2023-08-03T11:21:59,894 Created temporary directory: /tmp/pip-build-tracker-xtjukn0u 2023-08-03T11:21:59,896 Initialized build tracking at /tmp/pip-build-tracker-xtjukn0u 2023-08-03T11:21:59,896 Created build tracker: /tmp/pip-build-tracker-xtjukn0u 2023-08-03T11:21:59,896 Entered build tracker: /tmp/pip-build-tracker-xtjukn0u 2023-08-03T11:21:59,897 Created temporary directory: /tmp/pip-wheel-nx89q1md 2023-08-03T11:21:59,900 Created temporary directory: /tmp/pip-ephem-wheel-cache-k5mugdcb 2023-08-03T11:21:59,922 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-03T11:21:59,926 2 location(s) to search for versions of chromatinhd: 2023-08-03T11:21:59,926 * https://pypi.org/simple/chromatinhd/ 2023-08-03T11:21:59,926 * https://www.piwheels.org/simple/chromatinhd/ 2023-08-03T11:21:59,926 Fetching project page and analyzing links: https://pypi.org/simple/chromatinhd/ 2023-08-03T11:21:59,927 Getting page https://pypi.org/simple/chromatinhd/ 2023-08-03T11:21:59,928 Found index url https://pypi.org/simple/ 2023-08-03T11:21:59,979 Fetched page https://pypi.org/simple/chromatinhd/ as application/vnd.pypi.simple.v1+json 2023-08-03T11:21:59,980 Found link https://files.pythonhosted.org/packages/e9/a1/9bb9f5165fc1e15e24fb4443bee4e7981f00f30916c2072b983ba315d9b5/chromatinhd-0.0.17.tar.gz (from https://pypi.org/simple/chromatinhd/) (requires-python:>=3.8), version: 0.0.17 2023-08-03T11:21:59,981 Found link https://files.pythonhosted.org/packages/72/5b/c26d6af6225afc0756a522cd3e48acc3da4303d32213719cd2c9485fc922/chromatinhd-0.0.18.tar.gz (from https://pypi.org/simple/chromatinhd/) (requires-python:>=3.8), version: 0.0.18 2023-08-03T11:21:59,981 Found link https://files.pythonhosted.org/packages/37/f9/6b1068560b2425ea11a4a86d14b950330f39d169afcdd81712ec76c8dc4e/chromatinhd-0.0.19.tar.gz (from https://pypi.org/simple/chromatinhd/) (requires-python:>=3.8), version: 0.0.19 2023-08-03T11:21:59,982 Fetching project page and analyzing links: https://www.piwheels.org/simple/chromatinhd/ 2023-08-03T11:21:59,982 Getting page https://www.piwheels.org/simple/chromatinhd/ 2023-08-03T11:21:59,983 Found index url https://www.piwheels.org/simple/ 2023-08-03T11:22:00,192 Fetched page https://www.piwheels.org/simple/chromatinhd/ as text/html 2023-08-03T11:22:00,193 Skipping link: No binaries permitted for chromatinhd: https://www.piwheels.org/simple/chromatinhd/chromatinhd-0.0.18-py3-none-any.whl#sha256=23573599a830a53768757dc7623bc567b3b557ce172d3aa9600f406e72fee5a3 (from https://www.piwheels.org/simple/chromatinhd/) (requires-python:>=3.8) 2023-08-03T11:22:00,193 Skipping link: No binaries permitted for chromatinhd: https://www.piwheels.org/simple/chromatinhd/chromatinhd-0.0.17-py3-none-any.whl#sha256=3787563619f8fadde8cf19b8bf8cef4282b2e28896db72df387ae4e3c04d60bd (from https://www.piwheels.org/simple/chromatinhd/) (requires-python:>=3.8) 2023-08-03T11:22:00,194 Skipping link: not a file: https://www.piwheels.org/simple/chromatinhd/ 2023-08-03T11:22:00,194 Skipping link: not a file: https://pypi.org/simple/chromatinhd/ 2023-08-03T11:22:00,211 Given no hashes to check 1 links for project 'chromatinhd': discarding no candidates 2023-08-03T11:22:00,228 Collecting chromatinhd==0.0.19 2023-08-03T11:22:00,230 Created temporary directory: /tmp/pip-unpack-70g5y8a5 2023-08-03T11:22:00,276 Downloading chromatinhd-0.0.19.tar.gz (6.1 MB) 2023-08-03T11:22:01,255 Added chromatinhd==0.0.19 from https://files.pythonhosted.org/packages/37/f9/6b1068560b2425ea11a4a86d14b950330f39d169afcdd81712ec76c8dc4e/chromatinhd-0.0.19.tar.gz to build tracker '/tmp/pip-build-tracker-xtjukn0u' 2023-08-03T11:22:01,262 Created temporary directory: /tmp/pip-build-env-3ziemx9c 2023-08-03T11:22:01,272 Installing build dependencies: started 2023-08-03T11:22:01,273 Running command pip subprocess to install build dependencies 2023-08-03T11:22:02,483 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-08-03T11:22:02,881 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-03T11:22:04,616 Collecting setuptools>=41 2023-08-03T11:22:04,681 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-08-03T11:22:04,931 Collecting wheel 2023-08-03T11:22:04,949 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.0-py3-none-any.whl (64 kB) 2023-08-03T11:22:05,272 Collecting setuptools_scm[toml]>=6.2 2023-08-03T11:22:05,288 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-08-03T11:22:05,653 Collecting packaging>=20.0 (from setuptools_scm[toml]>=6.2) 2023-08-03T11:22:05,669 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-08-03T11:22:05,790 Collecting typing-extensions (from setuptools_scm[toml]>=6.2) 2023-08-03T11:22:05,806 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.7.1-py3-none-any.whl (33 kB) 2023-08-03T11:22:05,920 Collecting tomli>=1.0.0 (from setuptools_scm[toml]>=6.2) 2023-08-03T11:22:05,936 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-08-03T11:22:08,006 Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, setuptools_scm 2023-08-03T11:22:08,225 Creating /tmp/pip-build-env-3ziemx9c/overlay/bin 2023-08-03T11:22:08,228 changing mode of /tmp/pip-build-env-3ziemx9c/overlay/bin/wheel to 755 2023-08-03T11:22:10,746 Successfully installed packaging-23.1 setuptools-68.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.7.1 wheel-0.41.0 2023-08-03T11:22:10,760 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-08-03T11:22:10,760 [notice] To update, run: python3 -m pip install --upgrade pip 2023-08-03T11:22:11,038 Installing build dependencies: finished with status 'done' 2023-08-03T11:22:11,043 Getting requirements to build wheel: started 2023-08-03T11:22:11,044 Running command Getting requirements to build wheel 2023-08-03T11:22:11,609 /tmp/pip-build-env-3ziemx9c/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-08-03T11:22:11,610 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-08-03T11:22:11,984 running egg_info 2023-08-03T11:22:11,990 writing src/chromatinhd.egg-info/PKG-INFO 2023-08-03T11:22:11,992 writing dependency_links to src/chromatinhd.egg-info/dependency_links.txt 2023-08-03T11:22:11,995 writing requirements to src/chromatinhd.egg-info/requires.txt 2023-08-03T11:22:11,996 writing