2023-08-03T02:34:46,660 Created temporary directory: /tmp/pip-build-tracker-a__7y9rq
2023-08-03T02:34:46,663 Initialized build tracking at /tmp/pip-build-tracker-a__7y9rq
2023-08-03T02:34:46,663 Created build tracker: /tmp/pip-build-tracker-a__7y9rq
2023-08-03T02:34:46,663 Entered build tracker: /tmp/pip-build-tracker-a__7y9rq
2023-08-03T02:34:46,665 Created temporary directory: /tmp/pip-wheel-e_g4xoan
2023-08-03T02:34:46,673 Created temporary directory: /tmp/pip-ephem-wheel-cache-c6yh9c30
2023-08-03T02:34:46,726 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-03T02:34:46,734 2 location(s) to search for versions of smallgenomeutilities:
2023-08-03T02:34:46,734 * https://pypi.org/simple/smallgenomeutilities/
2023-08-03T02:34:46,734 * https://www.piwheels.org/simple/smallgenomeutilities/
2023-08-03T02:34:46,735 Fetching project page and analyzing links: https://pypi.org/simple/smallgenomeutilities/
2023-08-03T02:34:46,736 Getting page https://pypi.org/simple/smallgenomeutilities/
2023-08-03T02:34:46,741 Found index url https://pypi.org/simple/
2023-08-03T02:34:46,933 Fetched page https://pypi.org/simple/smallgenomeutilities/ as application/vnd.pypi.simple.v1+json
2023-08-03T02:34:46,939   Found link https://files.pythonhosted.org/packages/16/30/b2b629f57a7e1d88c1be86ff30314988b458d70eda0d0c46ea91aa470e77/smallgenomeutilities-0.1.tar.gz (from https://pypi.org/simple/smallgenomeutilities/), version: 0.1
2023-08-03T02:34:46,940   Skipping link: No binaries permitted for smallgenomeutilities: https://files.pythonhosted.org/packages/a7/a9/64e76ab93a7eeb8be7dcbd89d445685b4809d33d0dcc79226de401b6705e/smallgenomeutilities-0.2-py3-none-any.whl (from https://pypi.org/simple/smallgenomeutilities/)
2023-08-03T02:34:46,940   Found link https://files.pythonhosted.org/packages/f8/e2/54b075294a3247595abf9f7d7314eddc04c77a049398157514b65087fe6a/smallgenomeutilities-0.2.tar.gz (from https://pypi.org/simple/smallgenomeutilities/), version: 0.2
2023-08-03T02:34:46,941   Skipping link: No binaries permitted for smallgenomeutilities: https://files.pythonhosted.org/packages/46/20/dc6806fb9ee6714c06aa3e65149e840d562567b3d9ed66dc5fdfea471ab4/smallgenomeutilities-0.2.1-py3-none-any.whl (from https://pypi.org/simple/smallgenomeutilities/)
2023-08-03T02:34:46,942   Found link https://files.pythonhosted.org/packages/a3/9c/4b90373c6347be8f70d9c582f40d2709ce87ab038fb7cf89e4c3472380e0/smallgenomeutilities-0.2.1.tar.gz (from https://pypi.org/simple/smallgenomeutilities/), version: 0.2.1
2023-08-03T02:34:46,942   Skipping link: No binaries permitted for smallgenomeutilities: https://files.pythonhosted.org/packages/ff/45/bacabada0c0cab8ebdef1ed87f4f0c041da2b6d7bc3c8b8fdae999ebf364/smallgenomeutilities-0.3.0-py3-none-any.whl (from https://pypi.org/simple/smallgenomeutilities/)
2023-08-03T02:34:46,943   Found link https://files.pythonhosted.org/packages/4d/43/7fdabcf4fee88fca8f1d66d548d77df70312f2b6f974b6a2d7e568b17914/smallgenomeutilities-0.3.0.tar.gz (from https://pypi.org/simple/smallgenomeutilities/), version: 0.3.0
2023-08-03T02:34:46,943   Skipping link: No binaries permitted for smallgenomeutilities: https://files.pythonhosted.org/packages/36/36/6d0cffe6b2c8992386f68c368b24227d4934e3ddd6c53c820610132b56e4/smallgenomeutilities-0.4.0-py3-none-any.whl (from https://pypi.org/simple/smallgenomeutilities/) (requires-python:>=3.7)
2023-08-03T02:34:46,945   Found link https://files.pythonhosted.org/packages/1e/77/8ea697034e10e42f1d2b4800063531ceb3599bc3fb9a8b25c94c2c37622b/smallgenomeutilities-0.4.0.tar.gz (from https://pypi.org/simple/smallgenomeutilities/) (requires-python:>=3.7), version: 0.4.0
2023-08-03T02:34:46,946 Fetching project page and analyzing links: https://www.piwheels.org/simple/smallgenomeutilities/
