-08-02T23:09:12,567 running bdist_wheel 2023-08-02T23:09:12,757 running build 2023-08-02T23:09:12,757 running build_py 2023-08-02T23:09:12,766 creating build 2023-08-02T23:09:12,766 creating build/lib.linux-armv7l-cpython-39 2023-08-02T23:09:12,767 creating build/lib.linux-armv7l-cpython-39/skbio 2023-08-02T23:09:12,768 copying skbio/workflow.py -> build/lib.linux-armv7l-cpython-39/skbio 2023-08-02T23:09:12,771 copying skbio/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio 2023-08-02T23:09:12,772 copying skbio/test.py -> build/lib.linux-armv7l-cpython-39/skbio 2023-08-02T23:09:12,774 copying skbio/_base.py -> build/lib.linux-armv7l-cpython-39/skbio 2023-08-02T23:09:12,776 creating build/lib.linux-armv7l-cpython-39/skbio/tree 2023-08-02T23:09:12,777 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2023-08-02T23:09:12,778 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2023-08-02T23:09:12,780 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2023-08-02T23:09:12,782 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2023-08-02T23:09:12,786 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2023-08-02T23:09:12,789 creating build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,790 copying skbio/util/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,791 copying skbio/util/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,794 copying skbio/util/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,795 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,797 copying skbio/util/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,799 copying skbio/util/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2023-08-02T23:09:12,801 creating build/lib.linux-armv7l-cpython-39/skbio/diversity 2023-08-02T23:09:12,802 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2023-08-02T23:09:12,805 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2023-08-02T23:09:12,807 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2023-08-02T23:09:12,809 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2023-08-02T23:09:12,812 creating build/lib.linux-armv7l-cpython-39/skbio/tests 2023-08-02T23:09:12,813 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-cpython-39/skbio/tests 2023-08-02T23:09:12,816 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/tests 2023-08-02T23:09:12,817 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tests 2023-08-02T23:09:12,819 creating build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,820 copying skbio/io/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,822 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,824 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,826 copying skbio/io/util.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,828 copying skbio/io/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,830 copying skbio/io/registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,833 copying skbio/io/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2023-08-02T23:09:12,835 creating build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,836 copying skbio/stats/composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,839 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,842 copying skbio/stats/power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,845 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,846 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,848 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:12,850 creating build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,851 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,853 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,855 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,858 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,860 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,863 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,865 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,867 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,871 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,873 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2023-08-02T23:09:12,876 creating build/lib.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:12,876 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:12,879 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:12,882 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:12,885 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:12,890 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:12,893 creating build/lib.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:12,894 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:12,896 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:12,900 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:12,902 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:12,904 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:12,907 creating build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2023-08-02T23:09:12,908 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2023-08-02T23:09:12,910 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2023-08-02T23:09:12,912 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2023-08-02T23:09:12,916 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2023-08-02T23:09:12,918 creating build/lib.linux-armv7l-cpython-39/skbio/util/tests 2023-08-02T23:09:12,919 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2023-08-02T23:09:12,921 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2023-08-02T23:09:12,923 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2023-08-02T23:09:12,925 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2023-08-02T23:09:12,927 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta 2023-08-02T23:09:12,928 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta 2023-08-02T23:09:12,931 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta 2023-08-02T23:09:12,933 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2023-08-02T23:09:12,934 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2023-08-02T23:09:12,936 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2023-08-02T23:09:12,938 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2023-08-02T23:09:12,940 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2023-08-02T23:09:12,943 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,944 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,946 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,948 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,950 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,952 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,954 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,956 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2023-08-02T23:09:12,958 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests 2023-08-02T23:09:12,959 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests 2023-08-02T23:09:12,961 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests 2023-08-02T23:09:12,965 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,965 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,968 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,970 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,972 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,974 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,975 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,977 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2023-08-02T23:09:12,980 creating build/lib.linux-armv7l-cpython-39/skbio/io/tests 2023-08-02T23:09:12,981 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2023-08-02T23:09:12,983 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2023-08-02T23:09:12,985 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2023-08-02T23:09:12,986 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2023-08-02T23:09:12,991 creating build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:12,992 copying skbio/io/format/embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:12,995 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:12,997 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:12,999 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,002 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,004 copying skbio/io/format/binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,006 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,008 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,010 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,012 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,014 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,016 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,019 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,021 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,023 copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,026 copying skbio/io/format/taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,028 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,030 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,032 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,035 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,037 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2023-08-02T23:09:13,040 creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,041 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,043 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,045 copying skbio/io/format/tests/test_binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,047 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,050 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,052 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,054 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,055 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,058 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,061 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,063 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,065 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,067 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,070 copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,073 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,075 copying skbio/io/format/tests/test_taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,077 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,079 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,081 copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,083 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2023-08-02T23:09:13,086 creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,087 copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,089 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,091 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,093 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,095 copying skbio/stats/distance/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,097 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,100 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,102 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:09:13,106 creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve 2023-08-02T23:09:13,107 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve 2023-08-02T23:09:13,109 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve 2023-08-02T23:09:13,112 creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,113 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,116 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,117 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,120 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,123 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,124 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2023-08-02T23:09:13,128 creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,129 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,131 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,134 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,136 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,138 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,141 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,143 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:13,146 creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,147 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,150 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,153 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,154 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,157 copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,160 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,162 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2023-08-02T23:09:13,164 creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests 2023-08-02T23:09:13,165 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests 2023-08-02T23:09:13,168 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests 2023-08-02T23:09:13,170 creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,171 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,173 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,175 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,178 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,180 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,181 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,184 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2023-08-02T23:09:13,187 creating build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,188 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,190 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,192 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,196 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,199 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,201 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,203 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,205 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,207 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2023-08-02T23:09:13,210 creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2023-08-02T23:09:13,211 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2023-08-02T23:09:13,213 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2023-08-02T23:09:13,215 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2023-08-02T23:09:13,218 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2023-08-02T23:09:13,221 creating build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2023-08-02T23:09:13,221 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2023-08-02T23:09:13,224 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2023-08-02T23:09:13,230 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2023-08-02T23:09:13,231 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2023-08-02T23:09:13,235 creating build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib 2023-08-02T23:09:13,236 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib 2023-08-02T23:09:13,281 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data 2023-08-02T23:09:13,281 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,283 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,285 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,287 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,289 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,291 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,293 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:09:13,295 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data 2023-08-02T23:09:13,295 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:09:13,296 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:09:13,299 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:09:13,301 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:09:13,302 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:09:13,305 creating build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,305 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,308 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,311 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,313 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,315 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,317 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,318 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,320 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2023-08-02T23:09:13,322 creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,323 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,325 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,327 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,329 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,331 copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,333 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,335 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,337 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,339 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,341 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,343 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,345 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,347 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,349 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,351 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,352 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,354 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,356 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,358 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,360 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,362 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,364 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,366 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,368 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,370 