top-level names to src/chromatinhd.egg-info/top_level.txt 2023-08-03T11:22:12,057 listing git files failed - pretending there aren't any 2023-08-03T11:22:12,065 reading manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:12,075 adding license file 'LICENSE.md' 2023-08-03T11:22:12,084 writing manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:12,199 Getting requirements to build wheel: finished with status 'done' 2023-08-03T11:22:12,209 Created temporary directory: /tmp/pip-modern-metadata-4jhq9qx3 2023-08-03T11:22:12,212 Preparing metadata (pyproject.toml): started 2023-08-03T11:22:12,212 Running command Preparing metadata (pyproject.toml) 2023-08-03T11:22:12,765 /tmp/pip-build-env-3ziemx9c/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-08-03T11:22:12,765 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-08-03T11:22:13,112 running dist_info 2023-08-03T11:22:13,119 creating /tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info 2023-08-03T11:22:13,125 writing /tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/PKG-INFO 2023-08-03T11:22:13,127 writing dependency_links to /tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/dependency_links.txt 2023-08-03T11:22:13,129 writing requirements to /tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/requires.txt 2023-08-03T11:22:13,130 writing top-level names to /tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/top_level.txt 2023-08-03T11:22:13,131 writing manifest file '/tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:13,190 listing git files failed - pretending there aren't any 2023-08-03T11:22:13,198 reading manifest file '/tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:13,201 adding license file 'LICENSE.md' 2023-08-03T11:22:13,206 writing manifest file '/tmp/pip-modern-metadata-4jhq9qx3/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:13,208 creating '/tmp/pip-modern-metadata-4jhq9qx3/chromatinhd-0.0.19.dist-info' 2023-08-03T11:22:13,359 Preparing metadata (pyproject.toml): finished with status 'done' 2023-08-03T11:22:13,365 Source in /tmp/pip-wheel-nx89q1md/chromatinhd_f2510d5de66644139e10b77c6113a90c has version 0.0.19, which satisfies requirement chromatinhd==0.0.19 from https://files.pythonhosted.org/packages/37/f9/6b1068560b2425ea11a4a86d14b950330f39d169afcdd81712ec76c8dc4e/chromatinhd-0.0.19.tar.gz 2023-08-03T11:22:13,366 Removed chromatinhd==0.0.19 from https://files.pythonhosted.org/packages/37/f9/6b1068560b2425ea11a4a86d14b950330f39d169afcdd81712ec76c8dc4e/chromatinhd-0.0.19.tar.gz from build tracker '/tmp/pip-build-tracker-xtjukn0u' 2023-08-03T11:22:13,372 Created temporary directory: /tmp/pip-unpack-fd7_h0wk 2023-08-03T11:22:13,373 Building wheels for collected packages: chromatinhd 2023-08-03T11:22:13,376 Created temporary directory: /tmp/pip-wheel-4ddexsus 2023-08-03T11:22:13,377 Destination directory: /tmp/pip-wheel-4ddexsus 2023-08-03T11:22:13,379 Building wheel for chromatinhd (pyproject.toml): started 2023-08-03T11:22:13,380 Running command Building wheel for chromatinhd (pyproject.toml) 2023-08-03T11:22:13,887 /tmp/pip-build-env-3ziemx9c/overlay/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. 2023-08-03T11:22:13,888 config = read_configuration(filepath, True, ignore_option_errors, dist) 2023-08-03T11:22:14,229 running bdist_wheel 2023-08-03T11:22:14,251 running build 2023-08-03T11:22:14,251 running build_py 2023-08-03T11:22:14,258 creating build 2023-08-03T11:22:14,258 creating build/lib 2023-08-03T11:22:14,259 creating build/lib/chromatinhd 2023-08-03T11:22:14,260 copying src/chromatinhd/flow.py -> build/lib/chromatinhd 2023-08-03T11:22:14,263 copying src/chromatinhd/sparse.py -> build/lib/chromatinhd 2023-08-03T11:22:14,266 copying src/chromatinhd/optim.py -> build/lib/chromatinhd 2023-08-03T11:22:14,267 copying src/chromatinhd/__init__.py -> build/lib/chromatinhd 2023-08-03T11:22:14,269 copying src/chromatinhd/device.py -> build/lib/chromatinhd 2023-08-03T11:22:14,271 copying src/chromatinhd/embedding.py -> build/lib/chromatinhd 2023-08-03T11:22:14,272 copying src/chromatinhd/train.py -> build/lib/chromatinhd 2023-08-03T11:22:14,275 copying src/chromatinhd/loss.py -> build/lib/chromatinhd 2023-08-03T11:22:14,277 creating build/lib/chromatinhd/plot 2023-08-03T11:22:14,278 copying src/chromatinhd/plot/tickers.py -> build/lib/chromatinhd/plot 2023-08-03T11:22:14,280 copying src/chromatinhd/plot/__init__.py -> build/lib/chromatinhd/plot 2023-08-03T11:22:14,282 copying src/chromatinhd/plot/quasirandom.py -> build/lib/chromatinhd/plot 2023-08-03T11:22:14,284 copying src/chromatinhd/plot/patch.py -> build/lib/chromatinhd/plot 2023-08-03T11:22:14,286 copying src/chromatinhd/plot/matshow45.py -> build/lib/chromatinhd/plot 2023-08-03T11:22:14,288 creating build/lib/chromatinhd/models 2023-08-03T11:22:14,289 copying src/chromatinhd/models/__init__.py -> build/lib/chromatinhd/models 2023-08-03T11:22:14,292 creating build/lib/chromatinhd/utils 2023-08-03T11:22:14,294 copying src/chromatinhd/utils/torch.py -> build/lib/chromatinhd/utils 2023-08-03T11:22:14,296 copying src/chromatinhd/utils/numpy.py -> build/lib/chromatinhd/utils 2023-08-03T11:22:14,298 copying src/chromatinhd/utils/__init__.py -> build/lib/chromatinhd/utils 2023-08-03T11:22:14,300 copying src/chromatinhd/utils/ecdf.py -> build/lib/chromatinhd/utils 2023-08-03T11:22:14,302 copying src/chromatinhd/utils/ansi.py -> build/lib/chromatinhd/utils 2023-08-03T11:22:14,303 copying src/chromatinhd/utils/testing.py -> build/lib/chromatinhd/utils 2023-08-03T11:22:14,306 creating build/lib/chromatinhd/grid 2023-08-03T11:22:14,307 copying src/chromatinhd/grid/grid.py -> build/lib/chromatinhd/grid 2023-08-03T11:22:14,309 copying src/chromatinhd/grid/__init__.py -> build/lib/chromatinhd/grid 2023-08-03T11:22:14,311 copying src/chromatinhd/grid/broken.py -> build/lib/chromatinhd/grid 2023-08-03T11:22:14,313 creating build/lib/chromatinhd/data 2023-08-03T11:22:14,314 copying src/chromatinhd/data/__init__.py -> build/lib/chromatinhd/data 2023-08-03T11:22:14,316 copying src/chromatinhd/data/regions.py -> build/lib/chromatinhd/data 2023-08-03T11:22:14,318 creating build/lib/chromatinhd/biomart 2023-08-03T11:22:14,319 copying src/chromatinhd/biomart/cache.py -> build/lib/chromatinhd/biomart 2023-08-03T11:22:14,321 copying src/chromatinhd/biomart/dataset.py -> build/lib/chromatinhd/biomart 2023-08-03T11:22:14,323 copying src/chromatinhd/biomart/__init__.py -> build/lib/chromatinhd/biomart 2023-08-03T11:22:14,325 copying src/chromatinhd/biomart/tss.py -> build/lib/chromatinhd/biomart 2023-08-03T11:22:14,327 creating build/lib/chromatinhd/loaders 2023-08-03T11:22:14,328 copying src/chromatinhd/loaders/minibatching.