2023-08-03T02:34:46,946 Getting page https://www.piwheels.org/simple/smallgenomeutilities/
2023-08-03T02:34:46,949 Found index url https://www.piwheels.org/simple/
2023-08-03T02:34:47,167 Fetched page https://www.piwheels.org/simple/smallgenomeutilities/ as text/html
2023-08-03T02:34:47,173   Skipping link: No binaries permitted for smallgenomeutilities: https://www.piwheels.org/simple/smallgenomeutilities/smallgenomeutilities-0.3.0-py3-none-any.whl#sha256=7345eaf9928bc8e5ceefdbe1006e7a5feff83db6344087502f76c6a7df54a923 (from https://www.piwheels.org/simple/smallgenomeutilities/)
2023-08-03T02:34:47,173   Skipping link: No binaries permitted for smallgenomeutilities: https://www.piwheels.org/simple/smallgenomeutilities/smallgenomeutilities-0.2.1-py3-none-any.whl#sha256=3268f0074ae0d03478f3bab89461209c099243f81816afc80cfd3ebe7eb261e1 (from https://www.piwheels.org/simple/smallgenomeutilities/)
2023-08-03T02:34:47,174   Skipping link: No binaries permitted for smallgenomeutilities: https://www.piwheels.org/simple/smallgenomeutilities/smallgenomeutilities-0.2-py3-none-any.whl#sha256=e1c515f237e091c09aa74a37ad3b8bbf6c04be35a9a8fac541da2617d7c07307 (from https://www.piwheels.org/simple/smallgenomeutilities/)
2023-08-03T02:34:47,174   Skipping link: No binaries permitted for smallgenomeutilities: https://www.piwheels.org/simple/smallgenomeutilities/smallgenomeutilities-0.1-py3-none-any.whl#sha256=23c27ec962745bdd0aa775c2c604bbd5aca90d10eb88afc989f1092612acfa8d (from https://www.piwheels.org/simple/smallgenomeutilities/)
2023-08-03T02:34:47,175 Skipping link: not a file: https://www.piwheels.org/simple/smallgenomeutilities/
2023-08-03T02:34:47,175 Skipping link: not a file: https://pypi.org/simple/smallgenomeutilities/
2023-08-03T02:34:47,210 Given no hashes to check 1 links for project 'smallgenomeutilities': discarding no candidates
2023-08-03T02:34:47,242 Collecting smallgenomeutilities==0.4.0
2023-08-03T02:34:47,246   Created temporary directory: /tmp/pip-unpack-6kmish6_
2023-08-03T02:34:47,441   Downloading smallgenomeutilities-0.4.0.tar.gz (69.3 MB)
2023-08-03T02:35:10,682   Added smallgenomeutilities==0.4.0 from https://files.pythonhosted.org/packages/1e/77/8ea697034e10e42f1d2b4800063531ceb3599bc3fb9a8b25c94c2c37622b/smallgenomeutilities-0.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-a__7y9rq'
2023-08-03T02:35:10,700   Created temporary directory: /tmp/pip-build-env-uft1jt0s
2023-08-03T02:35:10,721   Installing build dependencies: started
2023-08-03T02:35:10,723   Running command pip subprocess to install build dependencies
2023-08-03T02:35:13,445   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-08-03T02:35:14,244   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-03T02:35:19,286   Collecting setuptools>=63
2023-08-03T02:35:20,494     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB)
2023-08-03T02:35:21,381   Collecting setuptools_scm[toml]>=6.2
2023-08-03T02:35:21,417     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB)
2023-08-03T02:35:22,293   Collecting packaging>=20.0 (from setuptools_scm[toml]>=6.2)
2023-08-03T02:35:22,327     Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB)
2023-08-03T02:35:22,603   Collecting typing-extensions (from setuptools_scm[toml]>=6.2)
2023-08-03T02:35:22,659     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.7.1-py3-none-any.whl (33 kB)
2023-08-03T02:35:22,924   Collecting tomli>=1.0.0 (from setuptools_scm[toml]>=6.2)
2023-08-03T02:35:22,957     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-08-03T02:35:23,478     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/cc/37/db7ba97e676af155f5fcb1a35466f446eadc9104e25b83366e8088c9c926/importlib_metadata-6.8.0-py3-none-any.whl (from https://pypi.org/simple/importlib-metadata/) (requires-python:>=3.8)