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,372 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,374 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,376 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,378 copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,380 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,382 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,383 copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,386 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,387 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,389 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,391 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,393 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,395 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,397 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,399 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,402 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,404 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,406 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,408 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,410 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,412 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,414 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,416 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,418 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,420 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,422 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,424 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,426 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,428 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,430 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,432 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,433 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,435 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,437 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,439 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,441 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,443 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,445 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,447 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,449 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,451 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,453 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,455 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,457 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,459 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,461 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,463 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,465 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,467 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,469 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,471 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,472 copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,474 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,476 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,478 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,480 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,482 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,484 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,486 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,488 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,490 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,491 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,493 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,495 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,497 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,499 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,501 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,503 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,505 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,507 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,509 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,511 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,514 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,515 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,517 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,519 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,521 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,523 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,525 copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,527 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,529 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,531 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,533 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,535 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,537 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,539 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,541 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,543 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,545 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,546 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,548 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,551 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,553 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,555 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,556 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,558 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,560 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,562 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,564 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,566 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,568 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,570 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,572 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,574 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,576 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,578 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,580 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,582 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,584 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,586 copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,587 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,589 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,591 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,593 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,595 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,597 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,599 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,601 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,603 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,605 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,607 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,609 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,611 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,613 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,615 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,617 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,619 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,621 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,623 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,625 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,627 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,629 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,631 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,633 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,635 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,637 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,639 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,641 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,643 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,645 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,646 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,649 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,651 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,653 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,655 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,657 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,659 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,661 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,663 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,665 copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,667 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,669 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,671 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,673 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,675 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,677 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,679 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,681 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,682 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,684 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,686 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,688 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,690 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,692 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,694 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,696 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,698 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,700 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,702 copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,704 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,706 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,708 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,710 copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,712 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,714 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,716 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,718 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,720 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,722 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,724 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,725 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,727 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,729 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,731 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,733 copying skbio/io/format/tests/data/taxdump_nodes.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,735 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,737 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,739 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,741 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,743 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,745 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,747 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,749 copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,751 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,753 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,755 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,757 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,759 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,761 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,763 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,765 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,766 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,768 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,770 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,772 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,774 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,776 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,778 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,780 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,783 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,785 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,787 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,789 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,791 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,793 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,794 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,797 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,799 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,801 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,803 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,805 copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,807 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,809 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,811 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,813 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,814 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,816 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,818 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,821 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,822 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,824 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,826 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,828 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,830 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,832 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,834 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,836 copying skbio/io/format/tests/data/taxdump_names.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,838 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,840 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,842 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,844 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,845 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,847 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,849 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,851 copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,854 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,856 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,858 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,860 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,862 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,864 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,866 copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,868 copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,870 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,872 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,874 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,876 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,878 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,880 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,882 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,884 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,886 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,888 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,890 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,892 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,894 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,896 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,898 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,900 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,901 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,903 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,905 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,907 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,909 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,911 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,913 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,915 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,917 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,919 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,921 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,923 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,925 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,928 copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,930 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,932 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,935 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,937 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,939 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,941 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,944 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,946 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,948 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,950 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,953 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,955 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,957 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,959 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,962 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,964 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,966 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,968 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,971 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,973 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,976 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,978 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,980 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,983 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,985 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,987 