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,330 copying src/chromatinhd/loaders/chunkfragments.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,332 copying src/chromatinhd/loaders/__init__.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,334 copying src/chromatinhd/loaders/fragmentmotif.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,336 copying src/chromatinhd/loaders/peakcounts.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,338 copying src/chromatinhd/loaders/fragments.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,340 copying src/chromatinhd/loaders/setup.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,342 copying src/chromatinhd/loaders/pool.py -> build/lib/chromatinhd/loaders 2023-08-03T11:22:14,344 creating build/lib/chromatinhd/plot/genome 2023-08-03T11:22:14,345 copying src/chromatinhd/plot/genome/__init__.py -> build/lib/chromatinhd/plot/genome 2023-08-03T11:22:14,347 copying src/chromatinhd/plot/genome/genes.py -> build/lib/chromatinhd/plot/genome 2023-08-03T11:22:14,350 creating build/lib/chromatinhd/models/pred 2023-08-03T11:22:14,350 copying src/chromatinhd/models/pred/__init__.py -> build/lib/chromatinhd/models/pred 2023-08-03T11:22:14,353 creating build/lib/chromatinhd/models/diff 2023-08-03T11:22:14,353 copying src/chromatinhd/models/diff/differential.py -> build/lib/chromatinhd/models/diff 2023-08-03T11:22:14,356 copying src/chromatinhd/models/diff/__init__.py -> build/lib/chromatinhd/models/diff 2023-08-03T11:22:14,358 creating build/lib/chromatinhd/models/pred/model 2023-08-03T11:22:14,359 copying src/chromatinhd/models/pred/model/additive.py -> build/lib/chromatinhd/models/pred/model 2023-08-03T11:22:14,362 copying src/chromatinhd/models/pred/model/across.py -> build/lib/chromatinhd/models/pred/model 2023-08-03T11:22:14,364 copying src/chromatinhd/models/pred/model/__init__.py -> build/lib/chromatinhd/models/pred/model 2023-08-03T11:22:14,366 copying src/chromatinhd/models/pred/model/loss.py -> build/lib/chromatinhd/models/pred/model 2023-08-03T11:22:14,368 creating build/lib/chromatinhd/models/pred/plot 2023-08-03T11:22:14,369 copying src/chromatinhd/models/pred/plot/effect.py -> build/lib/chromatinhd/models/pred/plot 2023-08-03T11:22:14,371 copying src/chromatinhd/models/pred/plot/__init__.py -> build/lib/chromatinhd/models/pred/plot 2023-08-03T11:22:14,372 copying src/chromatinhd/models/pred/plot/predictivity.py -> build/lib/chromatinhd/models/pred/plot 2023-08-03T11:22:14,374 copying src/chromatinhd/models/pred/plot/copredictivity.py -> build/lib/chromatinhd/models/pred/plot 2023-08-03T11:22:14,377 creating build/lib/chromatinhd/models/pred/trainer 2023-08-03T11:22:14,377 copying src/chromatinhd/models/pred/trainer/trainer.py -> build/lib/chromatinhd/models/pred/trainer 2023-08-03T11:22:14,380 copying src/chromatinhd/models/pred/trainer/__init__.py -> build/lib/chromatinhd/models/pred/trainer 2023-08-03T11:22:14,382 creating build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,383 copying src/chromatinhd/models/pred/loader/transcriptome.py -> build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,384 copying src/chromatinhd/models/pred/loader/transcriptome_fragments.py -> build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,386 copying src/chromatinhd/models/pred/loader/__init__.py -> build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,387 copying src/chromatinhd/models/pred/loader/minibatches.py -> build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,389 copying src/chromatinhd/models/pred/loader/fragments.py -> build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,392 creating build/lib/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,393 copying src/chromatinhd/models/pred/interpret/genemultiwindow.py -> build/lib/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,395 copying src/chromatinhd/models/pred/interpret/__init__.py -> build/lib/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,397 copying src/chromatinhd/models/pred/interpret/genepairwindow.py -> build/lib/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,399 copying src/chromatinhd/models/pred/interpret/censorers.py -> build/lib/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,400 copying src/chromatinhd/models/pred/interpret/filter.py -> build/lib/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,402 creating build/lib/chromatinhd/models/diff/model 2023-08-03T11:22:14,403 copying src/chromatinhd/models/diff/model/cutnf.py -> build/lib/chromatinhd/models/diff/model 2023-08-03T11:22:14,406 copying src/chromatinhd/models/diff/model/__init__.py -> build/lib/chromatinhd/models/diff/model 2023-08-03T11:22:14,407 copying src/chromatinhd/models/diff/model/spline.py -> build/lib/chromatinhd/models/diff/model 2023-08-03T11:22:14,410 creating build/lib/chromatinhd/models/diff/plot 2023-08-03T11:22:14,411 copying src/chromatinhd/models/diff/plot/differential.py -> build/lib/chromatinhd/models/diff/plot 2023-08-03T11:22:14,413 copying src/chromatinhd/models/diff/plot/__init__.py -> build/lib/chromatinhd/models/diff/plot 2023-08-03T11:22:14,416 copying src/chromatinhd/models/diff/plot/differential_expression.py -> build/lib/chromatinhd/models/diff/plot 2023-08-03T11:22:14,418 creating build/lib/chromatinhd/models/diff/trainer 2023-08-03T11:22:14,419 copying src/chromatinhd/models/diff/trainer/trainer.py -> build/lib/chromatinhd/models/diff/trainer 2023-08-03T11:22:14,421 copying src/chromatinhd/models/diff/trainer/__init__.py -> build/lib/chromatinhd/models/diff/trainer 2023-08-03T11:22:14,424 creating build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,425 