2023-08-03T02:35:23,481     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/33/44/ae06b446b8d8263d712a211e959212083a5eda2bf36d57ca7415e03f6f36/importlib_metadata-6.8.0.tar.gz (from https://pypi.org/simple/importlib-metadata/) (requires-python:>=3.8)
2023-08-03T02:35:23,602     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.8.0-py3-none-any.whl#sha256=eee927b02daa5ef8a9da352c7edb8d87e3b0fb0ac03c36ec3b0c16a735819c74 (from https://www.piwheels.org/simple/importlib-metadata/) (requires-python:>=3.8)
2023-08-03T02:35:23,985   Collecting importlib-metadata (from setuptools_scm[toml]>=6.2)
2023-08-03T02:35:24,018     Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.7.0-py3-none-any.whl (22 kB)
2023-08-03T02:35:25,332     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ad/be/a6c11f5e0c042fb97e6b567730f55c56b2fe4089304ae66207a54fa49d7e/zipp-3.16.0-py3-none-any.whl (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,335     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/52/9a/d93b483b9a744e7f71b311ee9bb5a228f6846219ceb5d6dbcb3eddcd1932/zipp-3.16.0.tar.gz (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,338     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/a1/3b/385e3b43200af0b9a13d03c234efbd9d40c6d73ab63fde1c097a2daacdea/zipp-3.16.1-py3-none-any.whl (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,341     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ef/76/5a9e1553f00ee55a6de6b3c176aa4c859c7f64b9bbdc48804df174dee890/zipp-3.16.1.tar.gz (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,344     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/8c/08/d3006317aefe25ea79d3b76c9650afabaf6d63d1c8443b236e7405447503/zipp-3.16.2-py3-none-any.whl (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,347     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e2/45/f3b987ad5bf9e08095c1ebe6352238be36f25dd106fde424a160061dce6d/zipp-3.16.2.tar.gz (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,416     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.16.2-py3-none-any.whl#sha256=ffebb2bccce49efecaa7b6d4d273d64e047c4d0ea72b6f04c05a11a9f49a753d (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,419     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.16.1-py3-none-any.whl#sha256=8ba47289cfe5ead30d0cda58334ebb39b0e27609aaa680c24d2323927fd8696e (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,423     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.16.0-py3-none-any.whl#sha256=1338e8df1aff24947954617867855699925e8e9e87e75e0853a68fe6cc2b646b (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2023-08-03T02:35:25,596   Collecting zipp>=0.5 (from importlib-metadata->setuptools_scm[toml]>=6.2)
2023-08-03T02:35:25,627     Using cached https://www.piwheels.org/simple/zipp/zipp-3.15.0-py3-none-any.whl (6.8 kB)
2023-08-03T02:35:31,317   Installing collected packages: zipp, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm
2023-08-03T02:35:36,619   Successfully installed importlib-metadata-6.7.0 packaging-23.1 setuptools-68.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.7.1 zipp-3.15.0

2023-08-03T02:35:36,652   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-08-03T02:35:36,653   [notice] To update, run: python3 -m pip install --upgrade pip
2023-08-03T02:35:37,140   Installing build dependencies: finished with status 'done'
2023-08-03T02:35:37,152   Getting requirements to build wheel: started
2023-08-03T02:35:37,154   Running command Getting requirements to build wheel
2023-08-03T02:35:39,362   running egg_info
2023-08-03T02:35:39,376   writing smallgenomeutilities.egg-info/PKG-INFO