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,989 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2023-08-02T23:09:13,992 creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:13,993 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:13,996 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:13,998 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,000 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,002 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,005 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,007 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,009 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,012 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,014 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,016 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,018 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2023-08-02T23:09:14,020 creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,021 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,024 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,026 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,028 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,031 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,033 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,035 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,038 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,040 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,042 copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,045 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,048 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,051 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,053 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,055 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,057 copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,060 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,062 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,065 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,067 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,070 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,072 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,074 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,076 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2023-08-02T23:09:14,079 creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,080 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,082 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,084 copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,087 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,089 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,092 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,094 copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,096 copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,099 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,101 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,103 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,106 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,108 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,110 copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,113 copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,115 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,117 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,120 copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,122 copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,125 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,127 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,130 copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,132 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,134 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,137 copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,139 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,142 copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,144 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,147 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,149 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,151 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,154 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,156 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,158 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,161 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,163 copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,165 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,168 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,170 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,172 copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2023-08-02T23:09:14,195 running build_ext 2023-08-02T23:09:14,736 building 'skbio.metadata._intersection' extension 2023-08-02T23:09:14,737 creating build/temp.linux-armv7l-cpython-39 2023-08-02T23:09:14,738 creating build/temp.linux-armv7l-cpython-39/skbio 2023-08-02T23:09:14,739 creating build/temp.linux-armv7l-cpython-39/skbio/metadata 2023-08-02T23:09:14,740 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o 2023-08-02T23:09:23,617 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so 2023-08-02T23:09:23,756 building 'skbio.stats.__subsample' extension 2023-08-02T23:09:23,756 creating build/temp.linux-armv7l-cpython-39/skbio/stats 2023-08-02T23:09:23,757 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/__subsample.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/__subsample.o 2023-08-02T23:09:24,060 In file included from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2023-08-02T23:09:24,061 from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-08-02T23:09:24,061 from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-08-02T23:09:24,061 from skbio/stats/__subsample.c:768: 2023-08-02T23:09:24,061 /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-08-02T23:09:24,061 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-08-02T23:09:24,062 | ^~~~~~~ 2023-08-02T23:09:26,542 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/__subsample.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so 2023-08-02T23:09:26,649 building 'skbio.alignment._ssw_wrapper' extension 2023-08-02T23:09:26,650 creating build/temp.linux-armv7l-cpython-39/skbio/alignment 2023-08-02T23:09:26,651 creating build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib 2023-08-02T23:09:26,652 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-08-02T23:09:29,752 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-08-02T23:09:30,066 In file included from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2023-08-02T23:09:30,066 from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-08-02T23:09:30,067 from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-08-02T23:09:30,067 from skbio/alignment/_ssw_wrapper.c:777: 2023-08-02T23:09:30,067 /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-08-02T23:09:30,067 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-08-02T23:09:30,067 | ^~~~~~~ 2023-08-02T23:09:40,135 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so 2023-08-02T23:09:40,272 building 'skbio.diversity._phylogenetic' extension 2023-08-02T23:09:40,273 creating build/temp.linux-armv7l-cpython-39/skbio/diversity 2023-08-02T23:09:40,274 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o 2023-08-02T23:09:40,590 In file included from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2023-08-02T23:09:40,591 from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-08-02T23:09:40,591 from /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-08-02T23:09:40,591 from skbio/diversity/_phylogenetic.c:768: 2023-08-02T23:09:40,591 /tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-08-02T23:09:40,591 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-08-02T23:09:40,591 | ^~~~~~~ 2023-08-02T23:09:45,400 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so 2023-08-02T23:09:45,515 building 'skbio.stats.ordination._cutils' extension 2023-08-02T23:09:45,516 creating build/temp.linux-armv7l-cpython-39/skbio/stats/ordination 2023-08-02T23:09:45,517 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-08-02T23:10:03,340 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so 2023-08-02T23:10:03,501 building 'skbio.stats.distance._cutils' extension 2023-08-02T23:10:03,502 creating build/temp.linux-armv7l-cpython-39/skbio/stats/distance 2023-08-02T23:10:03,503 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-baxo3t3w/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/distance/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-08-02T23:10:23,538 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so 2023-08-02T23:10:23,727 installing to build/bdist.linux-armv7l/wheel 2023-08-02T23:10:23,727 running install 2023-08-02T23:10:23,752 running install_lib 2023-08-02T23:10:23,760 creating build/bdist.linux-armv7l 2023-08-02T23:10:23,761 creating build/bdist.linux-armv7l/wheel 2023-08-02T23:10:23,763 creating build/bdist.linux-armv7l/wheel/skbio 2023-08-02T23:10:23,764 copying build/lib.linux-armv7l-cpython-39/skbio/workflow.py -> build/bdist.linux-armv7l/wheel/skbio 2023-08-02T23:10:23,767 creating build/bdist.linux-armv7l/wheel/skbio/tree 2023-08-02T23:10:23,768 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-08-02T23:10:23,771 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-08-02T23:10:23,773 creating build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-08-02T23:10:23,774 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-08-02T23:10:23,777 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-08-02T23:10:23,780 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-08-02T23:10:23,783 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-08-02T23:10:23,785 copying build/lib.linux-armv7l-cpython-39/skbio/tree/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-08-02T23:10:23,787 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-08-02T23:10:23,791 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-08-02T23:10:23,794 creating build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,795 copying build/lib.linux-armv7l-cpython-39/skbio/util/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,797 creating build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-08-02T23:10:23,798 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-08-02T23:10:23,801 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-08-02T23:10:23,803 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-08-02T23:10:23,805 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-08-02T23:10:23,807 copying build/lib.linux-armv7l-cpython-39/skbio/util/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,810 copying build/lib.linux-armv7l-cpython-39/skbio/util/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,812 copying build/lib.linux-armv7l-cpython-39/skbio/util/_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,814 copying build/lib.linux-armv7l-cpython-39/skbio/util/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,816 copying build/lib.linux-armv7l-cpython-39/skbio/util/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-08-02T23:10:23,818 creating build/bdist.linux-armv7l/wheel/skbio/diversity 2023-08-02T23:10:23,820 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-08-02T23:10:23,822 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-08-02T23:10:23,825 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2023-08-02T23:10:23,826 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2023-08-02T23:10:23,829 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2023-08-02T23:10:23,831 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data 2023-08-02T23:10:23,832 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,833 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,835 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,837 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,839 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,841 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,843 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-08-02T23:10:23,845 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2023-08-02T23:10:23,847 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/test_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2023-08-02T23:10:23,849 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2023-08-02T23:10:23,852 creating build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-08-02T23:10:23,855 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-08-02T23:10:23,857 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-08-02T23:10:23,859 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-08-02T23:10:23,861 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-08-02T23:10:23,864 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-08-02T23:10:23,867 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,868 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,871 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,873 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,876 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,877 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,879 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,882 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data 2023-08-02T23:10:23,883 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:10:23,884 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:10:23,886 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:10:23,888 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:10:23,890 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-08-02T23:10:23,891 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,893 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_faith_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,895 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,897 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,899 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-08-02T23:10:23,901 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,903 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,905 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,908 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_faith_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-08-02T23:10:23,910 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-08-02T23:10:23,918 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-08-02T23:10:23,921 creating build/bdist.linux-armv7l/wheel/skbio/tests 2023-08-02T23:10:23,922 copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_workflow.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2023-08-02T23:10:23,925 copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2023-08-02T23:10:23,926 copying build/lib.linux-armv7l-cpython-39/skbio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2023-08-02T23:10:23,928 copying build/lib.linux-armv7l-cpython-39/skbio/__init__.py -> build/bdist.linux-armv7l/wheel/skbio 2023-08-02T23:10:23,931 creating build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:23,931 copying build/lib.linux-armv7l-cpython-39/skbio/io/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:23,933 copying build/lib.linux-armv7l-cpython-39/skbio/io/_fileobject.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:23,935 copying build/lib.linux-armv7l-cpython-39/skbio/io/_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:23,937 copying build/lib.linux-armv7l-cpython-39/skbio/io/util.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:23,940 creating build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-08-02T23:10:23,942 creating build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,943 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file_2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,945 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,946 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,948 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,949 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,951 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,953 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,954 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-08-02T23:10:23,956 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-08-02T23:10:23,959 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-08-02T23:10:23,960 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-08-02T23:10:23,962 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_registry.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-08-02T23:10:23,966 copying build/lib.linux-armv7l-cpython-39/skbio/io/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:23,968 creating build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:23,969 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:23,973 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:23,975 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_blast.