copying src/chromatinhd/models/diff/loader/clustering.py -> build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,426 copying src/chromatinhd/models/diff/loader/cuts.py -> build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,429 copying src/chromatinhd/models/diff/loader/clustering_cuts.py -> build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,430 copying src/chromatinhd/models/diff/loader/__init__.py -> build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,432 copying src/chromatinhd/models/diff/loader/minibatches.py -> build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,434 creating build/lib/chromatinhd/models/diff/enrichment 2023-08-03T11:22:14,435 copying src/chromatinhd/models/diff/enrichment/enrichment.py -> build/lib/chromatinhd/models/diff/enrichment 2023-08-03T11:22:14,438 copying src/chromatinhd/models/diff/enrichment/__init__.py -> build/lib/chromatinhd/models/diff/enrichment 2023-08-03T11:22:14,440 creating build/lib/chromatinhd/models/diff/interpret 2023-08-03T11:22:14,441 copying src/chromatinhd/models/diff/interpret/genepositional.py -> build/lib/chromatinhd/models/diff/interpret 2023-08-03T11:22:14,443 copying src/chromatinhd/models/diff/interpret/__init__.py -> build/lib/chromatinhd/models/diff/interpret 2023-08-03T11:22:14,445 creating build/lib/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,446 copying src/chromatinhd/models/diff/model/splines/linear.py -> build/lib/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,448 copying src/chromatinhd/models/diff/model/splines/__init__.py -> build/lib/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,449 copying src/chromatinhd/models/diff/model/splines/cubic.py -> build/lib/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,451 copying src/chromatinhd/models/diff/model/splines/quadratic.py -> build/lib/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,454 creating build/lib/chromatinhd/data/clustering 2023-08-03T11:22:14,456 copying src/chromatinhd/data/clustering/clustering.py -> build/lib/chromatinhd/data/clustering 2023-08-03T11:22:14,457 copying src/chromatinhd/data/clustering/__init__.py -> build/lib/chromatinhd/data/clustering 2023-08-03T11:22:14,460 creating build/lib/chromatinhd/data/genotype 2023-08-03T11:22:14,461 copying src/chromatinhd/data/genotype/__init__.py -> build/lib/chromatinhd/data/genotype 2023-08-03T11:22:14,463 copying src/chromatinhd/data/genotype/genotype.py -> build/lib/chromatinhd/data/genotype 2023-08-03T11:22:14,465 creating build/lib/chromatinhd/data/transcriptome 2023-08-03T11:22:14,466 copying src/chromatinhd/data/transcriptome/transcriptome.py -> build/lib/chromatinhd/data/transcriptome 2023-08-03T11:22:14,468 copying src/chromatinhd/data/transcriptome/__init__.py -> build/lib/chromatinhd/data/transcriptome 2023-08-03T11:22:14,470 creating build/lib/chromatinhd/data/folds 2023-08-03T11:22:14,471 copying src/chromatinhd/data/folds/folds.py -> build/lib/chromatinhd/data/folds 2023-08-03T11:22:14,474 copying src/chromatinhd/data/folds/__init__.py -> build/lib/chromatinhd/data/folds 2023-08-03T11:22:14,476 creating build/lib/chromatinhd/data/fragments 2023-08-03T11:22:14,477 copying src/chromatinhd/data/fragments/__init__.py -> build/lib/chromatinhd/data/fragments 2023-08-03T11:22:14,480 copying src/chromatinhd/data/fragments/fragments.py -> build/lib/chromatinhd/data/fragments 2023-08-03T11:22:14,483 creating build/lib/chromatinhd/data/motifscan 2023-08-03T11:22:14,483 copying src/chromatinhd/data/motifscan/motiftrack.py -> build/lib/chromatinhd/data/motifscan 2023-08-03T11:22:14,485 copying src/chromatinhd/data/motifscan/motifscan.py -> build/lib/chromatinhd/data/motifscan 2023-08-03T11:22:14,487 copying src/chromatinhd/data/motifscan/__init__.py -> build/lib/chromatinhd/data/motifscan 2023-08-03T11:22:14,489 creating build/lib/chromatinhd/data/peakcounts 2023-08-03T11:22:14,490 copying src/chromatinhd/data/peakcounts/__init__.py -> build/lib/chromatinhd/data/peakcounts 2023-08-03T11:22:14,492 copying src/chromatinhd/data/peakcounts/peakcounts.py -> build/lib/chromatinhd/data/peakcounts 2023-08-03T11:22:14,496 running egg_info 2023-08-03T11:22:14,508 writing src/chromatinhd.egg-info/PKG-INFO 2023-08-03T11:22:14,510 writing dependency_links to src/chromatinhd.egg-info/dependency_links.txt 2023-08-03T11:22:14,511 writing requirements to src/chromatinhd.egg-info/requires.txt 2023-08-03T11:22:14,513 writing top-level names to src/chromatinhd.egg-info/top_level.txt 2023-08-03T11:22:14,559 listing git files failed - pretending there aren't any 2023-08-03T11:22:14,567 reading manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:14,572 adding license file 'LICENSE.md' 2023-08-03T11:22:14,581 writing manifest file 'src/chromatinhd.egg-info/SOURCES.txt' 2023-08-03T11:22:14,591 copying src/chromatinhd/models/pred/loader/fragments_helpers.pyx -> build/lib/chromatinhd/models/pred/loader 2023-08-03T11:22:14,593 copying src/chromatinhd/models/diff/loader/fragments_helpers.pyx -> build/lib/chromatinhd/models/diff/loader 2023-08-03T11:22:14,595 creating build/lib/chromatinhd/data/examples 2023-08-03T11:22:14,595 creating build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,597 copying src/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz -> build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,628 copying src/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz.tbi -> build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,631 copying src/chromatinhd/data/examples/pbmc10ktiny/transcriptome.h5ad -> build/lib/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,670 creating build/lib/chromatinhd/loaders/extraction 2023-08-03T11:22:14,671 copying src/chromatinhd/loaders/extraction/fragments.pyx -> build/lib/chromatinhd/loaders/extraction 2023-08-03T11:22:14,674 copying src/chromatinhd/loaders/extraction/motifs.pyx -> build/lib/chromatinhd/loaders/extraction 2023-08-03T11:22:14,705 installing to build/bdist.linux-armv7l/wheel 2023-08-03T11:22:14,706 running install 2023-08-03T11:22:14,731 running install_lib 2023-08-03T11:22:14,737 creating build/bdist.linux-armv7l 2023-08-03T11:22:14,738 creating build/bdist.linux-armv7l/wheel 2023-08-03T11:22:14,739 creating build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:14,740 copying build/lib/chromatinhd/flow.