2023-08-03T02:35:39,383   writing dependency_links to smallgenomeutilities.egg-info/dependency_links.txt
2023-08-03T02:35:39,387   writing requirements to smallgenomeutilities.egg-info/requires.txt
2023-08-03T02:35:39,389   writing top-level names to smallgenomeutilities.egg-info/top_level.txt
2023-08-03T02:35:39,508   /tmp/pip-build-env-uft1jt0s/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-08-03T02:35:39,508     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-08-03T02:35:39,509   listing git files failed - pretending there aren't any
2023-08-03T02:35:39,591   adding license file 'LICENSE'
2023-08-03T02:35:39,606   writing manifest file 'smallgenomeutilities.egg-info/SOURCES.txt'
2023-08-03T02:35:39,815   Getting requirements to build wheel: finished with status 'done'
2023-08-03T02:35:39,854   Installing backend dependencies: started
2023-08-03T02:35:39,856   Running command pip subprocess to install backend dependencies
2023-08-03T02:35:42,701   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-08-03T02:35:43,555   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-03T02:35:44,437   Collecting wheel
2023-08-03T02:35:44,478     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.0-py3-none-any.whl (64 kB)
2023-08-03T02:35:49,091   Installing collected packages: wheel
2023-08-03T02:35:49,539     Creating /tmp/pip-build-env-uft1jt0s/normal/bin
2023-08-03T02:35:49,543     changing mode of /tmp/pip-build-env-uft1jt0s/normal/bin/wheel to 755
2023-08-03T02:35:49,569   Successfully installed wheel-0.41.0

2023-08-03T02:35:49,599   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-08-03T02:35:49,599   [notice] To update, run: python3 -m pip install --upgrade pip
2023-08-03T02:35:49,959   Installing backend dependencies: finished with status 'done'
2023-08-03T02:35:49,964   Created temporary directory: /tmp/pip-modern-metadata-r1vo2i2n
2023-08-03T02:35:49,971   Preparing metadata (pyproject.toml): started
2023-08-03T02:35:49,973   Running command Preparing metadata (pyproject.toml)
2023-08-03T02:35:52,155   running dist_info
2023-08-03T02:35:52,171   creating /tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info
2023-08-03T02:35:52,185   writing /tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info/PKG-INFO
2023-08-03T02:35:52,191   writing dependency_links to /tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info/dependency_links.txt
2023-08-03T02:35:52,196   writing requirements to /tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info/requires.txt
2023-08-03T02:35:52,198   writing top-level names to /tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info/top_level.txt
2023-08-03T02:35:52,201   writing manifest file '/tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info/SOURCES.txt'
2023-08-03T02:35:52,321   /tmp/pip-build-env-uft1jt0s/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-08-03T02:35:52,322     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-08-03T02:35:52,322   listing git files failed - pretending there aren't any
2023-08-03T02:35:52,424   adding license file 'LICENSE'
2023-08-03T02:35:52,439   writing manifest file '/tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities.egg-info/SOURCES.txt'
2023-08-03T02:35:52,444   creating '/tmp/pip-modern-metadata-r1vo2i2n/smallgenomeutilities-0.4.0.dist-info'
2023-08-03T02:35:52,754   Preparing metadata (pyproject.toml): finished with status 'done'
2023-08-03T02:35:52,775   Source in /tmp/pip-wheel-e_g4xoan/smallgenomeutilities_7ba5ae0692f140debeb5b833e4eb22e3 has version 0.4.0, which satisfies requirement smallgenomeutilities==0.4.0 from https://files.pythonhosted.org/packages/1e/77/8ea697034e10e42f1d2b4800063531ceb3599bc3fb9a8b25c94c2c37622b/smallgenomeutilities-0.4.0.tar.gz