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:23,977 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:23,979 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:23,982 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,983 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,985 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,987 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,989 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,992 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,994 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,996 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:23,998 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,001 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,003 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,005 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,007 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,010 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,012 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,015 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,023 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,023 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,025 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,027 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,029 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,030 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,032 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,034 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,036 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,037 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,039 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,040 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,042 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,043 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,045 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,047 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,048 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_del.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,050 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,052 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,053 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,055 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,057 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,059 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,060 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,062 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,064 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,066 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,068 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_two_chunks -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,070 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,071 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,073 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,075 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,077 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_simple -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,079 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,080 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,082 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,084 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,085 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,087 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,089 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,091 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,093 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,095 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_all_data_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,097 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,099 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,101 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,103 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,104 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,106 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,108 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,110 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,112 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,113 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,115 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,117 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_extensive_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,119 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,120 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,122 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,124 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example2_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,126 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,128 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_filter -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,130 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,131 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,133 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,135 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,137 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error11 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,139 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,140 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,142 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,144 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,145 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,147 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,149 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,151 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error21 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,152 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,154 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_footer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,156 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,158 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_constructed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,160 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,163 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,165 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_vtab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,168 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,170 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,173 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,175 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,176 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,178 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,180 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error23 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,182 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,183 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,185 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,187 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,189 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,190 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_tab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,192 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,194 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,196 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,197 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,199 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,201 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,202 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_reference_items -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,204 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,206 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,208 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_x -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,210 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,211 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,213 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,215 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,217 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,218 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_data_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,220 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,222 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,224 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_missing_locus_name -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,225 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,227 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,229 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,230 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,233 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,234 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,236 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,238 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,239 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_long_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,241 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,243 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,245 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,246 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,248 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,249 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,251 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,253 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,254 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_and_blast7_default -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,256 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,257 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,259 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,261 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,262 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,264 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,265 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,267 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,269 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error12 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,271 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,272 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_data_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,274 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,275 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_tabs.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,277 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,279 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,280 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,282 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,283 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,285 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gc -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,287 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,288 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,290 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,291 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_different_padding -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,293 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,294 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/empty -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,296 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,297 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,299 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,301 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,303 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,305 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,306 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,308 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,309 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error13 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,311 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,313 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,315 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error4 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,317 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,318 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,320 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,322 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error18 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,323 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_variable_length_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,325 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,326 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_reference -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,328 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,330 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,331 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,333 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,334 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,336 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,337 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,339 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_no_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,341 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,342 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,344 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,345 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_nonstring_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,347 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,348 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error15 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,350 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,351 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,353 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,354 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,356 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,358 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,360 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,361 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,363 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_spaces.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,364 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_missing_directive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,366 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,368 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,370 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error24 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,371 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,373 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,374 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,376 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,377 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,379 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_2_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,381 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,382 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,384 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/taxdump_nodes.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,385 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,387 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error10 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,389 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,390 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/tsv_10_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,392 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,393 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,395 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,397 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,399 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,401 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,402 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,404 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,405 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,407 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,408 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,410 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,411 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,413 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,414 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,416 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,417 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_double_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,419 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,421 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_column_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,422 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,425 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,426 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,428 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error6 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,430 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,431 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,433 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_extensive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,435 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,437 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,438 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,440 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,442 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,444 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,445 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_dna_3_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,447 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_null.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,448 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,450 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_msa -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,452 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,454 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_rna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,455 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error16 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,457 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,459 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,460 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,462 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,464 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,465 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error9 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,467 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,468 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,470 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/taxdump_names.