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:14,743 creating build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-08-03T11:22:14,744 copying build/lib/chromatinhd/plot/tickers.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-08-03T11:22:14,746 creating build/bdist.linux-armv7l/wheel/chromatinhd/plot/genome 2023-08-03T11:22:14,747 copying build/lib/chromatinhd/plot/genome/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot/genome 2023-08-03T11:22:14,749 copying build/lib/chromatinhd/plot/genome/genes.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot/genome 2023-08-03T11:22:14,751 copying build/lib/chromatinhd/plot/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-08-03T11:22:14,753 copying build/lib/chromatinhd/plot/quasirandom.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-08-03T11:22:14,754 copying build/lib/chromatinhd/plot/patch.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-08-03T11:22:14,756 copying build/lib/chromatinhd/plot/matshow45.py -> build/bdist.linux-armv7l/wheel/chromatinhd/plot 2023-08-03T11:22:14,758 creating build/bdist.linux-armv7l/wheel/chromatinhd/models 2023-08-03T11:22:14,759 copying build/lib/chromatinhd/models/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models 2023-08-03T11:22:14,761 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred 2023-08-03T11:22:14,763 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-08-03T11:22:14,764 copying build/lib/chromatinhd/models/pred/model/additive.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-08-03T11:22:14,766 copying build/lib/chromatinhd/models/pred/model/across.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-08-03T11:22:14,769 copying build/lib/chromatinhd/models/pred/model/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-08-03T11:22:14,771 copying build/lib/chromatinhd/models/pred/model/loss.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/model 2023-08-03T11:22:14,774 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-08-03T11:22:14,775 copying build/lib/chromatinhd/models/pred/plot/effect.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-08-03T11:22:14,777 copying build/lib/chromatinhd/models/pred/plot/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-08-03T11:22:14,779 copying build/lib/chromatinhd/models/pred/plot/predictivity.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-08-03T11:22:14,781 copying build/lib/chromatinhd/models/pred/plot/copredictivity.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/plot 2023-08-03T11:22:14,784 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/trainer 2023-08-03T11:22:14,785 copying build/lib/chromatinhd/models/pred/trainer/trainer.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/trainer 2023-08-03T11:22:14,787 copying build/lib/chromatinhd/models/pred/trainer/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/trainer 2023-08-03T11:22:14,790 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,791 copying build/lib/chromatinhd/models/pred/loader/transcriptome.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,793 copying build/lib/chromatinhd/models/pred/loader/transcriptome_fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,795 copying build/lib/chromatinhd/models/pred/loader/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,797 copying build/lib/chromatinhd/models/pred/loader/fragments_helpers.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,799 copying build/lib/chromatinhd/models/pred/loader/minibatches.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,801 copying build/lib/chromatinhd/models/pred/loader/fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/loader 2023-08-03T11:22:14,804 copying build/lib/chromatinhd/models/pred/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred 2023-08-03T11:22:14,806 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,807 copying build/lib/chromatinhd/models/pred/interpret/genemultiwindow.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,810 copying build/lib/chromatinhd/models/pred/interpret/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,812 copying build/lib/chromatinhd/models/pred/interpret/genepairwindow.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,814 copying build/lib/chromatinhd/models/pred/interpret/censorers.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,816 copying build/lib/chromatinhd/models/pred/interpret/filter.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/pred/interpret 2023-08-03T11:22:14,819 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff 2023-08-03T11:22:14,820 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-08-03T11:22:14,822 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,823 copying build/lib/chromatinhd/models/diff/model/splines/linear.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,826 copying build/lib/chromatinhd/models/diff/model/splines/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,827 copying build/lib/chromatinhd/models/diff/model/splines/cubic.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,830 copying build/lib/chromatinhd/models/diff/model/splines/quadratic.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model/splines 2023-08-03T11:22:14,832 copying build/lib/chromatinhd/models/diff/model/cutnf.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-08-03T11:22:14,835 copying build/lib/chromatinhd/models/diff/model/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-08-03T11:22:14,837 copying build/lib/chromatinhd/models/diff/model/spline.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/model 2023-08-03T11:22:14,840 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-08-03T11:22:14,841 copying build/lib/chromatinhd/models/diff/plot/differential.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-08-03T11:22:14,844 copying build/lib/chromatinhd/models/diff/plot/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-08-03T11:22:14,846 copying build/lib/chromatinhd/models/diff/plot/differential_expression.