2023-08-03T02:35:52,777   Removed smallgenomeutilities==0.4.0 from https://files.pythonhosted.org/packages/1e/77/8ea697034e10e42f1d2b4800063531ceb3599bc3fb9a8b25c94c2c37622b/smallgenomeutilities-0.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-a__7y9rq'
2023-08-03T02:35:52,797 Created temporary directory: /tmp/pip-unpack-pvu7_4qg
2023-08-03T02:35:52,799 Building wheels for collected packages: smallgenomeutilities
2023-08-03T02:35:52,809   Created temporary directory: /tmp/pip-wheel-x0cp31mg
2023-08-03T02:35:52,809   Destination directory: /tmp/pip-wheel-x0cp31mg
2023-08-03T02:35:52,814   Building wheel for smallgenomeutilities (pyproject.toml): started
2023-08-03T02:35:52,817   Running command Building wheel for smallgenomeutilities (pyproject.toml)
2023-08-03T02:35:54,857   running bdist_wheel
2023-08-03T02:35:54,907   running build
2023-08-03T02:35:54,908   running build_py
2023-08-03T02:35:54,924   creating build
2023-08-03T02:35:54,925   creating build/lib
2023-08-03T02:35:54,926   creating build/lib/smallgenomeutilities
2023-08-03T02:35:54,929   copying smallgenomeutilities/__pileup__.py -> build/lib/smallgenomeutilities
2023-08-03T02:35:54,934   copying smallgenomeutilities/__mapper_impl__.py -> build/lib/smallgenomeutilities
2023-08-03T02:35:54,937   copying smallgenomeutilities/__checkPath__.py -> build/lib/smallgenomeutilities
2023-08-03T02:35:54,940   copying smallgenomeutilities/_version.py -> build/lib/smallgenomeutilities
2023-08-03T02:35:54,943   copying smallgenomeutilities/__init__.py -> build/lib/smallgenomeutilities
2023-08-03T02:35:54,945   running egg_info
2023-08-03T02:35:54,973   writing smallgenomeutilities.egg-info/PKG-INFO
2023-08-03T02:35:54,979   writing dependency_links to smallgenomeutilities.egg-info/dependency_links.txt
2023-08-03T02:35:54,982   writing requirements to smallgenomeutilities.egg-info/requires.txt
2023-08-03T02:35:54,984   writing top-level names to smallgenomeutilities.egg-info/top_level.txt
2023-08-03T02:35:55,059   /tmp/pip-build-env-uft1jt0s/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-08-03T02:35:55,060     config = read_configuration(filepath, True, ignore_option_errors, dist)
2023-08-03T02:35:55,060   listing git files failed - pretending there aren't any
2023-08-03T02:35:55,146   adding license file 'LICENSE'
2023-08-03T02:35:55,161   writing manifest file 'smallgenomeutilities.egg-info/SOURCES.txt'
2023-08-03T02:35:55,174   running build_scripts
2023-08-03T02:35:55,176   creating build/scripts-3.7
2023-08-03T02:35:55,179   copying and adjusting scripts/aln2basecnt -> build/scripts-3.7
2023-08-03T02:35:55,185   copying and adjusting scripts/compute_mds -> build/scripts-3.7
2023-08-03T02:35:55,191   copying and adjusting scripts/convert_qr -> build/scripts-3.7
2023-08-03T02:35:55,194   copying and adjusting scripts/convert_reference -> build/scripts-3.7
2023-08-03T02:35:55,201   copying and adjusting scripts/coverage -> build/scripts-3.7
2023-08-03T02:35:55,205   copying and adjusting scripts/coverage_stats -> build/scripts-3.7
2023-08-03T02:35:55,208   copying and adjusting scripts/extract_consensus -> build/scripts-3.7
2023-08-03T02:35:55,213   copying and adjusting scripts/extract_coverage_intervals -> build/scripts-3.7
2023-08-03T02:35:55,218   copying and adjusting scripts/extract_sam -> build/scripts-3.7
2023-08-03T02:35:55,222   copying and adjusting scripts/extract_seq -> build/scripts-3.7
2023-08-03T02:35:55,225   copying and adjusting scripts/frameshift_deletions_checks -> build/scripts-3.7
2023-08-03T02:35:55,233   copying and adjusting scripts/gather_coverage -> build/scripts-3.7