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,471 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,473 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,474 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error19 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,476 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,477 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,479 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,481 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_diff_ids.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,483 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_dna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,485 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,487 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,489 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,491 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,493 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,495 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,497 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_multi_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,499 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,502 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error20 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,504 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,506 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,508 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,510 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,513 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_metadata_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,515 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_data_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,517 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,519 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,521 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_single_seq_sanger -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,523 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error14 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,525 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,527 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_double_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,530 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,532 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,534 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,536 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,538 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_escape.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,540 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_y -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,542 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,545 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,547 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,549 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_gibberish -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,551 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error7 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,553 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,555 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,557 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,559 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,562 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_lane -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,564 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_uniprot_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,566 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,569 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_tile -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,571 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,573 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/tsv_8_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,576 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,578 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_read -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,580 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/whitespace_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,582 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,584 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,585 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,587 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,589 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,591 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,592 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error17 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,595 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,596 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,598 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_space.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,600 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,602 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_no_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,604 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,606 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,607 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error22 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,610 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,611 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_short_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,613 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,615 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,617 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-08-02T23:10:24,619 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,621 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,623 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,625 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,628 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-08-02T23:10:24,631 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,633 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,635 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,637 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,640 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,642 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,644 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,647 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,649 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,652 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,655 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,657 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,660 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,662 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,665 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,667 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-08-02T23:10:24,669 copying build/lib.linux-armv7l-cpython-39/skbio/io/registry.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:24,672 copying build/lib.linux-armv7l-cpython-39/skbio/io/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-08-02T23:10:24,675 creating build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,675 copying build/lib.linux-armv7l-cpython-39/skbio/stats/composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,679 copying build/lib.linux-armv7l-cpython-39/skbio/stats/gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,682 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,683 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,686 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,717 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,718 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,721 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,724 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,725 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,727 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,729 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm4.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,731 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,732 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,734 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,736 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,738 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,740 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,742 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,747 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,749 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,751 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,752 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm3.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,754 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df_extra_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,756 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,758 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,759 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm_reordered.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,761 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,763 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,765 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,767 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,769 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,771 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-08-02T23:10:24,773 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,774 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,777 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,780 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,782 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-08-02T23:10:24,785 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,787 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,789 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,791 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,794 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,796 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,799 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-08-02T23:10:24,802 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2023-08-02T23:10:24,804 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2023-08-02T23:10:24,805 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/test_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2023-08-02T23:10:24,807 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2023-08-02T23:10:24,809 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2023-08-02T23:10:24,810 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2023-08-02T23:10:24,813 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,814 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,818 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,819 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,823 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_power.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,826 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,827 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,829 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,831 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,832 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,834 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,836 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,838 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,840 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,842 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,843 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,845 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,847 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-08-02T23:10:24,849 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,850 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-08-02T23:10:24,853 copying build/lib.linux-armv7l-cpython-39/skbio/stats/power.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,856 copying build/lib.linux-armv7l-cpython-39/skbio/stats/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,858 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,860 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,862 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,864 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,884 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,885 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,888 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,892 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,893 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,894 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/L&L_CA_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,896 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_skbio -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,898 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,900 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,902 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,903 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,906 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,908 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,910 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,912 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,913 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,915 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,917 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,919 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varespec.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,921 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,923 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,925 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,927 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,929 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,931 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,932 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,934 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,936 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,938 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varechem.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,940 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,942 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,944 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,946 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,948 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,950 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,951 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,953 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,955 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,957 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,958 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,961 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,962 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,964 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,966 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-08-02T23:10:24,968 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,970 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,972 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,974 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,976 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-08-02T23:10:24,978 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,981 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,983 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,985 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,987 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-08-02T23:10:24,990 copying build/lib.linux-armv7l-cpython-39/skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,996 copying build/lib.linux-armv7l-cpython-39/skbio/stats/_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:24,998 copying build/lib.linux-armv7l-cpython-39/skbio/stats/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-08-02T23:10:25,000 creating build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,001 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,003 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,006 creating build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,007 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_nucleotide_sequences.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,009 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,011 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,016 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,018 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,020 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,022 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,024 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,026 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-08-02T23:10:25,028 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,031 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,033 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,035 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,037 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,041 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,045 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,047 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_nucleotide_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-08-02T23:10:25,049 copying build/lib.linux-armv7l-cpython-39/skbio/test.py -> build/bdist.linux-armv7l/wheel/skbio 2023-08-02T23:10:25,051 creating build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,052 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,055 creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-08-02T23:10:25,056 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-08-02T23:10:25,058 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_intersection.