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/plot 2023-08-03T11:22:14,849 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/trainer 2023-08-03T11:22:14,850 copying build/lib/chromatinhd/models/diff/trainer/trainer.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/trainer 2023-08-03T11:22:14,852 copying build/lib/chromatinhd/models/diff/trainer/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/trainer 2023-08-03T11:22:14,855 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,857 copying build/lib/chromatinhd/models/diff/loader/clustering.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,859 copying build/lib/chromatinhd/models/diff/loader/cuts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,861 copying build/lib/chromatinhd/models/diff/loader/clustering_cuts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,863 copying build/lib/chromatinhd/models/diff/loader/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,865 copying build/lib/chromatinhd/models/diff/loader/fragments_helpers.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,867 copying build/lib/chromatinhd/models/diff/loader/minibatches.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/loader 2023-08-03T11:22:14,869 copying build/lib/chromatinhd/models/diff/differential.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff 2023-08-03T11:22:14,872 copying build/lib/chromatinhd/models/diff/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff 2023-08-03T11:22:14,874 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/enrichment 2023-08-03T11:22:14,875 copying build/lib/chromatinhd/models/diff/enrichment/enrichment.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/enrichment 2023-08-03T11:22:14,878 copying build/lib/chromatinhd/models/diff/enrichment/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/enrichment 2023-08-03T11:22:14,881 creating build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/interpret 2023-08-03T11:22:14,882 copying build/lib/chromatinhd/models/diff/interpret/genepositional.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/interpret 2023-08-03T11:22:14,884 copying build/lib/chromatinhd/models/diff/interpret/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/models/diff/interpret 2023-08-03T11:22:14,886 copying build/lib/chromatinhd/sparse.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:14,889 creating build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,890 copying build/lib/chromatinhd/utils/torch.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,892 copying build/lib/chromatinhd/utils/numpy.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,894 copying build/lib/chromatinhd/utils/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,896 copying build/lib/chromatinhd/utils/ecdf.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,898 copying build/lib/chromatinhd/utils/ansi.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,900 copying build/lib/chromatinhd/utils/testing.py -> build/bdist.linux-armv7l/wheel/chromatinhd/utils 2023-08-03T11:22:14,903 creating build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-08-03T11:22:14,904 copying build/lib/chromatinhd/grid/grid.py -> build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-08-03T11:22:14,907 copying build/lib/chromatinhd/grid/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-08-03T11:22:14,908 copying build/lib/chromatinhd/grid/broken.py -> build/bdist.linux-armv7l/wheel/chromatinhd/grid 2023-08-03T11:22:14,911 creating build/bdist.linux-armv7l/wheel/chromatinhd/data 2023-08-03T11:22:14,913 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/examples 2023-08-03T11:22:14,914 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,915 copying build/lib/chromatinhd/data/examples/pbmc10ktiny/transcriptome.h5ad -> build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,969 copying build/lib/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz.tbi -> build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:14,971 copying build/lib/chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz -> build/bdist.linux-armv7l/wheel/chromatinhd/data/examples/pbmc10ktiny 2023-08-03T11:22:15,012 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/clustering 2023-08-03T11:22:15,013 copying build/lib/chromatinhd/data/clustering/clustering.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/clustering 2023-08-03T11:22:15,015 copying build/lib/chromatinhd/data/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/clustering 2023-08-03T11:22:15,018 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/genotype 2023-08-03T11:22:15,019 copying build/lib/chromatinhd/data/genotype/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/genotype 2023-08-03T11:22:15,021 copying build/lib/chromatinhd/data/genotype/genotype.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/genotype 2023-08-03T11:22:15,023 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/transcriptome 2023-08-03T11:22:15,024 copying build/lib/chromatinhd/data/transcriptome/transcriptome.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/transcriptome 2023-08-03T11:22:15,027 copying build/lib/chromatinhd/data/transcriptome/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/transcriptome 2023-08-03T11:22:15,029 copying build/lib/chromatinhd/data/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data 2023-08-03T11:22:15,031 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/folds 2023-08-03T11:22:15,033 copying build/lib/chromatinhd/data/folds/folds.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/folds 2023-08-03T11:22:15,035 copying build/lib/chromatinhd/data/folds/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/folds 2023-08-03T11:22:15,037 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/fragments 2023-08-03T11:22:15,038 copying build/lib/chromatinhd/data/fragments/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/fragments 2023-08-03T11:22:15,040 copying build/lib/chromatinhd/data/fragments/fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/fragments 2023-08-03T11:22:15,043 copying build/lib/chromatinhd/data/regions.