2023-08-03T02:35:55,236   copying and adjusting scripts/mapper -> build/scripts-3.7
2023-08-03T02:35:55,239   copying and adjusting scripts/min_coverage -> build/scripts-3.7
2023-08-03T02:35:55,243   copying and adjusting scripts/minority_freq -> build/scripts-3.7
2023-08-03T02:35:55,247   copying and adjusting scripts/pair_sequences -> build/scripts-3.7
2023-08-03T02:35:55,251   copying and adjusting scripts/predict_num_reads -> build/scripts-3.7
2023-08-03T02:35:55,255   copying and adjusting scripts/prepare_primers -> build/scripts-3.7
2023-08-03T02:35:55,259   copying and adjusting scripts/remove_gaps_msa -> build/scripts-3.7
2023-08-03T02:35:55,262   changing mode of build/scripts-3.7/aln2basecnt from 644 to 755
2023-08-03T02:35:55,263   changing mode of build/scripts-3.7/compute_mds from 644 to 755
2023-08-03T02:35:55,265   changing mode of build/scripts-3.7/convert_qr from 644 to 755
2023-08-03T02:35:55,266   changing mode of build/scripts-3.7/convert_reference from 644 to 755
2023-08-03T02:35:55,267   changing mode of build/scripts-3.7/coverage from 644 to 755
2023-08-03T02:35:55,268   changing mode of build/scripts-3.7/coverage_stats from 644 to 755
2023-08-03T02:35:55,269   changing mode of build/scripts-3.7/extract_consensus from 644 to 755
2023-08-03T02:35:55,270   changing mode of build/scripts-3.7/extract_coverage_intervals from 644 to 755
2023-08-03T02:35:55,271   changing mode of build/scripts-3.7/extract_sam from 644 to 755
2023-08-03T02:35:55,272   changing mode of build/scripts-3.7/extract_seq from 644 to 755
2023-08-03T02:35:55,273   changing mode of build/scripts-3.7/frameshift_deletions_checks from 644 to 755
2023-08-03T02:35:55,274   changing mode of build/scripts-3.7/gather_coverage from 644 to 755
2023-08-03T02:35:55,276   changing mode of build/scripts-3.7/mapper from 644 to 755
2023-08-03T02:35:55,277   changing mode of build/scripts-3.7/min_coverage from 644 to 755
2023-08-03T02:35:55,278   changing mode of build/scripts-3.7/minority_freq from 644 to 755
2023-08-03T02:35:55,279   changing mode of build/scripts-3.7/pair_sequences from 644 to 755
2023-08-03T02:35:55,280   changing mode of build/scripts-3.7/predict_num_reads from 644 to 755
2023-08-03T02:35:55,281   changing mode of build/scripts-3.7/prepare_primers from 644 to 755
2023-08-03T02:35:55,282   changing mode of build/scripts-3.7/remove_gaps_msa from 644 to 755
2023-08-03T02:35:55,315   installing to build/bdist.linux-armv7l/wheel
2023-08-03T02:35:55,316   running install
2023-08-03T02:35:55,376   running install_lib
2023-08-03T02:35:55,391   creating build/bdist.linux-armv7l
2023-08-03T02:35:55,392   creating build/bdist.linux-armv7l/wheel
2023-08-03T02:35:55,395   creating build/bdist.linux-armv7l/wheel/smallgenomeutilities
2023-08-03T02:35:55,397   copying build/lib/smallgenomeutilities/__pileup__.py -> build/bdist.linux-armv7l/wheel/smallgenomeutilities
2023-08-03T02:35:55,401   copying build/lib/smallgenomeutilities/__mapper_impl__.py -> build/bdist.linux-armv7l/wheel/smallgenomeutilities
2023-08-03T02:35:55,405   copying build/lib/smallgenomeutilities/__checkPath__.py -> build/bdist.linux-armv7l/wheel/smallgenomeutilities
2023-08-03T02:35:55,409   copying build/lib/smallgenomeutilities/_version.py -> build/bdist.linux-armv7l/wheel/smallgenomeutilities
2023-08-03T02:35:55,413   copying build/lib/smallgenomeutilities/__init__.py -> build/bdist.linux-armv7l/wheel/smallgenomeutilities
2023-08-03T02:35:55,415   running install_egg_info
2023-08-03T02:35:55,430   Copying smallgenomeutilities.egg-info to build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0-py3.7.egg-info
2023-08-03T02:35:55,451   running install_scripts
2023-08-03T02:35:55,454   creating build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data