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-08-02T23:10:25,060 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-08-02T23:10:25,063 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-08-02T23:10:25,065 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,068 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,070 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,072 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,089 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-08-02T23:10:25,091 copying build/lib.linux-armv7l-cpython-39/skbio/_base.py -> build/bdist.linux-armv7l/wheel/skbio 2023-08-02T23:10:25,094 creating build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,094 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,112 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_indexing.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,114 creating build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-08-02T23:10:25,115 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_ssw.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-08-02T23:10:25,118 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-08-02T23:10:25,123 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-08-02T23:10:25,125 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-08-02T23:10:25,128 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,131 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,133 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,135 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-08-02T23:10:25,139 creating build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2023-08-02T23:10:25,139 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2023-08-02T23:10:25,141 running install_egg_info 2023-08-02T23:10:25,168 running egg_info 2023-08-02T23:10:25,174 writing scikit_bio.egg-info/PKG-INFO 2023-08-02T23:10:25,176 writing dependency_links to scikit_bio.egg-info/dependency_links.txt 2023-08-02T23:10:25,178 writing requirements to scikit_bio.egg-info/requires.txt 2023-08-02T23:10:25,179 writing top-level names to scikit_bio.egg-info/top_level.txt 2023-08-02T23:10:25,357 reading manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:10:25,393 reading manifest template 'MANIFEST.in' 2023-08-02T23:10:25,435 no previously-included directories found matching 'doc/build' 2023-08-02T23:10:25,437 no previously-included directories found matching 'doc/source/generated' 2023-08-02T23:10:25,441 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-08-02T23:10:25,446 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-08-02T23:10:25,451 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-08-02T23:10:25,455 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-08-02T23:10:25,459 warning: no previously-included files matching '.coverage' found anywhere in distribution 2023-08-02T23:10:25,459 adding license file 'LICENSE.txt' 2023-08-02T23:10:25,506 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-08-02T23:10:25,509 Copying scikit_bio.egg-info to build/bdist.linux-armv7l/wheel/scikit_bio-0.5.9-py3.9.egg-info 2023-08-02T23:10:25,519 running install_scripts 2023-08-02T23:10:25,568 creating build/bdist.linux-armv7l/wheel/scikit_bio-0.5.9.dist-info/WHEEL 2023-08-02T23:10:25,571 creating '/tmp/pip-wheel-hptj0xuc/.tmp-0ntaf1_d/scikit_bio-0.5.9-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-02T23:10:25,574 adding 'skbio/__init__.py' 2023-08-02T23:10:25,576 adding 'skbio/_base.py' 2023-08-02T23:10:25,577 adding 'skbio/test.py' 2023-08-02T23:10:25,580 adding 'skbio/workflow.py' 2023-08-02T23:10:25,582 adding 'skbio/alignment/__init__.py' 2023-08-02T23:10:25,584 adding 'skbio/alignment/_indexing.py' 2023-08-02T23:10:25,589 adding 'skbio/alignment/_pairwise.py' 2023-08-02T23:10:25,590 adding 'skbio/alignment/_repr.py' 2023-08-02T23:10:25,740 adding 'skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so' 2023-08-02T23:10:25,754 adding 'skbio/alignment/_tabular_msa.py' 2023-08-02T23:10:25,756 adding 'skbio/alignment/_lib/__init__.py' 2023-08-02T23:10:25,757 adding 'skbio/alignment/tests/__init__.py' 2023-08-02T23:10:25,760 adding 'skbio/alignment/tests/test_pairwise.py' 2023-08-02T23:10:25,763 adding 'skbio/alignment/tests/test_ssw.py' 2023-08-02T23:10:25,774 adding 'skbio/alignment/tests/test_tabular_msa.py' 2023-08-02T23:10:25,778 adding 'skbio/diversity/__init__.py' 2023-08-02T23:10:25,781 adding 'skbio/diversity/_block.py' 2023-08-02T23:10:25,783 adding 'skbio/diversity/_driver.py' 2023-08-02T23:10:25,845 adding 'skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so' 2023-08-02T23:10:25,849 adding 'skbio/diversity/_util.py' 2023-08-02T23:10:25,851 adding 'skbio/diversity/alpha/__init__.py' 2023-08-02T23:10:25,852 adding 'skbio/diversity/alpha/_ace.py' 2023-08-02T23:10:25,855 adding 'skbio/diversity/alpha/_base.py' 2023-08-02T23:10:25,857 adding 'skbio/diversity/alpha/_chao1.py' 2023-08-02T23:10:25,858 adding 'skbio/diversity/alpha/_faith_pd.py' 2023-08-02T23:10:25,860 adding 'skbio/diversity/alpha/_gini.py' 2023-08-02T23:10:25,862 adding 'skbio/diversity/alpha/_lladser.py' 2023-08-02T23:10:25,864 adding 'skbio/diversity/alpha/tests/__init__.py' 2023-08-02T23:10:25,866 adding 'skbio/diversity/alpha/tests/test_ace.py' 2023-08-02T23:10:25,867 adding 'skbio/diversity/alpha/tests/test_base.py' 2023-08-02T23:10:25,869 adding 'skbio/diversity/alpha/tests/test_chao1.py' 2023-08-02T23:10:25,870 adding 'skbio/diversity/alpha/tests/test_faith_pd.py' 2023-08-02T23:10:25,872 adding 'skbio/diversity/alpha/tests/test_gini.py' 2023-08-02T23:10:25,873 adding 'skbio/diversity/alpha/tests/test_lladser.py' 2023-08-02T23:10:25,875 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/README.md' 2023-08-02T23:10:25,877 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt' 2023-08-02T23:10:25,878 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv' 2023-08-02T23:10:25,879 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk' 2023-08-02T23:10:25,881 adding 'skbio/diversity/beta/__init__.py' 2023-08-02T23:10:25,883 adding 'skbio/diversity/beta/_unifrac.py' 2023-08-02T23:10:25,885 adding 'skbio/diversity/beta/tests/__init__.py' 2023-08-02T23:10:25,888 adding 'skbio/diversity/beta/tests/test_unifrac.py' 2023-08-02T23:10:25,890 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/README.md' 2023-08-02T23:10:25,891 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv' 2023-08-02T23:10:25,893 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk' 2023-08-02T23:10:25,894 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt' 2023-08-02T23:10:25,895 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt' 2023-08-02T23:10:25,896 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt' 2023-08-02T23:10:25,898 adding 'skbio/diversity/tests/__init__.py' 2023-08-02T23:10:25,900 adding 'skbio/diversity/tests/test_block.py' 2023-08-02T23:10:25,903 adding 'skbio/diversity/tests/test_driver.py' 2023-08-02T23:10:25,904 adding 'skbio/diversity/tests/test_util.py' 2023-08-02T23:10:25,907 adding 'skbio/io/__init__.py' 2023-08-02T23:10:25,908 adding 'skbio/io/_exception.py' 2023-08-02T23:10:25,910 adding 'skbio/io/_fileobject.py' 2023-08-02T23:10:25,911 adding 'skbio/io/_iosources.py' 2023-08-02T23:10:25,912 adding 'skbio/io/_warning.py' 2023-08-02T23:10:25,917 adding 'skbio/io/registry.py' 2023-08-02T23:10:25,920 adding 'skbio/io/util.py' 2023-08-02T23:10:25,922 adding 'skbio/io/format/__init__.py' 2023-08-02T23:10:25,924 adding 'skbio/io/format/_base.py' 2023-08-02T23:10:25,926 adding 'skbio/io/format/_blast.py' 2023-08-02T23:10:25,928 adding 'skbio/io/format/_sequence_feature_vocabulary.py' 2023-08-02T23:10:25,930 adding 'skbio/io/format/binary_dm.py' 2023-08-02T23:10:25,932 adding 'skbio/io/format/blast6.py' 2023-08-02T23:10:25,934 adding 'skbio/io/format/blast7.py' 2023-08-02T23:10:25,937 adding 'skbio/io/format/clustal.py' 2023-08-02T23:10:25,943 adding 'skbio/io/format/embl.py' 2023-08-02T23:10:25,945 adding 'skbio/io/format/emptyfile.py' 2023-08-02T23:10:25,949 adding 'skbio/io/format/fasta.py' 2023-08-02T23:10:25,952 adding 'skbio/io/format/fastq.py' 2023-08-02T23:10:25,955 adding 'skbio/io/format/genbank.py' 2023-08-02T23:10:25,958 adding 'skbio/io/format/gff3.py' 2023-08-02T23:10:25,960 adding 'skbio/io/format/lsmat.py' 2023-08-02T23:10:25,964 adding 'skbio/io/format/newick.py' 2023-08-02T23:10:25,967 adding 'skbio/io/format/ordination.py' 2023-08-02T23:10:25,970 adding 'skbio/io/format/phylip.py' 2023-08-02T23:10:25,972 adding 'skbio/io/format/qseq.py' 2023-08-02T23:10:25,976 adding 'skbio/io/format/stockholm.py' 2023-08-02T23:10:25,978 adding 'skbio/io/format/taxdump.py' 2023-08-02T23:10:25,980 adding 'skbio/io/format/tests/__init__.py' 2023-08-02T23:10:25,982 adding 'skbio/io/format/tests/test_base.py' 2023-08-02T23:10:25,984 adding 'skbio/io/format/tests/test_binary_dm.py' 2023-08-02T23:10:25,985 adding 'skbio/io/format/tests/test_blast6.py' 2023-08-02T23:10:25,987 adding 'skbio/io/format/tests/test_blast7.py' 2023-08-02T23:10:25,989 adding 'skbio/io/format/tests/test_clustal.py' 2023-08-02T23:10:25,992 adding 'skbio/io/format/tests/test_embl.py' 2023-08-02T23:10:25,994 adding 'skbio/io/format/tests/test_emptyfile.py' 2023-08-02T23:10:25,998 adding 'skbio/io/format/tests/test_fasta.py' 2023-08-02T23:10:26,001 adding 'skbio/io/format/tests/test_fastq.py' 2023-08-02T23:10:26,003 adding 'skbio/io/format/tests/test_genbank.py' 2023-08-02T23:10:26,006 adding 'skbio/io/format/tests/test_gff3.py' 2023-08-02T23:10:26,008 adding 'skbio/io/format/tests/test_lsmat.py' 2023-08-02T23:10:26,010 adding 'skbio/io/format/tests/test_newick.py' 2023-08-02T23:10:26,013 adding 'skbio/io/format/tests/test_ordination.py' 2023-08-02T23:10:26,015 adding 'skbio/io/format/tests/test_phylip.py' 2023-08-02T23:10:26,017 adding 'skbio/io/format/tests/test_qseq.py' 2023-08-02T23:10:26,019 adding 'skbio/io/format/tests/test_sequence_feature_vocabulary.py' 2023-08-02T23:10:26,021 adding 'skbio/io/format/tests/test_stockholm.py' 2023-08-02T23:10:26,023 adding 'skbio/io/format/tests/test_taxdump.py' 2023-08-02T23:10:26,031 adding 'skbio/io/format/tests/data/blast6_custom_minimal' 2023-08-02T23:10:26,032 adding 'skbio/io/format/tests/data/blast6_custom_mixed_nans' 2023-08-02T23:10:26,033 adding 'skbio/io/format/tests/data/blast6_custom_multi_line' 2023-08-02T23:10:26,034 adding 'skbio/io/format/tests/data/blast6_custom_single_line' 2023-08-02T23:10:26,036 adding 'skbio/io/format/tests/data/blast6_default_multi_line' 2023-08-02T23:10:26,037 adding 'skbio/io/format/tests/data/blast6_default_single_line' 2023-08-02T23:10:26,038 adding 'skbio/io/format/tests/data/blast6_invalid_column_types' 2023-08-02T23:10:26,039 adding 'skbio/io/format/tests/data/blast6_invalid_number_of_columns' 2023-08-02T23:10:26,040 adding 'skbio/io/format/tests/data/blast6_invalid_type_in_column' 2023-08-02T23:10:26,041 adding 'skbio/io/format/tests/data/blast7_custom_minimal' 2023-08-02T23:10:26,042 adding 'skbio/io/format/tests/data/blast7_custom_mixed_nans' 2023-08-02T23:10:26,043 adding 'skbio/io/format/tests/data/blast7_custom_multi_line' 2023-08-02T23:10:26,045 adding 'skbio/io/format/tests/data/blast7_custom_single_line' 2023-08-02T23:10:26,046 adding 'skbio/io/format/tests/data/blast7_default_multi_line' 2023-08-02T23:10:26,047 adding 'skbio/io/format/tests/data/blast7_default_single_line' 2023-08-02T23:10:26,048 adding 'skbio/io/format/tests/data/blast7_invalid_differing_fields' 2023-08-02T23:10:26,049 adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer' 2023-08-02T23:10:26,050 adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer_2' 2023-08-02T23:10:26,052 adding 'skbio/io/format/tests/data/blast7_invalid_gibberish' 2023-08-02T23:10:26,053 adding 'skbio/io/format/tests/data/blast7_invalid_no_data' 2023-08-02T23:10:26,054 adding 'skbio/io/format/tests/data/blast7_invalid_too_many_columns' 2023-08-02T23:10:26,055 adding 'skbio/io/format/tests/data/blast7_invalid_unrecognized_field' 2023-08-02T23:10:26,056 adding 'skbio/io/format/tests/data/embl_constructed' 2023-08-02T23:10:26,058 adding 'skbio/io/format/tests/data/embl_feature_level_record' 2023-08-02T23:10:26,059 adding 'skbio/io/format/tests/data/embl_feature_level_record_no_FT' 2023-08-02T23:10:26,061 adding 'skbio/io/format/tests/data/embl_multi_records' 2023-08-02T23:10:26,062 adding 'skbio/io/format/tests/data/embl_single_record' 2023-08-02T23:10:26,064 adding 'skbio/io/format/tests/data/embl_single_record_lower' 2023-08-02T23:10:26,065 adding 'skbio/io/format/tests/data/embl_single_record_simple' 2023-08-02T23:10:26,066 adding 'skbio/io/format/tests/data/embl_single_record_upper' 2023-08-02T23:10:26,068 adding 'skbio/io/format/tests/data/embl_uniprot_record' 2023-08-02T23:10:26,069 adding 'skbio/io/format/tests/data/embl_w_beginning_whitespace' 2023-08-02T23:10:26,070 adding 'skbio/io/format/tests/data/empty' 2023-08-02T23:10:26,071 adding 'skbio/io/format/tests/data/error_diff_ids.fastq' 2023-08-02T23:10:26,072 adding 'skbio/io/format/tests/data/error_double_qual.fastq' 2023-08-02T23:10:26,073 adding 'skbio/io/format/tests/data/error_double_seq.fastq' 2023-08-02T23:10:26,075 adding 'skbio/io/format/tests/data/error_long_qual.fastq' 2023-08-02T23:10:26,076 adding 'skbio/io/format/tests/data/error_no_qual.fastq' 2023-08-02T23:10:26,077 adding 'skbio/io/format/tests/data/error_qual_del.fastq' 2023-08-02T23:10:26,078 adding 'skbio/io/format/tests/data/error_qual_escape.fastq' 2023-08-02T23:10:26,079 adding 'skbio/io/format/tests/data/error_qual_null.fastq' 2023-08-02T23:10:26,081 adding 'skbio/io/format/tests/data/error_qual_space.fastq' 2023-08-02T23:10:26,082 adding 'skbio/io/format/tests/data/error_qual_tab.fastq' 2023-08-02T23:10:26,083 adding 'skbio/io/format/tests/data/error_qual_unit_sep.fastq' 2023-08-02T23:10:26,084 adding 'skbio/io/format/tests/data/error_qual_vtab.fastq' 2023-08-02T23:10:26,085 adding 'skbio/io/format/tests/data/error_short_qual.fastq' 2023-08-02T23:10:26,086 adding 'skbio/io/format/tests/data/error_spaces.fastq' 2023-08-02T23:10:26,088 adding 'skbio/io/format/tests/data/error_tabs.fastq' 2023-08-02T23:10:26,089 adding 'skbio/io/format/tests/data/error_trunc_at_plus.fastq' 2023-08-02T23:10:26,090 adding 'skbio/io/format/tests/data/error_trunc_at_qual.fastq' 2023-08-02T23:10:26,091 adding 'skbio/io/format/tests/data/error_trunc_at_seq.fastq' 2023-08-02T23:10:26,092 adding 'skbio/io/format/tests/data/error_trunc_in_plus.fastq' 2023-08-02T23:10:26,093 adding 'skbio/io/format/tests/data/error_trunc_in_qual.fastq' 2023-08-02T23:10:26,095 adding 'skbio/io/format/tests/data/error_trunc_in_seq.fastq' 2023-08-02T23:10:26,096 adding 'skbio/io/format/tests/data/error_trunc_in_title.fastq' 2023-08-02T23:10:26,097 adding 'skbio/io/format/tests/data/fasta_10_seqs' 2023-08-02T23:10:26,098 adding 'skbio/io/format/tests/data/fasta_3_seqs_defaults' 2023-08-02T23:10:26,099 adding 'skbio/io/format/tests/data/fasta_3_seqs_non_defaults' 2023-08-02T23:10:26,100 adding 'skbio/io/format/tests/data/fasta_5_blanks_start_of_file' 2023-08-02T23:10:26,101 adding 'skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file' 2023-08-02T23:10:26,102 adding 'skbio/io/format/tests/data/fasta_6_blanks_start_of_file' 2023-08-02T23:10:26,104 adding 'skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file' 2023-08-02T23:10:26,105 adding 'skbio/io/format/tests/data/fasta_blank_lines_between_records' 2023-08-02T23:10:26,106 adding 'skbio/io/format/tests/data/fasta_blanks_end_of_file' 2023-08-02T23:10:26,107 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str' 2023-08-02T23:10:26,108 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char' 2023-08-02T23:10:26,109 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_none' 2023-08-02T23:10:26,110 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str' 2023-08-02T23:10:26,111 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char' 2023-08-02T23:10:26,113 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_none' 2023-08-02T23:10:26,114 adding 'skbio/io/format/tests/data/fasta_invalid_after_10_seqs' 2023-08-02T23:10:26,115 adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_after_header' 2023-08-02T23:10:26,116 adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence' 2023-08-02T23:10:26,117 adding 'skbio/io/format/tests/data/fasta_invalid_blank_sequence' 2023-08-02T23:10:26,118 adding 'skbio/io/format/tests/data/fasta_invalid_legacy_format' 2023-08-02T23:10:26,119 adding 'skbio/io/format/tests/data/fasta_invalid_missing_header' 2023-08-02T23:10:26,120 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first' 2023-08-02T23:10:26,121 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last' 2023-08-02T23:10:26,123 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle' 2023-08-02T23:10:26,124 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header' 2023-08-02T23:10:26,125 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence' 2023-08-02T23:10:26,126 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence' 2023-08-02T23:10:26,127 adding 'skbio/io/format/tests/data/fasta_max_width_1' 2023-08-02T23:10:26,128 adding 'skbio/io/format/tests/data/fasta_max_width_5' 2023-08-02T23:10:26,129 adding 'skbio/io/format/tests/data/fasta_mixed_qual_scores' 2023-08-02T23:10:26,130 