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data 2023-08-03T11:22:15,045 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-08-03T11:22:15,046 copying build/lib/chromatinhd/data/motifscan/motiftrack.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-08-03T11:22:15,048 copying build/lib/chromatinhd/data/motifscan/motifscan.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-08-03T11:22:15,050 copying build/lib/chromatinhd/data/motifscan/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/motifscan 2023-08-03T11:22:15,053 creating build/bdist.linux-armv7l/wheel/chromatinhd/data/peakcounts 2023-08-03T11:22:15,054 copying build/lib/chromatinhd/data/peakcounts/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/peakcounts 2023-08-03T11:22:15,056 copying build/lib/chromatinhd/data/peakcounts/peakcounts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/data/peakcounts 2023-08-03T11:22:15,058 copying build/lib/chromatinhd/optim.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:15,060 copying build/lib/chromatinhd/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:15,062 copying build/lib/chromatinhd/device.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:15,065 creating build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-08-03T11:22:15,066 copying build/lib/chromatinhd/biomart/cache.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-08-03T11:22:15,068 copying build/lib/chromatinhd/biomart/dataset.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-08-03T11:22:15,071 copying build/lib/chromatinhd/biomart/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-08-03T11:22:15,072 copying build/lib/chromatinhd/biomart/tss.py -> build/bdist.linux-armv7l/wheel/chromatinhd/biomart 2023-08-03T11:22:15,075 copying build/lib/chromatinhd/embedding.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:15,077 copying build/lib/chromatinhd/train.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:15,080 creating build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,081 creating build/bdist.linux-armv7l/wheel/chromatinhd/loaders/extraction 2023-08-03T11:22:15,083 copying build/lib/chromatinhd/loaders/extraction/motifs.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders/extraction 2023-08-03T11:22:15,085 copying build/lib/chromatinhd/loaders/extraction/fragments.pyx -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders/extraction 2023-08-03T11:22:15,088 copying build/lib/chromatinhd/loaders/minibatching.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,090 copying build/lib/chromatinhd/loaders/chunkfragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,093 copying build/lib/chromatinhd/loaders/__init__.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,095 copying build/lib/chromatinhd/loaders/fragmentmotif.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,098 copying build/lib/chromatinhd/loaders/peakcounts.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,100 copying build/lib/chromatinhd/loaders/fragments.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,102 copying build/lib/chromatinhd/loaders/setup.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,104 copying build/lib/chromatinhd/loaders/pool.py -> build/bdist.linux-armv7l/wheel/chromatinhd/loaders 2023-08-03T11:22:15,107 copying build/lib/chromatinhd/loss.py -> build/bdist.linux-armv7l/wheel/chromatinhd 2023-08-03T11:22:15,109 running install_egg_info 2023-08-03T11:22:15,115 Copying src/chromatinhd.egg-info to build/bdist.linux-armv7l/wheel/chromatinhd-0.0.19-py3.9.egg-info 2023-08-03T11:22:15,126 running install_scripts 2023-08-03T11:22:15,146 creating build/bdist.linux-armv7l/wheel/chromatinhd-0.0.19.dist-info/WHEEL 2023-08-03T11:22:15,150 creating '/tmp/pip-wheel-4ddexsus/.tmp-3koxxoqr/chromatinhd-0.0.19-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-03T11:22:15,152 adding 'chromatinhd/__init__.py' 2023-08-03T11:22:15,154 adding 'chromatinhd/device.py' 2023-08-03T11:22:15,156 adding 'chromatinhd/embedding.py' 2023-08-03T11:22:15,158 adding 'chromatinhd/flow.py' 2023-08-03T11:22:15,159 adding 'chromatinhd/loss.py' 2023-08-03T11:22:15,161 adding 'chromatinhd/optim.py' 2023-08-03T11:22:15,163 adding 'chromatinhd/sparse.py' 2023-08-03T11:22:15,165 adding 'chromatinhd/train.py' 2023-08-03T11:22:15,167 adding 'chromatinhd/biomart/__init__.py' 2023-08-03T11:22:15,168 adding 'chromatinhd/biomart/cache.py' 2023-08-03T11:22:15,170 adding 'chromatinhd/biomart/dataset.py' 2023-08-03T11:22:15,172 adding 'chromatinhd/biomart/tss.py' 2023-08-03T11:22:15,174 adding 'chromatinhd/data/__init__.py' 2023-08-03T11:22:15,176 adding 'chromatinhd/data/regions.py' 2023-08-03T11:22:15,178 adding 'chromatinhd/data/clustering/__init__.py' 2023-08-03T11:22:15,179 adding 'chromatinhd/data/clustering/clustering.py' 2023-08-03T11:22:15,409 adding 'chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz' 2023-08-03T11:22:15,424 adding 'chromatinhd/data/examples/pbmc10ktiny/fragments.tsv.gz.tbi' 2023-08-03T11:22:15,732 adding 'chromatinhd/data/examples/pbmc10ktiny/transcriptome.h5ad' 2023-08-03T11:22:15,750 adding 'chromatinhd/data/folds/__init__.py' 2023-08-03T11:22:15,752 adding 'chromatinhd/data/folds/folds.py' 2023-08-03T11:22:15,754 adding 'chromatinhd/data/fragments/__init__.py' 2023-08-03T11:22:15,756 adding 'chromatinhd/data/fragments/fragments.py' 2023-08-03T11:22:15,758 adding 'chromatinhd/data/genotype/__init__.py' 2023-08-03T11:22:15,759 adding 'chromatinhd/data/genotype/genotype.py' 2023-08-03T11:22:15,761 adding 'chromatinhd/data/motifscan/__init__.py' 2023-08-03T11:22:15,763 adding 'chromatinhd/data/motifscan/motifscan.py' 2023-08-03T11:22:15,764 adding 'chromatinhd/data/motifscan/motiftrack.py' 2023-08-03T11:22:15,766 adding 'chromatinhd/data/peakcounts/__init__.py' 2023-08-03T11:22:15,768 adding 'chromatinhd/data/peakcounts/peakcounts.py' 2023-08-03T11:22:15,770 adding 'chromatinhd/data/transcriptome/__init__.py' 2023-08-03T11:22:15,772 adding 'chromatinhd/data/transcriptome/transcriptome.py' 2023-08-03T11:22:15,774 adding 'chromatinhd/grid/__init__.py' 2023-08-03T11:22:15,775 adding 'chromatinhd/grid/broken.py' 2023-08-03T11:22:15,778 adding 