2023-08-03T02:35:55,455   creating build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,457   copying build/scripts-3.7/compute_mds -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,462   copying build/scripts-3.7/extract_consensus -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,467   copying build/scripts-3.7/aln2basecnt -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,471   copying build/scripts-3.7/predict_num_reads -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,476   copying build/scripts-3.7/remove_gaps_msa -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,480   copying build/scripts-3.7/coverage -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,484   copying build/scripts-3.7/mapper -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,488   copying build/scripts-3.7/min_coverage -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,492   copying build/scripts-3.7/minority_freq -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,496   copying build/scripts-3.7/prepare_primers -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,500   copying build/scripts-3.7/extract_coverage_intervals -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,505   copying build/scripts-3.7/extract_seq -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,508   copying build/scripts-3.7/convert_qr -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,512   copying build/scripts-3.7/extract_sam -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,516   copying build/scripts-3.7/frameshift_deletions_checks -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,523   copying build/scripts-3.7/gather_coverage -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,526   copying build/scripts-3.7/coverage_stats -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,529   copying build/scripts-3.7/pair_sequences -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,533   copying build/scripts-3.7/convert_reference -> build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts
2023-08-03T02:35:55,538   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/compute_mds to 755
2023-08-03T02:35:55,539   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/extract_consensus to 755
2023-08-03T02:35:55,540   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/aln2basecnt to 755
2023-08-03T02:35:55,540   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/predict_num_reads to 755
2023-08-03T02:35:55,541   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/remove_gaps_msa to 755
2023-08-03T02:35:55,542   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/coverage to 755
2023-08-03T02:35:55,543   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/mapper to 755
2023-08-03T02:35:55,543   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/min_coverage to 755
2023-08-03T02:35:55,544   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/minority_freq to 755
2023-08-03T02:35:55,545   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/prepare_primers to 755
2023-08-03T02:35:55,545   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/extract_coverage_intervals to 755
2023-08-03T02:35:55,546   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/extract_seq to 755
2023-08-03T02:35:55,547   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/convert_qr to 755
2023-08-03T02:35:55,548   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/extract_sam to 755
2023-08-03T02:35:55,548   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/frameshift_deletions_checks to 755
2023-08-03T02:35:55,549   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/gather_coverage to 755