adding 'skbio/io/format/tests/data/fasta_multi_seq' 2023-08-02T23:10:26,132 adding 'skbio/io/format/tests/data/fasta_multi_seq_roundtrip' 2023-08-02T23:10:26,133 adding 'skbio/io/format/tests/data/fasta_prot_seqs_odd_labels' 2023-08-02T23:10:26,134 adding 'skbio/io/format/tests/data/fasta_single_bio_seq_defaults' 2023-08-02T23:10:26,135 adding 'skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults' 2023-08-02T23:10:26,136 adding 'skbio/io/format/tests/data/fasta_single_dna_seq_defaults' 2023-08-02T23:10:26,137 adding 'skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults' 2023-08-02T23:10:26,138 adding 'skbio/io/format/tests/data/fasta_single_prot_seq_defaults' 2023-08-02T23:10:26,139 adding 'skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults' 2023-08-02T23:10:26,140 adding 'skbio/io/format/tests/data/fasta_single_rna_seq_defaults' 2023-08-02T23:10:26,141 adding 'skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults' 2023-08-02T23:10:26,142 adding 'skbio/io/format/tests/data/fasta_single_seq' 2023-08-02T23:10:26,143 adding 'skbio/io/format/tests/data/fasta_tabular_msa_different_type' 2023-08-02T23:10:26,145 adding 'skbio/io/format/tests/data/fasta_ws_lines_between_records' 2023-08-02T23:10:26,146 adding 'skbio/io/format/tests/data/fasta_ws_lines_end_of_file' 2023-08-02T23:10:26,147 adding 'skbio/io/format/tests/data/fastq_5_blanks_start_of_file' 2023-08-02T23:10:26,148 adding 'skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file' 2023-08-02T23:10:26,149 adding 'skbio/io/format/tests/data/fastq_blank_lines' 2023-08-02T23:10:26,150 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_header' 2023-08-02T23:10:26,151 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_plus' 2023-08-02T23:10:26,152 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_seq' 2023-08-02T23:10:26,153 adding 'skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol' 2023-08-02T23:10:26,155 adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_qual' 2023-08-02T23:10:26,156 adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_seq' 2023-08-02T23:10:26,157 adding 'skbio/io/format/tests/data/fastq_invalid_missing_header' 2023-08-02T23:10:26,158 adding 'skbio/io/format/tests/data/fastq_invalid_missing_seq_data' 2023-08-02T23:10:26,159 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_header' 2023-08-02T23:10:26,160 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus' 2023-08-02T23:10:26,161 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq' 2023-08-02T23:10:26,163 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual' 2023-08-02T23:10:26,164 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq' 2023-08-02T23:10:26,165 adding 'skbio/io/format/tests/data/fastq_multi_blank_between_records' 2023-08-02T23:10:26,166 adding 'skbio/io/format/tests/data/fastq_multi_blank_end_of_file' 2023-08-02T23:10:26,167 adding 'skbio/io/format/tests/data/fastq_multi_blank_start_of_file' 2023-08-02T23:10:26,168 adding 'skbio/io/format/tests/data/fastq_multi_seq_sanger' 2023-08-02T23:10:26,170 adding 'skbio/io/format/tests/data/fastq_multi_whitespace_stripping' 2023-08-02T23:10:26,171 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_between_records' 2023-08-02T23:10:26,172 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file' 2023-08-02T23:10:26,173 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file' 2023-08-02T23:10:26,174 adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.3' 2023-08-02T23:10:26,175 adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.8' 2023-08-02T23:10:26,176 adding 'skbio/io/format/tests/data/fastq_whitespace_only_lines' 2023-08-02T23:10:26,178 adding 'skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description' 2023-08-02T23:10:26,179 adding 'skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description' 2023-08-02T23:10:26,180 adding 'skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description' 2023-08-02T23:10:26,181 adding 'skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults' 2023-08-02T23:10:26,182 adding 'skbio/io/format/tests/data/fastq_writer_sanger_defaults' 2023-08-02T23:10:26,184 adding 'skbio/io/format/tests/data/fastq_writer_sanger_non_defaults' 2023-08-02T23:10:26,185 adding 'skbio/io/format/tests/data/genbank_5_blanks_start_of_file' 2023-08-02T23:10:26,186 adding 'skbio/io/format/tests/data/genbank_6_blanks_start_of_file' 2023-08-02T23:10:26,187 adding 'skbio/io/format/tests/data/genbank_missing_locus_name' 2023-08-02T23:10:26,188 adding 'skbio/io/format/tests/data/genbank_multi_records' 2023-08-02T23:10:26,190 adding 'skbio/io/format/tests/data/genbank_single_record' 2023-08-02T23:10:26,191 adding 'skbio/io/format/tests/data/genbank_single_record_lower' 2023-08-02T23:10:26,192 adding 'skbio/io/format/tests/data/genbank_single_record_upper' 2023-08-02T23:10:26,193 adding 'skbio/io/format/tests/data/genbank_w_beginning_whitespace' 2023-08-02T23:10:26,194 adding 'skbio/io/format/tests/data/gff3_bad_missing_directive' 2023-08-02T23:10:26,195 adding 'skbio/io/format/tests/data/gff3_bad_wrong_columns' 2023-08-02T23:10:26,197 adding 'skbio/io/format/tests/data/gff3_dna' 2023-08-02T23:10:26,198 adding 'skbio/io/format/tests/data/gff3_multi_record' 2023-08-02T23:10:26,199 adding 'skbio/io/format/tests/data/gff3_single_record' 2023-08-02T23:10:26,200 adding 'skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq' 2023-08-02T23:10:26,202 adding 'skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq' 2023-08-02T23:10:26,203 adding 'skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq' 2023-08-02T23:10:26,204 adding 'skbio/io/format/tests/data/legacy9_and_blast7_default' 2023-08-02T23:10:26,205 adding 'skbio/io/format/tests/data/legacy9_invalid_differing_fields' 2023-08-02T23:10:26,206 adding 'skbio/io/format/tests/data/legacy9_invalid_too_many_columns' 2023-08-02T23:10:26,207 adding 'skbio/io/format/tests/data/legacy9_mixed_nans' 2023-08-02T23:10:26,209 adding 'skbio/io/format/tests/data/legacy9_multi_line' 2023-08-02T23:10:26,210 adding 'skbio/io/format/tests/data/legacy9_single_line' 2023-08-02T23:10:26,212 adding 'skbio/io/format/tests/data/longreads_as_illumina.fastq' 2023-08-02T23:10:26,214 adding 'skbio/io/format/tests/data/longreads_as_sanger.fastq' 2023-08-02T23:10:26,216 adding 'skbio/io/format/tests/data/longreads_original_sanger.fastq' 2023-08-02T23:10:26,218 adding 'skbio/io/format/tests/data/misc_dna_as_illumina.fastq' 2023-08-02T23:10:26,219 adding 'skbio/io/format/tests/data/misc_dna_as_sanger.fastq' 2023-08-02T23:10:26,220 adding 'skbio/io/format/tests/data/misc_dna_original_sanger.fastq' 2023-08-02T23:10:26,221 adding 'skbio/io/format/tests/data/misc_rna_as_illumina.fastq' 2023-08-02T23:10:26,223 adding 'skbio/io/format/tests/data/misc_rna_as_sanger.fastq' 2023-08-02T23:10:26,224 adding 'skbio/io/format/tests/data/misc_rna_original_sanger.fastq' 2023-08-02T23:10:26,225 adding 'skbio/io/format/tests/data/ordination_L&L_CA_data_scores' 2023-08-02T23:10:26,226 adding 'skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores' 2023-08-02T23:10:26,228 adding 'skbio/io/format/tests/data/ordination_error1' 2023-08-02T23:10:26,229 adding 'skbio/io/format/tests/data/ordination_error10' 2023-08-02T23:10:26,231 adding 'skbio/io/format/tests/data/ordination_error11' 2023-08-02T23:10:26,232 adding 'skbio/io/format/tests/data/ordination_error12' 2023-08-02T23:10:26,233 adding 'skbio/io/format/tests/data/ordination_error13' 2023-08-02T23:10:26,234 adding 'skbio/io/format/tests/data/ordination_error14' 2023-08-02T23:10:26,236 adding 'skbio/io/format/tests/data/ordination_error15' 2023-08-02T23:10:26,237 adding 'skbio/io/format/tests/data/ordination_error16' 2023-08-02T23:10:26,239 adding 'skbio/io/format/tests/data/ordination_error17' 2023-08-02T23:10:26,240 adding 'skbio/io/format/tests/data/ordination_error18' 2023-08-02T23:10:26,241 adding 'skbio/io/format/tests/data/ordination_error19' 2023-08-02T23:10:26,243 adding 'skbio/io/format/tests/data/ordination_error2' 2023-08-02T23:10:26,244 adding 'skbio/io/format/tests/data/ordination_error20' 2023-08-02T23:10:26,245 adding 'skbio/io/format/tests/data/ordination_error21' 2023-08-02T23:10:26,246 adding 'skbio/io/format/tests/data/ordination_error22' 2023-08-02T23:10:26,247 adding 'skbio/io/format/tests/data/ordination_error23' 2023-08-02T23:10:26,248 adding 'skbio/io/format/tests/data/ordination_error24' 2023-08-02T23:10:26,250 adding 'skbio/io/format/tests/data/ordination_error3' 2023-08-02T23:10:26,251 adding 'skbio/io/format/tests/data/ordination_error4' 2023-08-02T23:10:26,253 adding 'skbio/io/format/tests/data/ordination_error5' 2023-08-02T23:10:26,254 adding 'skbio/io/format/tests/data/ordination_error6' 2023-08-02T23:10:26,256 adding 'skbio/io/format/tests/data/ordination_error7' 2023-08-02T23:10:26,257 adding 'skbio/io/format/tests/data/ordination_error8' 2023-08-02T23:10:26,258 adding 'skbio/io/format/tests/data/ordination_error9' 2023-08-02T23:10:26,259 adding 'skbio/io/format/tests/data/ordination_example2_scores' 2023-08-02T23:10:26,261 adding 'skbio/io/format/tests/data/ordination_example3_scores' 2023-08-02T23:10:26,262 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site' 2023-08-02T23:10:26,264 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints' 2023-08-02T23:10:26,265 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species' 2023-08-02T23:10:26,266 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site' 2023-08-02T23:10:26,268 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site' 2023-08-02T23:10:26,269 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints' 2023-08-02T23:10:26,270 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species' 2023-08-02T23:10:26,271 adding 'skbio/io/format/tests/data/phylip_dna_3_seqs' 2023-08-02T23:10:26,273 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_after_header' 2023-08-02T23:10:26,274 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_before_header' 2023-08-02T23:10:26,275 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs' 2023-08-02T23:10:26,276 adding 'skbio/io/format/tests/data/phylip_invalid_header_too_long' 2023-08-02T23:10:26,277 adding 'skbio/io/format/tests/data/phylip_invalid_header_too_short' 2023-08-02T23:10:26,278 adding 'skbio/io/format/tests/data/phylip_invalid_no_header' 2023-08-02T23:10:26,279 adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_long' 2023-08-02T23:10:26,281 adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_short' 2023-08-02T23:10:26,282 adding 'skbio/io/format/tests/data/phylip_invalid_too_few_seqs' 2023-08-02T23:10:26,283 adding 'skbio/io/format/tests/data/phylip_invalid_too_many_seqs' 2023-08-02T23:10:26,284 adding 'skbio/io/format/tests/data/phylip_invalid_zero_seq_len' 2023-08-02T23:10:26,285 adding 'skbio/io/format/tests/data/phylip_invalid_zero_seqs' 2023-08-02T23:10:26,286 adding 'skbio/io/format/tests/data/phylip_single_seq_long' 2023-08-02T23:10:26,287 adding 'skbio/io/format/tests/data/phylip_single_seq_short' 2023-08-02T23:10:26,288 adding 'skbio/io/format/tests/data/phylip_two_chunks' 2023-08-02T23:10:26,290 adding 'skbio/io/format/tests/data/phylip_variable_length_ids' 2023-08-02T23:10:26,291 adding 'skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs' 2023-08-02T23:10:26,292 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_1' 2023-08-02T23:10:26,293 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_2' 2023-08-02T23:10:26,294 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_3' 2023-08-02T23:10:26,295 adding 'skbio/io/format/tests/data/qseq_invalid_filter' 2023-08-02T23:10:26,296 adding 'skbio/io/format/tests/data/qseq_invalid_lane' 2023-08-02T23:10:26,297 adding 'skbio/io/format/tests/data/qseq_invalid_read' 2023-08-02T23:10:26,299 adding 'skbio/io/format/tests/data/qseq_invalid_tile' 2023-08-02T23:10:26,300 adding 'skbio/io/format/tests/data/qseq_invalid_x' 2023-08-02T23:10:26,301 adding 'skbio/io/format/tests/data/qseq_invalid_y' 2023-08-02T23:10:26,302 adding 'skbio/io/format/tests/data/qseq_multi_seq_illumina1.3' 2023-08-02T23:10:26,303 adding 'skbio/io/format/tests/data/qseq_single_seq_sanger' 2023-08-02T23:10:26,304 adding 'skbio/io/format/tests/data/qual_2_seqs_defaults' 2023-08-02T23:10:26,305 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults' 2023-08-02T23:10:26,306 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch' 2023-08-02T23:10:26,308 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_extra' 2023-08-02T23:10:26,309 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch' 2023-08-02T23:10:26,310 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch' 2023-08-02T23:10:26,311 adding 'skbio/io/format/tests/data/qual_3_seqs_non_defaults' 2023-08-02T23:10:26,312 adding 'skbio/io/format/tests/data/qual_5_blanks_start_of_file' 2023-08-02T23:10:26,313 adding 'skbio/io/format/tests/data/qual_5_ws_lines_start_of_file' 2023-08-02T23:10:26,314 adding 'skbio/io/format/tests/data/qual_6_blanks_start_of_file' 2023-08-02T23:10:26,316 adding 'skbio/io/format/tests/data/qual_6_ws_lines_start_of_file' 2023-08-02T23:10:26,317 adding 'skbio/io/format/tests/data/qual_blank_lines_between_records' 2023-08-02T23:10:26,318 adding 'skbio/io/format/tests/data/qual_blanks_end_of_file' 2023-08-02T23:10:26,319 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_empty_str' 2023-08-02T23:10:26,320 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_multi_char' 2023-08-02T23:10:26,321 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_none' 2023-08-02T23:10:26,323 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str' 2023-08-02T23:10:26,324 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char' 2023-08-02T23:10:26,325 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_none' 2023-08-02T23:10:26,326 adding 'skbio/io/format/tests/data/qual_invalid_blank_line_after_header' 2023-08-02T23:10:26,327 adding 'skbio/io/format/tests/data/qual_invalid_blank_line_within_seq' 2023-08-02T23:10:26,328 adding 'skbio/io/format/tests/data/qual_invalid_blank_sequence' 2023-08-02T23:10:26,329 adding 'skbio/io/format/tests/data/qual_invalid_legacy_format' 2023-08-02T23:10:26,330 adding 'skbio/io/format/tests/data/qual_invalid_missing_header' 2023-08-02T23:10:26,332 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first' 2023-08-02T23:10:26,333 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last' 2023-08-02T23:10:26,334 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle' 2023-08-02T23:10:26,335 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_float' 2023-08-02T23:10:26,336 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_negative' 2023-08-02T23:10:26,337 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_over_255' 2023-08-02T23:10:26,338 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_string' 2023-08-02T23:10:26,340 adding 'skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq' 2023-08-02T23:10:26,341 adding 'skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence' 2023-08-02T23:10:26,342 adding 'skbio/io/format/tests/data/qual_invalid_ws_line_after_header' 2023-08-02T23:10:26,343 adding 'skbio/io/format/tests/data/qual_max_width_1' 2023-08-02T23:10:26,344 adding 'skbio/io/format/tests/data/qual_max_width_5' 2023-08-02T23:10:26,345 adding 'skbio/io/format/tests/data/qual_multi_seq' 2023-08-02T23:10:26,346 adding 'skbio/io/format/tests/data/qual_multi_seq_roundtrip' 2023-08-02T23:10:26,347 adding 'skbio/io/format/tests/data/qual_prot_seqs_odd_labels' 2023-08-02T23:10:26,348 adding 'skbio/io/format/tests/data/qual_single_bio_seq_non_defaults' 2023-08-02T23:10:26,350 adding 'skbio/io/format/tests/data/qual_single_dna_seq_non_defaults' 2023-08-02T23:10:26,351 adding 'skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults' 2023-08-02T23:10:26,352 adding 'skbio/io/format/tests/data/qual_single_prot_seq_non_defaults' 2023-08-02T23:10:26,353 adding 'skbio/io/format/tests/data/qual_single_rna_seq_non_defaults' 2023-08-02T23:10:26,354 adding 'skbio/io/format/tests/data/qual_single_seq' 2023-08-02T23:10:26,355 adding 'skbio/io/format/tests/data/qual_tabular_msa_different_type' 2023-08-02T23:10:26,356 adding 'skbio/io/format/tests/data/qual_ws_lines_between_records' 2023-08-02T23:10:26,357 adding 'skbio/io/format/tests/data/qual_ws_lines_end_of_file' 2023-08-02T23:10:26,358 adding 'skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq' 2023-08-02T23:10:26,360 adding 'skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq' 2023-08-02T23:10:26,361 adding 'skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq' 2023-08-02T23:10:26,362 adding 'skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq' 2023-08-02T23:10:26,363 adding 'skbio/io/format/tests/data/stockholm_all_data_types' 2023-08-02T23:10:26,364 adding 'skbio/io/format/tests/data/stockholm_blank_lines' 2023-08-02T23:10:26,365 adding 'skbio/io/format/tests/data/stockholm_data_only' 2023-08-02T23:10:26,366 adding 'skbio/io/format/tests/data/stockholm_different_padding' 2023-08-02T23:10:26,368 adding 'skbio/io/format/tests/data/stockholm_differing_gc_data_length' 2023-08-02T23:10:26,369 adding 'skbio/io/format/tests/data/stockholm_differing_gr_data_length' 2023-08-02T23:10:26,370 adding 'skbio/io/format/tests/data/stockholm_differing_seq_lengths' 2023-08-02T23:10:26,371 adding 'skbio/io/format/tests/data/stockholm_duplicate_gc' 2023-08-02T23:10:26,372 adding 'skbio/io/format/tests/data/stockholm_duplicate_gr' 2023-08-02T23:10:26,373 adding 'skbio/io/format/tests/data/stockholm_duplicate_sequence_names' 2023-08-02T23:10:26,374 adding 'skbio/io/format/tests/data/stockholm_duplicate_tree_ids' 2023-08-02T23:10:26,376 adding 'skbio/io/format/tests/data/stockholm_extensive' 2023-08-02T23:10:26,377 adding 'skbio/io/format/tests/data/stockholm_extensive_mixed' 2023-08-02T23:10:26,378 adding 'skbio/io/format/tests/data/stockholm_invalid_data_type' 2023-08-02T23:10:26,379 adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr' 2023-08-02T23:10:26,380 adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs' 2023-08-02T23:10:26,381 