'chromatinhd/grid/grid.py' 2023-08-03T11:22:15,780 adding 'chromatinhd/loaders/__init__.py' 2023-08-03T11:22:15,782 adding 'chromatinhd/loaders/chunkfragments.py' 2023-08-03T11:22:15,783 adding 'chromatinhd/loaders/fragmentmotif.py' 2023-08-03T11:22:15,785 adding 'chromatinhd/loaders/fragments.py' 2023-08-03T11:22:15,787 adding 'chromatinhd/loaders/minibatching.py' 2023-08-03T11:22:15,789 adding 'chromatinhd/loaders/peakcounts.py' 2023-08-03T11:22:15,791 adding 'chromatinhd/loaders/pool.py' 2023-08-03T11:22:15,792 adding 'chromatinhd/loaders/setup.py' 2023-08-03T11:22:15,795 adding 'chromatinhd/loaders/extraction/fragments.pyx' 2023-08-03T11:22:15,797 adding 'chromatinhd/loaders/extraction/motifs.pyx' 2023-08-03T11:22:15,799 adding 'chromatinhd/models/__init__.py' 2023-08-03T11:22:15,801 adding 'chromatinhd/models/diff/__init__.py' 2023-08-03T11:22:15,804 adding 'chromatinhd/models/diff/differential.py' 2023-08-03T11:22:15,806 adding 'chromatinhd/models/diff/enrichment/__init__.py' 2023-08-03T11:22:15,808 adding 'chromatinhd/models/diff/enrichment/enrichment.py' 2023-08-03T11:22:15,810 adding 'chromatinhd/models/diff/interpret/__init__.py' 2023-08-03T11:22:15,812 adding 'chromatinhd/models/diff/interpret/genepositional.py' 2023-08-03T11:22:15,814 adding 'chromatinhd/models/diff/loader/__init__.py' 2023-08-03T11:22:15,816 adding 'chromatinhd/models/diff/loader/clustering.py' 2023-08-03T11:22:15,817 adding 'chromatinhd/models/diff/loader/clustering_cuts.py' 2023-08-03T11:22:15,819 adding 'chromatinhd/models/diff/loader/cuts.py' 2023-08-03T11:22:15,821 adding 'chromatinhd/models/diff/loader/fragments_helpers.pyx' 2023-08-03T11:22:15,822 adding 'chromatinhd/models/diff/loader/minibatches.py' 2023-08-03T11:22:15,824 adding 'chromatinhd/models/diff/model/__init__.py' 2023-08-03T11:22:15,827 adding 'chromatinhd/models/diff/model/cutnf.py' 2023-08-03T11:22:15,830 adding 'chromatinhd/models/diff/model/spline.py' 2023-08-03T11:22:15,832 adding 'chromatinhd/models/diff/model/splines/__init__.py' 2023-08-03T11:22:15,834 adding 'chromatinhd/models/diff/model/splines/cubic.py' 2023-08-03T11:22:15,836 adding 'chromatinhd/models/diff/model/splines/linear.py' 2023-08-03T11:22:15,837 adding 'chromatinhd/models/diff/model/splines/quadratic.py' 2023-08-03T11:22:15,840 adding 'chromatinhd/models/diff/plot/__init__.py' 2023-08-03T11:22:15,842 adding 'chromatinhd/models/diff/plot/differential.py' 2023-08-03T11:22:15,844 adding 'chromatinhd/models/diff/plot/differential_expression.py' 2023-08-03T11:22:15,846 adding 'chromatinhd/models/diff/trainer/__init__.py' 2023-08-03T11:22:15,848 adding 'chromatinhd/models/diff/trainer/trainer.py' 2023-08-03T11:22:15,850 adding 'chromatinhd/models/pred/__init__.py' 2023-08-03T11:22:15,852 adding 'chromatinhd/models/pred/interpret/__init__.py' 2023-08-03T11:22:15,853 adding 'chromatinhd/models/pred/interpret/censorers.py' 2023-08-03T11:22:15,855 adding 'chromatinhd/models/pred/interpret/filter.py' 2023-08-03T11:22:15,856 adding 'chromatinhd/models/pred/interpret/genemultiwindow.py' 2023-08-03T11:22:15,858 adding 'chromatinhd/models/pred/interpret/genepairwindow.py' 2023-08-03T11:22:15,860 adding 'chromatinhd/models/pred/loader/__init__.py' 2023-08-03T11:22:15,862 adding 'chromatinhd/models/pred/loader/fragments.py' 2023-08-03T11:22:15,864 adding 'chromatinhd/models/pred/loader/fragments_helpers.pyx' 2023-08-03T11:22:15,866 adding 'chromatinhd/models/pred/loader/minibatches.py' 2023-08-03T11:22:15,867 adding 'chromatinhd/models/pred/loader/transcriptome.py' 2023-08-03T11:22:15,869 adding 'chromatinhd/models/pred/loader/transcriptome_fragments.py' 2023-08-03T11:22:15,871 adding 'chromatinhd/models/pred/model/__init__.py' 2023-08-03T11:22:15,874 adding 'chromatinhd/models/pred/model/across.py' 2023-08-03T11:22:15,877 adding 'chromatinhd/models/pred/model/additive.py' 2023-08-03T11:22:15,878 adding 'chromatinhd/models/pred/model/loss.py' 2023-08-03T11:22:15,880 adding 'chromatinhd/models/pred/plot/__init__.py' 2023-08-03T11:22:15,882 adding 'chromatinhd/models/pred/plot/copredictivity.py' 2023-08-03T11:22:15,883 adding 'chromatinhd/models/pred/plot/effect.py' 2023-08-03T11:22:15,885 adding 'chromatinhd/models/pred/plot/predictivity.py' 2023-08-03T11:22:15,887 adding 'chromatinhd/models/pred/trainer/__init__.py' 2023-08-03T11:22:15,889 adding 'chromatinhd/models/pred/trainer/trainer.py' 2023-08-03T11:22:15,891 adding 'chromatinhd/plot/__init__.py' 2023-08-03T11:22:15,893 adding 'chromatinhd/plot/matshow45.py' 2023-08-03T11:22:15,894 adding 'chromatinhd/plot/patch.py' 2023-08-03T11:22:15,896 adding 'chromatinhd/plot/quasirandom.py' 2023-08-03T11:22:15,897 adding 'chromatinhd/plot/tickers.py' 2023-08-03T11:22:15,899 adding 'chromatinhd/plot/genome/__init__.py' 2023-08-03T11:22:15,901 adding 'chromatinhd/plot/genome/genes.py' 2023-08-03T11:22:15,904 adding 'chromatinhd/utils/__init__.py' 2023-08-03T11:22:15,905 adding 'chromatinhd/utils/ansi.py' 2023-08-03T11:22:15,907 adding 'chromatinhd/utils/ecdf.py' 2023-08-03T11:22:15,908 adding 'chromatinhd/utils/numpy.py' 2023-08-03T11:22:15,910 adding 'chromatinhd/utils/testing.py' 2023-08-03T11:22:15,911 adding 'chromatinhd/utils/torch.py' 2023-08-03T11:22:15,914 adding 'chromatinhd-0.0.19.dist-info/LICENSE.md' 2023-08-03T11:22:15,915 adding 'chromatinhd-0.0.19.dist-info/METADATA' 2023-08-03T11:22:15,917 adding 'chromatinhd-0.0.19.dist-info/WHEEL' 2023-08-03T11:22:15,918 adding 'chromatinhd-0.0.19.dist-info/top_level.txt' 2023-08-03T11:22:15,920 adding 'chromatinhd-0.0.19.dist-info/RECORD' 2023-08-03T11:22:15,966 removing build/bdist.linux-armv7l/wheel 2023-08-03T11:22:16,115 Building wheel for chromatinhd (pyproject.toml): finished with status 'done' 2023-08-03T11:22:16,212 Created wheel for chromatinhd: filename=chromatinhd-0.0.19-py3-none-any.whl size=4322807 sha256=eed6eff37e39bcb6380da45fa6ac7126e0a77dda84ac2c058174bbc85e951cf3 2023-08-03T11:22:16,213 Stored in directory: /tmp/pip-ephem-wheel-cache-k5mugdcb/wheels/1f/5d/13/3bb11976cb6783911436797e087fc5c71b26b6471c8f3aa652 2023-08-03T11:22:16,228 Successfully built chromatinhd 2023-08-03T11:22:16,341 Removed build tracker: '/tmp/pip-build-tracker-xtjukn0u'