2023-08-03T02:35:55,550   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/coverage_stats to 755
2023-08-03T02:35:55,550   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/pair_sequences to 755
2023-08-03T02:35:55,551   changing mode of build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.data/scripts/convert_reference to 755
2023-08-03T02:35:55,599   creating build/bdist.linux-armv7l/wheel/smallgenomeutilities-0.4.0.dist-info/WHEEL
2023-08-03T02:35:55,604   creating '/tmp/pip-wheel-x0cp31mg/.tmp-vaahzixj/smallgenomeutilities-0.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-08-03T02:35:55,609   adding 'smallgenomeutilities/__checkPath__.py'
2023-08-03T02:35:55,612   adding 'smallgenomeutilities/__init__.py'
2023-08-03T02:35:55,615   adding 'smallgenomeutilities/__mapper_impl__.py'
2023-08-03T02:35:55,618   adding 'smallgenomeutilities/__pileup__.py'
2023-08-03T02:35:55,621   adding 'smallgenomeutilities/_version.py'
2023-08-03T02:35:55,627   adding 'smallgenomeutilities-0.4.0.data/scripts/aln2basecnt'
2023-08-03T02:35:55,631   adding 'smallgenomeutilities-0.4.0.data/scripts/compute_mds'
2023-08-03T02:35:55,635   adding 'smallgenomeutilities-0.4.0.data/scripts/convert_qr'
2023-08-03T02:35:55,642   adding 'smallgenomeutilities-0.4.0.data/scripts/convert_reference'
2023-08-03T02:35:55,646   adding 'smallgenomeutilities-0.4.0.data/scripts/coverage'
2023-08-03T02:35:55,648   adding 'smallgenomeutilities-0.4.0.data/scripts/coverage_stats'
2023-08-03T02:35:55,653   adding 'smallgenomeutilities-0.4.0.data/scripts/extract_consensus'
2023-08-03T02:35:55,657   adding 'smallgenomeutilities-0.4.0.data/scripts/extract_coverage_intervals'
2023-08-03T02:35:55,662   adding 'smallgenomeutilities-0.4.0.data/scripts/extract_sam'
2023-08-03T02:35:55,664   adding 'smallgenomeutilities-0.4.0.data/scripts/extract_seq'
2023-08-03T02:35:55,679   adding 'smallgenomeutilities-0.4.0.data/scripts/frameshift_deletions_checks'
2023-08-03T02:35:55,683   adding 'smallgenomeutilities-0.4.0.data/scripts/gather_coverage'
2023-08-03T02:35:55,686   adding 'smallgenomeutilities-0.4.0.data/scripts/mapper'
2023-08-03T02:35:55,689   adding 'smallgenomeutilities-0.4.0.data/scripts/min_coverage'
2023-08-03T02:35:55,693   adding 'smallgenomeutilities-0.4.0.data/scripts/minority_freq'
2023-08-03T02:35:55,697   adding 'smallgenomeutilities-0.4.0.data/scripts/pair_sequences'
2023-08-03T02:35:55,700   adding 'smallgenomeutilities-0.4.0.data/scripts/predict_num_reads'
2023-08-03T02:35:55,703   adding 'smallgenomeutilities-0.4.0.data/scripts/prepare_primers'
2023-08-03T02:35:55,706   adding 'smallgenomeutilities-0.4.0.data/scripts/remove_gaps_msa'
2023-08-03T02:35:55,715   adding 'smallgenomeutilities-0.4.0.dist-info/LICENSE'
2023-08-03T02:35:55,725   adding 'smallgenomeutilities-0.4.0.dist-info/METADATA'
2023-08-03T02:35:55,728   adding 'smallgenomeutilities-0.4.0.dist-info/WHEEL'
2023-08-03T02:35:55,729   adding 'smallgenomeutilities-0.4.0.dist-info/top_level.txt'
2023-08-03T02:35:55,732   adding 'smallgenomeutilities-0.4.0.dist-info/RECORD'
2023-08-03T02:35:55,738   removing build/bdist.linux-armv7l/wheel
2023-08-03T02:35:55,967   Building wheel for smallgenomeutilities (pyproject.toml): finished with status 'done'
2023-08-03T02:35:55,984   Created wheel for smallgenomeutilities: filename=smallgenomeutilities-0.4.0-py3-none-any.whl size=78210 sha256=9196cdb6e8015cb926befacb7842ebd0b89c754226d1c931f39e91930f159ba1
2023-08-03T02:35:55,986   Stored in directory: /tmp/pip-ephem-wheel-cache-c6yh9c30/wheels/61/da/a6/2e4f68c35672909250c2e78d8f9365c87e6a1e2108b1e7dacb
2023-08-03T02:35:56,025 Successfully built smallgenomeutilities
2023-08-03T02:35:56,037 Removed build tracker: '/tmp/pip-build-tracker-a__7y9rq'