adding 'skbio/io/format/tests/data/stockholm_malformed_data_line' 2023-08-02T23:10:26,382 adding 'skbio/io/format/tests/data/stockholm_malformed_gc_line' 2023-08-02T23:10:26,384 adding 'skbio/io/format/tests/data/stockholm_malformed_gf_line' 2023-08-02T23:10:26,385 adding 'skbio/io/format/tests/data/stockholm_malformed_gr_line' 2023-08-02T23:10:26,386 adding 'skbio/io/format/tests/data/stockholm_malformed_gs_line' 2023-08-02T23:10:26,387 adding 'skbio/io/format/tests/data/stockholm_metadata_only' 2023-08-02T23:10:26,388 adding 'skbio/io/format/tests/data/stockholm_minimal' 2023-08-02T23:10:26,389 adding 'skbio/io/format/tests/data/stockholm_missing_footer' 2023-08-02T23:10:26,390 adding 'skbio/io/format/tests/data/stockholm_missing_header' 2023-08-02T23:10:26,391 adding 'skbio/io/format/tests/data/stockholm_missing_reference_items' 2023-08-02T23:10:26,393 adding 'skbio/io/format/tests/data/stockholm_missing_rn_tag' 2023-08-02T23:10:26,394 adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_no_id' 2023-08-02T23:10:26,395 adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_with_id' 2023-08-02T23:10:26,396 adding 'skbio/io/format/tests/data/stockholm_multiple_msa' 2023-08-02T23:10:26,397 adding 'skbio/io/format/tests/data/stockholm_multiple_multi_line_trees' 2023-08-02T23:10:26,398 adding 'skbio/io/format/tests/data/stockholm_multiple_references' 2023-08-02T23:10:26,399 adding 'skbio/io/format/tests/data/stockholm_multiple_trees' 2023-08-02T23:10:26,400 adding 'skbio/io/format/tests/data/stockholm_no_data' 2023-08-02T23:10:26,401 adding 'skbio/io/format/tests/data/stockholm_nonstring_labels' 2023-08-02T23:10:26,403 adding 'skbio/io/format/tests/data/stockholm_rna' 2023-08-02T23:10:26,404 adding 'skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace' 2023-08-02T23:10:26,405 adding 'skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace' 2023-08-02T23:10:26,406 adding 'skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace' 2023-08-02T23:10:26,407 adding 'skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace' 2023-08-02T23:10:26,408 adding 'skbio/io/format/tests/data/stockholm_runon_references' 2023-08-02T23:10:26,409 adding 'skbio/io/format/tests/data/stockholm_runon_references_mixed' 2023-08-02T23:10:26,411 adding 'skbio/io/format/tests/data/stockholm_single_reference' 2023-08-02T23:10:26,412 adding 'skbio/io/format/tests/data/stockholm_single_tree_with_id' 2023-08-02T23:10:26,413 adding 'skbio/io/format/tests/data/stockholm_single_tree_without_id' 2023-08-02T23:10:26,414 adding 'skbio/io/format/tests/data/stockholm_two_of_each_metadata' 2023-08-02T23:10:26,415 adding 'skbio/io/format/tests/data/stockholm_whitespace_only_lines' 2023-08-02T23:10:26,416 adding 'skbio/io/format/tests/data/taxdump_names.dmp' 2023-08-02T23:10:26,417 adding 'skbio/io/format/tests/data/taxdump_nodes.dmp' 2023-08-02T23:10:26,419 adding 'skbio/io/format/tests/data/tsv_10_fields' 2023-08-02T23:10:26,420 adding 'skbio/io/format/tests/data/tsv_8_fields' 2023-08-02T23:10:26,421 adding 'skbio/io/format/tests/data/whitespace_only' 2023-08-02T23:10:26,422 adding 'skbio/io/format/tests/data/wrapping_as_illumina.fastq' 2023-08-02T23:10:26,423 adding 'skbio/io/format/tests/data/wrapping_as_sanger.fastq' 2023-08-02T23:10:26,424 adding 'skbio/io/format/tests/data/wrapping_original_sanger.fastq' 2023-08-02T23:10:26,426 adding 'skbio/io/tests/__init__.py' 2023-08-02T23:10:26,428 adding 'skbio/io/tests/test_iosources.py' 2023-08-02T23:10:26,432 adding 'skbio/io/tests/test_registry.py' 2023-08-02T23:10:26,435 adding 'skbio/io/tests/test_util.py' 2023-08-02T23:10:26,437 adding 'skbio/io/tests/data/big5_file' 2023-08-02T23:10:26,438 adding 'skbio/io/tests/data/big5_file.bz2' 2023-08-02T23:10:26,439 adding 'skbio/io/tests/data/big5_file.gz' 2023-08-02T23:10:26,440 adding 'skbio/io/tests/data/example_file' 2023-08-02T23:10:26,442 adding 'skbio/io/tests/data/example_file.bz2' 2023-08-02T23:10:26,443 adding 'skbio/io/tests/data/example_file.gz' 2023-08-02T23:10:26,444 adding 'skbio/io/tests/data/real_file' 2023-08-02T23:10:26,445 adding 'skbio/io/tests/data/real_file_2' 2023-08-02T23:10:26,446 adding 'skbio/metadata/__init__.py' 2023-08-02T23:10:26,577 adding 'skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so' 2023-08-02T23:10:26,585 adding 'skbio/metadata/_interval.py' 2023-08-02T23:10:26,588 adding 'skbio/metadata/_mixin.py' 2023-08-02T23:10:26,590 adding 'skbio/metadata/_repr.py' 2023-08-02T23:10:26,593 adding 'skbio/metadata/_testing.py' 2023-08-02T23:10:26,595 adding 'skbio/metadata/tests/__init__.py' 2023-08-02T23:10:26,597 adding 'skbio/metadata/tests/test_intersection.py' 2023-08-02T23:10:26,600 adding 'skbio/metadata/tests/test_interval.py' 2023-08-02T23:10:26,602 adding 'skbio/metadata/tests/test_mixin.py' 2023-08-02T23:10:26,604 adding 'skbio/sequence/__init__.py' 2023-08-02T23:10:26,606 adding 'skbio/sequence/_dna.py' 2023-08-02T23:10:26,609 adding 'skbio/sequence/_genetic_code.py' 2023-08-02T23:10:26,612 adding 'skbio/sequence/_grammared_sequence.py' 2023-08-02T23:10:26,614 adding 'skbio/sequence/_nucleotide_mixin.py' 2023-08-02T23:10:26,616 adding 'skbio/sequence/_protein.py' 2023-08-02T23:10:26,617 adding 'skbio/sequence/_repr.py' 2023-08-02T23:10:26,619 adding 'skbio/sequence/_rna.py' 2023-08-02T23:10:26,628 adding 'skbio/sequence/_sequence.py' 2023-08-02T23:10:26,630 adding 'skbio/sequence/distance.py' 2023-08-02T23:10:26,631 adding 'skbio/sequence/tests/__init__.py' 2023-08-02T23:10:26,633 adding 'skbio/sequence/tests/test_distance.py' 2023-08-02T23:10:26,634 adding 'skbio/sequence/tests/test_dna.py' 2023-08-02T23:10:26,637 adding 'skbio/sequence/tests/test_genetic_code.py' 2023-08-02T23:10:26,639 adding 'skbio/sequence/tests/test_grammared_sequence.py' 2023-08-02T23:10:26,642 adding 'skbio/sequence/tests/test_nucleotide_sequences.py' 2023-08-02T23:10:26,643 adding 'skbio/sequence/tests/test_protein.py' 2023-08-02T23:10:26,645 adding 'skbio/sequence/tests/test_rna.py' 2023-08-02T23:10:26,653 adding 'skbio/sequence/tests/test_sequence.py' 2023-08-02T23:10:26,656 adding 'skbio/stats/__init__.py' 2023-08-02T23:10:26,689 adding 'skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so' 2023-08-02T23:10:26,691 adding 'skbio/stats/_misc.py' 2023-08-02T23:10:26,693 adding 'skbio/stats/_subsample.py' 2023-08-02T23:10:26,699 adding 'skbio/stats/composition.py' 2023-08-02T23:10:26,703 adding 'skbio/stats/gradient.py' 2023-08-02T23:10:26,709 adding 'skbio/stats/power.py' 2023-08-02T23:10:26,712 adding 'skbio/stats/distance/__init__.py' 2023-08-02T23:10:26,714 adding 'skbio/stats/distance/_anosim.py' 2023-08-02T23:10:26,720 adding 'skbio/stats/distance/_base.py' 2023-08-02T23:10:26,722 adding 'skbio/stats/distance/_bioenv.py' 2023-08-02T23:10:26,973 adding 'skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so' 2023-08-02T23:10:26,985 adding 'skbio/stats/distance/_mantel.py' 2023-08-02T23:10:26,986 adding 'skbio/stats/distance/_permanova.py' 2023-08-02T23:10:26,989 adding 'skbio/stats/distance/_permdisp.py' 2023-08-02T23:10:26,990 adding 'skbio/stats/distance/_utils.py' 2023-08-02T23:10:26,992 adding 'skbio/stats/distance/tests/__init__.py' 2023-08-02T23:10:26,994 adding 'skbio/stats/distance/tests/test_anosim.py' 2023-08-02T23:10:26,998 adding 'skbio/stats/distance/tests/test_base.py' 2023-08-02T23:10:27,000 adding 'skbio/stats/distance/tests/test_bioenv.py' 2023-08-02T23:10:27,003 adding 'skbio/stats/distance/tests/test_mantel.py' 2023-08-02T23:10:27,005 adding 'skbio/stats/distance/tests/test_permanova.py' 2023-08-02T23:10:27,007 adding 'skbio/stats/distance/tests/test_permdisp.py' 2023-08-02T23:10:27,009 adding 'skbio/stats/distance/tests/data/bioenv_df_vegan.txt' 2023-08-02T23:10:27,011 adding 'skbio/stats/distance/tests/data/bioenv_dm_vegan.txt' 2023-08-02T23:10:27,012 adding 'skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt' 2023-08-02T23:10:27,014 adding 'skbio/stats/distance/tests/data/df.txt' 2023-08-02T23:10:27,015 adding 'skbio/stats/distance/tests/data/df_extra_column.txt' 2023-08-02T23:10:27,016 adding 'skbio/stats/distance/tests/data/dm.txt' 2023-08-02T23:10:27,017 adding 'skbio/stats/distance/tests/data/dm2.txt' 2023-08-02T23:10:27,019 adding 'skbio/stats/distance/tests/data/dm3.txt' 2023-08-02T23:10:27,020 adding 'skbio/stats/distance/tests/data/dm4.txt' 2023-08-02T23:10:27,021 adding 'skbio/stats/distance/tests/data/dm_reordered.txt' 2023-08-02T23:10:27,022 adding 'skbio/stats/distance/tests/data/exp_results.txt' 2023-08-02T23:10:27,023 adding 'skbio/stats/distance/tests/data/exp_results_different_column_order.txt' 2023-08-02T23:10:27,025 adding 'skbio/stats/distance/tests/data/exp_results_single_column.txt' 2023-08-02T23:10:27,026 adding 'skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt' 2023-08-02T23:10:27,029 adding 'skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt' 2023-08-02T23:10:27,032 adding 'skbio/stats/distance/tests/data/moving_pictures_dm.tsv' 2023-08-02T23:10:27,033 adding 'skbio/stats/distance/tests/data/moving_pictures_mf.tsv' 2023-08-02T23:10:27,035 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt' 2023-08-02T23:10:27,036 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt' 2023-08-02T23:10:27,037 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt' 2023-08-02T23:10:27,038 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt' 2023-08-02T23:10:27,039 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt' 2023-08-02T23:10:27,041 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt' 2023-08-02T23:10:27,042 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt' 2023-08-02T23:10:27,044 adding 'skbio/stats/evolve/__init__.py' 2023-08-02T23:10:27,046 adding 'skbio/stats/evolve/_hommola.py' 2023-08-02T23:10:27,048 adding 'skbio/stats/evolve/tests/__init__.py' 2023-08-02T23:10:27,049 adding 'skbio/stats/evolve/tests/test_hommola.py' 2023-08-02T23:10:27,052 adding 'skbio/stats/ordination/__init__.py' 2023-08-02T23:10:27,054 adding 'skbio/stats/ordination/_canonical_correspondence_analysis.py' 2023-08-02T23:10:27,055 adding 'skbio/stats/ordination/_correspondence_analysis.py' 2023-08-02T23:10:27,295 adding 'skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so' 2023-08-02T23:10:27,305 adding 'skbio/stats/ordination/_ordination_results.py' 2023-08-02T23:10:27,308 adding 'skbio/stats/ordination/_principal_coordinate_analysis.py' 2023-08-02T23:10:27,310 adding 'skbio/stats/ordination/_redundancy_analysis.py' 2023-08-02T23:10:27,312 adding 'skbio/stats/ordination/_utils.py' 2023-08-02T23:10:27,314 adding 'skbio/stats/ordination/tests/__init__.py' 2023-08-02T23:10:27,315 adding 'skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py' 2023-08-02T23:10:27,317 adding 'skbio/stats/ordination/tests/test_correspondence_analysis.py' 2023-08-02T23:10:27,319 adding 'skbio/stats/ordination/tests/test_ordination_results.py' 2023-08-02T23:10:27,321 adding 'skbio/stats/ordination/tests/test_principal_coordinate_analysis.py' 2023-08-02T23:10:27,323 adding 'skbio/stats/ordination/tests/test_redundancy_analysis.py' 2023-08-02T23:10:27,325 adding 'skbio/stats/ordination/tests/test_util.py' 2023-08-02T23:10:27,327 adding 'skbio/stats/ordination/tests/data/L&L_CA_data' 2023-08-02T23:10:27,329 adding 'skbio/stats/ordination/tests/data/PCoA_biplot_descriptors' 2023-08-02T23:10:27,330 adding 'skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors' 2023-08-02T23:10:27,331 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data' 2023-08-02T23:10:27,333 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_12dim' 2023-08-02T23:10:27,334 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_2' 2023-08-02T23:10:27,335 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3' 2023-08-02T23:10:27,336 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim' 2023-08-02T23:10:27,338 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim' 2023-08-02T23:10:27,339 adding 'skbio/stats/ordination/tests/data/PCoA_skbio' 2023-08-02T23:10:27,340 adding 'skbio/stats/ordination/tests/data/example2_X' 2023-08-02T23:10:27,341 adding 'skbio/stats/ordination/tests/data/example2_Y' 2023-08-02T23:10:27,343 adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling1' 2023-08-02T23:10:27,344 adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling2' 2023-08-02T23:10:27,345 adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1' 2023-08-02T23:10:27,346 adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2' 2023-08-02T23:10:27,348 adding 'skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan' 2023-08-02T23:10:27,349 adding 'skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan' 2023-08-02T23:10:27,350 adding 'skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan' 2023-08-02T23:10:27,351 adding 'skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan' 2023-08-02T23:10:27,352 adding 'skbio/stats/ordination/tests/data/example3_X' 2023-08-02T23:10:27,353 adding 'skbio/stats/ordination/tests/data/example3_Y' 2023-08-02T23:10:27,355 adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling1' 2023-08-02T23:10:27,356 adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling2' 2023-08-02T23:10:27,357 adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1' 2023-08-02T23:10:27,358 adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2' 2023-08-02T23:10:27,360 adding 'skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan' 2023-08-02T23:10:27,361 adding 'skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan' 2023-08-02T23:10:27,362 adding 'skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan' 2023-08-02T23:10:27,363 adding 'skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan' 2023-08-02T23:10:27,365 adding 'skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site' 2023-08-02T23:10:27,366 adding 'skbio/stats/ordination/tests/data/exp_PCoAzeros_site' 2023-08-02T23:10:27,368 adding 'skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv' 2023-08-02T23:10:27,369 adding 'skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv' 2023-08-02T23:10:27,370 adding 'skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv' 2023-08-02T23:10:27,372 adding 'skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv' 2023-08-02T23:10:27,373 adding 'skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv' 2023-08-02T23:10:27,375 adding 'skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv' 2023-08-02T23:10:27,376 adding 'skbio/stats/ordination/tests/data/varechem.csv' 2023-08-02T23:10:27,378 adding 'skbio/stats/ordination/tests/data/varespec.csv' 2023-08-02T23:10:27,380 adding 'skbio/stats/tests/__init__.py' 2023-08-02T23:10:27,384 adding 'skbio/stats/tests/test_composition.py' 2023-08-02T23:10:27,388 adding 'skbio/stats/tests/test_gradient.py' 2023-08-02T23:10:27,390 adding 'skbio/stats/tests/test_misc.py' 2023-08-02T23:10:27,392 adding 'skbio/stats/tests/test_power.py' 2023-08-02T23:10:27,394 adding 'skbio/stats/tests/test_subsample.py' 2023-08-02T23:10:27,396 adding 'skbio/stats/tests/data/cr_data_out' 2023-08-02T23:10:27,397 adding 'skbio/stats/tests/data/cr_data_raw' 2023-08-02T23:10:27,399 adding 'skbio/stats/tests/data/cr_no_data_out' 2023-08-02T23:10:27,400 adding 'skbio/stats/tests/data/cr_no_data_raw' 2023-08-02T23:10:27,401 adding 'skbio/stats/tests/data/gr_w_msg_out' 2023-08-02T23:10:27,402 adding 'skbio/stats/tests/data/gr_w_msg_raw' 2023-08-02T23:10:27,403 adding 'skbio/stats/tests/data/gr_wo_msg_out' 2023-08-02T23:10:27,404 adding 'skbio/stats/tests/data/gr_wo_msg_raw' 2023-08-02T23:10:27,406 adding 'skbio/stats/tests/data/vr_out' 2023-08-02T23:10:27,407 adding 'skbio/stats/tests/data/vr_raw' 2023-08-02T23:10:27,408 adding 'skbio/stats/tests/data/vr_real_out' 2023-08-02T23:10:27,409 adding 'skbio/stats/tests/data/vr_real_raw' 2023-08-02T23:10:27,411 adding 'skbio/tests/__init__.py' 2023-08-02T23:10:27,412 adding 'skbio/tests/test_base.py' 2023-08-02T23:10:27,414 adding 'skbio/tests/test_workflow.py' 2023-08-02T23:10:27,416 adding 'skbio/tree/__init__.py' 2023-08-02T23:10:27,418 adding 'skbio/tree/_exception.py' 2023-08-02T23:10:27,420 adding 'skbio/tree/_majority_rule.py' 2023-08-02T23:10:27,422 adding 'skbio/tree/_nj.py' 2023-08-02T23:10:27,434 adding 'skbio/tree/_tree.py' 2023-08-02T23:10:27,437 adding 'skbio/tree/tests/__init__.py' 2023-08-02T23:10:27,438 adding 'skbio/tree/tests/test_majority_rule.py' 2023-08-02T23:10:27,440 adding 'skbio/tree/tests/test_nj.py' 2023-08-02T23:10:27,446 adding 'skbio/tree/tests/test_tree.py' 2023-08-02T23:10:27,448 adding 'skbio/util/__init__.py' 2023-08-02T23:10:27,450 adding 'skbio/util/_decorator.py' 2023-08-02T23:10:27,452 adding 'skbio/util/_exception.py' 2023-08-02T23:10:27,453 adding 'skbio/util/_misc.py' 2023-08-02T23:10:27,456 adding 'skbio/util/_testing.py' 2023-08-02T23:10:27,457 adding 'skbio/util/_warning.py' 2023-08-02T23:10:27,459 adding 'skbio/util/tests/__init__.py' 2023-08-02T23:10:27,461 adding 'skbio/util/tests/test_decorator.py' 2023-08-02T23:10:27,462 adding 'skbio/util/tests/test_misc.py' 2023-08-02T23:10:27,464 adding 'skbio/util/tests/test_testing.py' 2023-08-02T23:10:27,465 adding 'scikit_bio-0.5.9.dist-info/LICENSE.txt' 2023-08-02T23:10:27,467 adding 'scikit_bio-0.5.9.dist-info/METADATA' 2023-08-02T23:10:27,468 adding 'scikit_bio-0.5.9.dist-info/WHEEL' 2023-08-02T23:10:27,469 adding 'scikit_bio-0.5.9.dist-info/top_level.txt' 2023-08-02T23:10:27,479 adding 'scikit_bio-0.5.9.dist-info/RECORD' 2023-08-02T23:10:27,515 removing build/bdist.linux-armv7l/wheel 2023-08-02T23:10:27,817 Building wheel for scikit-bio (pyproject.toml): finished with status 'done' 2023-08-02T23:10:27,883 Created wheel for scikit-bio: filename=scikit_bio-0.5.9-cp39-cp39-linux_armv7l.whl size=2481639 sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 2023-08-02T23:10:27,884 Stored in directory: /tmp/pip-ephem-wheel-cache-t16o5csv/wheels/01/4b/87/799e0e29e168e76cf7c49bacc229116c053a002c79b9f2486c 2023-08-02T23:10:27,915 Successfully built scikit-bio 2023-08-02T23:10:27,991 Removed build tracker: '/tmp/pip-build-tracker-h_xcgspo'